BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004622
(741 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
Length = 1101
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/580 (66%), Positives = 453/580 (78%), Gaps = 5/580 (0%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MASAI+ R+ELAKLC+ R+WSKAIR+LDSLL+QS IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MASAISERVELAKLCASRDWSKAIRVLDSLLSQSCTIQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKALQLDP LLQAYILKG AFS+LGRK++AL VW++GYEHAL QSADLKQ LELEELL
Sbjct: 61 DKALQLDPMLLQAYILKGRAFSSLGRKDDALLVWQQGYEHALRQSADLKQLLELEELLKF 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
AKQ+R++ V+ S + + +E + N K +E S+N ++ SDI +S +S D SE C
Sbjct: 121 AKQERNIGLRDHVTES-TPMNTTEFATHTNGKSNEASKNRDQLSDISNSCRESGDGSEIC 179
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
SK + D N D+A G S + + + H+NGK +V NH+ D SK + SRD
Sbjct: 180 SKFGGNFDAMNVIRDKAGGESPITIPECRPHMNGKSDDVCTNHDKLGDKSKLHNESRDTY 239
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
+I S D+ I N KA + + + NGTH+ DK+S DS S N + S SKS
Sbjct: 240 KICCNSGDNCAIQNYLSRKAEGDVKTDK--NGTHNFIDKIS-DSESCNVLSDTSVPSSKS 296
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
S S D+++ R KLS K D+ E +E K++KKF VTRISK+KSI+VDFRLSRGIAQ
Sbjct: 297 STISISSGDTSDIRVKLSNKTDIPNEAGDETKKSKKFSVTRISKTKSITVDFRLSRGIAQ 356
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
VNEGKYASAISIFDQIL EDP YPEALIGRGTA AFQRELEAAI+DF++AIQSNP AGEA
Sbjct: 357 VNEGKYASAISIFDQILTEDPTYPEALIGRGTAHAFQRELEAAIADFSKAIQSNPLAGEA 416
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
WKRRGQARAALGES+EAI DL+KALEFEPNSADILHERGIVNFKFKDF+AAV+DLSACVK
Sbjct: 417 WKRRGQARAALGESIEAIHDLTKALEFEPNSADILHERGIVNFKFKDFDAAVQDLSACVK 476
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LDK+NKSAYTYLGLALSS GEYKKAEEAHLK+IQLDR+FLE W HLTQFYQDLAN KA
Sbjct: 477 LDKDNKSAYTYLGLALSSTGEYKKAEEAHLKSIQLDRSFLEGWAHLTQFYQDLANLTKAF 536
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EC++QVL ID RF+KAYHL GLLLHG+G+H+KAIK+LS G
Sbjct: 537 ECIKQVLQIDARFAKAYHLHGLLLHGMGEHRKAIKELSLG 576
>gi|225438920|ref|XP_002279290.1| PREDICTED: tetratricopeptide repeat protein 13-like [Vitis
vinifera]
Length = 1068
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/581 (64%), Positives = 445/581 (76%), Gaps = 37/581 (6%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
M SAI+ R ELAKLCS R+WSKAIR+LDSLLAQS IQDICNRAFCYS+LELHKHVIRDC
Sbjct: 1 MESAISERQELAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKHVIRDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKALQL+PTLLQAYILKG A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL
Sbjct: 61 DKALQLEPTLLQAYILKGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL-- 118
Query: 153 AKQDRSVTCE-YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETC 211
KQ+R +TCE + + + SS++VSES L+ N+K + T +N +K + D SE C
Sbjct: 119 -KQNRRITCENHAMESPESSISVSESALHVNEKPNSTHKNDSKLN---------DESELC 168
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
S+SS + I+ K +N + +D S+ S D S
Sbjct: 169 SESSDTSE-----------------------IHCKPNSTHKNDSKLNDESELCSESSDTS 205
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
EI+ ++ D D + D + NE+ ++NGT+D+ K S +S ++ N SE SKS
Sbjct: 206 EIHCKAFDTSDGHDELRDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKS 265
Query: 332 SIS-DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S+ +KSSD +E R K S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIA
Sbjct: 266 SVVIHSKSSDISEVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIA 325
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
QVNEG Y++AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA E
Sbjct: 326 QVNEGNYSNAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACE 385
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AWKRRGQARAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV
Sbjct: 386 AWKRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACV 445
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LDKENKSAYTYLGLALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KA
Sbjct: 446 QLDKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKA 505
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
LEC+++VL ID+ F+KAYHLRGLL HG+G+HKKAI DLS G
Sbjct: 506 LECIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIG 546
>gi|224071273|ref|XP_002303385.1| predicted protein [Populus trichocarpa]
gi|222840817|gb|EEE78364.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/529 (67%), Positives = 412/529 (77%), Gaps = 4/529 (0%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MASAI+ R+ELAKLCS R+WSKAIR+LDSLL QS IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MASAISERVELAKLCSSRDWSKAIRVLDSLLVQSCAIQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDPTLLQAYILKG AFS+LGRK++AL VWE+GYEHALHQSADLKQ LELEELL
Sbjct: 61 DRALQLDPTLLQAYILKGRAFSSLGRKDDALLVWEQGYEHALHQSADLKQLLELEELLKF 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
AKQDRS CE V S S+ SES + K ETS++ NK SDI + S SR+V
Sbjct: 121 AKQDRSAGCETHVVESRLSMYASES--QPHSKSDETSKHQNKLSDISNLCSGSRNVLGIH 178
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
SKS + ++ G SDE G S V +SG H N K E S+N + +SD S+ RDA
Sbjct: 179 SKSGDNFEIHKGISDEV-GRSLKLVPESGCHTNEKSSETSKNPSKASDKSELCSELRDAP 237
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
EI +S D+FD+ NG DKA N++ G N HD+ D + S S + + SE S+
Sbjct: 238 EICCKSGDNFDMDNGLSDKAEGNQKPGILVNDNHDILDLPNHVSESCSGVSNASELSSRL 297
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
S+ D++E SK S K +M E ++E K NKK CVTRISK+KSISVDFRLSRGIAQ
Sbjct: 298 SMIPGNLGDTSEILSKSSNKVNMHNEVTDETKGNKKLCVTRISKTKSISVDFRLSRGIAQ 357
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
VNEGKYA+AISIFDQILKEDP YPEALIGRGTARAF+REL +AI+DF++AI+SNPSAGEA
Sbjct: 358 VNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGSAIADFSKAIESNPSAGEA 417
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
WKRRGQARAALGES EAI DL+KALEFEPNSADILHERGIV++KFKDF+AAVEDLSACVK
Sbjct: 418 WKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDFDAAVEDLSACVK 477
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
LD +N SAYTYLGLALSSIGEYKKAEEAHLKAIQLDR+FLEAW HLTQF
Sbjct: 478 LDMDNMSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRSFLEAWAHLTQF 526
>gi|449448472|ref|XP_004141990.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
sativus]
Length = 1046
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 338/582 (58%), Positives = 411/582 (70%), Gaps = 66/582 (11%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA AI+ R+ELAK C ++WSKAIR+LDSL+A+S +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T
Sbjct: 61 DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
KQ+++ +V + S++ ESG+ + +S R+ +
Sbjct: 121 EKQEKNNVENGEVESGFSTVG-PESGVTS------------------ASKNCRETNNNVG 161
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
K PD C S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
+ SSD+ +C G ++ N ++NG D D+LS D++ L+D ++ + S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
K + +KS DST+ SK S D+ S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+KLD N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
ALECL QVL ID F KAYHLRGLL HG+G+H+KAIKDLS G
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIG 519
>gi|449520722|ref|XP_004167382.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
sativus]
Length = 1046
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 338/582 (58%), Positives = 411/582 (70%), Gaps = 66/582 (11%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA AI+ R+ELAK C ++WSKAIR+LDSL+A+S +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T
Sbjct: 61 DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
KQ+++ +V + S++ ESG+ + +S R+ +
Sbjct: 121 EKQEKNNVENGEVESRFSAVG-PESGVTS------------------ASKNCRETNNNVG 161
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
K PD C S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
+ SSD+ +C G ++ N ++NG D D+LS D++ L+D ++ + S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
K + +KS DST+ SK S D+ S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+KLD N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
ALECL QVL ID F KAYHLRGLL HG+G+H+KAIKDLS G
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIG 519
>gi|357482705|ref|XP_003611639.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512974|gb|AES94597.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 1033
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 338/584 (57%), Positives = 407/584 (69%), Gaps = 83/584 (14%)
Query: 32 VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
+ A A + R ELAKLCS ++WSKAIRILDSL++QS IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1 MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL
Sbjct: 61 CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120
Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
AKQ + SN + L++ ++ S++S N N ++ C+S S + D
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167
Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
SE KS+ D N + E GG S SK +NG + SSD S+S
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSES---- 218
Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
C+ K+ ++S +DSN +E
Sbjct: 219 ----------------CD------------------------KVLTNSGESSDSNDAAEI 238
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
K S K +F E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKPSF-------------KFTFP----SEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA+VNEGKYA AISIFDQILKED YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++G
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTG 505
>gi|357482701|ref|XP_003611637.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512972|gb|AES94595.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 1062
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 338/584 (57%), Positives = 407/584 (69%), Gaps = 83/584 (14%)
Query: 32 VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
+ A A + R ELAKLCS ++WSKAIRILDSL++QS IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1 MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL
Sbjct: 61 CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120
Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
AKQ + SN + L++ ++ S++S N N ++ C+S S + D
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167
Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
SE KS+ D N + E GG S SK +NG + SSD S+S
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSES---- 218
Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
C+ K+ ++S +DSN +E
Sbjct: 219 ----------------CD------------------------KVLTNSGESSDSNDAAEI 238
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
K S K +F E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKPSF-------------KFTFP----SEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA+VNEGKYA AISIFDQILKED YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++G
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTG 505
>gi|357482703|ref|XP_003611638.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512973|gb|AES94596.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 798
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 338/584 (57%), Positives = 407/584 (69%), Gaps = 83/584 (14%)
Query: 32 VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
+ A A + R ELAKLCS ++WSKAIRILDSL++QS IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1 MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL
Sbjct: 61 CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120
Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
AKQ + SN + L++ ++ S++S N N ++ C+S S + D
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167
Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
SE KS+ D N + E GG S SK +NG + SSD S+S
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSES---- 218
Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
C+ K+ ++S +DSN +E
Sbjct: 219 ----------------CD------------------------KVLTNSGESSDSNDAAEI 238
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
K S K +F E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKPSF-------------KFTFP----SEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA+VNEGKYA AISIFDQILKED YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++G
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTG 505
>gi|356514306|ref|XP_003525847.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1050
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 331/579 (57%), Positives = 395/579 (68%), Gaps = 78/579 (13%)
Query: 40 RIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLD 99
R++LA+LC+ ++WSKAIR+LDSL++ S IQD+CNRAFCYS+LELHKHVIRDCD+ALQLD
Sbjct: 16 RVDLARLCASKDWSKAIRVLDSLISHSNAIQDLCNRAFCYSKLELHKHVIRDCDRALQLD 75
Query: 100 PTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
PT LQAYILKG A S LGR+E AL VWE+GYEHALHQSADLKQ LELEEL+ AKQ ++
Sbjct: 76 PTRLQAYILKGSALSVLGRQENALLVWEQGYEHALHQSADLKQLLELEELIETAKQGKNT 135
Query: 160 TCEYD-------VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
CE + + S S L D + +E +C ++ D SETC
Sbjct: 136 LCESENHRPPPQTKSDSLSNGSSSETLKIQDTLGTPAE------LCGDATG--DKSETCL 187
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
S+ + DL + DE + +KS +NG
Sbjct: 188 NSADNSDLKHESHDEDRDS-----NKSDGQVNG--------------------------- 215
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSS 332
S D DI LS +S S NDS+ SES K S
Sbjct: 216 ----SPDVLDI---------------------------LSYNSESCNDSSDASESSEKVS 244
Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV 392
+ SS+ E K+ E EA++NKKFC+ +IS + SISVDFRLSRGIA+V
Sbjct: 245 TNSGDSSNIPEIFRNPISKFIFSDERKGEARKNKKFCIAQISNTNSISVDFRLSRGIAEV 304
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ NP AGEAW
Sbjct: 305 NEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFNPLAGEAW 364
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVEDLSACVKL
Sbjct: 365 KRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVEDLSACVKL 424
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
DK+N SAYTYLGLALSSIGEYKKAEEAHLK++QLD+NFLEAW HLTQFYQDLA KA E
Sbjct: 425 DKDNTSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKNFLEAWAHLTQFYQDLAKPTKAQE 484
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
C+ ++L ID RF++A HLRGLL H +G+H+KAIKDL+ G
Sbjct: 485 CINKMLQIDGRFARANHLRGLLFHAMGEHRKAIKDLTMG 523
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 168/400 (42%), Gaps = 103/400 (25%)
Query: 266 ASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNS 325
A+ D SE S+D+ D+ + D+ + + Q NG+ DV D LS +S S NDS+ S
Sbjct: 178 ATGDKSETCLNSADNSDLKHESHDEDRDSNKSDGQVNGSPDVLDILSYNSESCNDSSDAS 237
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
ES K S + SS+ E K+ E EA++NKKFC+ +IS + SISVDFRL
Sbjct: 238 ESSEKVSTNSGDSSNIPEIFRNPISKFIFSDERKGEARKNKKFCIAQISNTNSISVDFRL 297
Query: 386 SRGIAQVNEGKYA----------------------------------SAISIFDQILKED 411
SRGIA+VNEGKYA +AI+ F + ++ +
Sbjct: 298 SRGIAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFN 357
Query: 412 PMYPEALIGRGTARA-----------------FQ-----------------RELEAAISD 437
P+ EA RG ARA F+ +E +AA+ D
Sbjct: 358 PLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVED 417
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEA------------------------IQDLS 473
+ ++ + A+ G A +++GE +A QDL+
Sbjct: 418 LSACVKLDKDNTSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKNFLEAWAHLTQFYQDLA 477
Query: 474 KA----------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
K L+ + A H RG++ + A++DL+ + +D N
Sbjct: 478 KPTKAQECINKMLQIDGRFARANHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLR 537
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-HLTQFYQ 562
++G+YK+A + + A+ L+ + ++ + FYQ
Sbjct: 538 ASCYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLAFYQ 577
>gi|356496945|ref|XP_003517325.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1047
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 336/587 (57%), Positives = 404/587 (68%), Gaps = 81/587 (13%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA + R LA+LCS ++WSKAIR+LDSL++QS IQDICNRAFCYS+LELHKHVI+DC
Sbjct: 1 MAPTTSQRATLARLCSSKDWSKAIRVLDSLVSQSGAIQDICNRAFCYSRLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
+KALQLDP+ LQAYILKG A SALGRK +AL VWE+GYEHA HQSADLK LELEELLT
Sbjct: 61 NKALQLDPSRLQAYILKGHALSALGRKTDALLVWEQGYEHAQHQSADLKLLLELEELLTT 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK----SDICDSSSQSRDVS 208
KQ S E + S ++ SES ++ ++E EN ++ ++CD++S D S
Sbjct: 121 TKQGNSALYE----TNGSPVSQSESDSPSDGNLTEICENQDRLSVQDELCDNAS---DKS 173
Query: 209 ETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHING------KLREVSENHNGSSDGSK 262
KS+ + DL N + E + +KS +NG KL SE+ N SSD S+
Sbjct: 174 LILLKSADNFDLRNELNIEDRES-----NKSDSQVNGSPDVIDKLSYNSESCNDSSDTSE 228
Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
S + + SSD D+ ++ KLS
Sbjct: 229 SCDKDKVFTNSGESSSDSLDVA---------------------EILRKLS---------- 257
Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
SK +F E EA++N KFCV RISK+KSISVD
Sbjct: 258 -----------------------SKFNFP----HEKIGEARKN-KFCVARISKTKSISVD 289
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
FRLSRGI +VNEGKYA AISIFDQILKEDP YPEALIGRGTA AF+REL+AAI+DF++AI
Sbjct: 290 FRLSRGIGEVNEGKYAHAISIFDQILKEDPAYPEALIGRGTAYAFKRELDAAIADFSKAI 349
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NPSAGEAWKRRGQARAALGE VEAI+DL+ ALEFE NSADILHERGIVNFKFK+F+AA
Sbjct: 350 EFNPSAGEAWKRRGQARAALGEFVEAIEDLTMALEFESNSADILHERGIVNFKFKEFDAA 409
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
VEDLSACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++Q+DRNFLEAW HLTQFYQ
Sbjct: 410 VEDLSACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQIDRNFLEAWAHLTQFYQ 469
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL+ KA ECL Q+L ID RF++AYHLRGLL H +G+H+KAI DL+
Sbjct: 470 DLSKPTKAQECLNQMLQIDGRFARAYHLRGLLFHAMGEHRKAISDLT 516
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 188/441 (42%), Gaps = 110/441 (24%)
Query: 231 GSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDK 290
GS V S+S +G L E+ EN + S + + D S I +S+D+FD+ N +
Sbjct: 133 GSPVSQSESDSPSDGNLTEICENQDRLSVQDELCDNASDKSLILLKSADNFDLRNELNIE 192
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES------YSKSSISDNKSSDSTES 344
+ + Q NG+ DV DKLS +S S NDS+ SES ++ S S + S D E
Sbjct: 193 DRESNKSDSQVNGSPDVIDKLSYNSESCNDSSDTSESCDKDKVFTNSGESSSDSLDVAEI 252
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISI- 403
KLS K++ E EA++NK FCV RISK+KSISVDFRLSRGI +VNEGKYA AISI
Sbjct: 253 LRKLSSKFNFPHEKIGEARKNK-FCVARISKTKSISVDFRLSRGIGEVNEGKYAHAISIF 311
Query: 404 ---------------------------------FDQILKEDPMYPEALIGRGTARA---- 426
F + ++ +P EA RG ARA
Sbjct: 312 DQILKEDPAYPEALIGRGTAYAFKRELDAAIADFSKAIEFNPSAGEAWKRRGQARAALGE 371
Query: 427 -------------FQ-----------------RELEAAISDFTEAIQSNPSAGEAWKRRG 456
F+ +E +AA+ D + +Q + A+ G
Sbjct: 372 FVEAIEDLTMALEFESNSADILHERGIVNFKFKEFDAAVEDLSACVQLDRDNKSAYTYLG 431
Query: 457 QARAALGESVEA------------------------IQDLSKA----------LEFEPNS 482
A +++GE +A QDLSK L+ +
Sbjct: 432 LALSSIGEYKKAEEAHLKSLQIDRNFLEAWAHLTQFYQDLSKPTKAQECLNQMLQIDGRF 491
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A H RG++ + A+ DL+ + +D N G ++G YK+A + +
Sbjct: 492 ARAYHLRGLLFHAMGEHRKAISDLTMSLNVDGANVECLYLRGSCYHAVGRYKEAVKDYDA 551
Query: 543 AIQLDRNFLEAWG-HLTQFYQ 562
A+ L+ + ++ + FYQ
Sbjct: 552 ALDLELDSMDKFVLQCLAFYQ 572
>gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
lyrata]
gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
lyrata]
Length = 1043
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 321/588 (54%), Positives = 397/588 (67%), Gaps = 79/588 (13%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA+A + R+ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DC
Sbjct: 1 MATATSERVELAKHCSSRNWSKAIRVLDSLLAKQSSILDICNRAFCYNQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKAL L+P +QA+ILKG A ALGRK+EA+ V E+GY++AL Q+AD+KQ LELEELLT
Sbjct: 61 DKALLLEPCAIQAFILKGRALLALGRKQEAVLVLEQGYKNALQQTADVKQLLELEELLTD 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
A++ E D + S S S +D+ ++ +NH S CS
Sbjct: 121 ARR------EIDATESRQETPASHS--EKSDEKTDKLDNHE--------------SGACS 158
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
NG S H + RE+ E SK S+D S+
Sbjct: 159 ---------NGNS----------------HDHEASRELGEK-------SKIISFSKDTSK 186
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNT 323
++QS D+CNG K N + G Q NG++ D+HD L+ S L D +
Sbjct: 187 ASKQSDGSSDLCNGSAYKEKENGKCGSQINGSYESCKPCNGSDLHDNLAESSDRLGDLSI 246
Query: 324 NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF 383
N +K I +K S E+R +E ++NKK+ + RIS + SISVDF
Sbjct: 247 NG---NKLIIKSSKMSHKAEARC-------------DETRKNKKYTIARISGTHSISVDF 290
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
RLSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQ
Sbjct: 291 RLSRGIAQVNEGNYMKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQ 350
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
SNP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV
Sbjct: 351 SNPAATEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAV 410
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+
Sbjct: 411 KDLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQE 470
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
LA+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS G
Sbjct: 471 LADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIG 518
>gi|186517170|ref|NP_195462.3| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
domain-containing protein [Arabidopsis thaliana]
gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
domain-containing protein [Arabidopsis thaliana]
Length = 1052
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/587 (54%), Positives = 398/587 (67%), Gaps = 72/587 (12%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS G
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIG 527
>gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana]
gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana]
Length = 1013
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/587 (54%), Positives = 398/587 (67%), Gaps = 72/587 (12%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS G
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIG 527
>gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana]
gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana]
Length = 883
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 318/587 (54%), Positives = 398/587 (67%), Gaps = 72/587 (12%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS G
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIG 527
>gi|147795382|emb|CAN74233.1| hypothetical protein VITISV_040224 [Vitis vinifera]
Length = 527
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 297/507 (58%), Positives = 357/507 (70%), Gaps = 61/507 (12%)
Query: 106 YILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCE-YD 164
Y +G A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL KQ+R +TCE +
Sbjct: 15 YNDQGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL---KQNRRITCENHA 71
Query: 165 VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
+ + SS++VSES L+ N+K + T +N +K + D SE CS+SS
Sbjct: 72 MESPESSISVSESALHVNEKPNSTHKNDSKLN---------DESELCSESS--------- 113
Query: 225 SDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ SE H + K+ D SE+ +SSD +I
Sbjct: 114 ------------------------DTSEIHCKPNSTHKNDSKLNDESELCSESSDTSEIH 149
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
D T D HD+L D+ + N+ + + + +S+ + S S
Sbjct: 150 CKAFD--------------TSDGHDEL-RDTVNGNEKLNSESNGTMTSLLNQVMSLSYVV 194
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
R K S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIAQVNEG Y++AISIF
Sbjct: 195 RRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQVNEGNYSNAISIF 254
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
DQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAWKRRGQARAALGE
Sbjct: 255 DQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAWKRRGQARAALGE 314
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+LDKENKSAYTYLG
Sbjct: 315 SSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQLDKENKSAYTYLG 374
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
LALSSIGEY +AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KALEC+++VL ID+ F
Sbjct: 375 LALSSIGEYXRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALECIERVLQIDEGF 434
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+KAYHLRGLL HG+G+HKKAI DLS G
Sbjct: 435 AKAYHLRGLLRHGMGEHKKAITDLSIG 461
>gi|296087356|emb|CBI33730.3| unnamed protein product [Vitis vinifera]
Length = 981
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/339 (71%), Positives = 283/339 (83%), Gaps = 1/339 (0%)
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSI 333
NR+ + + P D + NE+ ++NGT+D+ K S +S ++ N SE SKSS+
Sbjct: 121 NRRITCENHAMESPEDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKSSV 180
Query: 334 S-DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV 392
+KSSD +E R K S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIAQV
Sbjct: 181 VIHSKSSDISEVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQV 240
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEG Y++AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAW
Sbjct: 241 NEGNYSNAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAW 300
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KRRGQARAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+L
Sbjct: 301 KRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQL 360
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
DKENKSAYTYLGLALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KALE
Sbjct: 361 DKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALE 420
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
C+++VL ID+ F+KAYHLRGLL HG+G+HKKAI DLS G
Sbjct: 421 CIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIG 459
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 289/573 (50%), Gaps = 103/573 (17%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
M SAI+ R ELAKLCS R+WSKAIR+LDSLLAQS IQDICNRAFCYS+LELHKHVIRDC
Sbjct: 1 MESAISERQELAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKHVIRDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKALQL+PTLLQAYILKG A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL
Sbjct: 61 DKALQLEPTLLQAYILKGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL-- 118
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
KQ+R +TCE +++M S E +N N+K++ SE++ DI SS D SE CS
Sbjct: 119 -KQNRRITCE---NHAMES---PEDTVNGNEKLN--SESNGTYDIFVKSS---DESELCS 166
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
+ N S+++ SKS + I+ K S D SE
Sbjct: 167 E-------LNDTSEQS--------SKSSVVIHSK--------------------SSDISE 191
Query: 273 INRQSSDDFDICNGPIDKASVNERHGR---QTNGTHDVHDKLSSDSASLNDSNTNSESYS 329
+ R+SS+ +DI + D+A+ N++ + V +LS A +N+ N YS
Sbjct: 192 VRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQVNEGN-----YS 246
Query: 330 KS-SISDNK-SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK---SKSISVDFR 384
+ SI D D T + + + T+ +R + +K S + +
Sbjct: 247 NAISIFDQILKEDPTYPEALVG------RGTAYAFQRELSSAIADFTKAIESNPSACEAW 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A+ G+ + AI + L+ +P + L RG ++ AA+ D + +Q
Sbjct: 301 KRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQL 360
Query: 445 NPSAGEAWKRRGQARAALGE----------------------------------SVEAIQ 470
+ A+ G A +++GE +A++
Sbjct: 361 DKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALE 420
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+ + L+ + A H RG++ + A+ DLS + ++ N +I
Sbjct: 421 CIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCYHAI 480
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWG-HLTQFYQ 562
GEY +A + + KA+ L+ + +E + FYQ
Sbjct: 481 GEYGEAIKDYDKALTLELDSMEKFVLQCLAFYQ 513
>gi|356565517|ref|XP_003550986.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1042
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/346 (66%), Positives = 277/346 (80%)
Query: 266 ASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNS 325
A+ D SE +S+D+ ++ + D+ + + Q NG+ DV D LS +S S NDS+ S
Sbjct: 170 ATGDKSETCLKSADNSNLKHESHDEYRESNKSDGQVNGSPDVLDTLSYNSESCNDSSDAS 229
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
ES K S + S++ + K+ E EA++NKKFCV RIS + SISVDFRL
Sbjct: 230 ESSDKVSTNSGDSANVPKIFRNPISKFIFSDERKGEARKNKKFCVARISNTNSISVDFRL 289
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA+VNEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ N
Sbjct: 290 SRGIAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFN 349
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AGEAWKRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVED
Sbjct: 350 PLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVED 409
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LSACVKLDK+N SAYTYLGLALSSIGEYK+AEEAHLK++QLD+NFLEAW HLTQFYQDLA
Sbjct: 410 LSACVKLDKDNTSAYTYLGLALSSIGEYKEAEEAHLKSLQLDKNFLEAWAHLTQFYQDLA 469
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KA EC+ ++L+ID RF++AYHLRGLL H +G+H+KAIKDL+ G
Sbjct: 470 KPTKAQECINRMLHIDGRFARAYHLRGLLFHAMGEHRKAIKDLTMG 515
>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
Length = 1011
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 197/229 (86%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DFRLSRGIAQVNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 264 LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 323
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AIQSNPSAGEAWKRRGQARAALGE EA++DL+KALEFEPNS DILHERGIVNFKFKD+N
Sbjct: 324 AIQSNPSAGEAWKRRGQARAALGEFTEAVEDLTKALEFEPNSPDILHERGIVNFKFKDYN 383
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D NFL++W HL+Q
Sbjct: 384 AAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLSQL 443
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y D+ EK L +++VL ID F KAYHLRG+L HG+G+H+ AIKDLS
Sbjct: 444 YLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLS 492
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +++ + +Q + S G+A+ RG +G AI+DLS AL+ E ++ + L+ R
Sbjct: 451 EKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIECLYLRAS 510
Query: 492 VNFKFKDFNAAVEDLSAC--VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---- 545
+ ++ AA++D ++LD +K L I Y A +A+L+ Q
Sbjct: 511 CHHAIGEYKAAIKDYDDVLDLELDSMDKFVLQCLAFYQKEIALY-TASKANLEFSQFNID 569
Query: 546 --LDRNFLEAW 554
+D F E W
Sbjct: 570 DDVDPLFKEYW 580
>gi|357111747|ref|XP_003557673.1| PREDICTED: tetratricopeptide repeat protein 13-like [Brachypodium
distachyon]
Length = 1002
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/229 (74%), Positives = 200/229 (87%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DFRLSRGIAQVNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 255 LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 314
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AIQSNP AGEAWKRRGQARAALGE VEAI+DL+KALEFEP+S DILHERGIV+FKFKD+N
Sbjct: 315 AIQSNPLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDSPDILHERGIVSFKFKDYN 374
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+AVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D +FL++W HL+Q
Sbjct: 375 SAVEDLSTCVKRDKKNSSAHTYLGLTLSAVGEYKRAEDEHLLGIKYDGSFLDSWAHLSQL 434
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y DLA EK L L++VL ID RFSKAYHLRG+L HG+G+H+ AIK+LS
Sbjct: 435 YLDLAYPEKMLNNLEKVLQIDSRFSKAYHLRGILYHGMGRHRSAIKELS 483
>gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group]
Length = 955
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 167/231 (72%), Gaps = 27/231 (11%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + LS +A VNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDF
Sbjct: 233 IILTIGLSNSMASVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDF 292
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T+A++ DL+KALEFEPNS DILHERGIVNFKFKD
Sbjct: 293 TKAVE---------------------------DLTKALEFEPNSPDILHERGIVNFKFKD 325
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+NAAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D NFL++W HL+
Sbjct: 326 YNAAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLS 385
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q Y D+ EK L +++VL ID F KAYHLRG+L HG+G+H+ AIKDLS
Sbjct: 386 QLYLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLS 436
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 120/164 (73%), Gaps = 5/164 (3%)
Query: 40 RIELAKLCSLRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQL 98
R ELA++C RNWSKAIRILD+ LA+S I D+CNRAFCYSQLELHKHV++DCD+AL+L
Sbjct: 5 RAELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALEL 64
Query: 99 DPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
DP LLQAY+LKG A SALG++EEAL+VWE+G+E A+ + DLKQ LELEEL+++ K +
Sbjct: 65 DPALLQAYVLKGKALSALGKREEALAVWEQGHEVAVRDTMDLKQLLELEELVSSVKICET 124
Query: 159 VTCE---YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICD 199
+ CE D S + + +SE + + + T+ K+ +C+
Sbjct: 125 IECEDRVVDASPCDTKVVISEDRV-VDTSCTATTMADTKTVVCE 167
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +++ + +Q + S G+A+ RG +G AI+DLS AL+ E ++ + L+ R
Sbjct: 395 EKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIECLYLRAS 454
Query: 492 VNFKFKDFNAAVEDLSAC--VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---- 545
+ ++ AA++D ++LD +K L I Y A +A+L+ Q
Sbjct: 455 CHHAIGEYKAAIKDYDDVLDLELDSMDKFVLQCLAFYQKEIALY-TASKANLEFSQFNID 513
Query: 546 --LDRNFLEAW 554
+D F E W
Sbjct: 514 DDVDPLFKEYW 524
>gi|168025982|ref|XP_001765512.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683362|gb|EDQ69773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 976
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 178/243 (73%), Gaps = 5/243 (2%)
Query: 373 ISKSK----SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+SKS+ S++VD +LS+GI QVN G Y A++IF+ IL E+P AL+GRGTA AF
Sbjct: 223 VSKSRQNRLSVTVDMKLSKGIQQVNRGNYEEAVNIFNSILTENPKSCGALLGRGTAYAFM 282
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+L+ AI+DF++AI+ +P EAWKRRGQARAA GE +A++DLS+A++ EP + D+LHE
Sbjct: 283 RKLQKAITDFSKAIEVDPKTTEAWKRRGQARAASGEIAQALEDLSRAVQLEP-TPDLLHE 341
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG++NFK K+F AA+EDL C+ D NK AY YLGLALS+ G Y +A +A++LD
Sbjct: 342 RGVINFKLKNFFAAIEDLKGCLAQDTHNKHAYNYLGLALSATGNYVDGIKAQRRAVELDN 401
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F E W HL Q Y++LA+SEKA+ECL++ IDK++ AY + G+LLHGLG+H+ A K L
Sbjct: 402 KFKEGWAHLAQSYKELADSEKAVECLKKATEIDKKYGGAYRIWGILLHGLGEHRNAAKLL 461
Query: 609 SSG 611
++
Sbjct: 462 TTA 464
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 43 LAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
+ + C + WSKAIRI+ SL ++ + NRA+CYS+LELHKHVI+D D+A+ ++P+
Sbjct: 16 VVEACKKKEWSKAIRIISSL-PETTNSHLLLNRAWCYSKLELHKHVIKDADRAIAINPST 74
Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
LQAY+ KG A +AL + EA VW+KGYE AL +L ++L L ++ S T
Sbjct: 75 LQAYLYKGQALAALKKHVEACQVWQKGYESALGLPEELPFVVQLHSLAMGLEKANSDT 132
>gi|440796500|gb|ELR17609.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 898
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 143/239 (59%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S + ++D +++ G VN G + AI +F+ ++ P A +GRGTA A L A+
Sbjct: 204 SGNTTLDEKIAMGYLHVNTGNFPQAIKLFNVLVNLYPKLVAAYLGRGTAYALSGHLSTAV 263
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+F+ AI+ + + EAWKRRGQ+RAA+G+ EA+ DL++A E P ADI H+RG++ FK
Sbjct: 264 EEFSAAIKIDDTCMEAWKRRGQSRAAMGQDAEAVLDLTRAAELAPKDADIYHQRGLIYFK 323
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+++ A ED D +K ++ +LGL L+++G +A +AH +A++LD F EA
Sbjct: 324 LRNYGRAAEDFRRATAADAMSKLSWNHLGLCLNALGRPMEAIQAHKRALELDPAFREALA 383
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
++ Q Y+D NS KA + + L +D + A+HLRGL G G H+ A+ D ++ R
Sbjct: 384 NIGQAYKDYGNSLKAEKYFAKGLKVDPNYMHAFHLRGLARFGAGDHRGALSDFTAALRV 442
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQ 428
+TR ++ D RG+ Y A F + D M + G A
Sbjct: 300 LTRAAELAPKDADIYHQRGLIYFKLRNYGRAAEDFRRATAADAMSKLSWNHLGLCLNALG 359
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R +EA I A++ +P+ EA GQA G S++A + +K L+ +PN H
Sbjct: 360 RPMEA-IQAHKRALELDPAFREALANIGQAYKDYGNSLKAEKYFAKGLKVDPNYMHAFHL 418
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
RG+ F D A+ D +A +++D ++K + G+ L +G +++A
Sbjct: 419 RGLARFGAGDHRGALSDFTAALRVDDKHKDSRLMRGIVLHGLGRFREA 466
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 78 CYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
Y +L L++ + DC+ AL+L P + Y+LKG A + + +A + W G + A
Sbjct: 33 AYLRLGLYRKCLADCEAALRLQPADPRPYLLKGKALVGMNKSADAEAAWRAGLDKA 88
>gi|388522451|gb|AFK49287.1| unknown [Lotus japonicus]
Length = 174
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 125/175 (71%), Gaps = 10/175 (5%)
Query: 33 MASAITA-RIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
MA A T+ R+EL + C+ ++WSKAIR+LDSL+++S IQDICNRAFCY +LELHKHVI+D
Sbjct: 1 MAPAATSERVELTRFCASKDWSKAIRVLDSLISRSASIQDICNRAFCYGKLELHKHVIKD 60
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
CD+ALQLDP LQ +ILKGCA S LGRK +AL VWE+GYEHALH S DL+Q LELEELL
Sbjct: 61 CDRALQLDPAFLQPHILKGCALSELGRKADALLVWEQGYEHALHHSGDLRQLLELEELLR 120
Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-----SDICDSS 201
AKQ E +S+ +SES +N+ SET +N ++ D CD S
Sbjct: 121 TAKQGNDALSE----TRAASVPLSESRSLSNENSSETDKNQDRLAQLCGDACDKS 171
>gi|330789949|ref|XP_003283061.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
gi|325087133|gb|EGC40514.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
Length = 1045
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G VN GKY AI+IF +++ +P+ P + +GRGT+ AF +L+ AI DF++AI+
Sbjct: 300 ISNGNFFVNSGKYKEAIAIFTTVIENNPLIPSSYLGRGTSNAFLGDLDEAIYDFSKAIEL 359
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAV 503
+ ++ +A+KRRGQ++ A G EA++D ++A+ F+ S DI + RG+++++ +++ A+
Sbjct: 360 DNTSSDAYKRRGQSKVARGMEYEALEDFNQAVAFDKESDYDIYYNRGLLHYQMRNYERAL 419
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D V ++ ++ A+ +GL L+ G +A A L++I +D NF ++ ++ Q ++D
Sbjct: 420 KDFKKVVSIEPQHTLAWNRIGLCLNVNGYPMEAYNAFLQSISIDPNFEASYTNIGQCWRD 479
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L +K+LE + L I + A HLRGLL + G+H AIKD S
Sbjct: 480 LGIFDKSLEAFNKALEICPNYCNALHLRGLLFYNSGRHLDAIKDWS 525
>gi|298714022|emb|CBJ27254.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1062
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 1/232 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++ G QVN G Y A+ +F +L P A +G G+A A +E A++ F+
Sbjct: 314 VDNLIALGYLQVNTGNYRKAVELFRGLLSIRPGLVGAHLGLGSALALLGGMEHAVASFSA 373
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDF 499
AI+++P + WKRRGQ RAALG +V A+ DL +A+E F D+LH+RG+V K + F
Sbjct: 374 AIEADPLEPDCWKRRGQTRAALGHAVGALSDLDRAVELFNGRDPDVLHQRGMVYHKLRYF 433
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ AV D S VK ++K+ + + L +GE + AEEA+ +A+ +D +F EAW +L
Sbjct: 434 SRAVSDFSEVVKSSVDSKTDWNMMALCRGQLGEPEAAEEAYRQALAIDPSFKEAWTNLGS 493
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+D EKAL L +D + AYHLRGL HG+G HK A D G
Sbjct: 494 LLRDWGKGEKALGAFDNALSLDTAYVHAYHLRGLCKHGMGDHKGAQADFMRG 545
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ CNRA LE+ + IRD D A+++D L+AY+LK AF LG+ ++A E
Sbjct: 38 VYTACNRATAKLGLEMFRACIRDLDDAIRIDQYALRAYLLKDQAFRGLGKPDQAREALEA 97
Query: 129 GYEHALHQSADLKQFLELEELL 150
G E A + D+ +++L E L
Sbjct: 98 GIE-AGKEGGDVVLYVQLVESL 118
>gi|281207321|gb|EFA81504.1| tetratricopeptide-like helical domain-containing protein
[Polysphondylium pallidum PN500]
Length = 763
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 141/224 (62%), Gaps = 1/224 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+G VN G Y AI +F I+ +P+ P A +GRGT+ A L+ AI DF++ I+
Sbjct: 234 ISKGNYMVNSGLYEEAIQLFTLIINSNPLIPSAYLGRGTSNAITGNLDDAIYDFSKVIEL 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDFNAAV 503
+ + G+A+KRRGQ+R A G EA++D ++A F+ N +DI ++RG+++++ +++ A+
Sbjct: 294 DNTMGDAYKRRGQSRVAKGMDFEALEDFNQAAIFDRDNDSDIYYQRGLLHYQMRNYERAL 353
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D V+ D+ NK A+ +GL L+ G ++A +A +AI+LD F A+ ++ Q +++
Sbjct: 354 KDFRKVVEFDRRNKLAWNRVGLCLNIRGFPREAFDAFDRAIELDSQFEAAFTNVGQCWKE 413
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + +++ + Q L I +S A HLRG+L G+H +AI+D
Sbjct: 414 IGDYDRSYDAFTQALSIAPNYSNALHLRGILFFNSGKHLQAIQD 457
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 32 VMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIR 90
+M S + R E K N+S++I++++ ++ + ++ I NRA C+ +LEL++H I+
Sbjct: 17 MMESIESIRKEAIKCYQNANYSESIKLINKIIQSDRNDLTAISNRATCHYKLELYQHCIK 76
Query: 91 DCDKALQLDP 100
DCD L P
Sbjct: 77 DCDTVLASQP 86
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 6/156 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG---TARAFQRELEAAISDF 438
D RG+ Y A+ F ++++ D A G R F RE A F
Sbjct: 334 DIYYQRGLLHYQMRNYERALKDFRKVVEFDRRNKLAWNRVGLCLNIRGFPRE---AFDAF 390
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
AI+ + A+ GQ +G+ + ++AL PN ++ LH RGI+ F
Sbjct: 391 DRAIELDSQFEAAFTNVGQCWKEIGDYDRSYDAFTQALSIAPNYSNALHLRGILFFNSGK 450
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++D + + D ++ SIG+Y+
Sbjct: 451 HLQAIQDWTDFLDQDSTIADLRQLRAISNCSIGKYR 486
>gi|260804501|ref|XP_002597126.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
gi|229282389|gb|EEN53138.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
Length = 989
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 257/572 (44%), Gaps = 87/572 (15%)
Query: 52 WSKAIRILDSLL---AQSYEIQDI----CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
++ AI++L +L +S E ++I CN A CY +L L + V+ CD A++ D LQ
Sbjct: 22 YNDAIKLLSQVLKDKGRSLEPREIAAVHCNLASCYLKLGLLRKVVSSCDAAIKADAASLQ 81
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
AY+ KG S L E +SV E + Q + L E +L+ + SV
Sbjct: 82 AYLYKGETVSVLSPAGETVSVLSPAGE-TVRQLSVLSPTGETISVLSPTGETVSVLSP-- 138
Query: 165 VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
++S L+ + L+ K Q+R V E+ GR
Sbjct: 139 AGETISVLSPTGKALHRLKK----------------PDQARQVWESAL----------GR 172
Query: 225 SDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ + S I G ++ + E+ +G + T + D + R ++ ++
Sbjct: 173 YGDFQVLS---------EILGCIQCLEEDTSGPT--PTQTKVNGDPAHYGRSTTPP-NLQ 220
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
G D+ + T GT D ND S+ +K+++ ++ DS ++
Sbjct: 221 QGTADRGDSE----KTTEGTADSQG---------NDKTAESQDSNKTTVGTAENQDSNKT 267
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
+ E + +K F R S +F++ RG VNEG Y AI +F
Sbjct: 268 AVGTA-------EGQDSSKTTGGFLDPR-------SPEFKVGRGFLLVNEGNYDEAIKLF 313
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+ IL+ PM +A +GRGTA A R+L A +DFT+A+ P E WKRRGQ RAALG+
Sbjct: 314 NTILQLHPMTYKAYVGRGTAYAMTRQLLKAEADFTQALTLEPKETEIWKRRGQVRAALGQ 373
Query: 465 SVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVK----------LD 513
+AI+DL++A + DI E G++ D +A+ + K LD
Sbjct: 374 EGQAIEDLNRAQSICKVVDVDIQKEVGLIYQAKGDNVSALMHFTRADKVLLVKQKQGELD 433
Query: 514 K-ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
K + K+ + +GL +S+G A + +A+ LD +F E+ ++ Q Y+D N +KA E
Sbjct: 434 KSQAKTLWNAMGLCQNSLGYCMDAVVTYQRALNLDPDFRESIVNMAQAYKDYGNFQKADE 493
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ L +D R +L GL L+G G+ +++
Sbjct: 494 LFARALRLDPRCVTTLNLHGLCLYGAGEIRRS 525
>gi|66823735|ref|XP_645222.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
gi|60473299|gb|EAL71245.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
Length = 1050
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 134/224 (59%), Gaps = 1/224 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+G VN G+Y AI +F I+ +P+ P +GRGT+ AF +L AI+DF+ AI+
Sbjct: 291 ISQGNTFVNAGQYEEAIELFTMIIDNNPLVPSLYLGRGTSNAFLGQLNEAINDFSRAIEL 350
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAV 503
+ ++ +A+KRRGQ++ A EA++D ++A+ F+ + DI + RG+++++ +++ A+
Sbjct: 351 DNTSSDAYKRRGQSKVAKSMEQEALEDFNQAVAFDKEDDYDIYYNRGLLHYQMRNYERAL 410
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D ++ +K A+ +GL L+ G +A +A +A+++D F + ++ Q ++D
Sbjct: 411 KDFKKVTSIEPSHKLAWNRIGLCLNVNGYPMEAYQAFTEALRIDPYFEASHTNIGQCWKD 470
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L + + + + L I +S A HLRGLL G+H AIKD
Sbjct: 471 LGKFDPSYQSFTKALEICPNYSNALHLRGLLFFNSGRHLDAIKD 514
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
+ +A L N +S++ DN SSD+ + R + M +E + + F
Sbjct: 329 TSNAFLGQLNEAINDFSRAIELDNTSSDAYKRRGQSKVAKSMEQEALEDFNQAVAF---- 384
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K D +RG+ Y A+ F ++ +P + A G
Sbjct: 385 ---DKEDDYDIYYNRGLLHYQMRNYERALKDFKKVTSIEPSHKLAWNRIGLCLNVNGYPM 441
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A FTEA++ +P + GQ LG+ + Q +KALE PN ++ LH RG++
Sbjct: 442 EAYQAFTEALRIDPYFEASHTNIGQCWKDLGKFDPSYQSFTKALEICPNYSNALHLRGLL 501
Query: 493 NFKFKDFNAAVEDLSACVKL 512
F A++D + +KL
Sbjct: 502 FFNSGRHLDAIKDWNLFLKL 521
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 52 WSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDP 100
+ + + IL+ L+ + +I +CNRA C +LEL+KH I+DC+ L +P
Sbjct: 31 YVECMNILNKLIELNTNDIIALCNRATCNYKLELYKHCIKDCEVILCKEP 80
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 150/266 (56%), Gaps = 5/266 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
LSF + +K S + N + + + S++ SV+ ++G+A++ G +++AI F ++
Sbjct: 18 LSFGIEPVKAQS--PRSNPQPLLAQNSQN---SVEVLFNQGVAKIKAGNFSAAIKDFTEV 72
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P PEA RG AR+ + + AI D+ +AI NP + +A+ RG+AR+ LG++
Sbjct: 73 IRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYYNRGKARSELGDNKG 132
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI+D ++AL PNSA+ + RGI + KD A++DL+ ++L+ + AY+ G
Sbjct: 133 AIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVR 192
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++IG+ A + AI LD N EA+ + Y + + +KA + Q + +D + A
Sbjct: 193 TTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLA 252
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSR 613
Y+ RG++ G H AI+DL+ R
Sbjct: 253 YNNRGVMRREFGDHAGAIQDLNQALR 278
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI ++Q L +P EA RG +R ++ A+ D +AI+ N
Sbjct: 119 NRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLN 178
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG R +G++ A +DL+ A+ +PNSA+ + RG+ + D+ A +D
Sbjct: 179 PKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQD 238
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD + AY G+ G++ A + +A++ D +A+ + +++L
Sbjct: 239 FNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELG 298
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
N +A++ Q + + Y+ RG++ LG + AI+D + T+ P L TR
Sbjct: 299 NHREAIQDYDQAVRLIPDNPNIYYYRGVVRTQLGDFQGAIEDYHQ-AVTIDPKLFILDTR 357
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 355 LKETSNEAKRNKKFCVTRISK--------SKSISVDFRL-----SRGIAQVNEGKYASAI 401
L S EA N+ R+ +++I +D +L +RG+ + G +A AI
Sbjct: 211 LDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAI 270
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQREL---EAAISDFTEAIQSNPSAGEAWKRRGQA 458
+Q L+ DP +A RG REL AI D+ +A++ P + RG
Sbjct: 271 QDLNQALRFDPKLAKAYNNRGDT---HRELGNHREAIQDYDQAVRLIPDNPNIYYYRGVV 327
Query: 459 RAALGESVEAIQDLSKALEFEP 480
R LG+ AI+D +A+ +P
Sbjct: 328 RTQLGDFQGAIEDYHQAVTIDP 349
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 32 VMASAITARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIR 90
V+ + A+I+ +++++++ IR L+ L ++Y NR S+L +K I
Sbjct: 48 VLFNQGVAKIKAGNFSAAIKDFTEVIR-LNPNLPEAYN-----NRGNARSKLGDNKGAIE 101
Query: 91 DCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELL 150
D ++A+ L+P QAY +G A S LG + A+ D Q L L
Sbjct: 102 DYNQAINLNPKSEQAYYNRGKARSELGDNKGAIE--------------DYNQALNLNPNS 147
Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVS 208
A +R ++ +++ + + ++ + N KM+E N ++ I D+ +D++
Sbjct: 148 AEAYNNRGIS-RHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLN 206
Query: 209 ETCSKSSHDPDLCNGRS 225
+ + N R
Sbjct: 207 HAIGLDPNSAEAYNNRG 223
>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 1279
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 148/638 (23%), Positives = 269/638 (42%), Gaps = 71/638 (11%)
Query: 3 KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
KR L +RY L I + ++++ ++ A AR + C LRN+ +AI +
Sbjct: 312 KRGL--ARYDLGDKQGAIDDFNQVITINPHFADGYAARGLV--YCDLRNYQEAINDFNQT 367
Query: 63 L------AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSAL 116
+ AQ+Y NR SQL + I D +L L+P AY +G S L
Sbjct: 368 IRINPNYAQAYH-----NRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDL 422
Query: 117 GRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSE 176
G ++ A+ D Q ++++ A +R Y + N ++
Sbjct: 423 GSQKAAMD--------------DYTQAIKIDPNYAQAYNNRGAIRTY-LGNYQGAIDDYI 467
Query: 177 SGLNANDKMSETSENHNKSDI--------CDSSSQSRDVSETCSKSSHDPDLCNGRSDEA 228
L + +E N + I D +Q+ +++ +++ + + +
Sbjct: 468 QALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDK 527
Query: 229 KGGSSVPVSKSGLHINGKLREVSENHN--GSSDGSKSTHASRDASEINRQSSDDFDICNG 286
+G ++ L+IN + N +S G K +N + D
Sbjct: 528 QG--AIDDYTQALNINPNYAQAYYNRGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAW 585
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY-----SKSSISDNKSS-- 339
+ + + ++ G N T +LN + + E+Y ++S + DN+ +
Sbjct: 586 GMVCSELGDKPGAVNNYTQ-----------ALNINPDDPETYIARGLTRSELGDNQGAID 634
Query: 340 DSTESRSKLSFKWDMLKETSNEAK-----RNKKFCVTRISKSKSISVDF---RLSRGIAQ 391
D T++ L+ D +N + + + +++ +IS D+ +RGIA
Sbjct: 635 DYTQA---LNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAY 691
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ G Y SAI + + ++ P + +GRGTA + + AI+DF A+ + S +A
Sbjct: 692 YDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYADA 751
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG R LG+ AI D + AL PN A + RGIV ++ +D A+ED + V
Sbjct: 752 YNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELRDNQGAMEDFNHAVN 811
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ AY G+ +GE + A E +AI + N+ E++ + +L N +KA+
Sbjct: 812 INSNYAQAYNNRGIVRICLGERQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAI 871
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E Q L I+ +++AY+ RG+ LG + A D S
Sbjct: 872 EDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFS 909
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 120/233 (51%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
S D RG+A+ + G AI F+Q++ +P + + RG R + AI+
Sbjct: 303 NSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITINPHFADGYAARGLVYCDLRNYQEAIN 362
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DF + I+ NP+ +A+ RG AR+ LG+ AI D + +L P A + RGI+
Sbjct: 363 DFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDL 422
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
AA++D + +K+D AY G + +G Y+ A + +++A+++D N+ E + +
Sbjct: 423 GSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHN 482
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L +++ A++ Q L I+ +++AY+ RG+ LG + AI D +
Sbjct: 483 WGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAIDDYT 535
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 5/237 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++SIS++ L RGIA+ N G AI F+Q L +P A RG A
Sbjct: 229 TQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDINPNLALAAYSRGVAHRDMGY 288
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI DF + + N + +A+ +RG AR LG+ AI D ++ + P+ AD RG
Sbjct: 289 LQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITINPHFADGYAARG 348
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V +++ A+ D + ++++ AY G+A S +G+ + A + + ++ L+ F
Sbjct: 349 LVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKF 408
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ + DL + + A++ Q + ID +++AY+ RG + LG ++ AI D
Sbjct: 409 ASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDD 465
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A + G AI F+Q L + + +A RG AR + + AI DF + I N
Sbjct: 278 SRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITIN 337
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG L EAI D ++ + PN A H RG+ + D A++D
Sbjct: 338 PHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDD 397
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + SAY G+ S +G K A + + +AI++D N+ +A+ + L
Sbjct: 398 YTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLG 457
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N + A++ Q L +D +++ YH G L ++ AI D +
Sbjct: 458 NYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYT 501
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG AR+ + AI+DFT++I N + + + RG AR LG+ AI D ++AL+ P
Sbjct: 211 RGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDINP 270
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG+ + A+ED + + L+ AYT GLA +G+ + A +
Sbjct: 271 NLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDF 330
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I ++ +F + + Y DL N ++A+ Q + I+ +++AYH RG+ LG
Sbjct: 331 NQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGD 390
Query: 601 HKKAIKDLS 609
+ AI D +
Sbjct: 391 KQGAIDDYT 399
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 366 KKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
++ + S++ I+ ++ ++RG A+ G AI F+Q L +P Y +A RG
Sbjct: 833 RQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRG 892
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A + E A DF++AIQ NP EA+ R LG+ AI+D ++AL N
Sbjct: 893 VAYTDLGDREWAKDDFSQAIQINPYYAEAYNNRAIVCYELGDHQGAIEDFNQALNINSNY 952
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ ++RG + ++ D A+ED + + L
Sbjct: 953 VEAYNKRGNIRYELGDRQGAIEDFNRALNL 982
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR+ LG++ AI D ++++ N ERGI D A++D + + ++
Sbjct: 211 RGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDINP 270
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A G+A +G +KA E + + L+ F +A+ DL + + A++
Sbjct: 271 NLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDF 330
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
QV+ I+ F+ Y RGL+ L +++AI D + R
Sbjct: 331 NQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIR 369
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL 63
RY L + + + V ++S A A R + ++C ++ ++S+AI ++
Sbjct: 793 RYELRDNQGAMEDFNHAVNINSNYAQAYNNR-GIVRICLGERQLAIEDFSQAI-----II 846
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y + NR + +L + I D ++AL ++P QAY +G A++ LG +E
Sbjct: 847 AYNY-TESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDRE--- 902
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNAND 183
W K D Q +++ A +R++ C Y++ + ++ LN N
Sbjct: 903 --WAKD---------DFSQAIQINPYYAEAYNNRAIVC-YELGDHQGAIEDFNQALNINS 950
Query: 184 KMSE 187
E
Sbjct: 951 NYVE 954
>gi|428182577|gb|EKX51437.1| hypothetical protein GUITHDRAFT_66029 [Guillardia theta CCMP2712]
Length = 682
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------ 481
Q L AA DF+ A+ ++P+ +AWKRRGQ RAALG EAI+DL+KA P+
Sbjct: 2 QGNLAAAAKDFSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAASLSPDHEYAYL 61
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ D +RGIV K DF A+ D + +D + + ++GL +S+G ++A A+
Sbjct: 62 TCDFFFQRGIVYHKMMDFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIAYE 121
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A QLD N EAW +L Q Y+D + + A + +D + YHLRGLL +G G+
Sbjct: 122 RATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPNYVHCYHLRGLLFYGCGEI 181
Query: 602 KKAIKDLSSG 611
+ A+ D S G
Sbjct: 182 RLALHDFSRG 191
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 13/248 (5%)
Query: 325 SESYSKSSISDNKSSDS----TESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
++ +S++ +D +D+ ++R+ L F + +K+ + A ++ + ++
Sbjct: 9 AKDFSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAAS------LSPDHEYAYLT 62
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
DF RGI + A++ F + L D P G AI +
Sbjct: 63 CDFFFQRGIVYHKMMDFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIAYER 122
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A Q +P+ EAW GQA G+ A + + A + +PN H RG++ + +
Sbjct: 123 ATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPNYVHCYHLRGLLFYGCGEIR 182
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---RNFLEAWGHL 557
A+ D S + D+ +K+ + + S+G+ A + +++D + + A GHL
Sbjct: 183 LALHDFSRGHECDRNDKNCFLMKAVCKHSLGDMSGAISEYTLLLKMDPVRKELMVAAGHL 242
Query: 558 TQFYQDLA 565
+ ++LA
Sbjct: 243 CYYQRELA 250
>gi|384250834|gb|EIE24313.1| protein prenylyltransferase [Coccomyxa subellipsoidea C-169]
Length = 859
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 134/233 (57%), Gaps = 9/233 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILK--EDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+S ++ VNEG A+AI I D I+ A + RGTARA R+L+ AI DF+ I
Sbjct: 125 VSIAVSHVNEGNLAAAIDILDHIIATTSGAHLSGAHVARGTARAMMRDLKGAIDDFSVTI 184
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF---EP-NSADILHERGIVNFKFKD 498
++ P+ G+AW RRGQARAALGE +A+ DL++ L+ EP A+ ERG + K +D
Sbjct: 185 EAVPAYGDAWMRRGQARAALGEDEDALVDLARCLQLSATEPARQAEARLERGKILHKLRD 244
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ +AV +L V ++ +++ A+ +LGL S+G+ + + + ++++ N LEAW HL
Sbjct: 245 YRSAVAELQQAVDINPKSQQAWNFLGLCQVSMGDIRPGAACYERVLRVNPNSLEAWMHLA 304
Query: 559 QFYQDLANSEKALECLQQVLYIDK---RFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q ++ A+ E A + +D+ R S + + GLG+H+KA K L
Sbjct: 305 QARKEEASVEAAEAAFARAAELDRDGGRASARLRMHAHMCQGLGRHRKAAKLL 357
>gi|67480111|ref|XP_655416.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56472551|gb|EAL50030.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|449707388|gb|EMD47059.1| tetratricopeptide repeatcontaining protein tpr [Entamoeba
histolytica KU27]
Length = 890
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 128/234 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+LK P +GRG+A+A +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAIAHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 278 TDFNLAVKKDSKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
HL Q Y+D+ +A + L++ + + +Y++ +L G+HK+A+ LS
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLS 451
>gi|407039100|gb|EKE39457.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 890
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 128/234 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+LK P +GRG+A+A +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 278 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
HL Q Y+D+ +A + L++ + + +Y++ +L G+HK+A+ LS
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLS 451
>gi|384210167|ref|YP_005595887.1| hypothetical protein Bint_2713 [Brachyspira intermedia PWS/A]
gi|343387817|gb|AEM23307.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 853
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 128/229 (55%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ Y AI F++++K +P +A + RG A+++ E E AI DF E I+
Sbjct: 195 FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKL 254
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG A+ G+ E I+D +KA+E PN+ + RGI K + + AV
Sbjct: 255 NPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVV 314
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+K N+ Y G+ + +Y++A E KAI L++++ +A+ + +
Sbjct: 315 DFNKAIKLNKNNEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINF 374
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ + + ++K ++KAY RG+L G++K+AI D S+
Sbjct: 375 GKYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAINDFKIFSK 423
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 120/225 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+V K AI F++ +K + EA RG A+ E AI DF E I+ NP
Sbjct: 163 RGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNP 222
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG A++ L E EAI+D ++ ++ PN+ RGI + +ED
Sbjct: 223 NNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIESGKHEEVIEDF 282
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ N++AY G+A + + +Y++A KAI+L++N + + L
Sbjct: 283 NKAIELNPNNENAYFNRGIAKAKLEKYEEAVVDFNKAIKLNKNNEKTYFSRGITKVKLEK 342
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
E+A+E + + ++K ++KAY RG+L G++K+AI D +
Sbjct: 343 YEEAIEDFNKAIGLNKSYNKAYFNRGILKINFGKYKEAINDFNKA 387
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI +V KY AI F++I+K +P G A+A + E AI DF E I+
Sbjct: 93 FNRGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKL 152
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ RG A+ L + EAI+D +K+++ + + RGI K + + A++
Sbjct: 153 NTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIK 212
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ N+ AY G+A S + EY++A + + I+L+ N +A+ +
Sbjct: 213 DFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIES 272
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+ +E + + ++ AY RG+ L ++++A+ D + +
Sbjct: 273 GKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVVDFNKAIK 321
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 6/233 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG Y AI F++ +K +P +A RG + + E AI DF +
Sbjct: 56 DLYFNRGKLYSIINMYDEAIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNKI 115
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + G A+A+L + EAI+D ++ ++ + + RG+ K +
Sbjct: 116 IKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKE 175
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
A+ED + +KL+ +N+ AY G+A + + Y++A + + I+L+ N +A+ G
Sbjct: 176 AIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAK 235
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L E+A++ +V+ ++ KAY RG+ G+H++ I+D +
Sbjct: 236 SY---LEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIESGKHEEVIEDFNKA 285
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 29 VDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKH 87
+D M A+ +IE KL S + AI++++ + + +D+ NR YS + ++
Sbjct: 16 LDYFMTDALKYKIE--KLISSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDE 73
Query: 88 VIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
I D +KA++L+P +AY +G L + EEA+ + K
Sbjct: 74 AIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNK 114
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAI----TARIELAK-LCSLRNWSKAIRILDSLLAQSY 67
L K + I + +E++++++ A A+++L K ++ +++K+I+ L+S ++Y
Sbjct: 136 LEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIK-LNSKNEEAY 194
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NR ++LE+++ I+D ++ ++L+P +AY+ +G A S L EEA+
Sbjct: 195 -----FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAI 245
>gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
Length = 929
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 12/232 (5%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+ Q+N G A +I D++L + P A + RGTARA +R+L A+ DF AI+ P
Sbjct: 175 VTQINSGSIVEAEAILDKVLVKTPRELGARVARGTARALRRDLAGAVEDFGVAIEVEPRY 234
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNFKFKDF 499
++WKRRGQAR+ALG+ A+ DL KA++ P + A+ E+G++ K +D+
Sbjct: 235 ADSWKRRGQARSALGDHEGALADLQKAIDLAPLFGGPDSAQSRAECYVEKGMIYQKMRDY 294
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +L VKLD N A+ LGL +S G+ + A+ KA++L+ E W ++ Q
Sbjct: 295 RRACRELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPKLKEGWVNMGQ 354
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDL 608
++ +++A L + L +D A H+ +L G+H AIK L
Sbjct: 355 ALKEEGRTKEAERVLLKALALDPPDQPAVHVLRVLAQMKQQKGEHAAAIKLL 406
>gi|440291767|gb|ELP85009.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
Length = 926
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 132/239 (55%), Gaps = 1/239 (0%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+++ + +D L+ G VN K A+ F L + P L+GRG+A A +
Sbjct: 210 NRTNDVVIDKELAMGYLYVNNNKLTEAVEYFTTFLSKYPNVVGGLLGRGSAYAMLARFQE 269
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIV 492
AI DFT+AI+ +P+ G+++KRRGQ AA G A+ D +KA+E + AD +RG +
Sbjct: 270 AIVDFTQAIKIDPTCGDSYKRRGQTLAATGNLERALHDFNKAIELCKETDADCYSQRGSL 329
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++K++ A +D +KL+ + SA+ +LGL +++G +A +A+++A+Q++ ++E
Sbjct: 330 FQQYKNYELAKDDFKKSLKLNASDASAWNHLGLNNNALGLIDEAADAYVRALQINDKYVE 389
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ +L Q +D +K+ + ++ + S A+++ G+L G H A+ + +
Sbjct: 390 CYVNLAQLQKDAGQFQKSKDIFMKLFRMCPTHSYAHYVCGVLYQQNGMHTAAVNEFKAA 448
>gi|440294379|gb|ELP87396.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba invadens
IP1]
Length = 915
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 126/233 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ + +D ++++G VN GK AI FDQ+LK P +GRG+ARA +L+ A+
Sbjct: 242 TNDLELDKQIAKGYLYVNTGKMQDAIKHFDQLLKAHPELIAGYLGRGSARAMSGDLKRAL 301
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF +A++ N +A+KRRGQ +AALG A+ D ++A++ P AD +RG +
Sbjct: 302 TDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQAIKLSPEEADSYRQRGSLFHS 361
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A +DL +K + L L + +G +A A+ +AI N+ + +
Sbjct: 362 LGVFDKASDDLKKSLKYAPGDAQVINELALCFNGMGLVDEAINAYTRAINAKENYADPYI 421
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
HL Q Y+D+ ++ + L++ + + +Y++ G +L G+H++A+ L
Sbjct: 422 HLGQLYRDMGCYIRSKQMLEKAMKLAPTNHLSYYVLGNVLVSSGRHREALPFL 474
>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
Length = 1024
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 126/224 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +AIQ N
Sbjct: 469 NRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQIN 528
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D A+ D
Sbjct: 529 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 588
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N AY G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 589 YNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 648
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ ++ +Y+ RG+ LG + AI D +
Sbjct: 649 DKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 692
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 126/228 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + RG A+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +A
Sbjct: 499 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 558
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN+AD + RGI + D
Sbjct: 559 IQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQG 618
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ +Y G+A S +G+ + A + +AIQ++ N+ +++ +
Sbjct: 619 AIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIAR 678
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + I+ ++ AY+ RGL LG + AI D +
Sbjct: 679 SELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYN 726
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 3/247 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +++ I+ ++ L+ RG A+ + G AI ++Q ++ +P Y A RG
Sbjct: 242 KQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALAYYNRG 301
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
AR+ + + AI D+ +AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN
Sbjct: 302 NARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELGDKQGAIVDYNQAIQINPND 361
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RGI + D A+ D + ++++ N AY G+A S +G+ + A + +
Sbjct: 362 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQ 421
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ++ N+ A+ + +L + + A+ Q + I+ + AY+ RGL LG +
Sbjct: 422 AIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQ 481
Query: 603 KAIKDLS 609
AI D +
Sbjct: 482 GAIVDYN 488
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 3/238 (1%)
Query: 375 KSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
KS S+ + +F +R G AI + Q ++ +P Y A IGRG AR+ +
Sbjct: 217 KSSSVYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDK 276
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+ +AIQ NP+ A+ RG AR+ LG+ AI D ++A++ PN AD + RGI
Sbjct: 277 QGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGI 336
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D A+ D + ++++ + AY G+A S +G+ + A + +AIQ++ N
Sbjct: 337 ARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNA 396
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + +L + + A+ Q + I+ ++ AY+ RGL LG + AI D +
Sbjct: 397 DAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYN 454
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 121/223 (54%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G AI + Q ++ +P Y ++ RG AR+ + + AI D+ +AIQ NP
Sbjct: 742 RGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINP 801
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG AR+ LG+ AI D ++A++ PN+AD + RGI + D A+ D
Sbjct: 802 NDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDY 861
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ +Y G+A S +G+ + A + +AIQ++ N+ +A+ +L +
Sbjct: 862 NQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGD 921
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ Q + I+ ++ AY+ RG+ LG + AI D +
Sbjct: 922 KQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYN 964
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 3/247 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +++ I+ ++ L+ RG A+ G AI ++Q ++ +P Y +A RG
Sbjct: 276 KQGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRG 335
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
AR+ + + AI D+ +AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN+
Sbjct: 336 IARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNN 395
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RGI + D A+ D + ++++ AY GLA S +G+ + A + +
Sbjct: 396 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQ 455
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ++ N A+ + +L + + A+ Q + I+ ++ AY RG LG +
Sbjct: 456 AIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQ 515
Query: 603 KAIKDLS 609
AI D +
Sbjct: 516 GAIVDYN 522
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 122/232 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 771 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 830
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +++ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 831 IQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 890
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ AY G A S +G+ + A + +AIQ++ N+ +A+ +
Sbjct: 891 AIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIAR 950
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+L + + A+ Q + I+ + AY+ RGL LG + A D + +R
Sbjct: 951 SELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGARGDFQTAAR 1002
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 120/228 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 329 DAYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQA 388
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN A + RG+ + D
Sbjct: 389 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQG 448
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ N AY GLA S +G+ + A + +AIQ++ N+ +A+
Sbjct: 449 AIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNAR 508
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + I+ ++ AY RG LG + AI D +
Sbjct: 509 SELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYN 556
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 119/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P A RG AR+ + + AI D+ +AIQ N
Sbjct: 435 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQIN 494
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ LG+ AI D ++A++ PN AD RG + D A+ D
Sbjct: 495 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 554
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY GLA S +G+ + A + +AIQ++ N +A+ + +L
Sbjct: 555 YNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELG 614
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ ++ +Y+ RG+ LG + AI D +
Sbjct: 615 DKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYT 658
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +AIQ N
Sbjct: 367 NRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQIN 426
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ LG+ AI D ++A++ PN+A + RG+ + D A+ D
Sbjct: 427 PNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVD 486
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A S +G+ + A + +AIQ++ N+ +A+ +L
Sbjct: 487 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELG 546
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ + AY+ RGL LG + AI D +
Sbjct: 547 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYN 590
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 123/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P Y ++ RG AR+ + + AI D+T+AIQ N
Sbjct: 605 NRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQIN 664
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+ LG+ AI D ++A++ PN A + RG+ + D A+ D
Sbjct: 665 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVD 724
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N AY G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 725 YNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELG 784
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ + AY+ RGL LG + AI D +
Sbjct: 785 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYN 828
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + RG A+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 533 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 592
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 593 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 652
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ +Y G+A S +G+ + A + +AIQ++ N+ A+ +
Sbjct: 653 AIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLAR 712
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + I+ + AY+ RG+ LG + AI D +
Sbjct: 713 SELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYT 760
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 121/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P A RG AR+ + + AI D+T+AIQ N
Sbjct: 707 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQIN 766
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D A+ D
Sbjct: 767 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 826
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N +Y G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 827 YNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 886
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ ++ AY RG LG + AI D +
Sbjct: 887 DKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYN 930
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P Y A RG AR+ + + AI D+ +AIQ N
Sbjct: 401 NRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQIN 460
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ LG+ AI D ++A++ PN AD RG + D A+ D
Sbjct: 461 PNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 520
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A S +G+ + A + +AIQ++ N +A+ + +L
Sbjct: 521 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELG 580
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ + AY+ RG+ LG + AI D +
Sbjct: 581 DKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYN 624
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 122/228 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P Y A RG AR+ + + AI D+ +A
Sbjct: 669 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQA 728
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 729 IQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 788
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ + AY GLA S +G+ + A + +AIQ++ N +++ +
Sbjct: 789 AIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIAR 848
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + I+ ++ +Y+ RG+ LG + AI D +
Sbjct: 849 SELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 896
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 567 DAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQA 626
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +++ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 627 IQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 686
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ AY GLA S +G+ + A + +AIQ++ N A+ +
Sbjct: 687 AIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIAR 746
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + I+ ++ +Y+ RG+ LG + AI D +
Sbjct: 747 SELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 794
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 88/157 (56%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D +RGIA+ G AI ++Q ++ +P Y ++ RG AR+ + + AI D+
Sbjct: 837 NADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 896
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 897 QAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDK 956
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + ++++ + AY GLA S +G+ + A
Sbjct: 957 QGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGA 993
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +A
Sbjct: 873 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 932
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D
Sbjct: 933 IQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQG 992
Query: 502 AVEDLSACVKL 512
A D +L
Sbjct: 993 ARGDFQTAARL 1003
>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1337
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A + G+Y AIS +DQ +K P Y EA RG A ++ E E AIS + +AI+
Sbjct: 419 FNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKI 478
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A + LGE +AI +A++F+P+ + RG+ ++ A+
Sbjct: 479 KPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAIS 538
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A++ G ALS +GEY+KA ++ +AI+ + +AW + L
Sbjct: 539 SYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYL 598
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + F +A+ RGL L LG+++KAI
Sbjct: 599 GEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAI 639
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R+ + + + K+ D+ L RG A N G+Y AIS DQ +K P Y EA
Sbjct: 157 RDWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWAN 216
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A ++ E E AIS +AI+ P EAW RG A LGE +AI +A++F+P
Sbjct: 217 RGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKP 276
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RG ++ A+ +K + A+ G+ALS +GEY+KA ++
Sbjct: 277 DLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSY 336
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+ + EAW + +L EKA+ Q + + +A++ RGL L LG+
Sbjct: 337 DQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGE 396
Query: 601 HKKAI 605
++KAI
Sbjct: 397 YEKAI 401
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A N G+Y AIS +DQ +K P EA RG A A E E AIS +AI+
Sbjct: 249 LVRGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKF 308
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A + LGE +AI +A++F+P+ + + RG ++ A+
Sbjct: 309 KPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAIS 368
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ GLAL ++GEY+KA ++ +AI+ ++ EAW + DL
Sbjct: 369 SYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDL 428
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + + +A+ +RG+ L LG+H+KAI
Sbjct: 429 GEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAI 469
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y AIS +DQ +K P Y EA RG A E E AIS + +AI+
Sbjct: 386 NRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFK 445
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +A++ +P+ + RG ++ A+
Sbjct: 446 PDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISS 505
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ GLALS +GEY+KA ++ +AI+ ++ EAW + DL
Sbjct: 506 YDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLG 565
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + +A+ RG+ L LG+++KAI
Sbjct: 566 EYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAI 605
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 114/221 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A G+Y AIS +DQ +K P EA RG A A E E AIS + +AI+
Sbjct: 317 LVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKF 376
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LGE +AI +A++F+P+ + RG+ + ++ A+
Sbjct: 377 KPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAIS 436
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ G+ALS +GE++KA ++ +AI++ + EAW + L
Sbjct: 437 SYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHL 496
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + +A+ RGL L LG+++KAI
Sbjct: 497 GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAI 537
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 117/220 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS DQ +K P EA + RG+A E E AIS + +AI+
Sbjct: 216 NRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A LGE +AI +A++F+P+ + RG+ ++ A+
Sbjct: 276 PDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G AL+++GEY+KA ++ +AI+ ++ EAW + +L
Sbjct: 336 YDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLG 395
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + + +A+ RGL L+ LG+++KAI
Sbjct: 396 EYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAI 435
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 112/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+Y AIS +DQ +K P Y EA RG A E E AIS + +AI+
Sbjct: 352 NRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFK 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LGE +AI +A++F+P+ + RG+ + A+
Sbjct: 412 PDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISS 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A++ G ALS +GEY+KA ++ +AI+ + EAW + L
Sbjct: 472 YDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLG 531
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + + +A+ RG L LG+++KAI
Sbjct: 532 EYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAI 571
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+Y AIS +DQ +K P EA RG A ++ E E AIS + +AI+
Sbjct: 488 NRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFK 547
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +A++F+P+ RG+ ++ A+
Sbjct: 548 PDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISS 607
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A++ GLALS +GEY+KA ++ +AI+ ++ EAW + L
Sbjct: 608 YDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLG 667
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
EKA+ Q + F +A+ RG
Sbjct: 668 EYEKAISSYDQAIKFKPDFHQAWSNRG 694
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ +K P Y EA RG A + E E AIS + +AI+
Sbjct: 624 NRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLGEYEKAISSYDQAIKFK 683
Query: 446 PSAGEAWKRRGQARA 460
P +AW RG A A
Sbjct: 684 PDFHQAWSNRGNAAA 698
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + K I D+ ++ + A R + L +L + KAI D + ++ +
Sbjct: 224 LGEYEKAISSCDQAIKFKPDLHEAWLVRG--SALGNLGEYEKAISSYDQAIKFKPDLHEA 281
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N R + L ++ I CD+A++ P +A++++G A S LG E+A+S Y+
Sbjct: 282 WNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAIS----SYD 337
Query: 132 HALHQSADLKQ 142
A+ DL +
Sbjct: 338 QAIKFKPDLHE 348
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
NR S L ++ I CD+A++ P L +A++++G A LG E+A+S Y+
Sbjct: 215 ANRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAIS----SYDQ 270
Query: 133 ALHQSADLKQ 142
A+ DL +
Sbjct: 271 AIKFKPDLHE 280
>gi|407034776|gb|EKE37387.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 931
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 125/230 (54%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK A++ + L++ P I RGTA A + + A+ DF+
Sbjct: 221 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAYAMIGQYQMAVEDFSS 280
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P+ +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 281 AVIIDPTNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+D +KA E + + + A++LRG+L +G H KA K+ +
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFA 450
>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 600
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I+ DF + RG+A+ + Y AI+ F+Q ++ +P Y A RG AR
Sbjct: 262 AIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNAR 321
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+DF +AIQ NP A+ RG AR+ LG+ EAI D ++A++ P+ A
Sbjct: 322 SDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATA 381
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ D + ++++ + +AY GLA S++G+ + A + +AIQ
Sbjct: 382 YYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQ 441
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + A+ + DL + ++A+ Q + I+ + AY+ RG LG ++ AI
Sbjct: 442 INPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAI 501
Query: 606 KDLS 609
D +
Sbjct: 502 ADFT 505
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 132/248 (53%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ D+ ++ RG+A+ N G Y AI+ + Q ++ +P A R
Sbjct: 88 NYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNR 147
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AR+ + E AI+DF +AIQ NP A+ RG AR+ LG+ AI D ++A++ P+
Sbjct: 148 GLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
AD + RG +D+ A+ D + ++L+ ++ AY+ G A S + +Y+ A
Sbjct: 208 YADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFN 267
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AIQ++ +F A+ + DL + + A+ Q + I+ ++ AY+ RG LG
Sbjct: 268 QAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDD 327
Query: 602 KKAIKDLS 609
+ AI D +
Sbjct: 328 QGAIADFN 335
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + Y AI+ F+Q ++ +P + A RG AR+ + + AI+DF +AIQ N
Sbjct: 248 NRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQIN 307
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ AI D ++A++ P+ A + RG D+ A+ D
Sbjct: 308 PDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIAD 367
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ +AY GLA S +G+ + A + +AIQ++ + A+ + +L
Sbjct: 368 FAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLG 427
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + AL Q + I+ + AY+ RGL LG +++AI D +
Sbjct: 428 DDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFN 471
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 124/224 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G Y AI+ + Q +K +P Y +A RG AR+ + + AI+D+T+AIQ N
Sbjct: 180 NRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLN 239
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ L + AI D ++A++ P+ A + RG+ +D+ A+ D
Sbjct: 240 PDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIAD 299
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + +AY G A S +G+ + A +AIQL+ +F A+ + +L
Sbjct: 300 FNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLG 359
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A+ Q + ++ + AY+ RGL LG + AI D +
Sbjct: 360 DYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYN 403
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 121/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G Y AI+ F Q ++ +P A RG AR+ + + AI+D+T+AI+ N
Sbjct: 146 NRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKIN 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ L + AI D ++A++ P+ A RG +D+ A+ D
Sbjct: 206 PDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIAD 265
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY G+A S + +Y+ A +AIQ++ ++ A+ + DL
Sbjct: 266 FNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLG 325
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + ++ F+ AY+ RG LG +++AI D +
Sbjct: 326 DDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFA 369
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 127/243 (52%), Gaps = 3/243 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ ++ DF + RG A+ N G Y AI+ F Q ++ +P A RG AR
Sbjct: 330 AIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLAR 389
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+D+ +AIQ NP A+ RG AR+ LG+ A+ D ++A++ P+ A
Sbjct: 390 SDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAA 449
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D+ A+ D + +K++ ++ AY G A S++G+Y+ A +AI+
Sbjct: 450 YNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIK 509
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +A+ + DL + + A+ Q + ++ ++ AY RGL LG KA+
Sbjct: 510 INPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLGDKPKAL 569
Query: 606 KDL 608
+D
Sbjct: 570 EDF 572
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G AI+ ++Q ++ +P A RG AR+ + + A++D+ +AIQ N
Sbjct: 384 NRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQIN 443
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ EAI D ++A++ P+ AD + RG D+ A+ D
Sbjct: 444 PDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIAD 503
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G A S +G+Y+ A + +AI+L+ ++ A+G+ Y+DL
Sbjct: 504 FTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLG 563
Query: 566 NSEKALECLQQV 577
+ KALE +Q
Sbjct: 564 DKPKALEDFRQA 575
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 129/244 (52%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I+ D+ +RG A+ + G AI+ F+Q ++ +P + A RG AR
Sbjct: 296 AIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNAR 355
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + E AI+DF +AIQ NP A+ RG AR+ LG+ AI D ++A++ P+ A
Sbjct: 356 SNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAA 415
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ D + ++++ + +AY GLA S +G+Y++A +AI+
Sbjct: 416 YNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIK 475
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A+ + +L + + A+ Q + I+ + AY+ RG LG ++ AI
Sbjct: 476 INPDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAI 535
Query: 606 KDLS 609
D +
Sbjct: 536 ADYN 539
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 117/224 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N Y AI+ + Q ++ +P +A RG AR+ + + AI+DF +AIQ N
Sbjct: 214 NRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQIN 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ L + AI D ++A++ P+ A+ + RG D A+ D
Sbjct: 274 PDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIAD 333
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G A S++G+Y++A +AIQL+ + A+ + DL
Sbjct: 334 FNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLG 393
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + I+ + AY+ RGL LG + A+ D +
Sbjct: 394 DDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYN 437
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI+ ++Q L+ P E R A + AI+DF +AI+ NP A+
Sbjct: 52 KGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDYAIAYY 111
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG AR+ LG+ AI D ++A++ P+ A + RG+ D+ A+ D + ++L+
Sbjct: 112 NRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLN 171
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +AY GLA S +G+Y+ A + +AI+++ ++ +A+ + +L + + A+
Sbjct: 172 PDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIAD 231
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + ++ +KAY RG L ++ AI D +
Sbjct: 232 YTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFN 267
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G A++ ++Q ++ +P A RG AR+ + + AI+DF +AI+ N
Sbjct: 418 NRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKIN 477
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ LG+ AI D ++A++ P AD + RG D+ A+ D
Sbjct: 478 PDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIAD 537
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ + +AY GLA +G+ KA LE + +Q
Sbjct: 538 YNQAIKLNPDYAAAYGNRGLAYRDLGDKPKA--------------LEDFRQAATLFQQQG 583
Query: 566 NSEKALECLQQVL 578
N+E + +QQ++
Sbjct: 584 NTE-GYQSIQQII 595
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A+ N G Y AI+ F Q +K +P +A RG AR+ + + AI+D+ +
Sbjct: 481 ADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQ 540
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI+ NP A+ RG A LG+ +A++D +A
Sbjct: 541 AIKLNPDYAAAYGNRGLAYRDLGDKPKALEDFRQA 575
>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 496
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++ +I+ +F +RG A+ G AI+ +DQ +K +P + A RG AR
Sbjct: 116 AITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNAR 175
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+DF +AI NP+ EA+ RG RA LG+ AI DL++A++ PN A
Sbjct: 176 AKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKA 235
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + K D A+ DL+ +K++ AY G A + +G+ + A +AI+
Sbjct: 236 YYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIK 295
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N + + L + + A+ Q + I+ ++ AY RG + LG + AI
Sbjct: 296 TNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAI 355
Query: 606 KDLS 609
D +
Sbjct: 356 TDYN 359
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++++ I+ +F +RG + G AI+ +Q +K +P Y EA RG AR
Sbjct: 218 AITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNAR 277
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+DF +AI++NP+ + R ARA LG+ AI D ++A+ PN A+
Sbjct: 278 AELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANA 337
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG V K D A+ D + + ++ AY G A +G+ + A + +AI
Sbjct: 338 YKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAIN 397
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF +A+ + L + + A+ Q + I+ F+ AY RG+ LG + AI
Sbjct: 398 INPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNRGIASLALGDKQGAI 457
Query: 606 KD 607
D
Sbjct: 458 AD 459
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 122/242 (50%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ + + D L+RG A+ G + I+ +DQ +K +P +A RG ARA ++
Sbjct: 55 VKREGNTLTDTLLNRGNARDKLGNKQAQITDYDQAIKTNPNDAQAYYNRGNARAELGDMP 114
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+ +AI NP+ +A+ RG ARA LG+ AI D +A++ PN A + RG
Sbjct: 115 GAITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNA 174
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K D A+ D + + ++ AYT G + +G+ + A +AI+++ NF +
Sbjct: 175 RAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAK 234
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
A+ + L + + A+ L Q + I+ +++AY RG LG + AI D +
Sbjct: 235 AYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAI 294
Query: 613 RT 614
+T
Sbjct: 295 KT 296
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ +I+ ++ +RG + G AI+ +Q +K +P + +A RGT R
Sbjct: 184 AITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLR 243
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+++ AI+D +AI+ NP+ EA+ RG ARA LG+ AI D ++A++ PN
Sbjct: 244 GKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLP 303
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ R K D A+ D + + ++ +AY G + +G+ + A + +AI
Sbjct: 304 YNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAIN 363
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N+ +A+ + L + + A+ Q + I+ F+ AY RG + LG + AI
Sbjct: 364 INPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAI 423
Query: 606 KDLS 609
D +
Sbjct: 424 TDYN 427
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++ I+ +F ++ RG A+ G AI+ F+Q + +P Y EA RGT R
Sbjct: 150 AITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLR 209
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+D +AI+ NP+ +A+ RG R LG+ AI DL++A++ PN +
Sbjct: 210 AELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEA 269
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + D A+ D + +K + + Y A + +G+ + A +AI
Sbjct: 270 YGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAIN 329
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N+ A+ + L + + A+ Q + I+ ++ AY RG + LG + AI
Sbjct: 330 INPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAI 389
Query: 606 KDLS 609
D +
Sbjct: 390 TDYN 393
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ G AI+ F+Q + +P Y A RG RA +++ AI+D+ +AI N
Sbjct: 306 NRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININ 365
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR LG+ AI D ++A+ PN AD RG +K D A+ D
Sbjct: 366 PNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITD 425
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + ++ AY G+A ++G+ + A +A+ L
Sbjct: 426 YNQAININPNFADAYLNRGIASLALGDKQGAIADTQQAVDL 466
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ +I+ D +RG A+ G AI+ ++Q + +P + +A RG AR
Sbjct: 354 AITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNAR 413
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+++ AI+D+ +AI NP+ +A+ RG A ALG+ AI D +A++
Sbjct: 414 YKLGDMQGAITDYNQAININPNFADAYLNRGIASLALGDKQGAIADTQQAVDL 466
>gi|67469147|ref|XP_650565.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56467204|gb|EAL45179.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
Length = 931
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 123/230 (53%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK AI+ + L++ P I RGTA A + + A+ DF
Sbjct: 221 IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 280
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 281 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+D +KA E + + + A++LRG+L +G H KA K+ +
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFA 450
>gi|167382099|ref|XP_001735971.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
gi|165901772|gb|EDR27784.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
SAW760]
Length = 933
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 123/230 (53%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK A++ + L++ P I RGTA A + + A+ DF
Sbjct: 223 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAFAMIGQYQMAVEDFGS 282
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P+ +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 283 AVDIDPTNADAHKRRGQTLIALGKINEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 342
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 343 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 402
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+D KA + + + + A++LRG+L +G H KA K+ +
Sbjct: 403 LLKDAGKPNKAEDVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFA 452
>gi|449708373|gb|EMD47849.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
KU27]
Length = 793
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 123/230 (53%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK AI+ + L++ P I RGTA A + + A+ DF
Sbjct: 83 IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 142
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 143 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 202
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 203 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 262
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+D +KA E + + + A++LRG+L +G H KA K+ +
Sbjct: 263 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFA 312
>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
repeats [uncultured archaeon]
Length = 425
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 120/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI F++ ++ DP Y A RGTA + ++ E AI DF + I+
Sbjct: 138 NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELI 197
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG L + AI+D +K +E +PNSA + RG+ K + A+ED
Sbjct: 198 PDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIED 257
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY GL +++ +Y++A E K I+LD N A+ + Y+ L
Sbjct: 258 FNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLE 317
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+E + + +D ++ +Y+ RGL L Q+++AI+D +
Sbjct: 318 EYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFN 361
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI F++ ++ P YP A RG ++ E AI DF + I+ +
Sbjct: 172 NRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELD 231
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ A+ RG L + AI+D +K +E PN + RG+ K + A+ED
Sbjct: 232 PNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIED 291
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + +AY G A + EY++A E K I+LD N+ ++ + Y DL
Sbjct: 292 FNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLK 351
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+E + + +D + Y RG LGQ+++AI+D +
Sbjct: 352 QYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYN 395
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 119/225 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N +Y AI F++ ++ DP Y A RGTA + ++ E AI DF + I+
Sbjct: 103 INRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIEL 162
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A + L + AI+D +K +E P+ RG+ K + A+E
Sbjct: 163 DPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIE 222
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + +AY GL ++ +Y++A E K I+L N A+ + Y +L
Sbjct: 223 DFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNL 282
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+E + + +D + AY+ RG L ++++AI+D +
Sbjct: 283 KQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFN 327
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 123/241 (51%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + S +RG+ +Y AI F++ ++ P + A I RG A
Sbjct: 53 CFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELIPTFAGAYINRGDAYKNL 112
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E AI DF + I+ +P+ A+ RG A + L + AI+D +K +E +PN A +
Sbjct: 113 KQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNN 172
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG K + A+ED + ++L + AY+ GL ++ +Y++A E K I+LD
Sbjct: 173 RGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDP 232
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N A+ + Y +L E+A+E + + + + AY+ RGL + L Q+++AI+D
Sbjct: 233 NSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDF 292
Query: 609 S 609
+
Sbjct: 293 N 293
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 2/247 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++ I G+Y AI FD++++ +P + RG ++ E AI DF + I+
Sbjct: 36 NKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELI 95
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L + AI+D +K +E +PN A + RG K + A+ED
Sbjct: 96 PTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIED 155
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G A S + +Y++A E K I+L ++ A+ + Y +L
Sbjct: 156 FNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLK 215
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
E+A+E + + +D + AY+ RGL L Q+++AI+D + + ++P+ +
Sbjct: 216 QYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNK-TIELIPNHTFAYNN 274
Query: 626 WRNLCFN 632
R L +N
Sbjct: 275 -RGLTYN 280
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N +Y AI F++ ++ DP A RG ++ E AI DF + I+
Sbjct: 206 NRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELI 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG L + AI+D +K +E +PNSA + RG K +++ A+ED
Sbjct: 266 PNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIED 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD +Y GL + +Y++A E K I+LD N + + ++DL
Sbjct: 326 FNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLG 385
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E+A+E + + +D + AY R L L L + +
Sbjct: 386 QYERAIEDYNKAIELDPNDTDAYENRELALSKLKEQE 422
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I S +AGE W + A GE +AI+ K +E PNSA + RG+V K +
Sbjct: 25 IVSAETAGE-WHNKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYER 83
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + ++L AY G A ++ +Y++A E K I+LD N+ A+ + Y
Sbjct: 84 AIEDFNKTIELIPTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAY 143
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL E+A+E + + +D ++ AY+ RG L Q+++AI+D +
Sbjct: 144 SDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFN 191
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
L + + I + ++ + +D A+A R + ++ +++K I LDS A SY
Sbjct: 282 LKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIE-LDSNYAGSY 340
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y L+ ++ I D +K ++LDP Y +G AF LG+ E A+ +
Sbjct: 341 -----YNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYN 395
Query: 128 KGYE 131
K E
Sbjct: 396 KAIE 399
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRI------LDSLLAQS 66
L + + I + ++ + + A A R + K +L+ + +AI LD A +
Sbjct: 78 LKQYERAIEDFNKTIELIPTFAGAYINRGDAYK--NLKQYERAIEDFNKTIELDPNYALA 135
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y NR YS L+ ++ I D +K ++LDP AY +G A+S L + E A+ +
Sbjct: 136 YN-----NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDF 190
Query: 127 EKGYE 131
K E
Sbjct: 191 NKTIE 195
>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 1280
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RGIA+ N G AI + Q + +P Y +A RG AR + + ++ D+T+AI N
Sbjct: 517 GRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAININ 576
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ G R+ LG+ EA+ + ++AL P+ + RG+ + D A++D
Sbjct: 577 PNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + Y G+ S I +Y++A + + +AI + ++ +A+ + Y DL
Sbjct: 637 YTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLG 696
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N ++A++ Q L I + AY RG L+ LG + AI D
Sbjct: 697 NYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGDSQGAINDF 739
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 123/228 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ + G AI F+Q+++ + + + RG + AI+DF++AI+ NP
Sbjct: 314 RGLARYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINP 373
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG AR+ LG+ AI D +++L P A + RGI+ AA++D
Sbjct: 374 NYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDC 433
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ AY G + +G Y+ A + +++A+++D N++EA+ + +L +
Sbjct: 434 TQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLED 493
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+E A++ Q + I+ +++AY+ RG+ LG + AI D + T
Sbjct: 494 NEGAIDDYTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINT 541
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ +IS D+ +R I + G Y AI + Q L+ +A IGRGTA
Sbjct: 667 AIDDYTEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTAL 726
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+DF A+ +PS +A+ RG R LG+ AI D AL+ +P+ AD
Sbjct: 727 YKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADA 786
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGIV ++ +D A+ED + + ++ AY G+ +GE + A E +A
Sbjct: 787 YNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATI 846
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N+ E++ + +L N +KA+E Q L I+ +++AY+ RG+ LG + A
Sbjct: 847 IASNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAK 906
Query: 606 KDLS 609
D S
Sbjct: 907 DDFS 910
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS D + RG A G AI+ F L DP Y +A RG R + + AI
Sbjct: 712 KSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIG 771
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DF A+ +PS +A+ RG R L ++ AI+D + AL N A + RGIV
Sbjct: 772 DFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICL 831
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+ED + + +Y G A +G +KA E +A+ ++ N+ +A+ +
Sbjct: 832 GERQLAIEDFTQATIIASNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNN 891
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y DL +SE A + Q L I+ +++AY+ RG++ + LG + AI+D +
Sbjct: 892 RGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFN 944
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 127/617 (20%), Positives = 249/617 (40%), Gaps = 75/617 (12%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
+R L I + + + ++S +A A R I + L ++ ++++A+ I +L
Sbjct: 215 ARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLA 274
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+Y +R +S + + I D ++ L L+ AY +G A LG K+ A+
Sbjct: 275 LAAY------SRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAI 328
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS-VTCEYDVSNSMSSLTVSESGLNAN 182
D Q + + R V C D+ N ++ + N
Sbjct: 329 D--------------DFNQVIRINSHFADGYAARGLVYC--DLGNHQEAINDFSQAIRIN 372
Query: 183 DKMSETSENH--------NKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSV 234
++ N +K D +QS +++ + + ++ + RSD +++
Sbjct: 373 PNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGII--RSDLGSNKAAM 430
Query: 235 PVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVN 294
+ IN E N G+ T+ N Q + D I +D V
Sbjct: 431 DDCTQAIRINPNYAEAYNNR-----GAIRTYLG------NYQGAIDDYIQALRVDSNYVE 479
Query: 295 ERHGRQTN--GTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKW 352
+ T D + + ++N + +++Y I+ R L K
Sbjct: 480 AYYNWGTTRINLEDNEGAIDDYTQAININPNYAQAYYGRGIA----------RFNLGDKQ 529
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ + + N + +RGIA+ N ++ + Q + +P
Sbjct: 530 GAIDDYTQAINTNPNYAQAY------------YNRGIARFNLEDKQGSVDDYTQAININP 577
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
Y +A G R+ + A++++T+A+ NP E + RG R+ LG++ AI D
Sbjct: 578 NYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDY 637
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++AL P+ A I + RGIV D+ A++D + + + + AY + +G
Sbjct: 638 TQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLGN 697
Query: 533 YKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y++A + + +++++ N +A+ G T Y+ L +S+ A+ L ID ++ AY+ R
Sbjct: 698 YQRAIDDYTQSLEIKSNCADAYIGRGTALYK-LGDSQGAINDFHHALDIDPSYADAYNNR 756
Query: 592 GLLLHGLGQHKKAIKDL 608
G++ + LG H+ AI D
Sbjct: 757 GIVRYELGDHQGAIGDF 773
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G + AI F L DP Y +A RG R R+ AI DF A+ N
Sbjct: 755 NRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNIN 814
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG R LGE AI+D ++A N + RG ++ + A+ED
Sbjct: 815 SNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNYTESYINRGYARYELGNRQKAIED 874
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+A + +G+ + A++ +A+Q++ + EA+ + L
Sbjct: 875 FNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLG 934
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
+ + A+E Q L I+ + +AY++RG + + LG + AI+D + L NL
Sbjct: 935 DRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRALSLGSLDLTENLKF 994
Query: 626 W 626
W
Sbjct: 995 W 995
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 9/259 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++SIS++ L+ RGIA+ N G AI F+Q L +P A RG +
Sbjct: 230 TQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLALAAYSRGVTHSDMGY 289
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI DF + + N + +A+ RRG AR LG+ AI D ++ + + AD RG
Sbjct: 290 LEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDFNQVIRINSHFADGYAARG 349
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V + A+ D S ++++ AY G+A S +G+ + A + + +++ L+ F
Sbjct: 350 LVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKF 409
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD--- 607
A+ + DL +++ A++ Q + I+ +++AY+ RG + LG ++ AI D
Sbjct: 410 ASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQ 469
Query: 608 -LSSGSRTMMPHLIWNLTR 625
L S + + W TR
Sbjct: 470 ALRVDSNYVEAYYNWGTTR 488
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG AR+ + AI+DFT++I N + +A+ RG AR+ LG+ EAI+D ++AL+ P
Sbjct: 212 RGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINP 271
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG+ + A++D + + L+ AYT GLA +G+ + A +
Sbjct: 272 NLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDF 331
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I+++ +F + + Y DL N ++A+ Q + I+ +++AYH RG+ LG
Sbjct: 332 NQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGD 391
Query: 601 HKKAIKDLS 609
+ AI D +
Sbjct: 392 KQGAIDDYT 400
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 114/229 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGIA+ + G + AI+ F Q + + +A + RG AR+ + + AI DF +A+
Sbjct: 210 LCRGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDI 269
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A RG + +G +AI D ++ L D RG+ + D A++
Sbjct: 270 NPNLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAID 329
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ Y GL +G +++A +AI+++ N+ +A+ + L
Sbjct: 330 DFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQL 389
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + A++ Q L ++ +F+ AY+ RG++ LG +K A+ D + R
Sbjct: 390 GDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIR 438
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A+ G AI F+Q L +P Y +A RG A + E A DF++A+Q
Sbjct: 856 INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQI 915
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EA+ RG LG+ AI+D ++AL+ N + + RG + ++ D A+E
Sbjct: 916 NPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIE 975
Query: 505 DLSACVKL 512
D + + L
Sbjct: 976 DFNRALSL 983
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL 63
RY L I + + + ++S A A R + ++C ++ ++++A I+ S
Sbjct: 794 RYELRDNRGAIEDFNHALNINSNYAQAYNNR-GIVRICLGERQLAIEDFTQAT-IIASNY 851
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+SY NR + +L + I D ++AL ++P QAY +G A++ LG E
Sbjct: 852 TESY-----INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSE--- 903
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTC 161
W K D Q L++ A +R + C
Sbjct: 904 --WAKD---------DFSQALQINPYYAEAYNNRGIVC 930
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 508 ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +++D E + A+TYL G+A S +G+++ A ++I ++ N +A+ +L
Sbjct: 196 AVLEIDLE-EDAHTYLCRGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLG 254
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++A+E Q L I+ + A + RG+ +G +KAI D +
Sbjct: 255 DGQEAIEDFNQALDINPNLALAAYSRGVTHSDMGYLEKAIDDFN 298
>gi|384207675|ref|YP_005593395.1| hypothetical protein Bint_0181 [Brachyspira intermedia PWS/A]
gi|343385325|gb|AEM20815.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 257
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 14/227 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ E KY AI FD+ ++ DP RG + + E AI D+ +AI+ NP+
Sbjct: 10 GLNYFKERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ LG+ EAI+D KA+E + N +D + RGI + A++D
Sbjct: 70 DSDTYNNRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYD 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
++LD SAY+ G+A ++G Y++A + + KAI+LD N A+ G L Q+
Sbjct: 130 KAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQY 189
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + + +K++E ++ +S Y+ RG+ LGQ+K A+KD
Sbjct: 190 KEAIKDFDKSIE-------LNPSYSDVYNNRGVSKENLGQYKDALKD 229
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 7/195 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +VN G+Y AI +D+ ++ +P + RG A+ + + AI D+ +AI+ +
Sbjct: 42 NRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYNNRGIAKYNLGQYQEAIKDYDKAIELD 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +++ RG A+ LG+ EAI+D KA+E + N + RGI + A++D
Sbjct: 102 SNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLT 558
++LD + +AY GLA S+G+YK+A + K+I+L+ ++ + + +L
Sbjct: 162 YDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLG 221
Query: 559 QFYQDLANSEKALEC 573
Q+ L + +KALE
Sbjct: 222 QYKDALKDYKKALEL 236
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G+Y AI +D+ ++ D ++ RG A+ + + AI D+ +AI+ +
Sbjct: 76 NRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELD 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG A+ LG EAI+D KA+E + N ++ + RG+ + A++D
Sbjct: 136 HNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++L+ Y G++ ++G+YK A + + KA++LD
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
++Y L + + I + D+ + +DS + + R I L +++++ KAI LD
Sbjct: 80 AKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIE-LDHNY 138
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ +Y NR L L++ I+D DKA++LD AY +G A +LG+ +EA+
Sbjct: 139 SSAY-----SNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAI 193
Query: 124 SVWEKGYE 131
++K E
Sbjct: 194 KDFDKSIE 201
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSL-----RNWSKAIRILDSLLAQSY 67
L + + I + D+ + +D +SA + R K L +++ KAI LD+ + +Y
Sbjct: 118 LGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIE-LDTNDSNAY 176
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L +K I+D DK+++L+P+ Y +G + LG+ ++AL ++
Sbjct: 177 -----NNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYK 231
Query: 128 KGYE 131
K E
Sbjct: 232 KALE 235
>gi|156363467|ref|XP_001626065.1| predicted protein [Nematostella vectensis]
gi|156212927|gb|EDO33965.1| predicted protein [Nematostella vectensis]
Length = 730
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 6/235 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEAAI 435
V F + I+ + G AIS F +I+KE P A +GRGTA + +AAI
Sbjct: 6 VSFITAHAISLLGCGDIDDAISYFTKIIKEHPKVTSAFLGRGTAYVKKGIQIKENSDAAI 65
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SDF+ I +P E W RR + + +G EAI+D+S AL +P SA++ G ++F
Sbjct: 66 SDFSTVISHSPKNPEGWIRRAEVLSPIGRIPEAIKDISVALSLQP-SAELYLISGTLHFM 124
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+D+ A ++L ++ + +A YLGL+L G ++A + KA+Q + N E
Sbjct: 125 SEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQQAIPLYKKALQANTNTAEVHR 184
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L Y++L ++ A E L ++ R ++ +HLRG+L + G+ A+ D +
Sbjct: 185 SLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFKA 239
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ S S + L G Y +A ++ L+ +P A + G + + ++
Sbjct: 104 VALSLQPSAELYLISGTLHFMSEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQ 163
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI + +A+Q+N + E + G A LG++ A + + AL EP SA+ H RG++
Sbjct: 164 QAIPLYKKALQANTNTAEVHRSLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGML 223
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ A+ D AC D +N + + +++G +
Sbjct: 224 QYMNGKPALALNDFKACQSFDPQNTACLYMKAVCYATLGNF 264
>gi|338210531|ref|YP_004654580.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336304346|gb|AEI47448.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
slithyformis DSM 19594]
Length = 446
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 122/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A+ N AI FD+ ++ +P Y +A + RG ++A Q + +AI DF+ +I+ N
Sbjct: 66 NRAMAKANLKDNRGAILDFDRSIELNPKYSDAYLYRGVSKAKQDDYRSAIQDFSRSIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + +RG RA L A+QDL++ +E EPN+A L+ RG V K +DF +A+ D
Sbjct: 126 PDDPQGYLQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALAD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L ++ SAY G + + ++ A + KAI+L + E++ + L
Sbjct: 186 FSRVIDLTPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLE 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ Q + +D + +AY+ RG LG ++AI DL+
Sbjct: 246 KYEEAIADFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLN 289
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + + A++ + + ++ E+ RG AR+ + E AI+DF +AI +
Sbjct: 202 GRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIADFDQAIILD 261
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE--PNSADILHERGIVNFKFKDFNAAV 503
P A+ RG ++ LG EAI DL+KA++ P + + I D V
Sbjct: 262 PQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRSVLDDLRNVV 321
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ + +L E A G+ + G+ K A KAI+L+ + EA+
Sbjct: 322 QERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSA 381
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ + ++ ++++AY++RGL+ H LG DLS
Sbjct: 382 IGDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLGDENSGCLDLS 427
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 36/262 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI + Y A+ ++ ++ +P AL RG + + +A++DF+ I
Sbjct: 133 LQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALADFSRVIDL 192
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + A+ RG R L + A+ D SKA+E + + ++ + RG K + + A+
Sbjct: 193 TPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIA 252
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------------RN 549
D + LD +N AY G S +G ++A KA+ ++ R+
Sbjct: 253 DFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRS 312
Query: 550 FLEAWGHLTQ----------------FYQDLANSEK-----ALECLQQVLYIDKRFSKAY 588
L+ ++ Q F + + +++ A+ L + + ++ +S+AY
Sbjct: 313 VLDDLRNVVQERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAY 372
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
RG++ +G + A++D SS
Sbjct: 373 FTRGMVKSAIGDQRGAVQDCSS 394
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EAL RG + Q + + AI D +AI+ NP+ EA+ RG ++A+G+ A+QD S A
Sbjct: 336 EALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAIGDQRGAVQDCSSA 395
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
++ P A+ + RG++ D N S C+ L K + YT
Sbjct: 396 VKLNPKYAEAYYVRGLIKHSLGDEN------SGCLDLSKAGELGYT 435
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++SKAI + ++ + + NR F S+LE ++ I D D+A+ LDP +AY
Sbjct: 216 AVADYSKAIEL------KADDSESFYNRGFARSKLEKYEEAIADFDQAIILDPQNHRAYY 269
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G S LG + EA+S K
Sbjct: 270 GRGFCKSKLGSQREAISDLNK 290
>gi|167392256|ref|XP_001733493.1| tetratricopeptide repeat protein, tpr [Entamoeba dispar SAW760]
gi|165895951|gb|EDR23526.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba dispar
SAW760]
Length = 454
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 103/187 (55%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+L+ P +GRG+A+A +L+ A+
Sbjct: 228 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLRNHPNLLAGYLGRGSAKAMLGDLQKAL 287
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 288 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 347
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 348 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 407
Query: 556 HLTQFYQ 562
HL Q Y+
Sbjct: 408 HLGQLYR 414
>gi|282899251|ref|ZP_06307223.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195859|gb|EFA70784.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 595
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ F Q++K +P A RG +R+ + + AISDFT+ I+ N
Sbjct: 327 NRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEIN 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR G+ AI D ++++ P + RGI + D A+ D
Sbjct: 387 PNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISD 446
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V ++ AY GLA ++G+ A +AI++ NF +A+ + DL
Sbjct: 447 FTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLG 506
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ Q + I F++AY+ RGL LH LG + A+ D +
Sbjct: 507 DKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFT 550
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 119/238 (50%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K ++ +RG ++ + G AIS F ++++ +P + EA RG AR +
Sbjct: 346 TQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEINPNFAEAYNNRGLARRDSGD 405
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT++I NP A+ RG AR LG+ AI D ++A+ PN A + RG
Sbjct: 406 KQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISDFTQAVTINPNFAQAYNNRG 465
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D A+ D + +K+ AY GL+ S +G+ A +AI++ NF
Sbjct: 466 LARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNF 525
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + L + + A+ Q + I+ F++AY+ RGL LG + AI D
Sbjct: 526 AQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNFAQAYNNRGLSRSDLGDKEGAISDF 583
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 35/241 (14%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+Y A RG R + + AI+DFT AI NP+ +++ R R LG+ AI D
Sbjct: 252 VYAIAYNDRGVNRYQSGDKQGAINDFTAAINVNPNFAKSYYNRAAIRNELGDKQGAISDF 311
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ L F P +A + RGI++ + + A+ D + +KL+ N AY G + S +G+
Sbjct: 312 TQFLTFHPYNALAYYNRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGD 371
Query: 533 YKKAEEAHLKAIQLDRNFLEAW--------------GHLTQFYQ---------------- 562
+ A K I+++ NF EA+ G +T F Q
Sbjct: 372 KQGAISDFTKVIEINPNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRG 431
Query: 563 ----DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+L + A+ Q + I+ F++AY+ RGL H LG AI D + + ++P+
Sbjct: 432 IARDELGDKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIK-IIPN 490
Query: 619 L 619
Sbjct: 491 F 491
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+K ++ +++ +I+ +F + RG+A+ N G AI+ F Q +K P + +A R
Sbjct: 439 DKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNR 498
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G +R+ + AISDFT+AI+ P+ +A+ RG A +LG+ A+ D ++A++ PN
Sbjct: 499 GLSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQAIKINPN 558
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A + RG+ D A+ D L N
Sbjct: 559 FAQAYNNRGLSRSDLGDKEGAISDFKNAAVLFNRN 593
>gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
Length = 706
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 125/235 (53%), Gaps = 3/235 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
KS+SI+ + Q N G AI+ ++Q +K DP Y +A I RG R+ + + A
Sbjct: 311 KSQSIAY---FDKAAEQYNGGDKQGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGA 367
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+D+ +AI+ +P+ A+ RG + LG+ AI D ++A++ + N D + RGIV
Sbjct: 368 IADYNQAIKLDPNYALAYYNRGIVHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRS 427
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A+ D + +KL+ +AY GL S +G+ + A + +AI+L+ N+ A+
Sbjct: 428 ELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAY 487
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +L + A+ Q + +D ++ AY+ RG+L LG + AI D +
Sbjct: 488 YNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYN 542
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RGI + G AI ++Q +K +P Y A I RG R+ + + AI+D+ +
Sbjct: 416 TDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQ 475
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ A+ RG + LG+ AI D ++A+ + N D + RGI+ + D
Sbjct: 476 AIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQ 535
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + +KL+ +AY GL S +G+ + A + +AI+L+ N+ A+ +
Sbjct: 536 GAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTV 595
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L + A+ Q + +D ++ AY+ RG+L LG + AI D +
Sbjct: 596 HSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYN 644
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ ++Q +K D Y +A RG R+ + + AI D+ +AI+ N
Sbjct: 387 NRGIVHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLN 446
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R+ LG++ AI D ++A++ PN A + RGIV+ + D A+ D
Sbjct: 447 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIAD 506
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G+ S +G+ + A + +AI+L+ N+ A+ + +L
Sbjct: 507 YNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 566
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+++ A+ Q + ++ ++ AY+ RG + LG + AI D + R
Sbjct: 567 DNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIR 614
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 148/292 (50%), Gaps = 7/292 (2%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
S ++S + +S S+ DS +S+S F D E N +K+ + +++ +
Sbjct: 289 SPSDSMNSGESGTSNENIDDSIKSQSIAYF--DKAAEQYNGG--DKQGAIANYNQAIKLD 344
Query: 381 VDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
D+ ++RG+ + G AI+ ++Q +K DP Y A RG + + + AI+D
Sbjct: 345 PDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALAYYNRGIVHSELGDRQGAIAD 404
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AI+ + + +A+ RG R+ LG+ AI D ++A++ PN + RG+V +
Sbjct: 405 YNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 464
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A+ D + +KL+ AY G+ S +G+ + A + +AI+LD N+ +A+ +
Sbjct: 465 DNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNR 524
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ Q + ++ ++ AY RGL+ LG ++ AI D +
Sbjct: 525 GILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYN 576
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 118/224 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + G AI+ ++Q +K +P Y A RG + + AI+D+ +AI+
Sbjct: 454 INRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRL 513
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + +A+ RG R+ LG+ AI D ++A++ PN + RG+V + D A+
Sbjct: 514 DHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIA 573
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ AY G S +G+ + A + +AI+LD N+ +A+ + +L
Sbjct: 574 DYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSEL 633
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A++ Q + +D ++ AY+ RG++ LG ++ AI D
Sbjct: 634 GDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAIADF 677
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ ++Q ++ D Y +A RG R+ + + AI D+ +AI+ N
Sbjct: 489 NRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLN 548
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R+ LG++ AI D ++A++ PN A + RG V+ + D A+ D
Sbjct: 549 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIAD 608
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G+ S +G+ + A + + +AI+LD N+ A+ + +L
Sbjct: 609 YNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELG 668
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
++ A+ Q+ + I ++ K + R L
Sbjct: 669 YNQGAIADFQKAVNIYQQQGKENNYRDAL 697
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 100/182 (54%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+++ +AI+ +P +A+ RG R+ LG+ AI D ++A++ +PN A + RGI
Sbjct: 331 QGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALAYYNRGI 390
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+ + D A+ D + +KLD AY G+ S +G+ + A + +AI+L+ N+
Sbjct: 391 VHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYT 450
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + +L +++ A+ Q + ++ ++ AY+ RG++ LG + AI D +
Sbjct: 451 NAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQA 510
Query: 612 SR 613
R
Sbjct: 511 IR 512
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RGI + G AI ++Q +K +P Y A I RG R+ + + AI+D+ +
Sbjct: 518 TDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQ 577
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ A+ RG + LG+ AI D ++A+ +PN D + RGI+ + D
Sbjct: 578 AIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSELGDKQ 637
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A++D + +KLD +AY G+ S +G + A KA+ +
Sbjct: 638 GAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAIADFQKAVNI 683
>gi|158334744|ref|YP_001515916.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158304985|gb|ABW26602.1| serine/threonin protein kinase with TRP repeats [Acaryochloris
marina MBIC11017]
Length = 670
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD---FRLSRGI 389
I+ SS T S +F + + + +RN + + S++ +S D L RG
Sbjct: 328 IATRMSSSETSGESATAF---IRRGDAKYNRRNYEDAIADYSEAIRLSPDNAQAYLGRGN 384
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+ +Y A+ +D+ LK DP Y A GRG + +++ E AI D+ +AIQS+P
Sbjct: 385 ARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPQFA 444
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
A+ RG ++AL E AI+D S+A+ P RG+ ++ A+ED S
Sbjct: 445 LAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSET 504
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L+ +N +A+ G+A +GE ++A + +AI+L+ A+ + + L ++E
Sbjct: 505 IRLNPDNDNAFNSRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEG 564
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A++ + + +D + S AY RG H L ++K AI+D +
Sbjct: 565 AIKDCTETIRLDPQSSFAYSARGKAHHALKRYKAAIEDYT 604
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 106/197 (53%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A I RG A+ +R E AI+D++EAI+ +P +A+ RG AR AL E EA+ D +AL
Sbjct: 344 AFIRRGDAKYNRRNYEDAIADYSEAIRLSPDNAQAYLGRGNARYALEEYPEALIDYDEAL 403
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P+ + RG V F KDF A++D + ++ D + A+ G S++ E++ A
Sbjct: 404 KHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPQFALAFYNRGNVKSALKEHRAA 463
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E +AI+L+ + A+ L N A+E + + ++ A++ RG+ +
Sbjct: 464 IEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSETIRLNPDNDNAFNSRGVARY 523
Query: 597 GLGQHKKAIKDLSSGSR 613
LG+ ++AIKD + R
Sbjct: 524 KLGESRQAIKDFTEAIR 540
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + ++ +AI F Q ++ +P Y A + RG ++A AI D++E I+ N
Sbjct: 449 NRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSETIRLN 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR LGES +AI+D ++A+ P ++ RG K KD A++D
Sbjct: 509 PDNDNAFNSRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEGAIKD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ ++LD ++ AY+ G A ++ YK A E + +A+ ++ WG+
Sbjct: 569 CTETIRLDPQSSFAYSARGKAHHALKRYKAAIEDYTQALTIN----SGWGN 615
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+++ YA AI + + ++ +P A RG AR E AI DFTEAI+
Sbjct: 482 LLRGVSKAALTNYAGAIEDYSETIRLNPDNDNAFNSRGVARYKLGESRQAIKDFTEAIRL 541
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG+++ L ++ AI+D ++ + +P S+ RG + K + AA+E
Sbjct: 542 NPKNSFAYCNRGESKLKLKDAEGAIKDCTETIRLDPQSSFAYSARGKAHHALKRYKAAIE 601
Query: 505 DLSACVKLD 513
D + + ++
Sbjct: 602 DYTQALTIN 610
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A+ G+ AI F + ++ +P A RG ++ ++ E AI D TE I+ +
Sbjct: 517 SRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEGAIKDCTETIRLD 576
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------NSADILHERGIVNFKFKDF 499
P + A+ RG+A AL AI+D ++AL + AD + RG K D
Sbjct: 577 PQSSFAYSARGKAHHALKRYKAAIEDYTQALTINSGWGNSDSPADSYYNRGSAKSKLNDI 636
Query: 500 NAAVEDL 506
AVEDL
Sbjct: 637 AGAVEDL 643
>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 652
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + GK+ AI +++ + +P RGT + E AI D+ + I N
Sbjct: 83 NRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDAIQDYNKTIDLN 142
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L E +AI D +KA++ PN RG ++ A+ D
Sbjct: 143 PNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGTAFTNLSNYEKAIND 202
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ N S Y Y G + G Y +A + KAI+L+ F+ + +L Y +L
Sbjct: 203 FNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLN 262
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ EKA+E L + + +D FS AY++RG+ + +A+KD S
Sbjct: 263 DYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFS 306
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-GRGTARAFQRELEAAISDFT 439
+++ +RG + GK+ AI +D+ ++ D RG A + E AI D+
Sbjct: 9 LNYYYNRGDTFFDLGKFEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYN 68
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP+ ++ RG A +LG+ +AIQD +KA++ PN+A + RG + +
Sbjct: 69 KAIDLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKY 128
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + + L+ + AY G A + + EY+KA KAI L+ N A+ +
Sbjct: 129 EDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGT 188
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L+N EKA+ + + ++ + Y+ RG L G + +A+KD S
Sbjct: 189 AFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFS 238
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY AI +++ + +P A RG A + E E AI+DF +AI N
Sbjct: 117 NRGTTFTNLEKYEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLN 176
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L +AI D +KA++ N+A + RG + +++ AV+D
Sbjct: 177 PNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKD 236
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++L+ Y+ LG +++ +Y+KA E KAI LD NF +A+ Y +
Sbjct: 237 FSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQE 296
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A++ + + ++ + Y+ G+L L ++KAI+ L+
Sbjct: 297 KFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLN 340
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A N Y AI+ F++ + + RGT Q + A+ DF++AI+
Sbjct: 184 FNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIEL 243
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + G L + +AI++L+KA++ +PN +D + RGI + F+ AV+
Sbjct: 244 NPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVK 303
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D S ++L+ +K Y LG+ + Y+KA E KAI LD NF +A
Sbjct: 304 DFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPNFSDA 352
>gi|218437459|ref|YP_002375788.1| hypothetical protein PCC7424_0454 [Cyanothece sp. PCC 7424]
gi|218170187|gb|ACK68920.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 357
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++ SN A + V ++ +K+ +F ++G++ + + KY A+ F+Q L +P
Sbjct: 9 VMASPSNHANLRPELLV--VANNKASETEF-YNQGVSLLKQKKYQEALKQFNQALNINPN 65
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y +A RG ++ + A +D+ A+Q + EA+ RG R ALG + A+ D +
Sbjct: 66 YTQAYTKRGLTYYHLKQYQEAFNDYNRAVQLDAKFPEAYTYRGLLRHALGNDIGALTDYN 125
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+A+E + N A+ + RG+ + D A++D + + L+ + AY G+A S G+Y
Sbjct: 126 RAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNPKYAEAYNNRGVAHSIAGDY 185
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
KA E + KAIQLD N+ +A+ + L A+ L +D + S Y+ RG+
Sbjct: 186 AKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGI 245
Query: 594 LLHGLGQHKKAIKDLS 609
+ L +++KAI D S
Sbjct: 246 AYYQLKEYQKAIADYS 261
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G A++ +++ ++ Y EA RG + + + AI D+T+AI NP
Sbjct: 107 RGLLRHALGNDIGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNP 166
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG A + G+ +A++D SKA++ + N RGI + ++ AA+ D
Sbjct: 167 KYAEAYNNRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDY 226
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ S Y G+A + EY+KA + + I+ D N + Q L +
Sbjct: 227 NHALELDSQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKD 286
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
++ AL+ + ++ AY RGLL + +G K ++DL +
Sbjct: 287 AQGALDDYNLAITKKTDYADAYFNRGLLFYQVGNQSKFVEDLEKAA 332
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G YA A+ + + ++ D Y +A RG +A E AAI D+ A++ +
Sbjct: 174 NRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELD 233
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG A L E +AI D S+ ++ +PNS + R + + KD A++D
Sbjct: 234 SQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDD 293
Query: 506 LSACVKLDKENKSAYTYLGLALSSIG 531
+ + + AY GL +G
Sbjct: 294 YNLAITKKTDYADAYFNRGLLFYQVG 319
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + RGI + G+Y +AI ++ L+ D RG A +E
Sbjct: 193 SKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGIAYYQLKE 252
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D++E I+ +P++ + R AR L ++ A+ D + A+ + + AD RG
Sbjct: 253 YQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDDYNLAITKKTDYADAYFNRG 312
Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
++ ++ + + VEDL L
Sbjct: 313 LLFYQVGNQSKFVEDLEKAASL 334
>gi|359461156|ref|ZP_09249719.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 670
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD---FRLSRGI 389
I+ SS T S +F + + + +R+ + + S++ +S D L RG
Sbjct: 328 IATRMSSSETSGESATAF---IRRGDAKYNRRDYEDAIADYSEAIRLSPDSAQAYLGRGN 384
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+ +Y A+ +D+ LK DP Y A GRG + +++ E AI D+ +AIQS+P
Sbjct: 385 ARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPRFA 444
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
A+ RG ++AL E AI+D S+A+ P +RG+ ++ A+ED S
Sbjct: 445 LAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIEDYSET 504
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L+ N SA+ G+A +GE ++A + +AI+L+ A+ + + L ++E
Sbjct: 505 LRLNPGNDSAFNNRGVARYKLGESRQAIKDFTEAIRLNPQNSFAYCNRGESKLKLKDAEG 564
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A++ + + +D + S AY RG H L ++K AI+D +
Sbjct: 565 AIKDCSETIRLDPQSSFAYSARGKANHALKRYKAAIEDYT 604
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI F Q ++ +P Y A + RG A+A AI D++E ++ NP A+ RG A
Sbjct: 462 AAIEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIEDYSETLRLNPGNDSAFNNRGVA 521
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
R LGES +AI+D ++A+ P ++ RG K KD A++D S ++LD ++
Sbjct: 522 RYKLGESRQAIKDFTEAIRLNPQNSFAYCNRGESKLKLKDAEGAIKDCSETIRLDPQSSF 581
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
AY+ G A ++ YK A E + +A+ ++ WG+
Sbjct: 582 AYSARGKANHALKRYKAAIEDYTQALTIN----SGWGN 615
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A+ YA AI + + L+ +P A RG AR E AI DFTEAI+
Sbjct: 482 LQRGVAKAALTNYAGAIEDYSETLRLNPGNDSAFNNRGVARYKLGESRQAIKDFTEAIRL 541
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG+++ L ++ AI+D S+ + +P S+ RG N K + AA+E
Sbjct: 542 NPQNSFAYCNRGESKLKLKDAEGAIKDCSETIRLDPQSSFAYSARGKANHALKRYKAAIE 601
Query: 505 DLSACVKLD 513
D + + ++
Sbjct: 602 DYTQALTIN 610
>gi|193213585|ref|YP_001999538.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
gi|193087062|gb|ACF12338.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
8327]
Length = 314
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 106/224 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI G Y AI +F Q L+ P EA RG AR+ +L AI D+T+ IQ
Sbjct: 34 VDRGIEIGQRGDYDGAIELFSQALRLSPNNAEAYYNRGLARSVIGDLNGAIDDYTQTIQR 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + EA+ RG RAALG EA+ D+S A+ EP A + + RG V ++ A+
Sbjct: 94 KPRSFEAYNNRGFTRAALGRYAEALVDISLAIAIEPKMAQLYNNRGAVRMSMSNYRGAIA 153
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S+ + LD AY GLA G+ + A+++D + AW +
Sbjct: 154 DFSSAIDLDPVLAGAYNNRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRGNARVSK 213
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+E +VL +D A + R LG H A+ DL
Sbjct: 214 DDVQGAVEDYTKVLVLDPEMVAARNNRAFARLTLGDHAGALSDL 257
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ +G +I F ++ DP Y A RG AR + +++ A+ D+T+ + +
Sbjct: 171 NRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRGNARVSKDDVQGAVEDYTKVLVLD 230
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A R AR LG+ A+ DL + +E P+ A + RG+V D A+ D
Sbjct: 231 PEMVAARNNRAFARLTLGDHAGALSDLDRVVEAFPDDATGWYNRGVVRKVAGDRLGAIAD 290
Query: 506 LSACVKL 512
L+ +L
Sbjct: 291 LTRAAEL 297
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA+ L +RGI + D++ A+E S ++L N AY GLA S IG+ A + +
Sbjct: 29 SAEELVDRGIEIGQRGDYDGAIELFSQALRLSPNNAEAYYNRGLARSVIGDLNGAIDDYT 88
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ IQ EA+ + L +AL + + I+ + ++ Y+ RG + + +
Sbjct: 89 QTIQRKPRSFEAYNNRGFTRAALGRYAEALVDISLAIAIEPKMAQLYNNRGAVRMSMSNY 148
Query: 602 KKAIKDLSS 610
+ AI D SS
Sbjct: 149 RGAIADFSS 157
>gi|354569225|ref|ZP_08988381.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353538880|gb|EHC08390.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 666
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 123/228 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ Y +AI+ +++ LK +P +A + RG AR ++++ A++D+ +A
Sbjct: 310 DAYYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQA 369
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP+ + + RG AR+A G+ A+ D ++A++F PN + RG+ ++ D
Sbjct: 370 LKINPNYDKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D + +K++ AY G+ALS G+ +KA + + I+L ++ +A+ +
Sbjct: 430 EIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTL 489
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL N + A Q + + + KAY+ RGL + LG + AI D +
Sbjct: 490 YDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYN 537
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 123/230 (53%), Gaps = 4/230 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+A+ A++ ++Q LK +P Y + RG AR+ + + A++D+ +A
Sbjct: 344 DAYLNRGLARYELKDIQGAMADYNQALKINPNYDKGYYNRGLARSASGDKKGALADYNQA 403
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ +A+ RG R LG+ I D ++A++ PN A + RGI + D
Sbjct: 404 IKFNPNYDKAYYNRGLTRYELGDKQGEIDDYNQAIKINPNYALAYYNRGIALSEKGDTQK 463
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
A++D + +KL + AY Y GL L +G + A +AI+L N+ +A+ + LT+
Sbjct: 464 ALDDFNQTIKLRPDYTDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTR 523
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L + + A+ Q L I+ +++ AY RGL LG + AI D +
Sbjct: 524 Y--ELGDKQGAITDYNQALKINPKYANAYLNRGLTRADLGDRQGAIADYN 571
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + Q ++ +P Y A RG AR+ + + AI+D+T+ ++ NP +A+ RG
Sbjct: 257 YQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYNRG 316
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L AI D +++L+ PN+ D RG+ ++ KD A+ D + +K++
Sbjct: 317 LVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINPNY 376
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
Y GLA S+ G+ K A + +AI+ + N+ +A+ + LT++ +L + + ++
Sbjct: 377 DKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRY--ELGDKQGEIDDY 434
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + I+ ++ AY+ RG+ L G +KA+ D +
Sbjct: 435 NQAIKINPNYALAYYNRGIALSEKGDTQKALDDFN 469
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 111/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G I ++Q +K +P Y A RG A + + + + A+ DF + I+
Sbjct: 416 NRGLTRYELGDKQGEIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLR 475
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG LG A D ++A++ PN + RG+ ++ D A+ D
Sbjct: 476 PDYTDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITD 535
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + +AY GL + +G+ + A + +A++ ++ +A+ + Y DL
Sbjct: 536 YNQALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLK 595
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N ++AL Q + I+ +++ AY+ R L LG K A+ D
Sbjct: 596 NLQQALADFNQAIKINSKYANAYYNRALTRRDLGDKKGALADF 638
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI+++T+AI+ NP A+ RG AR+ +G+ AI D ++ ++ P D +
Sbjct: 255 KDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYN 314
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+V ++ K++ AA+ D + +K++ + AY GLA + + + A + +A++++
Sbjct: 315 RGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINP 374
Query: 549 NFLEAWGHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
N+ + + + + LA S + AL Q + + + KAY+ RGL + LG +
Sbjct: 375 NYDKGY-----YNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429
Query: 604 AIKDLS 609
I D +
Sbjct: 430 EIDDYN 435
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + RG+ + G A + F+Q +K P Y +A RG R + + AI+D+ +
Sbjct: 479 TDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQ 538
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ NP A+ RG RA LG+ AI D ++AL+++P+ + RGI F K+
Sbjct: 539 ALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQ 598
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-----EEAHLKAIQLDRNFLE 552
A+ D + +K++ + +AY L +G+ K A + A L Q + N+ E
Sbjct: 599 QALADFNQAIKINSKYANAYYNRALTRRDLGDKKGALADFKQAAELYRQQNNNNYYE 655
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ KD+ A+ + + ++L+ +AY G+A S IG+ + A + + ++++ +A
Sbjct: 252 YRNKDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDA 311
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y +L N + A+ + L I+ AY RGL + L + A+ D +
Sbjct: 312 YYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYN 367
>gi|167378211|ref|XP_001734716.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
gi|165903665|gb|EDR29120.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
SAW760]
Length = 912
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 122/230 (53%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F LK+ P A +GRGTA A E AI DFT
Sbjct: 202 IDKELAMGYLYVNNNRVKEAVDYFTVFLKKYPNVVGAFLGRGTALAMLSNFEKAIQDFTS 261
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 262 AIKCDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 321
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 322 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 381
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 382 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFT 431
>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 788
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAA 434
+V+ L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A
Sbjct: 52 NVNEELAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGMAYGKKSLQDIKNADLA 111
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + I P+ E +++R + + LG EA+ DLSKA++ +P SA + RG + F
Sbjct: 112 LYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSKAIQLQP-SARLYRHRGTLLF 170
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ AA+ED ++L K A Y GL G K+A E +A++L +F++A+
Sbjct: 171 ISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDAY 230
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI +
Sbjct: 231 KSLGQAYRELGDFESAMESFQRALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 284
>gi|194578961|ref|NP_001124099.1| tetratricopeptide repeat protein 13 precursor [Danio rerio]
gi|190338937|gb|AAI63293.1| Zgc:194598 [Danio rerio]
Length = 826
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 124/229 (54%), Gaps = 6/229 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A+ + +
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELS 172
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P+ E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 173 RVIALEPNRPEVYEQRAEILSPLGRISEALLDLTKAIQLQP-SARLYRHRGTLLFISEDY 231
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ED ++L K A Y GL G K+A E +A++L +F++A+ L Q
Sbjct: 232 MAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKSDFIDAYKSLGQ 291
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI +
Sbjct: 292 AYRELGDIENAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYMAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL + N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDIENAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|374812493|ref|ZP_09716230.1| hypothetical protein TpriZ_01350 [Treponema primitia ZAS-1]
Length = 343
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ ++S + ++RGI ++ Y SAI ++Q ++ +P PEA RG+A A + E A+
Sbjct: 24 ADNLSYNEYINRGILYADQKNYDSAIGYYNQAIRLNPNLPEAYNNRGSAYAVKGEQVWAL 83
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DFTEAI+ P+ A+ RG G+ A+ D S+A+ +P A RG +
Sbjct: 84 ADFTEAIRLKPNYTFAYNNRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQ 143
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
++ A+ D ++L AY G A ++ GEY KA + +AI+++ N+ EA+
Sbjct: 144 KGEYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYI 203
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRF----SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ Y D+ + + LE +VL I+ + +K+Y RGL + +G++++A+ D +
Sbjct: 204 NRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEA 263
Query: 612 SRTMMPHL 619
+ + P+L
Sbjct: 264 IK-LRPNL 270
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G Y A+S F Q + DP Y +A RG A + E E AISD+ +AI+ +
Sbjct: 102 NRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLS 161
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A A GE +A D ++A+ PN A+ RG + + N +ED
Sbjct: 162 PSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYINRGNIYYDIGYTNRGLED 221
Query: 506 LSACVKLD----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ + ++ + +Y GLA +++GEY++A + +AI+L N + H Y
Sbjct: 222 YTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEAIKLRPNLAVVFRHRGVSY 281
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+L + A+E + ++ ++ AY RG G + +A D R
Sbjct: 282 TNLGEYDLAIEDFTHAIILNPNYALAYINRGNAYSQKGLYDQARIDYHQAVR 333
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A V +G+Y AIS +DQ ++ P Y A RG A A + E + A +D+ +AI+ N
Sbjct: 136 NRGDAWVQKGEYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRIN 195
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----FEPNSADILHERGIVNFKFKDFNA 501
P+ EA+ RG +G + ++D ++ L+ + P+ A RG+ ++
Sbjct: 196 PNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRR 255
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +KL + + G++ +++GEY A E AI L+ N+ A+ + Y
Sbjct: 256 ALTDYNEAIKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINRGNAY 315
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYH 589
++A Q + I+ ++ Y+
Sbjct: 316 SQKGLYDQARIDYHQAVRINPKYGAIYY 343
>gi|348538370|ref|XP_003456665.1| PREDICTED: tetratricopeptide repeat protein 13 [Oreochromis
niloticus]
Length = 826
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 6/229 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A+ +
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELN 172
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I PS E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 173 RVITLEPSWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDY 231
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ED ++L K A Y GL G K+A E +A++L +F++A+ L Q
Sbjct: 232 VAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQ 291
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y++L + E A+E Q+ L +++ ++ LRG++L+ G ++AI +
Sbjct: 292 AYRELGDFESAMESFQKALMLNQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDFESAMESFQKALMLNQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|428319962|ref|YP_007117844.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428243642|gb|AFZ09428.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 346
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G Y +AI FD+IL+ +P +A RG + ++ + AI+D ++A+ NP
Sbjct: 9 RGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A LGE +AI+DL+ AL +PNS I + RG+V ++ A+ED
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ N Y G A +GE + A E + ++L+ +++A+ + Y L +
Sbjct: 129 NRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +A+ L ID + AY+ RG + + L Q + AI+D
Sbjct: 189 NTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDF 230
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + EAAI DF +Q NP+ +A+ RG + + +AI DLS+AL+ P
Sbjct: 9 RGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEA 539
N + RG + A+EDL+ C +K N A Y GL L+++G Y++A E
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLN-CALANKPNSHAIYNNRGLVLANLGNYEEAIED 127
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +A+ ++ N + + + + Y L E A E Q L ++ ++ KAY RGL H LG
Sbjct: 128 YNRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQLG 187
Query: 600 QHKKAIKDLSSG 611
+ +A+ D ++
Sbjct: 188 DNTQAMADYNTA 199
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Y AI+ Q L +P + EA + RG A E E AI D A+ +
Sbjct: 42 NRGLVYYYMKDYQKAIADLSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANK 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ + RG A LG EAI+D ++AL N+ + RG + + AA E+
Sbjct: 102 PNSHAIYNNRGLVLANLGNYEEAIEDYNRALSINSNNYKTYYNRGRAYYLLGEKEAATEN 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY GL +G+ +A + A+ +D + A+ + L
Sbjct: 162 FNQTLRLNPKYIKAYINRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLK 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+E + + +D + KAY RGL L+ LG A KD
Sbjct: 222 QMQLAIEDFDKAVELDPNYVKAYLNRGLALYKLGDIAAANKDF 264
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++RG+ + K ++ AA++D ++L+ + AY GL + +Y+KA +A+
Sbjct: 6 FYKRGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF EA+ + ++ L EKA+E L L Y+ RGL+L LG +++AI
Sbjct: 66 INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125
Query: 606 KDLS 609
+D +
Sbjct: 126 EDYN 129
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ G A++ ++ L DP A RG R ++++ AI DF +A++
Sbjct: 177 INRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDFDKAVEL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG A LG+ A +D +
Sbjct: 237 DPNYVKAYLNRGLALYKLGDIAAANKDFYHVM 268
>gi|334120659|ref|ZP_08494738.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333456261|gb|EGK84896.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 346
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G Y +A+ FDQIL+ +P +A RG + ++ + AI+D ++A+ NP
Sbjct: 9 RGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A LGE +AI+DL+ AL +PNS I + RG+V ++ A+ED
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ N Y G A +GE + A E + ++L+ +++A+ + Y L +
Sbjct: 129 NRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +A+ L ID + AY+ RG + + L Q + AI+D
Sbjct: 189 NTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDF 230
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + EAA+ DF + +Q NP+ +A+ RG + + +AI DLS+AL+ P
Sbjct: 9 RGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEA 539
N + RG + A+EDL+ C +K N A Y GL L+++G Y++A E
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLN-CALANKPNSHAIYNNRGLVLANLGNYEEAIED 127
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +A+ ++ + + + + + Y L E A E + L ++ ++ KAY RGL H LG
Sbjct: 128 YNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLG 187
Query: 600 QHKKAIKDLSSG 611
+ +AI D ++
Sbjct: 188 DNTQAIADYNTA 199
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G Y AI +++ L + + RG A E EAA +F E ++ N
Sbjct: 110 NRGLVLANLGNYEEAIEDYNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLN 169
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG LG++ +AI D + AL +P + + RG V +K K A+ED
Sbjct: 170 PKYIKAYINRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIED 229
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
VKLD AY GLAL +G+
Sbjct: 230 FDKAVKLDPNYVKAYLNRGLALYKLGD 256
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +A F++ L+ +P Y +A I RG + AI+D+ A+ +
Sbjct: 144 NRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLGDNTQAIADYNTALGID 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG R L + AI+D KA++ +PN RG+ +K D AA D
Sbjct: 204 PQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRGLALYKLGDVTAANRD 263
Query: 506 LSACVKLDKENKSAYTY 522
+ ++ E AY Y
Sbjct: 264 FYHVMCINAE---AYLY 277
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++RG+ + K ++ AA+ED ++++ + AY GL + +Y+KA +A+
Sbjct: 6 FYKRGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF EA+ + ++ L EKA+E L L Y+ RGL+L LG +++AI
Sbjct: 66 INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125
Query: 606 KDLS 609
+D +
Sbjct: 126 EDYN 129
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ G AI+ ++ L DP A RG R ++++ AI DF +A++
Sbjct: 177 INRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG A LG+ A +D +
Sbjct: 237 DPNYVKAYLNRGLALYKLGDVTAANRDFYHVM 268
>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1409
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 120/221 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+ + G+Y A++ FD+ L+ P Y E + RG A + E E A++ + +A++
Sbjct: 182 LIRGVTLYHLGEYEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEI 241
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +RG A A LGE +A+ KALE +P+ ++ + RG++ ++ AV
Sbjct: 242 KPDYHEAWCKRGVALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVA 301
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ + A+ Y G+AL +GEY++A ++ KA+++ + +A + +L
Sbjct: 302 SFDKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSNWGVTLGNL 361
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+KA+ + L I +A+ RG+ L LG+++KA+
Sbjct: 362 GEYQKAVASFDKALEIKPDDHEAWCKRGVTLVHLGEYQKAV 402
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G Q N G +A AI+ FD+ L+ P Y E + RG E E A++ F +A++
Sbjct: 148 FNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKALEF 207
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W RG A LGE +A+ KALE +P+ + +RG+ ++ AV
Sbjct: 208 KPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQAVA 267
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+++ + GL L +GEY+KA + KA+++ N +AW G+L
Sbjct: 268 SYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPNDYDAWHYRGVALGYL 327
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ Q +A+ KALE I + +A G+ L LG+++KA+
Sbjct: 328 GEYEQAVASYNKALE-------IKPEYHQALSNWGVTLGNLGEYQKAV 368
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I D+ + RG+A N G+Y A++ +D+ L+ P Y E RG
Sbjct: 231 AVASYDKALEIKPDYHEAWCKRGVALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLL 290
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E + A++ F +A++ P+ +AW RG A LGE +A+ +KALE +P
Sbjct: 291 VHLGEYQKAVASFDKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQA 350
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L G+ ++ AV +++ ++ A+ G+ L +GEY+KA + KA++
Sbjct: 351 LSNWGVTLGNLGEYQKAVASFDKALEIKPDDHEAWCKRGVTLVHLGEYQKAVASFDKALE 410
Query: 546 LDRNFLEAW--------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ N +AW H Q+ Q +A+ +KAL+ I +A++ RG+ L
Sbjct: 411 IKPNDYDAWCNRGVVLCDHFRQYEQAVASYDKALQ-------IKPDKYEAWNNRGVALGN 463
Query: 598 LGQHKKAI 605
LG++++A+
Sbjct: 464 LGEYEQAV 471
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 124/242 (51%), Gaps = 15/242 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQV-NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++ + K D +RGI N G+Y A++ F++ L+ P Y +A RG A E
Sbjct: 510 KVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGE 569
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A++ + +A++ P E W +RG LGE +A+ KAL+F+P+ + RG
Sbjct: 570 YEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYGRG 629
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + AV + ++ + + G AL+++GEY++A ++ KA+++ ++
Sbjct: 630 VTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKPDY 689
Query: 551 LEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+AW HL ++ Q + + +KALE DK +A+ RG++L LG++++
Sbjct: 690 YDAWCNRGVALDHLGEYEQAVTSYDKALE-----FKPDKY--EAWCNRGVVLCDLGEYEQ 742
Query: 604 AI 605
A+
Sbjct: 743 AV 744
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y A++ +D+ LK P +A RG + E E A++ + + ++
Sbjct: 456 NRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVASYDKVLEFK 515
Query: 446 PSAGEAWKRRGQARA-ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG LG +A+ +KALE +P+ D RG+ ++ AV
Sbjct: 516 PDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVA 575
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ ++ + G+ L +GEY++A ++ KA++ ++ +AW L
Sbjct: 576 SYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHL 635
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+E+A+ + L + + ++ RG L+ LG++++A+
Sbjct: 636 GENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAV 676
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V +K+ I D+ +RG+A + G+Y A++ +D+ L+ P E RG
Sbjct: 539 AVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTL 598
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E E A++ + +A++ P +AW RG LGE+ +A+ +KALEF+P+ ++
Sbjct: 599 DHLGEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHLGENEQAVASYNKALEFKPDYHEV 658
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG ++ AV +++ + A+ G+AL +GEY++A ++ KA++
Sbjct: 659 WNSRGNALNNLGEYEQAVASYDKALEIKPDYYDAWCNRGVALDHLGEYEQAVTSYDKALE 718
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ EAW + DL E+A+ + L I + + RG+
Sbjct: 719 FKPDKYEAWCNRGVVLCDLGEYEQAVASYDKALEIKPDLHEVWINRGI 766
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 16/228 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSN 445
RG+ V+ G+Y A++ FD+ L+ P +A RG R+ E A++ + +A+Q
Sbjct: 388 RGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASYDKALQIK 447
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LGE +A+ KAL+ +P+ RG+ ++ AV
Sbjct: 448 PDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVAS 507
Query: 506 LSACVKLDKENKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
++ + A+ G+ L ++G Y++A + KA+++ ++ +AW HL
Sbjct: 508 YDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHL 567
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ Q +A+ +KALE I + + RG+ L LG++++A+
Sbjct: 568 GEYEQAVASYDKALE-------IKPDDHETWCKRGVTLDHLGEYEQAV 608
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 18/237 (7%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ +D+ L+ P EA RG A E E A++ + +A++ P +A R
Sbjct: 432 QYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNR 491
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDK 514
G LGE +A+ K LEF+P+ D + RGI+ + AV + +++
Sbjct: 492 GVTLGYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKP 551
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
+ A+ G+AL +GEY++A ++ KA+++ + E W HL ++ Q +A+
Sbjct: 552 DYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASY 611
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
+KAL+ + KA++ RG+ L LG++++A+ + + P H +WN
Sbjct: 612 DKALK-------FKPDYHKAWYGRGVTLDHLGENEQAVASYNK-ALEFKPDYHEVWN 660
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
TE +S + W +G + G+ AI KALEF+P+ ++ RG+ + +
Sbjct: 134 TEEDESATDKAKVWFNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGE 193
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ AV ++ + + G AL +GEY++A ++ KA+++ ++ EAW
Sbjct: 194 YEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRG 253
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A+ + L I + + + RGLLL LG+++KA+
Sbjct: 254 VALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAV 300
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ + G+ A++ +++ L+ P Y E RG A E E A++ + +A++
Sbjct: 627 GRGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIK 686
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LGE +A+ KALEF+P+ + RG+V ++ AV
Sbjct: 687 PDYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWCNRGVVLCDLGEYEQAVAS 746
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+++ + + G+A
Sbjct: 747 YDKALEIKPDLHEVWINRGIA 767
>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 1057
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 141/606 (23%), Positives = 267/606 (44%), Gaps = 67/606 (11%)
Query: 28 RVDSVMASAITARIELAK-LCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHK 86
+VD++ A+ EL ++ +++KAI I D A +Y NR S+ +
Sbjct: 305 QVDNIYLKRGVAKDELGNHQGAIADYTKAIEI-DPQDALAYN-----NRGVAKSKSNDFQ 358
Query: 87 HVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLEL 146
I DC KA+++D AY +G + LG A W+K E +A+L L+
Sbjct: 359 GSISDCTKAIEIDSKYAFAYRNRGHSKKELGDLIGASEDWKKAAELGDQGAAEL---LKE 415
Query: 147 EELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRD 206
E L T + D+ M +T+ + N +D + D+ D+ +
Sbjct: 416 ERLKTGSLIDQ-----------MFQVTIGKQSSNESDGL----------DLSDTGDTNGK 454
Query: 207 VSETCSKSSHDPDLCNGRS---------DEAKGGSSVPVSKSGLHINGK------LREVS 251
+ E +P+ + S D+ +G ++ L IN +R
Sbjct: 455 IKELTKVIELNPNYADAYSLRGVAKFQLDDYQG--ALEDFDYALEINPNDAETYFMRGNV 512
Query: 252 ENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKL 311
+ G ++G+ S ++ A EI+ + +D F N + K + G + ++K
Sbjct: 513 KGEIGDTEGAISDYSK--AIEIDPKDADAF--TNRGLAKYDSKDYQGAIAD-----YNKA 563
Query: 312 SSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEA-----KRNK 366
L D+ N+ K + D++ + + ++S L + +N ++
Sbjct: 564 IEIDPQLADA-YNNRGLVKDELGDHQGAIADYNKS-LDINPQLADAYNNRGLAKYDSKDY 621
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ + +KS I+ F L+ RG+A+ G + AI+ +++ ++ P Y A RG
Sbjct: 622 QGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRGN 681
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A++ + + AI+ ++++I+ NP A+ RG A+ LG++ AI D SKA+E P+ A
Sbjct: 682 AKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFA 741
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ RG+ + KD+ A+ D + +++D ++ AY+ G A S +G+ + A + KA
Sbjct: 742 LAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTKA 801
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I++D + + L +++ A+ + + ID + S AY RG LG +
Sbjct: 802 IEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQG 861
Query: 604 AIKDLS 609
AI D +
Sbjct: 862 AIADYT 867
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A+ + G AI+++ + ++ +P Y A RG A+ + + AI+D ++AI+
Sbjct: 677 FNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEI 736
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG A+ + AI D +KA+E +P AD RG D A+
Sbjct: 737 NPHFALAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIA 796
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++D ++ Y G A S +G+ + A + KAI++D +A+ + L
Sbjct: 797 DYTKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHL 856
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLS 609
+++ A+ + + ID + + AY RGL+ LG H+ AI D +
Sbjct: 857 GDTQGAIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYT 902
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RG A+ + G AI+ + + ++ DP +A RG A++ +
Sbjct: 799 TKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGD 858
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQAR-AALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI+D+T+AI+ +P +A+ RG + LG+ AI D +KA+E P ++ + R
Sbjct: 859 TQGAIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKAIEINPQYSNAYYNR 918
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + KD+ A+ D + +++D ++ AY G A S + +Y++A + KAI+++
Sbjct: 919 GNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQ 978
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ + D + + + + + ID +++ AY RG LG K A +D
Sbjct: 979 LALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGACED 1036
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/559 (22%), Positives = 229/559 (40%), Gaps = 82/559 (14%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARI----ELAK-LCSLRNWSKAIRILDSLL 63
++Y I + ++ + +D +A A R EL ++ +++K++ I + L
Sbjct: 546 AKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDI-NPQL 604
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y NR + ++ I D +K+L ++P AY +G A LG + A+
Sbjct: 605 ADAYN-----NRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAI 659
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNAND 183
AD + +E++ A +R + D+ ++ ++ V + N
Sbjct: 660 --------------ADYNKAIEIKPQYANAYFNRG-NAKSDLGDTQGAIAVYSKSIEINP 704
Query: 184 KMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGRS----DEAKGGSSVPVS 237
+ + N K + D+ D S+ + H N R D ++
Sbjct: 705 QYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKDYQGAIADY 764
Query: 238 KSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKA 291
+ I+ K R +++H G + G+ + + A EI+ P D
Sbjct: 765 TKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID------------PKDAP 810
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFK 351
+ R G H L D+ Y+K+ D K SD+ +R +
Sbjct: 811 TYYNR------GYAKSH---------LGDTQGAITDYTKAIEIDPKDSDAYSNRG---YA 852
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSIS---VDFRLSRGIAQVNE-GKYASAISIFDQI 407
L +T + +K+ I D +RG+ + E G + AI+ + +
Sbjct: 853 KSHLGDTQG--------AIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKA 904
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P Y A RG A++ ++ + AI+D+T+AI+ +P A+ RG A++ L + E
Sbjct: 905 IEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQE 964
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI D SKA+E P A + RG+ + KD+ + D + +++D + +AY G A
Sbjct: 965 AIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAK 1024
Query: 528 SSIGEYKKAEEAHLKAIQL 546
+G K A E KA +L
Sbjct: 1025 KELGVLKGACEDWKKAAEL 1043
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 38/271 (14%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGT 423
SK+I +D + +RGI + + G+ Y AI+ +D+ + +P +A + RG
Sbjct: 222 SKAIEIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGH 281
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+ QR+ + AI+DF A+ +P + +RG A+ LG AI D +KA+E +P A
Sbjct: 282 TKLNQRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEIDPQDA 341
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ RG+ K DF ++ D + +++D + AY G + +G+ A E KA
Sbjct: 342 LAYNNRGVAKSKSNDFQGSISDCTKAIEIDSKYAFAYRNRGHSKKELGDLIGASEDWKKA 401
Query: 544 IQLD---------RNFLEAWGHLTQFYQ-----------------DLANSEKALECLQQV 577
+L L+ + Q +Q D ++ ++ L +V
Sbjct: 402 AELGDQGAAELLKEERLKTGSLIDQMFQVTIGKQSSNESDGLDLSDTGDTNGKIKELTKV 461
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++ ++ AY LRG+ L ++ A++D
Sbjct: 462 IELNPNYADAYSLRGVAKFQLDDYQGALEDF 492
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 28/232 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP--MYP-----EALIGRGTARAFQRELEAA 434
D RG+A+ G + AI+ + ++++ DP +Y A RG A+ + A
Sbjct: 158 DVYFFRGMAKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGA 217
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGES-------VEAIQDLSKALEFEPNSADILH 487
I+D+++AI+ +P A+ RG LG+ AI D KA++ P++AD
Sbjct: 218 IADYSKAIEIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYL 277
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG +DF+ A+ D + + +D + + Y G+A +G ++ A + KAI++D
Sbjct: 278 NRGHTKLNQRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEID 337
Query: 548 RNFLEAWGHL-------TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ + F +++ KA+E ID +++ AY RG
Sbjct: 338 PQDALAYNNRGVAKSKSNDFQGSISDCTKAIE-------IDSKYAFAYRNRG 382
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 225/554 (40%), Gaps = 72/554 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCS------LRNWSKAIRILDSLLAQS 66
+ T I + + + +D A A T R LAK S + +++KAI I D LA +
Sbjct: 516 IGDTEGAISDYSKAIEIDPKDADAFTNR-GLAKYDSKDYQGAIADYNKAIEI-DPQLADA 573
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y NR +L H+ I D +K+L ++P L AY +G A + A++ +
Sbjct: 574 YN-----NRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIADY 628
Query: 127 EKGY------------------EHALHQSA--DLKQFLELEELLTAAKQDRSVTCEYDVS 166
K E HQ A D + +E++ A +R + D+
Sbjct: 629 NKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRG-NAKSDLG 687
Query: 167 NSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
++ ++ V + N + + N K + D+ D S+ + H N R
Sbjct: 688 DTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNR 747
Query: 225 S----DEAKGGSSVPVSKSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEIN 274
D ++ + I+ K R +++H G + G+ + + A EI+
Sbjct: 748 GLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID 805
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVH-DKLSSDSAS--------LNDSNTNS 325
+ + + N K+ + + G T+ T + D SD+ S L D+
Sbjct: 806 PKDAPTY--YNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAI 863
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR- 384
Y+K+ D K +D+ +R ++K+ E + + + +K+ I+ +
Sbjct: 864 ADYTKAIEIDPKDADAYSNRG-------LVKD---EELGDHQGAIADYTKAIEINPQYSN 913
Query: 385 --LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RG A+ Y AI+ + + ++ DP A RG A++ ++ + AI+D+++AI
Sbjct: 914 AYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAI 973
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP A+ RG A+ + I D +KA+E +P A+ RG + A
Sbjct: 974 EINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGA 1033
Query: 503 VEDLSACVKLDKEN 516
ED +L E+
Sbjct: 1034 CEDWKKAAELGNED 1047
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G ++ +++ AI D + I+ N A+ +R + LG+ AI D +KA+E +PN
Sbjct: 62 GKSKLEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLKEKLGDHKGAIDDFTKAIEIDPN 121
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG ++ D A+ D + + + K Y + G+A IG + A +
Sbjct: 122 HAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGMAKDQIGNFDGAIADYS 181
Query: 542 KAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
K I++D R+ A+ H + N A+ + + ID + AY+ RG++
Sbjct: 182 KVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAIEIDPKNDSAYNNRGII 241
Query: 595 LHGLGQHK 602
LGQ K
Sbjct: 242 EDDLGQRK 249
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 48/226 (21%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI DFT+AI+ +P+ + RG ++ LG+ AI D + AL P D+ RG+
Sbjct: 106 KGAIDDFTKAIEIDPNHAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGM 165
Query: 492 VNFKFKDFNAAVEDLSACVKLD-------KENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +F+ A+ D S +++D ++ SAY + G A S G A + KAI
Sbjct: 166 AKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAI 225
Query: 545 QLDRNFLEAWGH------------LTQFYQDL--ANSEKALEC----------------- 573
++D A+ + L FY L A+ +KA++
Sbjct: 226 EIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGHTKLN 285
Query: 574 ----------LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L ID + Y RG+ LG H+ AI D +
Sbjct: 286 QRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYT 331
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+AD E G + KDF A+EDL+ ++++ ++ +AY+ +G++K A +
Sbjct: 54 NADEYLESGKSKLEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLKEKLGDHKGAIDDFT 113
Query: 542 KAIQLDRNFLEAWGHLTQFYQ------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
KAI++D N H +Y L + + A+ L I F Y RG+
Sbjct: 114 KAIEIDPN------HAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGMAK 167
Query: 596 HGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLC 630
+G AI D S + P ++ ++R+ C
Sbjct: 168 DQIGNFDGAIADYSK-VIEIDPDQLY---KYRDEC 198
>gi|407042897|gb|EKE41609.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 915
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 204 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 263
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 264 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 323
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 324 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 383
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 384 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFT 433
>gi|449705635|gb|EMD45644.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
KU27]
Length = 917
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFT 435
>gi|67474444|ref|XP_652971.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56469881|gb|EAL47585.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
Length = 917
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 1/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFT 435
>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 847
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG+ +G Y +AI+ +++ ++ +P Y A R
Sbjct: 506 NYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNR 565
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 566 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 625
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ +AY G A S G YK A +
Sbjct: 626 YHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYN 685
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ ++ AY+ RGL G +
Sbjct: 686 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNY 745
Query: 602 KKAIKDLS 609
+ AI D +
Sbjct: 746 EAAIADYN 753
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A R
Sbjct: 438 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 497
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG G AI D ++A+E PN
Sbjct: 498 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPN 557
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG + + ++ AA+ D + ++++ AY G A S G YK A +
Sbjct: 558 YALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYN 617
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ + AY+ RG G +
Sbjct: 618 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 677
Query: 602 KKAIKDLS 609
K AI D +
Sbjct: 678 KAAIADYN 685
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A GR
Sbjct: 472 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGR 531
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G Q EAAI+D+ AI+ NP+ A+ RG A G AI D ++A+E PN
Sbjct: 532 GLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPN 591
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG + ++ AA+ D + ++++ +AY G A S G Y+ A +
Sbjct: 592 YALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 651
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N + A+ + + I+ + AY+ RG G +
Sbjct: 652 RAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 711
Query: 602 KKAIKDLS 609
+ AI D +
Sbjct: 712 EAAIADYN 719
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A R
Sbjct: 540 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 599
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q +AAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 600 GFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPN 659
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ +AY G A S G Y+ A +
Sbjct: 660 YHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 719
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ ++ N E A+ + + I+ + AY+ RG G +
Sbjct: 720 RAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 779
Query: 602 KKAIKDLS 609
+ AI D +
Sbjct: 780 EAAIADYN 787
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 127/251 (50%), Gaps = 3/251 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A ++G Y +AI+ +++ ++ +P Y A R
Sbjct: 574 NYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNR 633
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 634 GFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 693
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ AY GL G Y+ A +
Sbjct: 694 YHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYN 753
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ ++ AY RG LG+
Sbjct: 754 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYKNRGDAYKVLGEK 813
Query: 602 KKAIKDLSSGS 612
+KA D + +
Sbjct: 814 QKAGSDWQTAA 824
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ +G Y +AI+ +++ ++ +P Y A RG A Q EAAI+D+ AI+ N
Sbjct: 428 SRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEIN 487
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A G AI D ++A+E PN A + RG+ + + ++ AA+ D
Sbjct: 488 PNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIAD 547
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A G Y+ A + +AI+++ N+ A+ + ++
Sbjct: 548 YNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQG 607
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N + A+ + + I+ + AY+ RG G ++ AI D +
Sbjct: 608 NYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 651
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
T+ + R LE I+D T + RG G AI D ++A+E PN
Sbjct: 408 TSSQYNRPLEIDINDAT-----------VYYSRGLTHRRQGNYEAAIADYNRAIEINPNY 456
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A + RG + + ++ AA+ D + ++++ AY G A G Y+ A + +
Sbjct: 457 ALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNR 516
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+++ N+ A+ ++ N E A+ + + I+ ++ AY+ RG G ++
Sbjct: 517 AIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYE 576
Query: 603 KAIKDLS 609
AI D +
Sbjct: 577 AAIADYN 583
>gi|410925671|ref|XP_003976303.1| PREDICTED: tetratricopeptide repeat protein 13-like [Takifugu
rubripes]
Length = 824
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAA 434
+++ L+ G + G Y A+ F +L+ DP A+ GRG A ++ Q + + A
Sbjct: 106 NINEELAIGYVLIGNGLYDEAVKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLA 165
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + I P+ E +++R + + LG EA+ DLS+A++ +P SA + RG + F
Sbjct: 166 LYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSRAVQLQP-SARLYRHRGTLLF 224
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ AA+ED ++L K A Y GL G K+A E +A++L +F++A+
Sbjct: 225 ISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDFIDAY 284
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI +
Sbjct: 285 KSLGQAYRELGDFESAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 338
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 18/276 (6%)
Query: 287 PIDKASVNER----HGRQTNGTHDVHDK-----LSSDSASLNDSNTNSESYSKSSISDNK 337
P+D ++NE + NG +D K L D ++ +Y K S+ D K
Sbjct: 101 PVDNQNINEELAIGYVLIGNGLYDEAVKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIK 160
Query: 338 SSD----STESRSKLSFKWDMLKETSNE---AKRNKKFCVTRISKSKSISVDFRL--SRG 388
++D L W + E E + +S++ + RL RG
Sbjct: 161 NADLALYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSRAVQLQPSARLYRHRG 220
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 221 TLLFISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDF 280
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+A+K GQA LG+ A++ KAL + N L RG++ + A+ +
Sbjct: 281 IDAYKSLGQAYRELGDFESAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKR 340
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 CLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 376
>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
Length = 741
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 121/234 (51%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + K D +RG+A N G++ AI+ +D+ L+ P Y EA RG A L
Sbjct: 163 RALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRL 222
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A++ P +AW RG A A LG EAI +ALEF+P+ D + RGI
Sbjct: 223 EEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGI 282
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F A+ ++ ++ A+ Y G+AL ++G +++A ++ KA++ ++
Sbjct: 283 ALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYH 342
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + ++L E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 343 EAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAI 396
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ +RG+A N G++ AI+ +D+ L+ P P+A RG A
Sbjct: 123 AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVAL 182
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + +A++ P EAW RG A LG EAI +ALEF+P+ D
Sbjct: 183 GNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDA 242
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ ++ ++ A+ Y G+AL+++G +++A + +A++
Sbjct: 243 WNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALE 302
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + +L E+A+ + L + +A++ RG+ L LG+ ++AI
Sbjct: 303 FKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAI 362
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P Y EA RG A E AI+ + A++
Sbjct: 109 NRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFK 168
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI KALEF+P+ + + RGI A+
Sbjct: 169 PDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIAS 228
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ Y G+AL+++G +++A + +A++ + +AW + +L
Sbjct: 229 WDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLG 288
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L A++ RG+ L LG+ ++AI
Sbjct: 289 RFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAI 328
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P Y EA RG A LE AI+ + A++ P
Sbjct: 314 RGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKP 373
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG EAI +ALE +P+ + + RG+ F A+
Sbjct: 374 DKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 433
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 434 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 493
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L A++ RG+ L LG+ ++AI
Sbjct: 494 LEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAI 532
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A LE AI+ + A++
Sbjct: 449 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFK 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +ALE +P+ + + RG+ + A+
Sbjct: 509 PDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIAS 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G +++A ++ +A++ + +AW + DL
Sbjct: 569 YDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RG L LG+ ++AI
Sbjct: 629 RLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAI 668
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ +RG+A N G++ AI+ +D+ L+ P P+A RG A
Sbjct: 55 AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNAL 114
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + A++ P EAW RG A LG +AI +ALEF+P+ D
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDA 174
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ F A+ ++ + A+ G+AL ++G ++A + +A++
Sbjct: 175 WYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALE 234
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + +L E+A+ + L A++ RG+ L LG+ ++AI
Sbjct: 235 FKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAI 294
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 415 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ D + RG+ F A+
Sbjct: 475 PDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIAS 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+AL ++G ++A ++ +A++ + +AW G+L
Sbjct: 535 YDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLG 594
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F Q +A+ ++ALE A++ RG L LG+ ++AI
Sbjct: 595 RFEQAIASYDRALEFKPDD-------PDAWYNRGNALDDLGRLEEAI 634
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ AI+ +D+ L+ P P+A RG A E AI+ + A++
Sbjct: 483 NRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIK 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ D + RG+ F A+
Sbjct: 543 PDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIAS 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G AL +G ++A ++ +A++ ++ +AW + DL
Sbjct: 603 YDRALEFKPDDPDAWYNRGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLG 662
Query: 566 NSEKALECLQQVLYIDKRFSKAYH 589
E+A+ Q + I+ + AY+
Sbjct: 663 RLEEAIASYDQAIKINSNSANAYY 686
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P +A RG A A E AI+ + A++ P
Sbjct: 246 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKP 305
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG EAI KALEF+P+ + + RGI A+
Sbjct: 306 DDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASW 365
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 366 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 425
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 426 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAI 464
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A E AI+ + A++ P +AW R
Sbjct: 51 QYQEAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNR 110
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG+ F A+ ++ +
Sbjct: 111 GNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPD 170
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G+AL ++G +++A ++ KA++ ++ EAW + +L E+A+
Sbjct: 171 DPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWD 230
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L A++ RG+ L LG+ ++AI
Sbjct: 231 RALEFKPDDHDAWNYRGIALANLGRFEEAI 260
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 381 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 440
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + + RG+ A+
Sbjct: 441 PDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIAS 500
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 501 YDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLG 560
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L A++ RG+ L LG+ ++AI
Sbjct: 561 RLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAI 600
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ D+ +RGIA N G+ AI+ +D+ L+ P EA RG A
Sbjct: 327 AIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVAL 386
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + A++ P EAW RG A LG EAI +ALE +P+ +
Sbjct: 387 GNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEA 446
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ F A+ +++ + A+ G+AL ++G ++A ++ +A++
Sbjct: 447 WYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALE 506
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + +L E+A+ + L I +A++ RG+ L+ LG+ ++AI
Sbjct: 507 FKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAI 566
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P +A RG A E AI+ + +A++ P
Sbjct: 280 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKP 339
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG EAI +ALE +P+ + + RG+ F A+
Sbjct: 340 DYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 399
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 400 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 459
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 460 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAI 498
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ D+ +RGIA N G+ AI+ +D+ L+ P +A RG A
Sbjct: 191 AIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIAL 250
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A E AI+ + A++ P +AW RG A A LG EAI +ALEF+P+ D
Sbjct: 251 ANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDA 310
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ ++ + A+ G+AL ++G ++A + +A++
Sbjct: 311 WNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALE 370
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + EAW + +L E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 371 IKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAI 430
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + +GT + + + AI+ + A++ P EAW R
Sbjct: 17 RYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNR 76
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ D + RG + F A+ +++ +
Sbjct: 77 GVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPD 136
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G+AL ++G +++A ++ +A++ + +AW G+L +F Q +A+ +
Sbjct: 137 YHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYD 196
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
KALE + +A++ RG+ L LG+ ++AI
Sbjct: 197 KALE-------FKPDYHEAWYNRGIALGNLGRLEEAI 226
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + K D +RG+A N G++ AI+ +D+ L+ P EA RG A L
Sbjct: 503 RALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRL 562
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A++ P +AW RG A LG +AI +ALEF+P+ D + RG
Sbjct: 563 EEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGN 622
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
A+ ++ + A+ G AL +G ++A ++ +AI+++ N
Sbjct: 623 ALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINSNSA 682
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
A+ + Y N E A+E LQ+ + +D +
Sbjct: 683 NAYYNKACCYGLQNNVELAIENLQRAINLDVEY 715
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
Y L + + I D + + A R L +L + +AI D L +
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRG--VALGNLGRFEQAIASYDRALEFKPDDP 172
Query: 71 DIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
D NR L + I DKAL+ P +A+ +G A LGR EEA++ W++
Sbjct: 173 DAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRA 232
Query: 130 YE 131
E
Sbjct: 233 LE 234
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI D L + D N R L + I DKAL+ P +
Sbjct: 284 LANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE 343
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ +G A LGR EEA++ W++ E
Sbjct: 344 AWYNRGIALKNLGRLEEAIASWDRALE 370
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ K + A++ + V L + + + Y G + +Y++A ++ +A+++ ++ EA
Sbjct: 13 YELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEA 72
Query: 554 W-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W G+L +F Q +A+ ++ALE I A++ RG L+ LG+ ++AI
Sbjct: 73 WYNRGVALGNLGRFEQAIASYDRALE-------IKPDDPDAWNNRGNALYNLGRFEQAI 124
>gi|440289940|gb|ELP83394.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
Length = 898
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +L+ G VN GK AI Q L + P I RGTA A A++DF
Sbjct: 185 IDQQLAMGYFLVNNGKLQDAIKYLTQFLVKYPKVAGGYIARGTALAMGGAFNEAVADFGS 244
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI +P +A KRRGQ +G+ EA+ D+ A++ + D+ +RGIV+ +++
Sbjct: 245 AITLDPDNFDAHKRRGQTLIGIGKLPEALADMDAAVKLSKGKDPDVYKQRGIVHQMMRNY 304
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D VK + ++ + GL +++G +++A E +A+ ++ F+E + +L Q
Sbjct: 305 EKARDDFEVVVKKMPGDAVSWNHFGLNNTALGLFREAAEGFGRAVSINPEFVECYVNLAQ 364
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+D ++A + + + A++LRG++L +G H +A K+
Sbjct: 365 LEKDAGQPKRAEGVFKIIFNKVPKHPFAHYLRGVMLQQIGNHIEATKEF 413
>gi|300870119|ref|YP_003784990.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
gi|300687818|gb|ADK30489.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
Length = 616
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 125/226 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ N G + AI ++++++ DP +A RG ++ + + + AI DF +
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + N + Y G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKD 419
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR+ + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E +PN+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------G 555
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ G
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 556 HLTQFYQDLANS------------------------EKALECLQQVLYIDKRFSKAYHLR 591
+ +D N+ E+A++ +++ +D + AY+ R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369
Query: 592 GLLLHGLGQHKKAIKD 607
LG +K++IKD
Sbjct: 370 ANAKRELGLYKESIKD 385
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 34/262 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + AI F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A+++EPN+ + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKD 607
+AY+ RGL + LG +K+A+KD
Sbjct: 466 EAYNNRGLSKNDLGLYKEALKD 487
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K +P + RG A+ E AI D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ +
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K++ + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL ++AL+ + + ++ S Y+ RGL + LG +K+AIKD +
Sbjct: 476 NDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYT 523
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+I K + VD +R A+ G Y +I +D+ + +P Y +A RG A++
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ E+I EA+ G A+ L E+I+ KA+E P ++ + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++D ++L+ + + Y GL S+G YK+A + + KAI+L ++
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYT 533
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+G+ +L ++A+E + + ++ + Y+ RG + G +K+A KD
Sbjct: 534 NAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKD 589
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
+++ L+RG A+ + Y AI +D+I+K D Y +A R A+ REL + +I
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G +
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ ++L AY GL+ + +G YK+A + + K+I+L+ N + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNN 504
Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
LT++ L ++A++ + + + ++ AY RG LGQ+++AI+D
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIED 555
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A +D
Sbjct: 530 PDYTNAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKD 589
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 590 YKKALELDPNNEYA 603
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+I +D+ ++ P Y EA RG ++ + A+ D+ ++I+ NP+ + RG +
Sbjct: 450 SIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTK 509
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+LG EAI+D +KA+E P+ + RG + + A+ED ++L+
Sbjct: 510 YSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYL 569
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
Y G + G YK+A + + KA++LD N
Sbjct: 570 YNDRGWVKKNAGLYKEAFKDYKKALELDPN 599
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD+ +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G A S LG EEA+ K YE ++ AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAI+ D + S +D NR F + LHK I D +K ++LDP + AY +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234
Query: 111 CAFSALGRKEEALSVWEK 128
+ + L +EA+ + K
Sbjct: 235 VSKNYLQLFDEAIKDFNK 252
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ S + L AY GLA S++G +KKA + + KAI+L +N+ +A+ +
Sbjct: 141 YQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRG 200
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++A+E +V+ +D AY+ RG+ + L +AIKD +
Sbjct: 201 FAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKDFN 251
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIE 561
>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 257
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 14/228 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ E KY AI FD++++ P A RG ++ + + AI D+ +AI+ NP+
Sbjct: 10 GLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ LG+ EAI+D KA+E PN +D + RGI + +++D
Sbjct: 70 DIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYD 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
++L+ +AY G+A +G+Y++A + + K I+LD N A+ G+L Q+
Sbjct: 130 KAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQY 189
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + +K++E ++ +S Y+ RG+ LGQ+K A+KD
Sbjct: 190 KEAIKDFDKSIE-------LNPSYSDVYNNRGVSKENLGQYKDALKDY 230
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 93/167 (55%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DF RGIA+ N G+Y AI +D+ ++ +P ++ RG A+ + E +I D+ +
Sbjct: 71 IDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDK 130
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ N + A+ RG A+ LG+ EAI+D K +E +PN ++ + RG+ +
Sbjct: 131 AIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYK 190
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A++D ++L+ Y G++ ++G+YK A + + KA++LD
Sbjct: 191 EAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 111/197 (56%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ N G+Y AI +D+ ++ +P + RG A+ + E AI D+ +AI+
Sbjct: 41 YNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIEL 100
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +++ RG A+ LG+ E+I+D KA+E N ++ + RGI + A++
Sbjct: 101 NPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQYEEAIK 160
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + +AY GLA ++G+YK+A + K+I+L+ ++ + + + ++L
Sbjct: 161 DYDKTIELDPNDSNAYNNRGLAKGNLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENL 220
Query: 565 ANSEKALECLQQVLYID 581
+ AL+ ++ L +D
Sbjct: 221 GQYKDALKDYKKALKLD 237
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 72/127 (56%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
S++ +E G+ FK + + A+E ++L N +AY G++ ++G+YK+A + +
Sbjct: 2 SSEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYD 61
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L+ N ++ + +L E+A++ + + ++ S +Y+ RG+ LGQ+
Sbjct: 62 KAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQY 121
Query: 602 KKAIKDL 608
+++IKD
Sbjct: 122 EESIKDY 128
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRV-----DSVMASAITARIELAKLCSLRNWSKAIRILDSLL 63
++Y L + + I + D+ + + DS I + S++++ KAI L+
Sbjct: 80 AKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIE-LNHNY 138
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ +Y NR L ++ I+D DK ++LDP AY +G A LG+ +EA+
Sbjct: 139 SNAY-----NNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYKEAI 193
Query: 124 SVWEK 128
++K
Sbjct: 194 KDFDK 198
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 50 RNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
R + +AI D ++ + + NR L +K I+D DKA++L+P + Y
Sbjct: 17 RKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYND 76
Query: 109 KGCAFSALGRKEEALSVWEKGYE 131
+G A LG+ EEA+ ++K E
Sbjct: 77 RGIAKYNLGQYEEAIKDYDKAIE 99
>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 660
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 225/549 (40%), Gaps = 73/549 (13%)
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLE-LEELL 150
D++L LDP L +A++L+G E AL+ D + +E E L
Sbjct: 88 LDRSLALDPDLAEAWVLRG--------------------EIALYNLTDREMAVEAFERAL 127
Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNA-NDKMSETSEN----HNKSDICDSSSQSR 205
+D V Y++ N++S L + L A N ++ EN +N+ I + +
Sbjct: 128 GIDPEDGVVW--YELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYE 185
Query: 206 DVSETCSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKST 264
+ + + ++ S DPDL + ++ + L + GS G+
Sbjct: 186 EAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAEL 245
Query: 265 --HASRDASEINRQSSDDFDICNGPIDKASVNERH------GRQTNGTHDVHDKLSSDS- 315
RD + R D + P DKA+ N+R GR L +D
Sbjct: 246 LRALGRDEEALARL---DGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPG 302
Query: 316 ------------ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
A+L S ESY++S D + + +R + F + E
Sbjct: 303 YLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDE------ 356
Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
V + + F L+ RG A G+ A+ +D+ L+ DP Y A
Sbjct: 357 -----AVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG+ + AI F EAI+ NP++ +AW +G A + EA+ KALE +P
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDP 471
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSA---CVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A+ H RG+ D N A E A ++LD E + + G+ S G ++A
Sbjct: 472 GRAETWHHRGVA---LADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEAL 528
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A +LD EAW + L ++++ALE + + L D ++ ++ RG++L
Sbjct: 529 AHFTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTA 588
Query: 598 LGQHKKAIK 606
LG++++A++
Sbjct: 589 LGKNEEALE 597
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAW 452
EG A+S D+ L DP EA + RG + + E A+ F A+ +P G W
Sbjct: 78 EGAIDLALSSLDRSLALDPDLAEAWVLRGEIALYNLTDREMAVEAFERALGIDPEDGVVW 137
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G A + LG EA+Q +++L +P + + RG++ + A +
Sbjct: 138 YELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYEEAASSFERAISS 197
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D + +A+ G AL ++G ++A E + A+ +D + +W + + L E+AL
Sbjct: 198 DPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAELLRALGRDEEALA 257
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI-WN 622
L + D A++ RGL+L LG++++A++ + R +L+ WN
Sbjct: 258 RLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWN 308
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + + A A FD+ L+ DP Y +G E A++ FT A + +P
Sbjct: 480 RGVALADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEALAHFTRAAELDP 539
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG LG++ EA++ + +ALE + A+ + RG+V A+E
Sbjct: 540 GHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTALGKNEEALEAY 599
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ + +D + A+ G +L +G Y++A + + +A++LD
Sbjct: 600 NRTIDIDPAHPRAWNNKGASLYHLGRYREAADCYGRALELD 640
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + + D +R D A R + LA L +L +++++I I S Y
Sbjct: 283 LGRYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWY 342
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR LE + + D AL+++P A+ +G A +ALGR+EEAL ++
Sbjct: 343 ------NRGRALFDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYD 396
Query: 128 K------GYEHALH 135
+ GYE A +
Sbjct: 397 RALEIDPGYEIAWY 410
>gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 260
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 366 KKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ ++ +++ +++ +F +RG + + G AI+ F Q + P A RG
Sbjct: 4 KQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFNRG 63
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A + + AISDFT+ I+ NP+ A+ RG +R+ LG+ AI D + + PN
Sbjct: 64 IAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNF 123
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A + RG+ D A+ D + ++LD + +AY G+A +G+ + A +
Sbjct: 124 AQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQ 183
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ+ NF +A+ + ++ + + A+ Q + I+ F++AY+ RG + LG +
Sbjct: 184 AIQISPNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKE 243
Query: 603 KAIKDLSSGSR 613
AI+D + S+
Sbjct: 244 GAIRDFNKASQ 254
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AIS F Q + +P + + RG R + + AI+DF++ I P A+
Sbjct: 2 GDKQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFN 61
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG+ AI D ++ ++ PN+ + RG D + A+ D + + L+
Sbjct: 62 RGIAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNP 121
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y GLA ++G+ + A ++++LD A+ + D+ + + A+
Sbjct: 122 NFAQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDF 181
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + I F++AY+ RGL H +G + AI D +
Sbjct: 182 TQAIQISPNFAQAYNNRGLARHNMGDKQGAISDFT 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G AIS F Q L+ D P A RG AR + + AI+DFT+AIQ +
Sbjct: 129 NRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQIS 188
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR +G+ AI D ++A++ PN A + RG D A+ D
Sbjct: 189 PNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRD 248
Query: 506 LSACVKL 512
+ +L
Sbjct: 249 FNKASQL 255
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
T++ K +V +RG ++ + G AI+ F ++ +P + + RG AR
Sbjct: 79 FTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNFAQPYYNRGLARHNLG 138
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AISDFT++++ + A+ RG AR +G+ AI D ++A++ PN A + R
Sbjct: 139 DKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQISPNFAQAYNNR 198
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
G+ D A+ D + ++++ AY G + +G+ + A KA QL
Sbjct: 199 GLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFNKASQL 255
>gi|431806834|ref|YP_007233732.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
gi|430780193|gb|AGA65477.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
Length = 616
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 124/226 (54%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ N G + AI ++++++ DP +A RG ++ + + AI DF +
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + N + Y G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKD 419
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 34/262 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + AI F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLELFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A+++EPN+ + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKD 607
+AY+ RGL + LG +K+A+KD
Sbjct: 466 EAYNNRGLSKNDLGLYKEALKD 487
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N +Y AI + + + Y A RG AR+ + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMREYRDAIDYYSKAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E +PN+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------G 555
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ G
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 556 HLTQFYQDLANS------------------------EKALECLQQVLYIDKRFSKAYHLR 591
+ +D N+ E+A++ +++ +D + AY+ R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369
Query: 592 GLLLHGLGQHKKAIKD 607
LG +K++IKD
Sbjct: 370 ANAKRELGLYKESIKD 385
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K +P + RG A+ E AI D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ +
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K++ + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
DL ++AL+ + + ++ S Y+ RGL + LG +K+AIKD +
Sbjct: 476 NDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKA 525
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+I K + VD +R A+ G Y +I +D+ + +P Y +A RG A++
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ E+I EA+ G A+ L E+I+ KA+E P ++ + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++D ++L+ ++ + Y GL S+G YK+A + + KAI+L ++
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYT 533
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+G+ +L ++A+E + + ++ + Y+ RG + G +K+A+KD
Sbjct: 534 NAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 589
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
+++ L+RG A+ + Y AI +D+I+K D Y +A R A+ REL + +I
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G +
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ ++L AY GL+ + +G YK+A + + K+I+L+ + + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNN 504
Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
LT++ L ++A++ + + + ++ AY RG LGQ+K+AI+D
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIED 555
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A++D
Sbjct: 530 PDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 590 YKKALELDPNNEYA 603
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+I +D+ ++ P Y EA RG ++ + A+ D+ ++I+ NP + RG +
Sbjct: 450 SIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTK 509
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+LG EAI+D +KA++ P+ + RG + + A+ED ++L+
Sbjct: 510 YSLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYL 569
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
Y G + G YK+A + + KA++LD N
Sbjct: 570 YNDRGWVKKNAGLYKEALKDYKKALELDPN 599
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD+ +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G A S LG EEA+ K YE ++ AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 477 EFEPNSADILHE------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
E + N D L E G+ +++ A++ S + L AY GLA S++
Sbjct: 113 EIDINDLDTLDEYFDCNTNGVALNNMREYRDAIDYYSKAIDLIDYYALAYYNRGLARSNL 172
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G +KKA + + KAI+L +N+ +A+ + + ++A+E +V+ +D AY+
Sbjct: 173 GFFKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNN 232
Query: 591 RGLLLHGLGQHKKAIKDLS 609
RG+ + L +AIKD +
Sbjct: 233 RGVSKNYLELFDEAIKDFN 251
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAI+ D + S +D NR F + LHK I D +K ++LDP + AY +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234
Query: 111 CAFSALGRKEEALSVWEK 128
+ + L +EA+ + K
Sbjct: 235 VSKNYLELFDEAIKDFNK 252
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 52 WSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGC 111
+SKAI ++D Y NR S L K I+D DKA++L AY +G
Sbjct: 148 YSKAIDLIDYYALAYY------NRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGF 201
Query: 112 AFSALGRKEEALSVWEK 128
A + G +EA+ + K
Sbjct: 202 AKNNAGLHKEAIEDYNK 218
>gi|21674885|ref|NP_662950.1| hypothetical protein CT2075 [Chlorobium tepidum TLS]
gi|21648109|gb|AAM73292.1| TPR domain protein [Chlorobium tepidum TLS]
Length = 297
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 118/225 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + EG Y AI F + ++ P +A RG AR +L AI+D++ +I
Sbjct: 14 IDQGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADYSMSISL 73
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + A+ RG A AALG EA+ D+S+A+ P+ A + + RG + K + A+
Sbjct: 74 DPRSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKAYALAIA 133
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD AY GLA + G+ + A + +A+++D + AW +L + L
Sbjct: 134 DFTRAIALDPLLAGAYNNRGLARNLSGQLQGAVADYREAVRIDPRYKVAWYNLGNAHISL 193
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++++A+E +VL +D A + R LG +K A++DL+
Sbjct: 194 GDAKEAVEDYSKVLVLDPGMLVARNNRAFARLSLGDYKGALEDLN 238
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G R G +AI S+A+ P +AD + RG+ D A+ D S + LD
Sbjct: 16 QGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADYSMSISLDP 75
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G AL+++G Y +A +AI L + + + + + A+
Sbjct: 76 RSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKAYALAIADF 135
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +D + AY+ RGL + GQ + A+ D R
Sbjct: 136 TRAIALDPLLAGAYNNRGLARNLSGQLQGAVADYREAVR 174
>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 708
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI+ ++Q +K +P Y A RG R + + AI+D+T+A++ N
Sbjct: 390 NRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKIN 449
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG +R LG+ A+ D + AL+ PN+A+ + RG KD AA+ D
Sbjct: 450 PNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIAD 509
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ +AY G A +GE +KA + +AI+ D N EA+ + Y DL
Sbjct: 510 YNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLG 569
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
N + A+ Q + I+ ++ AY+ RG + L + A+ D + + ++P+ +
Sbjct: 570 NKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALK-LLPNYAF 624
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 12/271 (4%)
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
+D +R L K LK+ + K N ++ ++ +I DF RG
Sbjct: 287 NDRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNRG-NILYDFDDKRG---------- 335
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A++ ++Q LK +P Y A RG + + + A++D+ AI+ +P EA+ RG
Sbjct: 336 -ALADYNQALKLNPNYSSAYNNRGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNT 394
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
RA LG+ AI D ++A++ PN + RG + D+ A+ D + VK++ + S
Sbjct: 395 RAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSS 454
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G + +G+ + A + A++ + N EA+ + DL +S A+ + +
Sbjct: 455 AYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAI 514
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ +S AY+ RG + LG+ +KA+ D S
Sbjct: 515 KLNPNYSAAYNGRGNAFYYLGEKQKALADYS 545
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ +T +++ I+ ++ + RG + + G Y AI+ + Q +K +P + A GRG
Sbjct: 401 KQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRG 460
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+R + + + A++D+T A+++NP+ EA+ RG AR+ L +S AI D ++A++ PN
Sbjct: 461 NSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLNPNY 520
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ + RG + + A+ D S +K D N AY G +G K A + +
Sbjct: 521 SAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISDYTQ 580
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+++ N+ A+ + DL + + AL Q L + ++ AY+ R + LG +
Sbjct: 581 AIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLE 640
Query: 603 KAIKDLS 609
AI D +
Sbjct: 641 GAIADYN 647
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG ++ G A++ + LK +P EA RG AR+ ++ AAI+D+ EAI+ N
Sbjct: 458 GRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLN 517
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LGE +A+ D S+A++ + N+++ + RG V F + A+ D
Sbjct: 518 PNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISD 577
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G + + + A + +A++L N+ A+ + Y++L
Sbjct: 578 YTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLG 637
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E A+ + + + +++AY RGL + LG+ + I DL
Sbjct: 638 DLEGAIADYNRAIINNSNYAQAYQNRGLARYDLGEQQAGISDL 680
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V++ + + + DF + +G + +G Y AI ++Q + +P Y A RG AR +
Sbjct: 238 AVSQPTPTAPKADDFYI-QGGDKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYL 296
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D+ +AI+ NP A+ RG + A+ D ++AL+ PN + +
Sbjct: 297 GDKQGALKDYNQAIKINPEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYNN 356
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG ++ D A+ D + +K+D N AY G + +G+ + A + +AI+++
Sbjct: 357 RGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINP 416
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N++ A+ + DL + + A+ Q + I+ S AY+ RG + LG + A+ D
Sbjct: 417 NYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRGNSRYYLGDKQGALNDY 476
Query: 609 S 609
+
Sbjct: 477 T 477
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI + +AI NP A+ RG AR LG+ A++D ++A++ P A + R
Sbjct: 264 DYKGAIEAYNQAISINPKYSYAYNDRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNR 323
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + F D A+ D + +KL+ SAY G + ++G+ ++A + AI++D
Sbjct: 324 GNILYDFDDKRGALADYNQALKLNPNYSSAYNNRGNSHYALGDKQRALADYNLAIKVDPG 383
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + L + + A+ Q + I+ + AY+ RG + LG ++ AI D +
Sbjct: 384 NSEAYYNRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYT 443
Query: 610 SGSRTMMPH 618
+ H
Sbjct: 444 QAVKINPNH 452
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
KS + + + +RG + G AIS + Q +K +P Y A RG + +L+ A
Sbjct: 549 KSDANNSEAYYNRGNVYFDLGNKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGA 608
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++D+ +A++ P+ A+ R LG+ AI D ++A+ N A RG+ +
Sbjct: 609 LADYNQALKLLPNYAFAYYNRANVYKNLGDLEGAIADYNRAIINNSNYAQAYQNRGLARY 668
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ A + DL L KE +A Y
Sbjct: 669 DLGEQQAGISDLEIAANLYKEQGNAAAY 696
>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 942
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +N G+Y AI+ F++ L+ P EA + RG A A E E AI+ F +AIQ
Sbjct: 53 NRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIK 112
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + EAW RG A A LGE EAI KA++ +P+ + H G+V ++ A+
Sbjct: 113 PDSYEAWLNRGLALAKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIAS 172
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + G AL+ + EY+KA ++ KA+Q + + W + + DL
Sbjct: 173 YDKALQCKPDLHETWHNRGAALADLREYEKAIASYDKALQFKPDLHKTWHNRGKALGDLG 232
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ + L I +A+ RGL+L LG+++KAI
Sbjct: 233 EYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAI 272
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G G++ AI+ +D+ L+ P A RGTA E E AI+ F +A+Q
Sbjct: 18 FNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQF 77
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + EAW RG A A LGE EAI KA++ +P+S + RG+ K ++ A+
Sbjct: 78 KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ + + GL L +GEY++A ++ KA+Q + E W + DL
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ + L K +H RG L LG+++KAI
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAI 238
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + L+RG+A G+Y AI+ FD+ ++ P EA + RG A A E E AI+
Sbjct: 78 KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +AIQ P E W G LGE EAI KAL+ +P+ + H RG
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ A+ ++ + + G AL +GEY+KA ++ KA+Q+ + EAW
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLS 257
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+L EKA+ + L F A+ RG+
Sbjct: 258 RGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGI 294
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G+Y AI+ +D+ L+ P E RG A A RE E AI+ + +A+Q P
Sbjct: 157 GLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLREYEKAIASYDKALQFKPD 216
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG+A LGE +AI KAL+ +P+ + RG+V + ++ A+
Sbjct: 217 LHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYD 276
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ-FYQD--L 564
++ + A+ G+A + Y L+ D + + LTQ YQ L
Sbjct: 277 KALQFKPDFHDAWLNRGIAAGNSRHYNPEAATFLQFQFPDTSPILPNPTLTQRGYQGALL 336
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ E CLQ + + + + RG++ + G+++ +D +RT
Sbjct: 337 SFQEGLKHCLQDTH--PEGWGRLHQYRGIVHYWQGKYQPNYRDYWRKART 384
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI+ +D+ L+ P + RG A E E AI + +A+Q
Sbjct: 189 NRGAALADLREYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P EAW RG A LGE +AI KAL+F+P+ D RGI + +N
Sbjct: 249 PDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGIAAGNSRHYNP 304
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y Q N+ Y QL + I DKALQ+ P A+ +G A +G EEA++ +
Sbjct: 12 YLAQQWFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASF 71
Query: 127 EKG-------YEHALHQSADLKQFLELEELLT 151
EK YE L++ L + E EE +T
Sbjct: 72 EKALQFKPDSYEAWLNRGLALAKLGEYEEAIT 103
>gi|427737137|ref|YP_007056681.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
gi|427372178|gb|AFY56134.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
Length = 694
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 119/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A Y AI+ F+Q LK +P + RG AR+ ++ + AISD+T+A++ N
Sbjct: 402 NRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRGGARSELKDYQGAISDYTQALRIN 461
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG RA L + AI D ++AL+ P AD + RG V KD+ A+ D
Sbjct: 462 SKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKYADAYYRRGAVRGNLKDYQGAIND 521
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+D + AY+ G+A + +Y+ A + + +AI+++ + A+ + +L
Sbjct: 522 FNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELK 581
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ QV+ I +++ Y+ RG L ++ AI+D +
Sbjct: 582 DYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELKDYQGAIQDYT 625
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 119/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ Y AIS + Q L+ + Y A RG RA ++ + AI+DF +A++ N
Sbjct: 436 NRGGARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFNQALKIN 495
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RRG R L + AI D ++ ++ +P A RG+ ++ KD+ A++D
Sbjct: 496 PKYADAYYRRGAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQD 555
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + +AY G+A + +Y+ A + + + I++ + + + ++L
Sbjct: 556 YTQAIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELK 615
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ QV+ I + ++AY+ RG + ++ AI DL+
Sbjct: 616 DYQGAIQDYTQVIKIHPKLAQAYYRRGFVRGKFKDYQGAINDLN 659
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+++++ + +G+ + + Y AI Q +K +P Y A RG AR+ ++ + AI
Sbjct: 255 AQALTAEDYFLKGVDKYKKKDYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEAI 314
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF +A++ NP EA RG AR+ L + AI D ++AL+ P A+ RG V +
Sbjct: 315 NDFNQALKINPKLAEAHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRGR 374
Query: 496 -FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D+ A+ D + +K++ + AY G A S + +Y++A +A++++ + +
Sbjct: 375 NLHDYQGAINDFNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALKINPKLAKVY 434
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L + + A+ Q L I+ +++ AY+ RG L ++ AI D +
Sbjct: 435 YNRGGARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFN 489
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 30/294 (10%)
Query: 352 WDMLKETSNEAKRNKKFCV---TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
+D + K N + T + ++K + VD +S + QV A A++ D L
Sbjct: 211 YDEINPQVAVVKSNNNLAISIYTFLRQAKVVDVDLGISAPLLQV-----AQALTAEDYFL 265
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
K G + +++ + AI D T+AI+ NP A+ RG AR+ L + EA
Sbjct: 266 K------------GVDKYKKKDYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEA 313
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D ++AL+ P A+ RG KD+ A++D + +K++ + AY G
Sbjct: 314 INDFNQALKINPKLAEAHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRG 373
Query: 529 -SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++ +Y+ A +A++++ EA+G+ + +L + ++A+ Q L I+ + +K
Sbjct: 374 RNLHDYQGAINDFNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALKINPKLAKV 433
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWPFIRRRL 641
Y+ RG L ++ AI D + R +++ N +N+ F R +L
Sbjct: 434 YYNRGGARSELKDYQGAISDYTQALRIN--------SKYAN-AYNSRGFTRAKL 478
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ Y AI + Q +K +P Y A RG AR ++ + AI D+T+ I+ +
Sbjct: 538 NRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIH 597
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG AR L + AIQD ++ ++ P A + RG V KFKD+ A+ D
Sbjct: 598 PKYAYGYNNRGNARRELKDYQGAIQDYTQVIKIHPKLAQAYYRRGFVRGKFKDYQGAIND 657
Query: 506 LSACVKL 512
L+ L
Sbjct: 658 LNIAANL 664
>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 432
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 118/219 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI FDQ + DP + EA +GTA + + AI +AI +P E W
Sbjct: 213 GKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTI 272
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ EAIQ +A+ P A+ + +G+ ++ A++ + ++
Sbjct: 273 KGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP 332
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ A+T G+AL +G+Y +A +A+ +A +++ F EAW + L ++A++
Sbjct: 333 QDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKAC 392
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + I+ +F++A++ +G++L LG++ +AIK SG +
Sbjct: 393 DQAISINPQFAEAWYNKGVVLKALGKYDEAIKAFESGYQ 431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 116/227 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + GKY AI+ +DQ + DP Y A +GTA + + AI +AI +P
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G LG+ EAI+ +A+ +P A+ + +G + ++ A++
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D + +T G+AL +G+Y +A +A+ +AI ++ EAW + L
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGK 316
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A++ Q + I+ + + A+ ++G+ L+ LG++ +AI+ +R
Sbjct: 317 YDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANR 363
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 5/235 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS+D + + +G A + GKY AI DQ + DP A +GT +
Sbjct: 156 QAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGILGKY 215
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI F +AI +P EAW +G A LG+ EAI+ +A+ +P A+ +GI
Sbjct: 216 DEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGI 275
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ A++ + ++ + A+ G+AL+++G+Y +A +A +AI ++
Sbjct: 276 ALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINPQDA 335
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AW DL ++A++ Q I+ +F++A++ +G+ L LG++ +AIK
Sbjct: 336 FAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIK 390
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI +DQ + DP Y A +G A + + AI+ +AI NP AW
Sbjct: 77 GRYDEAIQAYDQAISIDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTI 136
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ EAI +A+ +P A +G ++ A++ + +D
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G L +G+Y +A + +AI +D F EAW + L ++A++
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q + ID + ++ + ++G+ L+ LG++ +AI+
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQ 288
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L +G A V Y AI +DQ + DP A +G A RA R EA I + +AI
Sbjct: 33 LEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRALGRYDEA-IQAYDQAIS 91
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P AW +G+A ALG+ EAI +A+ P A +G + ++ A+
Sbjct: 92 IDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALYDLGKYDEAI 151
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ +D + A++ G AL +G+Y +A +A +AI +D AW +
Sbjct: 152 NAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGI 211
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L ++A++ Q + ID +F++A++ +G L LG++ +AIK
Sbjct: 212 LGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIK 254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G A L EAIQ +A+ +P A +G ++ A++ +
Sbjct: 32 WLEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRALGRYDEAIQAYDQAIS 91
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+D + A++ G AL ++G+Y +A A +AI ++ AW DL ++A+
Sbjct: 92 IDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALYDLGKYDEAI 151
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q + ID +++ A+ +G L LG++ +AIK
Sbjct: 152 NAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIK 186
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL------LAQS 66
L K + I D+ + ++ A A T I+ L L + +AI+ D A++
Sbjct: 314 LGKYDEAIKACDQAISINPQDAFAWT--IKGIALYDLGKYDEAIQAYDQANRINPQFAEA 371
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ N+ + L + I+ CD+A+ ++P +A+ KG ALG+ +EA+ +
Sbjct: 372 W-----YNKGVALTALGKYDEAIKACDQAISINPQFAEAWYNKGVVLKALGKYDEAIKAF 426
Query: 127 EKGYEH 132
E GY+H
Sbjct: 427 ESGYQH 432
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K + I D+ + +D +A T I+ L L + +AI+ D ++ + +I +
Sbjct: 245 RLGKYDEAIKACDQAISIDPQLAETWT--IKGIALYDLGKYDEAIQAYDQAISINPQIAE 302
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
N+ + L + I+ CD+A+ ++P A+ +KG A LG+ +EA+ +++
Sbjct: 303 AWYNKGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQ 360
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
L K + I D+ + +D A A + + L L + +AI+ D ++ + +
Sbjct: 177 HLGKYDEAIKACDQAISIDPQNAYAWYNKGTV--LGILGKYDEAIKPFDQAISIDPQFAE 234
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
N+ +L + I+ CD+A+ +DP L + + +KG A LG+ +EA+ +++
Sbjct: 235 AWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQ 292
>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 799
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 122/237 (51%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
++ I S S + +RG Q + G + AI+ +D+ L+ P A RG A A
Sbjct: 147 SISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADL 206
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AI+++ +A+Q P +AW RG A A LGE EAI + KAL+ +P+ +
Sbjct: 207 GKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWYN 266
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ ++ A+ + +++ + A+ G+AL ++G+Y++A + KA+Q+
Sbjct: 267 RGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDKALQIQP 326
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F +AW DL E+A+ + L F A++ RG+ L LG++++AI
Sbjct: 327 DFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGKYEEAI 383
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + GKY AI+ +D+ L+ P + +A RG A A E E AI+++ +A+Q P
Sbjct: 199 RGVALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQP 258
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A A LGE EAI + KAL+ +P+ + + RG+ + A+ +
Sbjct: 259 DFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANY 318
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + A+ G+AL+ +GEY++A + KA+Q +F AW + DL
Sbjct: 319 DKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGK 378
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGL 593
E+A+ + L I +A+ RG+
Sbjct: 379 YEEAIASFDKALQIKPDLHQAWLNRGI 405
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF +RG+A + G+Y AI+ +D+ L+ P + +A RG A
Sbjct: 212 AIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWYNRGVAL 271
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A E E AI+++ +A+Q P EAW RG A LG+ EAI + KAL+ +P+
Sbjct: 272 ADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDKALQIQPDFHQA 331
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+ ++ A+ + ++ + A+ G+AL+ +G+Y++A + KA+Q
Sbjct: 332 WFMRGVALADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGKYEEAIASFDKALQ 391
Query: 546 LDRNFLEAW 554
+ + +AW
Sbjct: 392 IKPDLHQAW 400
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF +RG+A + G+Y AI+ +D+ L+ P EA RG A
Sbjct: 246 AIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVAL 305
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E AI+++ +A+Q P +AW RG A A LGE EAI + KAL+F+P+
Sbjct: 306 GNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYA 365
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ RG+ + A+ +++ + A+ G+A+ Y
Sbjct: 366 WNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHY 413
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 49/251 (19%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N GKY AI+ +D+ L+ P + +A RG A A E E AI+++ +A+Q
Sbjct: 300 NRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFK 359
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A A LG+ EAI KAL+ +P+ RGI + + +N +
Sbjct: 360 PDFHYAWNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHYNP---E 416
Query: 506 LSACVKLDKENKSAYT---------YLGLALS---------------SIGEYKKA-EEAH 540
+ ++ N S Y G LS G+ +A AH
Sbjct: 417 AATSLQFQFPNTSPILPNPALTQRGYQGELLSYQEGLKHCLQDTHPEGWGQLHQAIGNAH 476
Query: 541 LKAIQLDRNFLEAWGH-LTQFYQDL------ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
K + RN+ ++W +T+++Q L A E LE LQ ++ +
Sbjct: 477 YKEGKYQRNYRDSWDKAVTEYHQALITLTPDAYPELHLEVLQDLIRV------------- 523
Query: 594 LLHGLGQHKKA 604
L GL QH +A
Sbjct: 524 -LLGLNQHTEA 533
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++R A +L +S+ +I++ A++ RG F DF A+ + ++
Sbjct: 135 RKRVSAETSLSDSISSIENSDS------EQAEVWFNRGNQQFDAGDFLGAIANYDKALQF 188
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+N A+ G+AL+ +G+Y++A + KA+Q+ +F +AW + DL E+A+
Sbjct: 189 KPDNHYAWFMRGVALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIA 248
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L I F +A++ RG+ L LG++++AI +
Sbjct: 249 NYDKALQIQPDFHQAWYNRGVALADLGEYEEAIAN 283
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + I D+ +++ A R + LA L ++ N+ KA++I Q
Sbjct: 240 LGEYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQI------QPD 293
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ + NR L ++ I + DKALQ+ P QA+ ++G A + LG EEA++ ++
Sbjct: 294 KHEAWYNRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYD 353
Query: 128 KG 129
K
Sbjct: 354 KA 355
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 15/135 (11%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L K + I D+ +++ A R + LA L ++ N+ KA++I Y
Sbjct: 206 LGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWY 265
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR + L ++ I + DKALQ+ P +A+ +G A LG+ EEA++
Sbjct: 266 ------NRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIA--- 316
Query: 128 KGYEHALHQSADLKQ 142
Y+ AL D Q
Sbjct: 317 -NYDKALQIQPDFHQ 330
>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 383
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 3/244 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V R++ + S ++ RG+A N G +AI ++Q+LK +P A I RG R
Sbjct: 120 VIRLTPNNSEAL---FYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYINRGNLRDALG 176
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +AAI D+ +A++ NP+ EA+ RG R LG+ AI+D ++AL+ PN A R
Sbjct: 177 DKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINPNDAVSYRNR 236
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G D A+ED + +K++ + +Y G ++G+ + A + + +A++++ N
Sbjct: 237 GNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPN 296
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ EA+ + L + + ++ Q L I+ ++KAY+ RG LG +AI D
Sbjct: 297 YAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDFQ 356
Query: 610 SGSR 613
++
Sbjct: 357 QAAK 360
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI +D++++ P EAL RG A + +AAI D+ + ++ NP+ A+
Sbjct: 108 GDYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYIN 167
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG R ALG+ AIQD ++AL+ PN A+ RG+ D A+ED + +K++
Sbjct: 168 RGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINP 227
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +Y G A +G+ K A E + +A++++ N ++ + L + + A++
Sbjct: 228 NDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDY 287
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q L I+ +++AY RG+ LG + I+D +
Sbjct: 288 NQALKINPNYAEAYLNRGVARDTLGDKQAVIQDFN 322
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G +AI ++Q LK +P Y EA + RG R + + AI D+ +A++ NP+ +++
Sbjct: 176 GDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINPNDAVSYRN 235
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG+ AI+D ++AL+ PN A RG + D AA++D + +K++
Sbjct: 236 RGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINP 295
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+A ++G+ + + +A++++ N+ +A+ + Y L + +A+
Sbjct: 296 NYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDF 355
Query: 575 QQVLYI 580
QQ I
Sbjct: 356 QQAAKI 361
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V +R +RG A+ + G AI ++Q LK +P + + RG R + +AAI D+
Sbjct: 230 AVSYR-NRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYN 288
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP+ EA+ RG AR LG+ IQD ++AL+ PN A + RG D
Sbjct: 289 QALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDK 348
Query: 500 NAAVEDLSACVKL 512
A+ D K+
Sbjct: 349 FQAISDFQQAAKI 361
>gi|145536925|ref|XP_001454184.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421929|emb|CAK86787.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 122/234 (52%), Gaps = 14/234 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD ++G A N + AI +++++ +P +A +G A + E AI F
Sbjct: 107 NVDAWHNKGCALGNLNQNEEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFN 166
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI NP +AW +G A L + EAI+ ++A+ P + D H +G K +
Sbjct: 167 EAIYINPKYVDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQY 226
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----- 554
N A+E + + ++++ GL+L+S+ +Y+ A E + +AI + F++AW
Sbjct: 227 NEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGY 286
Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
G+L Q+ E+A+EC + +YI+ ++ A++ +GL L L Q+++AI+
Sbjct: 287 ALGNLNQY-------EEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIE 333
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 111/226 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +G A + +Y AI+ +++++ +P +A +G A + AI + E
Sbjct: 40 VDAWHKKGHALNDFNQYIEAIACYNEVISINPRDEQAWYDKGCALGNLNQYNEAIECYNE 99
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP +AW +G A L ++ EAI+ ++ + P +++G
Sbjct: 100 AISINPKNVDAWHNKGCALGNLNQNEEAIECYNEVISINPRDEQAWYDKGYALGNLNQNE 159
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + + ++ + A+ G AL ++ +Y +A E + +AI ++ ++AW +
Sbjct: 160 EAIECFNEAIYINPKYVDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCA 219
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L +A+EC + + I+++F++ + +GL L L +++ AI+
Sbjct: 220 LGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIE 265
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI +++ + P + +A +G A F + +EA I+ + E I NP +AW
Sbjct: 21 QYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEA-IACYNEVISINPRDEQAWYD 79
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A L + EAI+ ++A+ P + D H +G A+E + + ++
Sbjct: 80 KGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQNEEAIECYNEVISINP 139
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ A+ G AL ++ + ++A E +AI ++ +++AW + +L +A+EC
Sbjct: 140 RDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGCALGNLKKYNEAIECY 199
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + I+ + A+H +G L L Q+ +AI+
Sbjct: 200 NEAISINPKNVDAWHNKGCALGKLNQYNEAIE 231
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 4/215 (1%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y +A +G + E AI + EAI +P +AW ++G A + +EAI +
Sbjct: 5 YVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAIACYN 64
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ + P +++G +N A+E + + ++ +N A+ G AL ++ +
Sbjct: 65 EVISINPRDEQAWYDKGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQN 124
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++A E + + I ++ +AW +L +E+A+EC + +YI+ ++ A++ +G
Sbjct: 125 EEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGC 184
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRN 628
L L ++ +AI + + + ++ P N+ W N
Sbjct: 185 ALGNLKKYNEAI-ECYNEAISINPK---NVDAWHN 215
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD ++G A +Y AI +++ + + + +G + A + E AI +
Sbjct: 209 NVDAWHNKGCALGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYN 268
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI +P +AW ++G A L + EAI+ ++A+ P + + +G+ K +
Sbjct: 269 EAISISPKFVDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQY 328
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+E + + ++ +N SA+ G AL ++ +Y +A + + +AI + F++AW
Sbjct: 329 EEAIECYNEAISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAW 383
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++G A N KY AI +++ + +P +A +G A + AI + E
Sbjct: 176 VDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNE 235
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI N +G + A+L + +AI+ ++A+ P D ++G +
Sbjct: 236 AISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGYALGNLNQYE 295
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + + ++ + +A+ GLAL + +Y++A E + +AI ++ + AW
Sbjct: 296 EAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNEAISINPKNVSAWNGKGCA 355
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYH 589
+L +A++C + + I +F A++
Sbjct: 356 LGNLNQYNEAIKCYNEAISISPKFVDAWY 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD L +G A N +Y AI F++ + +P Y A +G A + E AI + E
Sbjct: 278 VDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNE 337
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI NP AW +G A L + EAI+ ++A+ P D + +
Sbjct: 338 AISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAWYNKA 387
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +++AW + DL E+A+EC + + I +F A+H +G L+ Q+ +AI
Sbjct: 1 MNHKYVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAI 60
>gi|310778588|ref|YP_003966921.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
Length = 363
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 5/238 (2%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D + +RG + G AI+ +D+ +K +P + A RG A+ F +
Sbjct: 100 KAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDY 159
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+++ I +P + A+ RG A+ LGE +I+D +KA+ +P + RG
Sbjct: 160 KGAINDYSKVINIDPKSQVAYNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGF 219
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ KD+ A+ D + ++LD + AY+ G+A + +Y A E + K I+ D ++
Sbjct: 220 TKAQLKDYKGAINDYNKTIELDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYE 279
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ L + ALE +V+ +D F +AY+ RG++ LG A++D
Sbjct: 280 VAYYRRGLVKTKLRDYHGALEDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFG 337
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 371 TRISKSKSISVD--FRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+R K+I +D F+ + RGI++ + G + A+ FD+ ++ DP + A RG +
Sbjct: 60 SRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTK 119
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+LE AI+D+ +AI+ NP A+ RG A+ + AI D SK + +P S
Sbjct: 120 TKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDYKGAINDYSKVINIDPKSQVA 179
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ ++ ++ +++ED + ++LD + K +Y G + + +YK A + K I+
Sbjct: 180 YNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAINDYNKTIE 239
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD +F+ A+ + L + A+E +V+ D + AY+ RGL+ L + A+
Sbjct: 240 LDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKTKLRDYHGAL 299
Query: 606 KDLS 609
+D +
Sbjct: 300 EDYN 303
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 94/164 (57%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G+Y S+I +++ ++ DP Y + RG +A ++ + AI+D+ + I+ +
Sbjct: 182 NRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAINDYNKTIELD 241
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L + A++D +K +E +P+ + RG+V K +D++ A+ED
Sbjct: 242 PDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKTKLRDYHGALED 301
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +KLD K AY G+ + +G++ A E K I+LD N
Sbjct: 302 YNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFGKTIKLDPN 345
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+S+P+ + RG + G+ + + +D K ++ +P RGI DF
Sbjct: 34 IKSDPNEQFEYYNRGLIKYFSGDIIGSRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFEG 93
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
AVED ++LD + AY+ G + +G+ + A + KAI+L+ F A+ G+
Sbjct: 94 AVEDFDKAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAK 153
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
F D A+ +V+ ID + AY+ RGL LG++K +I+D + R
Sbjct: 154 YFSDDYKG---AINDYSKVINIDPKSQVAYNNRGLAKWELGEYKSSIEDYNKAIR 205
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 39 ARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQ 97
A+ EL + S+ +++KAIR LD SY NR F +QL+ +K I D +K ++
Sbjct: 186 AKWELGEYKSSIEDYNKAIR-LDPKYKLSYN-----NRGFTKAQLKDYKGAINDYNKTIE 239
Query: 98 LDPTLLQAYILKGCA 112
LDP + AY +G A
Sbjct: 240 LDPDFVLAYSNRGMA 254
>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
9303]
gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
9303]
Length = 706
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 132/254 (51%), Gaps = 5/254 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPM 413
N K+ K + +K+I +D + +RG+A+ N G Y AI+ +++ + +P
Sbjct: 391 GNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDYQGAIADYNKAITINPQ 450
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ +A RG A+ + + AISD+ +AI+ +P A+ RG +++ L + AI D +
Sbjct: 451 HADAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDYQGAIPDYN 510
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA+E P AD + RGI D A+ D + ++LD ++ A+ G+A ++G++
Sbjct: 511 KAIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHAFAFNNRGIAKDNLGDH 570
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + KAI++D + A+ + DL + + A+ + + I+ +++ AY RG
Sbjct: 571 QGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAINPQYALAYTNRGW 630
Query: 594 LLHGLGQHKKAIKD 607
+ G + A+KD
Sbjct: 631 FKYLQGDFQDALKD 644
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 147/290 (50%), Gaps = 7/290 (2%)
Query: 327 SYSKSSISDNKSSDSTESRS-KLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFR 384
+Y+K +++D + + S +++ +++ ++ E AK+ K I+ +K+I ++ +
Sbjct: 323 AYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQ 382
Query: 385 LS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ RG + Y AI+ +++ ++ DP + RG A+ + + AI+D+
Sbjct: 383 HTGPFNNRGNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDYQGAIADYN 442
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP +A+ RG A+ LG++ AI D +KA+E +P + RG KD+
Sbjct: 443 KAITINPQHADAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDY 502
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + ++++ + A+ G+A + G+++ A + KAI+LD A+ +
Sbjct: 503 QGAIPDYNKAIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHAFAFNNRGI 562
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ + + ID +++ AY+ RG L ++ AI D +
Sbjct: 563 AKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFN 612
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G + AI+ +++ ++ DP Y A RG A++ ++ + AI+DF +AI N
Sbjct: 559 NRGIAKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAIN 618
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + G+ +A++D +KAL PN L RG+ +A +D
Sbjct: 619 PQYALAYTNRGWFKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKD 678
Query: 506 LSACVKLDKENKSAY 520
L L + S Y
Sbjct: 679 LKRASSLGYQGTSQY 693
>gi|186682238|ref|YP_001865434.1| hypothetical protein Npun_R1829 [Nostoc punctiforme PCC 73102]
gi|186464690|gb|ACC80491.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 539
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K S ++ RG+ G Y +AI+ + Q ++ + ++ RG A + LE A
Sbjct: 273 KVTSSDINLYYKRGLTHYQIGDYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEA 332
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+D+T+AI+ NP+ A+K R +AR+ +G++ AI+D ++A++ P+ AD RGI +
Sbjct: 333 INDYTQAIRINPNVAVAYKNRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARY 392
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++ +K++ ++ AY G A S +G+++ A E + +AIQ++ N+ +A+
Sbjct: 393 LL----SSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAY 448
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + DL + E+A+E Q + I+ ++ AY+ RG + + + AI+D
Sbjct: 449 YNRDNAHSDLGDFERAIEDYTQAIQINYNYADAYYNRGNIRLEIADKQGAIEDF 502
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + +++V ++ +R A+ + G AI + Q +K +P Y +A RG AR L
Sbjct: 340 IRINPNVAVAYK-NRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARY----LL 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
++ F +AI+ NP A+K+RG AR+ LG+ AI+D ++A++ PN AD + R
Sbjct: 395 SSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAYYNRDNA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ DF A+ED + ++++ AY G I + + A E KA + R
Sbjct: 455 HSDLGDFERAIEDYTQAIQINYNYADAYYNRGNIRLEIADKQGAIEDFHKAADIYR 510
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 83/156 (53%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F + +N + + + G GE AI + KAL+ + ++ ++RG+ +++
Sbjct: 234 FFQPEYNNEDSNTLYAKLGDEYFEKGEYTNAIVNYGKALKVTSSDINLYYKRGLTHYQIG 293
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ AA+ D S ++++ ++ +Y GLALS +G ++A + +AI+++ N A+ +
Sbjct: 294 DYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEAINDYTQAIRINPNVAVAYKNR 353
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ + +++ A+E Q + I+ ++ AY RG+
Sbjct: 354 AEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGI 389
>gi|344247251|gb|EGW03355.1| Tetratricopeptide repeat protein 13 [Cricetulus griseus]
Length = 677
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ V G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 52 STNEELAIAYVLVGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 112 LFELSRVIALEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L++ +A Y GL G K+A EA +A++ +F++A+
Sbjct: 171 ISEDYATAHEDFEQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAY 230
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 231 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 284
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F+Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFEQSLELNRNQPTAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|434387210|ref|YP_007097821.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018200|gb|AFY94294.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 490
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 14/298 (4%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RGIA+++ G + A++ FD+++ P Y +A GRG R + +AA++DF
Sbjct: 201 NVDAFYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFN 260
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI NP++ A+ R A+ +LG AI D + P A R I+ + D
Sbjct: 261 RAIALNPNSSNAYFNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDK 320
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + +KL+ + AY G+ SSIG + A + +AIQL N+ A+ +
Sbjct: 321 TQAIADYTTALKLNPKLVEAYNNRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGI 380
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
Y KA+ Q + D + + Y RG+ L L +++KA+ D ++ R + P+
Sbjct: 381 VYYVAGEYRKAIADYTQGIASDPKNADLYFNRGVSLAQLQEYQKALADYNTAIR-LQPN- 438
Query: 620 IWNLTRWRNLCFNAWPFIRRRLLCTRLLKSTVSFAGLTLMEILIPSSRNIGAKDCIPR 677
NA + R LL +L ++ + L L + N A + + R
Sbjct: 439 ------------NALAYSNRGLLQAQLQANSAATEDLKTAARLFQAQNNQAAYESVMR 484
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI+ F++ + + +A RG + + AI+D+T A+ NP EA+ RG A
Sbjct: 84 GAIADFNRAIALQSNFVDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFA 143
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
R +G+ A+ D A +P + +GI+ + D A+ + ++LD +N
Sbjct: 144 RLNIGDRAGALADFQAASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVD 203
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A+ G+A +G++ A + I L N+ +A+ + + + +S+ AL + +
Sbjct: 204 AFYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAI 263
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ S AY R + LG AI D
Sbjct: 264 ALNPNSSNAYFNRANAQNSLGNRTGAISD 292
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +RGI + G AI+ + L +P + EA RG AR + A++DF
Sbjct: 100 VDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFARLNIGDRAGALADFQA 159
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A P+ + +G + G+ AI ++A++ +P + D + RGI DF
Sbjct: 160 ASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDAFYNRGIAKLDLGDFT 219
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + L AY G +G+ + A +AI L+ N A+ +
Sbjct: 220 GALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAIALNPNSSNAYFNRANA 279
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
L N A+ +V I+ + A+ R ++ G +AI D ++ + + P L+
Sbjct: 280 QNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAIADYTTALK-LNPKLV 338
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 399 SAISIFDQILKEDPMYPEAL------IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
S I + Q+ ++ P P+ L R R R+ AI+DF AI + +A+
Sbjct: 45 SEIVLARQVTRKTPA-PKNLKTARDFYNRAMRRFRSRDRVGAIADFNRAIALQSNFVDAY 103
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG + G+S AI D + AL P + RG D A+ D A +
Sbjct: 104 NNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFARLNIGDRAGALADFQAASAI 163
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ G+ LS G+ + A ++ +AIQLD ++A+ + DL + AL
Sbjct: 164 KPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDAFYNRGIAKLDLGDFTGALA 223
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+V+ + ++KAY+ RG +G + A+ D +
Sbjct: 224 DFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFN 260
>gi|395531630|ref|XP_003767878.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1
[Sarcophilus harrisii]
Length = 860
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + Q + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 333 FEAATESFQRALILNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 412
>gi|427719490|ref|YP_007067484.1| hypothetical protein Cal7507_4274 [Calothrix sp. PCC 7507]
gi|427351926|gb|AFY34650.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 340
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 111/227 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AIS ++Q +K +P Y EA RG A ++ A I D+ AIQ
Sbjct: 92 NRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKLGDINAGIFDYDRAIQFQ 151
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG AR LG+ I D +A+E +P+ A H RG F + A D
Sbjct: 152 PNHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYARFSLGEKQEAYAD 211
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L N AY G S+GEY++A +AIQL ++ A+ + L
Sbjct: 212 CDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQLD 271
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
++E A+ Q + + + KAY RGL + LG + AI+D + +
Sbjct: 272 DNEGAISDYSQAISLHSNYPKAYFNRGLAKNELGDKQAAIEDFQTAA 318
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS VD ++ + G +AI ++++++ P A RG AR ++ AIS
Sbjct: 15 KSFVVDDYIAAANQKFQAGDIKAAIIDYEKVIQLQPDLTPAYNNRGLARFQLGDINGAIS 74
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AIQ P + A+ RG AR LG+ EAI D ++A++ EPN A+ + RG K
Sbjct: 75 DYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKL 134
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
D NA + D ++ + Y G A +G+ + +AI+L + A+ +
Sbjct: 135 GDINAGIFDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHN 194
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
L ++A + + + KAY+ RG + LG++++A D +
Sbjct: 195 RGYARFSLGEKQEAYADCDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQP 254
Query: 617 PHLIWNLTR 625
+ I R
Sbjct: 255 DYYIAYFNR 263
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F R + + +F +RG A+ G + I +D+ ++ P A RG AR
Sbjct: 142 FDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYARFS 201
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E + A +D AIQ PS +A+ RG + +LGE EA D +A++ +P+
Sbjct: 202 LGEKQEAYADCDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYF 261
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG ++ D A+ D S + L AY GLA + +G+ ++A ++ Q
Sbjct: 262 NRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNRGLAKNELGD----KQAAIEDFQTA 317
Query: 548 RNFLEAWGHLTQFYQDLAN 566
N + G++ + L+N
Sbjct: 318 ANLYQQQGNIEGYNTALSN 336
>gi|427730129|ref|YP_007076366.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427366048|gb|AFY48769.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 548
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 315 SASLNDSNTNSESYSKSSIS--DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
++SL S N E K +IS +N S + +L+ + L +E ++ V+
Sbjct: 218 NSSLLPSEPNQEQLLKPAISRPNNNHVSSYKQDEQLNLDYTKL---GDEYFSKGEYTVSI 274
Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
++++ ++ S RG+A G Y +AI+ + Q++K + +A RG A +
Sbjct: 275 NHYNQALKLNINDSELYYKRGLAYYQIGNYEAAIADYSQVIKINLHDAKAYHKRGLALSQ 334
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
EAAI D+TE+I+ NP A A+K R + R+ LG++ AI+D ++A++ P AD
Sbjct: 335 LGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRSYLGDNQGAIEDYTQAIKINPQYADTYK 394
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI + + ++L+ + +AY G A + IG+Y A E + +AIQ++
Sbjct: 395 NRGIARYIL----GTQPGFTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQIN 450
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+ + DL ++E A++ Q + ++ ++ AY+ RG + L AI D
Sbjct: 451 PYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIAD 510
Query: 608 LSSGS 612
+ +
Sbjct: 511 FQTAA 515
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G F Q ++ +P A RG ARA + AI D+T+AIQ N
Sbjct: 395 NRGIARYILGTQPG----FTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQIN 450
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR LG++ AI D ++A++ PN AD + RG + + K+ A+ D
Sbjct: 451 PYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIAD 510
Query: 506 LSACVKLDKE 515
+ ++
Sbjct: 511 FQTAADIYRQ 520
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
K D++ YT LG S GEY + + +A++L+ N E + Y + N E A
Sbjct: 248 KQDEQLNLDYTKLGDEYFSKGEYTVSINHYNQALKLNINDSELYYKRGLAYYQIGNYEAA 307
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ QV+ I+ +KAYH RGL L LG ++ AI D + R + PH
Sbjct: 308 IADYSQVIKINLHDAKAYHKRGLALSQLGAYEAAIDDYTESIR-LNPH 354
>gi|432946560|ref|XP_004083826.1| PREDICTED: tetratricopeptide repeat protein 13-like [Oryzias
latipes]
Length = 826
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+ DP A+ GRG A ++ Q + + A+ + I P
Sbjct: 120 IGNGLYDEAIKHFSLLLQNDPELVSAIYGRGIAYGKKSLQDIKNADLALYELNRVIALEP 179
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ AA+ED
Sbjct: 180 NWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDYVAAMEDF 238
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L K A Y GL G K+A E +A++L +F++A+ L Q Y++L +
Sbjct: 239 QRSLELKKNQPIAMLYKGLTYFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQAYRELGD 298
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A+E Q+ L +++ ++ LRG++L+ G ++A+ +
Sbjct: 299 FESAMESFQKALMMNQNHIQSLQLRGMMLYHHGSLQEALGNF 340
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F + L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYVAAMEDFQRSLELKKNQPIAMLYKGLTYFHRGMLKEAIETFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDFESAMESFQKALMMNQNHIQSLQLRGMMLYHHGSLQEALGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 279
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 114/211 (54%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I + +I+++ P EA RG A A + AI DF ++I+ NP+ EA++ RG
Sbjct: 41 YDQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ EAI+D KA++ +P A H +GI K ++ A+E+ ++ + +
Sbjct: 101 FVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQY 160
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G+A + +Y++A KAI+ + N++EA + Y+ NSEKA+E Q
Sbjct: 161 AEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQ 220
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
V+ ID + +AY RG + LG++KKAI+D
Sbjct: 221 VIQIDSDYLEAYIERGYVYGELGKYKKAIED 251
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y AI F++ +K +P Y EA GRG Q + E AI DF +AI+ P
Sbjct: 65 RGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKP 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ +G A LG +A+++ KA++ P A+ + RGI + + + A+ D
Sbjct: 125 KYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGRGIAYIQMEKYRQALNDF 184
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K + A G+A G +KA EA + IQ+D ++LEA+ Y +L
Sbjct: 185 DKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQIDSDYLEAYIERGYVYGELGK 244
Query: 567 SEKALE 572
+KA+E
Sbjct: 245 YKKAIE 250
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + KY AI F++ +K P Y +A G+G A E A+ +F +AIQ+N
Sbjct: 98 GRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNN 157
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + + +A+ D KA++F N + ++ +GI + + A+E
Sbjct: 158 PQYAEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEA 217
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+ +++D + AY G +G+YKKA E KA + EA+ + +F
Sbjct: 218 FTQVIQIDSDYLEAYIERGYVYGELGKYKKAIEDCEKARNKNSKSQEAYLCIAKF 272
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++K+I+ L+ ++Y R F Y + E ++ I+D +KA+++ P QA+
Sbjct: 78 AIQDFNKSIK-LNPNYYEAYR-----GRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFH 131
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G A++ LG E+AL + K
Sbjct: 132 GQGIAYTKLGNYEKALENFRK 152
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 15 KTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEI 69
K + I + ++ +++ A A + I KL +L N+ KAI+ + A+++
Sbjct: 108 KYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQ-NNPQYAEAFN- 165
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
R Y Q+E ++ + D DKA++ + ++A KG A+ G E+A+ +
Sbjct: 166 ----GRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAF 218
>gi|333996917|ref|YP_004529529.1| hypothetical protein TREPR_3648 [Treponema primitia ZAS-2]
gi|333741255|gb|AEF86745.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 450
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 8/264 (3%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKE 410
L +N K + + + +I D+ L+RG A +GK AI+ + ++
Sbjct: 120 FLHGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRS 179
Query: 411 DPMYPEALIGRGTA---RAFQRELE--AAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
DP+ +A I RG A +AF ++ + AI DFT AI +P+ +A+ RG A G+
Sbjct: 180 DPINTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDY 239
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D +A+ N A RG ++K D + A++D + + +D + AYTY G
Sbjct: 240 DRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGD 299
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A S EY+KA E + +AI ++ + + A+ + Y + +A+E QV+ I+ +
Sbjct: 300 AYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDA 359
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLS 609
AY+ RG++ + G + +AI+D +
Sbjct: 360 VAYNSRGIIYYKNGDYDQAIEDYT 383
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 8/225 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD RG A +G Y AI+ FDQ ++ + Y A I RG + + + + AI DFT
Sbjct: 222 NVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFT 281
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI +P+ +A+ RG A + E +AI+D ++A+ P+ + RG + +K D+
Sbjct: 282 MAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDY 341
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N A+ED + + ++ ++ AY G+ G+Y +A E + +AI + ++ EA +L
Sbjct: 342 NRAIEDYTQVIGINPDDAVAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAEANLNLAM 401
Query: 560 F-------YQDLANSEKALECLQQVLYIDKRFSKA-YHLRGLLLH 596
Y + E+AL+ Q + +D + A Y+ LL+H
Sbjct: 402 AHNSRGIKYTKCHDYEQALDDFNQAISVDPNYYDARYNFENLLIH 446
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 39/263 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA---- 441
+RG++ +G+Y SAI+ + Q +K DP +L RG + A +DFT+A
Sbjct: 19 NRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARADFTQANNID 78
Query: 442 ------------------------------IQSNPSAGEAWKRRGQARAALGESVEAIQD 471
I NP+ A+ G A + GE AI+D
Sbjct: 79 PNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKGEYHHAIRD 138
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + +P+ RG + A+ D + ++ D N AY + GLA
Sbjct: 139 YTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHRGLAYEVKA 198
Query: 532 EYKKAE-----EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
KK++ E AI +D N ++A+ H Y + ++A+ Q + I+ ++
Sbjct: 199 FIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAI 258
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY RG + G AIKD +
Sbjct: 259 AYINRGNSHYKKGDDDLAIKDFT 281
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P EA RG + + E ++AI+D+T+AI+ +P + RG+ +G S +A D
Sbjct: 11 PDTAEAFKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARAD 70
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A +PN A +L + + +++ A + + L+ + +AY GLA S G
Sbjct: 71 FTQANNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKG 130
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFY-----QDLANSEKALECLQQVLYIDKRFSK 586
EY A + I +D ++ +A+ + Q Y DLA ++ L + D +
Sbjct: 131 EYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHR 190
Query: 587 --AYHLRGLLLHGLGQHKKAIKDLS 609
AY ++ + +H +AI+D +
Sbjct: 191 GLAYEVKAFIKK--SKHGQAIEDFT 213
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%)
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL P++A+ RG+ K ++++A+ D + +KLD + + + G +
Sbjct: 2 DLKAVDSSSPDTAEAFKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKM 61
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G +A +A +D N + + Y N + A + ++ + AY L
Sbjct: 62 GNSDQARADFTQANNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFL 121
Query: 591 RGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
GL G G++ AI+D ++ + L R + C+
Sbjct: 122 HGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCY 162
>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 818
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 114/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A +G Y AI + Q ++ D + A RG A + E AI DF++AI+ N
Sbjct: 98 GRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELN 157
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A G EAI+D S+A+E + H RGI FK + A++D
Sbjct: 158 DKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKD 217
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD + AY G+A G Y++A + + KAI+LD F A+ Y +
Sbjct: 218 YSQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKG 277
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A++ + + +D +F+ AYH RG G +++AIKD S
Sbjct: 278 SYEEAIKDYSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIKDYS 321
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 116/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y AI + + ++ D + A GRG A + E AI D+++AI+ +
Sbjct: 30 NRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELD 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A + G +AI+D S+A+E + A ++RG + + A++D
Sbjct: 90 DKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKD 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++L+ + AY G+A G YK+A + + +AI+LD F+ A+ Y
Sbjct: 150 FSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKG 209
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A++ Q + +D +F AYH RG+ G +++AIKD S
Sbjct: 210 SYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYS 253
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 5/255 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D + + RG A +G Y AI F + ++ + Y A RG A +
Sbjct: 117 SQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGS 176
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+++AI+ + A+ RG A G EAI+D S+A+E + H RG
Sbjct: 177 YKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDGKFVHAYHGRG 236
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I FK + A++D S ++LD + AY G A G Y++A + + KAI+LD F
Sbjct: 237 IAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGSYEEAIKDYSKAIELDGKF 296
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + Y + + E+A++ Q + +D ++ Y+ RG+ + +G +K+ D ++
Sbjct: 297 AHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNT 356
Query: 611 GSRTMMPHLIWNLTR 625
++ + + NL R
Sbjct: 357 VLYLILSNELINLIR 371
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG +G EAI+D SKA+E + H RGI FK + A++D S +
Sbjct: 27 AYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAI 86
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD + AY G A S G YKKA + + +AI+LD F A+ Y + + E+A
Sbjct: 87 ELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEA 146
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ + + ++ +++ AYH RG+ G +K+AIKD S
Sbjct: 147 IKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYS 185
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG E AI D+++AI+ + A+ RG A G EAI+D S+A+
Sbjct: 27 AYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAI 86
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + A H RG K + A++D S ++LD + AY G A G Y++A
Sbjct: 87 ELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEA 146
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+L+ + A+ Y + + ++A++ Q + +D +F AYH RG+
Sbjct: 147 IKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYF 206
Query: 597 GLGQHKKAIKDLS 609
G +++AIKD S
Sbjct: 207 KKGSYEEAIKDYS 219
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS + +++ AY G+ +G Y++A + + KAI+LD F+ A+ Y
Sbjct: 14 LSNVPEPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKG 73
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A++ Q + +D +++ AYH RG G +KKAIKD S
Sbjct: 74 SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYS 117
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++S+AI LD +Y R Y + L++ I+D KA++LD AY
Sbjct: 214 AIKDYSQAIE-LDGKFVHAYH-----GRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYY 267
Query: 108 LKGCAFSALGRKEEALSVWEKGYE------HALH 135
+G A+ G EEA+ + K E HA H
Sbjct: 268 DRGNAYCEKGSYEEAIKDYSKAIELDGKFAHAYH 301
>gi|403338793|gb|EJY68640.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 979
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A +G Y AI + + L+ P + +AL RG A E + AI D+++AI +
Sbjct: 551 SQGYAARKKGDYQQAIDFYSKALQIMPNHFKALFNRGFAYDKVGEFDLAIQDYSQAISID 610
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + +G + G+ EAI+ SKA++ EP AD H RG K +DF +A++D
Sbjct: 611 PNNAFTYYNKGISLDRKGDFDEAIKSFSKAIDLEPGKADFYHNRGFAFRKKRDFMSAIKD 670
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++D ++ A+ I + +AE+ +L AI++ + A HL + +
Sbjct: 671 YSTAIQIDNQHFKAFYNRAFCWDKIAKLDEAEKDYLHAIKMQPQNISALHHLGTIREKMG 730
Query: 566 NS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
ALE +VL +DK ++ +Y+ RGL+ ++AI D +
Sbjct: 731 GDRLNLALENFNEVLELDKNYAPSYNGRGLVWDRFFNFEEAINDFT 776
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+ F+++L+ D Y + GRG R F E AI+DFT+AI + W R
Sbjct: 737 ALENFNEVLELDKNYAPSYNGRGLVWDRFF--NFEEAINDFTKAIDLDSQNAVYWHNRAC 794
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+G+ ++I+D KA+E + ++ I RG+VN K + F ++ED S +K N
Sbjct: 795 CFRNMGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIKYGPANN 854
Query: 518 -SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ + +G+Y +A + + IQLD + A + Y+ L+ ++A++ +
Sbjct: 855 IKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAIKDFTR 914
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
V+ ID + AY RG +G+ AI D S
Sbjct: 915 VIEIDPDNANAYFNRGCCYDSVGELDLAISDYS 947
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG-EA 451
N G+ +I FD+ ++ D RG E +I D++ I+ P+ +A
Sbjct: 798 NMGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIKYGPANNIKA 857
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R A LG+ EAI+D S+ ++ + + LH RGI + + A++D + ++
Sbjct: 858 FNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAIKDFTRVIE 917
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+D +N +AY G S+GE A + A++LD
Sbjct: 918 IDPDNANAYFNRGCCYDSVGELDLAISDYSVALELD 953
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 49 LRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L +S+AIR ++ E I + NR Y +L +K I+D + +++DP AY
Sbjct: 868 LGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYF 927
Query: 108 LKGCAFSALGRKEEALSVW 126
+GC + ++G + A+S +
Sbjct: 928 NRGCCYDSVGELDLAISDY 946
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE KY A +I +A R A + AI D++ IQ + A
Sbjct: 845 NEIKYGPANNI------------KAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHAL 892
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG + L + EAI+D ++ +E +P++A+ RG + + A+ D S ++L
Sbjct: 893 HNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYFNRGCCYDSVGELDLAISDYSVALEL 952
Query: 513 DKEN 516
D N
Sbjct: 953 DMRN 956
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
+ + K+I + D+ + +DS + + R + + S+ ++S I+ +
Sbjct: 799 MGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIK-----YGPAN 853
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
I+ NRA+CY++L + IRD + +QLD + A +G ++ L + +EA+
Sbjct: 854 NIKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAI 909
>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 605
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 120/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + Y A++ ++ ++ +P Y A RG +E + A++D+ +AI+ N
Sbjct: 322 NRGIVYLYLKDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEIN 381
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +AI D +K +E P A+ ++RG V + KD+ A++D
Sbjct: 382 PQLFQAYDNRGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKD 441
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ +N +Y G + EY KA + + KAI+++ A+ + Y +L
Sbjct: 442 YNKAIEINPQNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLK 501
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KA++ + L I+ +++ AY+ RG + L ++ KAIKD +
Sbjct: 502 EYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYN 545
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 123/241 (51%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V + S+ S + + +G N +Y AI+ + + ++ +P Y EA RG +
Sbjct: 271 TVAQSSQPNSTTAETYFKQGEDYRNNNQYDKAIAAYTKAIEINPQYAEAYKNRGIVYLYL 330
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A++D +AI+ NP A+ RG L E +A+ D +KA+E P
Sbjct: 331 KDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDN 390
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + K+++ A+ D + ++++ ++ AY G + +Y+KA + + KAI+++
Sbjct: 391 RGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINP 450
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ FY L +KA++ + + I+ + + AY+ RG + H L ++ KAIKD
Sbjct: 451 QNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDY 510
Query: 609 S 609
+
Sbjct: 511 N 511
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 132/239 (55%), Gaps = 5/239 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I ++ + S RG +Y A++ +++ ++ +P +A RG+ +E
Sbjct: 341 NKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDNRGSFYYNLKE 400
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ + I+ NP EA+ +RG L + +AI+D +KA+E P +AD + RG
Sbjct: 401 YDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINPQNADSYYLRG 460
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K+++ A++D + ++++ +N AY G ++ EY KA + + KA++++ +
Sbjct: 461 SFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALEINPQY 520
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ Y L +KA++ + + I+ +++ AY+ RG++ L ++KAIKD +
Sbjct: 521 ADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYN 579
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I ++ +L +RG N +Y AI+ ++++++ +P EA RG ++
Sbjct: 375 NKAIEINPQLFQAYDNRGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKD 434
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI D+ +AI+ NP +++ RG L E +AI+D +KA+E P +A + RG
Sbjct: 435 YEKAIKDYNKAIEINPQNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRG 494
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V K+++ A++D + ++++ + AY G + EY KA + + KAI+++ +
Sbjct: 495 YVYHNLKEYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQY 554
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+A+ + Y+ L + EKA++ + L I+ + A
Sbjct: 555 ADAYNNRGVVYEILKDYEKAIKDYNKALEINPQHPYA 591
>gi|414078950|ref|YP_006998268.1| TPR repeat-containing serine protease [Anabaena sp. 90]
gi|413972366|gb|AFW96455.1| TPR repeat-containing serine protease [Anabaena sp. 90]
Length = 613
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI ++Q LK +P Y EA I RG AR+ + + AI D+ +A++ N
Sbjct: 362 NRGGVRSELGDKQGAIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKIN 421
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR G+ AI D ++A++ PN + RG+ D AA++D
Sbjct: 422 PNYAYAYINRGLARYDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQD 481
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G S++G+ + A + + +AI+++ N+ A+ + L
Sbjct: 482 YNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIKINPNYALAYNNRGNARSALG 541
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+ Q + I+ + ++ Y+ RG LG + AI DL
Sbjct: 542 DKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGAISDL 584
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 1/228 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF + +G+ + N+G AI +++ ++ +P + EA RG R+ + + AI+DF +A
Sbjct: 257 DFFI-QGVDKQNKGDNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQA 315
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP+ A+ RG R+ LG+ AIQD ++AL+ PN A + RG V + D
Sbjct: 316 LNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQG 375
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + +K++ AY GLA S G+ + A + + +A++++ N+ A+ +
Sbjct: 376 AIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLAR 435
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D + + A+ Q + I+ AY+ RGL LG + AI+D +
Sbjct: 436 YDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYN 483
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 118/224 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G +AI ++Q LK +P A RG R+ + + AI D+ +A++ N
Sbjct: 328 NRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKIN 387
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR+ G+ AIQD ++AL+ PN A RG+ + D A+ D
Sbjct: 388 PNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIAD 447
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY GLA S++G+ + A + + +AI+++ N +A+ + L
Sbjct: 448 FNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALG 507
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ Q + I+ ++ AY+ RG LG + AI D +
Sbjct: 508 DKQAAIQDYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFN 551
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A+ + G AI ++Q LK +P Y A I RG AR + + AI+DF +AI+
Sbjct: 395 INRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQAIKI 454
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR+ LG+ AIQD ++A++ PN A + RG D AA++
Sbjct: 455 NPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQ 514
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ AY G A S++G+ + A +AI ++ E + + L
Sbjct: 515 DYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLAL 574
Query: 565 ANSEKALECLQQ 576
+ + A+ LQQ
Sbjct: 575 GDKQGAISDLQQ 586
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G AI+ F+Q L +P A RG R+ + +AAI D+ +A++ N
Sbjct: 294 NRGGIRSNLGDKQGAIADFNQALNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKIN 353
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R+ LG+ AIQD ++AL+ PN A+ RG+ D A++D
Sbjct: 354 PNDALAYYNRGGVRSELGDKQGAIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQD 413
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY GLA G+ + A +AI+++ N A+ + +L
Sbjct: 414 YNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLG 473
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ Q + I+ ++AY+ RG LG + AI+D +
Sbjct: 474 DKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYN 517
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G +AI ++Q +K +P +A RG R+ + +AAI D+ +AI+ N
Sbjct: 464 NRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIKIN 523
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ALG+ AI D ++A+ P A+ + RG D A+ D
Sbjct: 524 PNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGAISD 583
Query: 506 LSACVKL 512
L L
Sbjct: 584 LQQAANL 590
>gi|428305620|ref|YP_007142445.1| hypothetical protein Cri9333_2057 [Crinalium epipsammum PCC 9333]
gi|428247155|gb|AFZ12935.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 343
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 4/230 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G + AI+ + ++ DP Y I RG A A Q + A++D+T A+ +
Sbjct: 93 NRGLARRQLGDFTGAIADYTNSIRIDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLD 152
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A ALG+ AI+D ++ + +P RGI D+ +A+ D
Sbjct: 153 AKDAAAYFNRAIAYDALGDRAAAIKDYTQTISLQPKYITAYLNRGISRTDSGDYKSAIAD 212
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ +KLD + + Y G+A +G+ K A + +AIQL N A+ + L + Q
Sbjct: 213 FNTVLKLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQLSPNNASAYYNRGLVSYRQ- 271
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
N + A++ Q + +D RF++AY RGLL + LG + A+ D+ + +R
Sbjct: 272 -GNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALDDVRTAAR 320
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGIA +GKY A++ + + D A R A + AAI D+T+ I
Sbjct: 126 INRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAIKDYTQTISL 185
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG +R G+ AI D + L+ +P RGI D A+
Sbjct: 186 QPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGDLKGAIA 245
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L N SAY GL G + A + + +AI++D F A+G+ +L
Sbjct: 246 DYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYEL 305
Query: 565 ANSEKALE 572
+ E AL+
Sbjct: 306 GSREAALD 313
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
Q+ K D L RG ++ + AI+D T AI+ + + EA+ RG AR LG+
Sbjct: 51 QVTKTD------LFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDF 104
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D + ++ +P+ RGI + A+ D +A V LD ++ +AY +
Sbjct: 105 TGAIADYTNSIRIDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAI 164
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A ++G+ A + + + I L ++ A+ + D + + A+ VL +D +
Sbjct: 165 AYDALGDRAAAIKDYTQTISLQPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLV 224
Query: 586 KAYHLRGLLLHGLGQHKKAIKD 607
Y RG+ LG K AI D
Sbjct: 225 AGYENRGIARRFLGDLKGAIAD 246
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI++ + G Y SAI+ F+ +LK DP RG AR F +L+ AI+D+ AIQ
Sbjct: 194 LNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQL 253
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG G AI D ++A+ + A RG++ ++ AA++
Sbjct: 254 SPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALD 313
Query: 505 DLSACVKL 512
D+ +L
Sbjct: 314 DVRTAARL 321
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG+ + D+N A+ DL+A ++LD AY GLA +G++ A + +I+
Sbjct: 57 LFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDFTGAIADYTNSIR 116
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D +++ + + Y +A+ + +D + + AY R + LG AI
Sbjct: 117 IDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAI 176
Query: 606 KDLSSGSRTMMPHLI 620
KD + + ++ P I
Sbjct: 177 KDYTQ-TISLQPKYI 190
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ + + AIR LDS LA++Y NR QL I D ++++DP+ + YI
Sbjct: 73 AIADLTAAIR-LDSTLAEAY-----YNRGLARRQLGDFTGAIADYTNSIRIDPSYISPYI 126
Query: 108 LKGCAFSALGRKEEALSVW 126
+G A++A G+ EA++ +
Sbjct: 127 NRGIAYAAQGKYTEAMADY 145
>gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana)
tropicalis]
Length = 839
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 121/229 (52%), Gaps = 6/229 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ G + G AI F +L+E+P A+ GRG A A + + E A+ + +
Sbjct: 127 LAIGYVLIGSGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDIKNAELALFELS 186
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DL++A++ +P SA + RG ++F +D+
Sbjct: 187 RVISLEPDHPEVFEQRAEILSPLGRISEALSDLTRAIQLQP-SARLYRHRGTLHFISEDY 245
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA ED + L++ A Y GL G K+A ++ +A++ NF+EA+ L Q
Sbjct: 246 LAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQ 305
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y++L N E A+E Q+ L +++ + LRG++L+ G ++A+ +
Sbjct: 306 AYRELGNFEAAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNF 354
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A F + L + P A++ +G + L+ AI F EA++
Sbjct: 235 RGTLHFISEDYLAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKS 294
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+K GQA LG A+++ KAL N L RG++ + A+ +
Sbjct: 295 NFIEAYKSLGQAYRELGNFEAAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNF 354
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ S+G + + +A K +
Sbjct: 355 KRCLQLEPYNEVCQYMKGLSHVSMGHFYEGIKAQTKVM 392
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++++ I+V L +G+ + G AI F + LK+ + EA G A E
Sbjct: 258 LNQNQPIAV---LYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQAYRELGNFE 314
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AA+ +F +A+ N + + + RG G EA+ + + L+ EP + + +G+
Sbjct: 315 AAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNEVCQYMKGLS 374
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ F ++ + + D + L + + EY + AHL
Sbjct: 375 HVSMGHFYEGIKAQTKVMLNDPLPGQKASQEYLKVKYLREYSRYLHAHL 423
>gi|351708630|gb|EHB11549.1| Tetratricopeptide repeat protein 13 [Heterocephalus glaber]
Length = 845
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 127 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 186
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG ++F
Sbjct: 187 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHF 245
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L++ +A Y GL G K+A E+ +A++ +F++A+
Sbjct: 246 ISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 305
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G +A+K+
Sbjct: 306 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNF 359
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 220 AVNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFF 279
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 280 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 339
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 340 QLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 397
>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
Length = 608
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 3/259 (1%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+D +A N T+I+ + ++ +RG+A+ N G Y AI+ F Q L+
Sbjct: 121 KYDQAIANYQQAIENSPELATQINCDIAKALH---NRGVARCNYGDYQGAIADFQQALQW 177
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P + A RG E + AI++ A+Q +P+ E + RG AR ALG++ AI+
Sbjct: 178 HPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQGAIK 237
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D + AL+ +P+ A+ + RG+V + KDF A+ D + + L+ ++ AY+ GL ++
Sbjct: 238 DYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETL 297
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEY +A E + +A+Q + +G + L + + A++ Q L + ++ Y
Sbjct: 298 GEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCD 357
Query: 591 RGLLLHGLGQHKKAIKDLS 609
R G ++ A++D +
Sbjct: 358 RATTRRIQGDYQGAVQDYT 376
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 8/223 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ FDQ L+ +P + EA R AR F + E AI+DF +AI+ P+ +++ RG
Sbjct: 54 YHGAIANFDQALEINPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRG 113
Query: 457 QARAALGESVEAIQDLSKALEFEPNSA-----DI---LHERGIVNFKFKDFNAAVEDLSA 508
A AL + +AI + +A+E P A DI LH RG+ + D+ A+ D
Sbjct: 114 NAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQ 173
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ AY+ G +GEY++A H +A+QLD N E + + L +++
Sbjct: 174 ALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQ 233
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A++ L I F++AY+ RGL+ L +AI D +
Sbjct: 234 GAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQA 276
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 9/242 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYP--------EALIGRGTARAFQRELEAAISD 437
SRG A + KY AI+ + Q ++ P +AL RG AR + + AI+D
Sbjct: 111 SRGNAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIAD 170
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+Q +P A+ RG LGE +AI + +AL+ +PN A++ H RG +
Sbjct: 171 FQQALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALG 230
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A++D + +K+ AY GL S + ++ +A +A+ L+ + ++A+
Sbjct: 231 DNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSER 290
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
+ L +ALE Q L + + Y LR + LG ++ AI D S+ S + P
Sbjct: 291 GLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDD-SNQSLKLHP 349
Query: 618 HL 619
HL
Sbjct: 350 HL 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 129/295 (43%), Gaps = 23/295 (7%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISD 437
++ D +G + +G Y AI+ + Q ++ P Y EA G + + ++ AI++
Sbjct: 1 MNADEFFQQGFNKHLQGDYQEAIANYTQAIQLYPDYAEAYYNLGIILSAELQDYHGAIAN 60
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A++ NP EA+ R AR LG+ AI D +A+E +PN H RG +
Sbjct: 61 FDQALEINPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRGNAYLALE 120
Query: 498 DFNAAVEDLSACVKLDKENKS--------AYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ A+ + ++ E + A G+A + G+Y+ A +A+Q
Sbjct: 121 KYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQALQWHPY 180
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F A+ YQ L ++A+ + L +D ++ YH RG + LG ++ AIKD +
Sbjct: 181 FAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQGAIKDYN 240
Query: 610 SGSRTMMPHLIWNLTRWRNLCFNAWPFIRRRLLCTRLLKSTVSFAGLTLMEILIP 664
+ + PH A + R L+ +RL + A IL P
Sbjct: 241 YALK-IKPHF-------------AEAYYNRGLVYSRLKDFPQAIADFNQALILNP 281
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI ++ LK P + EA RG + ++ AI+DF +A+ N
Sbjct: 221 NRGNARYALGDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILN 280
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG R LGE +A++D S+AL+ P A + R V D+ A++D
Sbjct: 281 PDDVQAYSERGLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDD 340
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL Y G+Y+ A + + A+Q++ N EA+ Y+ L
Sbjct: 341 SNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQ 400
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ A+ Q + + FS AY RG L K+A+ D + + + P L+
Sbjct: 401 DFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQ-ALAINPDLV 454
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y A+ + L+ + EA GR A F ++ AA++D T+AIQ P A+
Sbjct: 365 QGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYC 424
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A L +A+ D ++AL P+ + + R + + KD+ +AV D + ++ +
Sbjct: 425 NRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRN 484
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ + Y+ A ++ +Y A + +A+ +D + E W + + L + AL
Sbjct: 485 PQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGRSLSMLGDLTAALAD 544
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q L ++ AY LR + L ++ AI D
Sbjct: 545 LNQALQCQPYWASAYMLRADIRRQLEDYQGAIADF 579
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + AI+ F+Q L +P +A RG R E A+ D+++A+Q N
Sbjct: 255 NRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETLGEYYQALEDYSQALQKN 314
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R R LG+ AI D +++L+ P+ A +R D+ AV+D
Sbjct: 315 PTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQD 374
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A + ++ A + +AIQ+ +F A+ + ++ L
Sbjct: 375 YTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLR 434
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N ++A+ Q L I+ +AY+ R L + L ++ A+ D +
Sbjct: 435 NEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYT 478
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
R IA +A+A++ Q ++ P + A RG A F R + A++D+ +A+ N
Sbjct: 391 GRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAIN 450
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R R L + A+ D ++AL+ P SA +R + +D++ A+ D
Sbjct: 451 PDLVEAYYNRACLRYTLKDYQSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIAD 510
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------EEAHLKAIQLDRNFL 551
+ +D + G +LS +G+ A A++ + R
Sbjct: 511 YHQALAIDSSRAEDWYNRGRSLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLE 570
Query: 552 EAWGHLTQFYQ--DLANSEKALECLQQVL 578
+ G + F + D+ N + +E QQ+L
Sbjct: 571 DYQGAIADFQKSADIYNRDGNIEYYQQIL 599
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 119/304 (39%), Gaps = 47/304 (15%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAI 401
+K EA N+ +R+ DF + RG+ + G+Y A+
Sbjct: 245 IKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETLGEYYQAL 304
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ Q L+++P R R + + AI D ++++ +P + + R R
Sbjct: 305 EDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCDRATTRRI 364
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G+ A+QD + AL+ N A+ + R I +DF AAV D + +++ + AY
Sbjct: 365 QGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYC 424
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--------------------------- 554
G A + K+A + +A+ ++ + +EA+
Sbjct: 425 NRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRN 484
Query: 555 GHLTQFYQDLANSEKALE-------CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
FY D AN+ AL+ Q L ID ++ ++ RG L LG A+ D
Sbjct: 485 PQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGRSLSMLGDLTAALAD 544
Query: 608 LSSG 611
L+
Sbjct: 545 LNQA 548
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ N+ +A+ I + A++Y CNRA L ++ I D D+A+++ P Q+Y
Sbjct: 57 AIANFDQALEI-NPQFAEAY-----CNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYH 110
Query: 108 LKGCAFSALGRKEEALSVWEKGYEH 132
+G A+ AL + ++A++ +++ E+
Sbjct: 111 SRGNAYLALEKYDQAIANYQQAIEN 135
>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 1276
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ GKY A+S FD+ L+ +P Y EAL RG + A+ F +A++ NP
Sbjct: 92 RGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLGKLERYQEALPTFDKALELNP 151
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA RG A L EA Q KALE PN+A + RG+ K + + A+
Sbjct: 152 NYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTF 211
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ N + G+AL ++ Y++A +++ KA++L+ N+ EAW + + L
Sbjct: 212 DKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLER 271
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ALE + ++ +++++ RG+ L L ++++A +
Sbjct: 272 YQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQ 311
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A+ FD+ L+ +P Y EAL RG A + A + +A++ N
Sbjct: 125 NRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELN 184
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG A L EA+ KALE PN+A++ RG+ + + A++
Sbjct: 185 PNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQS 244
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ A+ Y G+AL S+ Y++A EA KA +L+ N E+W + + L
Sbjct: 245 YEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLE 304
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A + Q + ++ ++A++ RG L L ++++A +
Sbjct: 305 RYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSF 347
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 115/220 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N +Y A +DQ +K +P Y EA +G A E A + +AI+ NP
Sbjct: 364 RGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNP 423
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW RG A L EA Q KA++ PN A+ + +G+ K + + A++
Sbjct: 424 NHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSY 483
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL+ A+ G+AL + Y++A +++ +AI+L+ N+ EAW + +L
Sbjct: 484 DQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLEC 543
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A + + + ++ ++A++ RG L L ++++A++
Sbjct: 544 YQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQ 583
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 115/224 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A VN +Y A+ +++ LK +P Y EA RG A + A+ F +A +
Sbjct: 226 FNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKAREL 285
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ E+W RG A L EA Q +A++ N A + RG K + + A +
Sbjct: 286 NPNNAESWNNRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQ 345
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+KL+ A+ Y GLAL ++ Y++A +++ +AI+L+ N+ EAW + L
Sbjct: 346 SFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGML 405
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+A + Q + ++ ++A++ RG+ L L ++++A +
Sbjct: 406 ERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSF 449
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +Y A+ FD+ L+ +P E RG A + A+ + +A++ NP
Sbjct: 194 RGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNP 253
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ GEAW RG A +L EA++ KA E PN+A+ + RG+ K + + A +
Sbjct: 254 NYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSY 313
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + A+ G L + Y++A ++ +AI+L+ N+ EAW + +L
Sbjct: 314 DQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLER 373
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A + Q + ++ +++A++ +G+ L L ++++A +
Sbjct: 374 YEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQ 413
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 116/220 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N +Y A FD+ +K +P + EA +G A + A+ + +AI+ N
Sbjct: 431 NRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLN 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA+Q +A++ PN A+ + RG + + A +
Sbjct: 491 PNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQS 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + A+ G +L ++ Y++A +++ KAIQL+ N+ EA + + L
Sbjct: 551 FDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLE 610
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A + + + ++ ++A++ RG++L L +H++AI
Sbjct: 611 RYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLERHQEAI 650
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A FDQ +K +P Y EA RG A E A + +AI+ N
Sbjct: 329 NRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLN 388
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA Q +A++ PN A + RG+ + + A +
Sbjct: 389 PNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQS 448
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + A+ G+AL + Y++A +++ +AI+L+ N+ EAW + L
Sbjct: 449 FDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLE 508
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL+ Q + ++ +++A++ RG L L +++A +
Sbjct: 509 RYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSF 551
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 115/223 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +Y A +DQ +K +P + +A RG A E A F +AI+ N
Sbjct: 397 NQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLN 456
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA+Q +A++ PN A+ + +G+ K + + A++
Sbjct: 457 PNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQS 516
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ A+ G AL ++ Y++A ++ KAIQL+ N EAW + ++L
Sbjct: 517 YDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLE 576
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL+ + + ++ +++A RG+ L L ++++A +
Sbjct: 577 RYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSF 619
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G+ N GK+ A+ F++ L+ + A RG A + E A+S F +A++ N
Sbjct: 57 GQGVVLFNLGKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELN 116
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA RG L EA+ KALE PN A+ L RG+ + + + A +
Sbjct: 117 PNYAEALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQS 176
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ N A+ Y G+AL + Y++A KA++L+ N E W + +L
Sbjct: 177 YDKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLE 236
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
++AL+ ++ L ++ + +A++ RG+ L L ++++A++ +R + P+ N
Sbjct: 237 RYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDK-ARELNPN---NAES 292
Query: 626 WRN 628
W N
Sbjct: 293 WNN 295
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +Y A+ +DQ +K +P Y EA +G A + A+ + +AI+ N
Sbjct: 465 NQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLN 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L EA Q KA++ PN A+ + RG + + A++
Sbjct: 525 PNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQS 584
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ A G+AL + Y++A ++ KAIQL+ N EAW + L
Sbjct: 585 YDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLE 644
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--GQHKKAIKDLS 609
++A+ Q L I + F A+ RG L++ L G K I L+
Sbjct: 645 RHQEAIASYDQALVIKRDFYLAWINRGNLIYSLSSGNFLKIISPLA 690
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +Y A +DQ ++ + +A RG E A F +AI+ N
Sbjct: 295 NRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLN 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L EA Q +A++ PN A+ + +G+ + + A +
Sbjct: 355 PNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQF 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + A+ G+AL ++ Y++A ++ KAI+L+ N EAW + L
Sbjct: 415 YDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLE 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++AL+ Q + ++ +++A++ +G+ L L ++++A++
Sbjct: 475 RYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQ 515
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 479 EPNSADI--LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EP + +I L +G +F +++ AA++ L + L+ A+ G+ L ++G++++A
Sbjct: 12 EPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEA 71
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ KA++L+ N AW + L E+AL + L ++ +++A RG +L
Sbjct: 72 LQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLG 131
Query: 597 GLGQHKKAI 605
L ++++A+
Sbjct: 132 KLERYQEAL 140
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
+ L K + + ++ + ++S A+A R L L + +A+ D L +
Sbjct: 63 FNLGKHQEALQSFNKALELNSNEANAWNYRG--VALLHLGKYEEALSTFDKALELNPNYA 120
Query: 71 D-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+ + NR F +LE ++ + DKAL+L+P +A +G A L R +EA ++K
Sbjct: 121 EALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKA 180
Query: 130 YE 131
E
Sbjct: 181 LE 182
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD- 71
L K + + D+ + ++ A A++ R + L L + +A+ D L + +
Sbjct: 99 LGKYEEALSTFDKALELNPNYAEALSNRGFV--LGKLERYQEALPTFDKALELNPNYAEA 156
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ NR +LE ++ + DKAL+L+P A+ +G A L R +EAL ++K E
Sbjct: 157 LFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALE 216
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
+L + + + D+ ++++ A A + + L KL +L+++ +AI+ L+ A++
Sbjct: 472 KLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIK-LNPNYAEA 530
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ NR F LE ++ + DKA+QL+P +A+ +G + L R +EAL +
Sbjct: 531 W-----YNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSY 585
Query: 127 EKG 129
+K
Sbjct: 586 DKA 588
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD-SLLAQSYEIQ 70
+L + + + D+ ++++ A A R L +L + +A + D ++ + +
Sbjct: 506 KLERYQEALQSYDQAIKLNPNYAEAWYNRG--FALGNLECYQEAFQSFDKAIQLNPNDAE 563
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR F LE ++ ++ DKA+QL+P +A +G A L R EEA ++K
Sbjct: 564 AWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKA 622
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL + + D+ + ++ A A R L L + +A+ D L + +
Sbjct: 166 RLERYQEAFQSYDKALELNPNNAVAWNYRG--VALGKLERYQEALPTFDKALELNPNNAE 223
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ NR LE ++ ++ +KAL+L+P +A+ +G A +L R +EAL ++K
Sbjct: 224 VWFNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKAR 283
Query: 131 E 131
E
Sbjct: 284 E 284
>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 471
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 3/257 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDP 412
K TS + +KK + +++ + D L+ RG + N G AI+ F++ ++ P
Sbjct: 15 KPTSQDDLGDKKGAIADYNRAIELQPDDALAYYNRGNVRYNLGDKKGAIADFNKAIELQP 74
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG R+ + + AI+D +AI+ P A+ RG R+ LG+ AI D
Sbjct: 75 DLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADY 134
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E +P+ A + RG+V + D A+ D + ++L + AY GL S +G+
Sbjct: 135 NKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGD 194
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
K A + KAI+L ++ +A+G+ +L + + A+ L +V+ + ++AY+ RG
Sbjct: 195 KKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRG 254
Query: 593 LLLHGLGQHKKAIKDLS 609
L LG K AI D +
Sbjct: 255 LFRSELGDKKGAIADFN 271
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 4/271 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D L+ RG+ + G AI+ +++ ++ P Y +A R
Sbjct: 160 DKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNR 219
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
GT R+ + + AI+D + I+ P +A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 220 GTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPD 279
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A ++RG V + D A+ D + ++L ++ AY G +G+ K A +
Sbjct: 280 DAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAIADYN 339
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L + +A+ + +L + + + +V+ + ++ AY RGL+ + LG
Sbjct: 340 KAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDK 399
Query: 602 KKAIKDLSSGSRTMMPHLIWNLTRWRNLCFN 632
K AI DL+ + + P + N+ +N
Sbjct: 400 KGAIADLNK-AIELQPDYAFAYGNRGNVRYN 429
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 129/253 (50%), Gaps = 5/253 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D+ + RG + G AI+ +++++ P +A R
Sbjct: 194 DKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNR 253
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+DF +AI+ P +A+ +RG R LG+ AI D +KA+E +P+
Sbjct: 254 GLFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPD 313
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA-H 540
A + RG V + D A+ D + ++L ++ AY G S +G+ KK E A +
Sbjct: 314 DAFAYYNRGNVRYILGDKKGAIADYNKAIELKPDDAQAYFNRGNVRSELGD-KKGEIADY 372
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I+L ++ +A+ + DL + + A+ L + + + ++ AY RG + + LG
Sbjct: 373 NKVIELQPDYADAYINRGLVRYDLGDKKGAIADLNKAIELQPDYAFAYGNRGNVRYNLGD 432
Query: 601 HKKAIKDLSSGSR 613
K AI+DL ++
Sbjct: 433 KKGAIEDLQKAAQ 445
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + ++K+ + D L+ RG + G AI+ +++ ++ P Y +A R
Sbjct: 92 DKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNR 151
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+D+ +AI+ P A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 152 GLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPD 211
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A RG V + D A+ DL+ ++L + AY GL S +G+ K A
Sbjct: 212 YAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFN 271
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L + +A+ L + + A+ + + + + AY+ RG + + LG
Sbjct: 272 KAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDK 331
Query: 602 KKAIKDLS 609
K AI D +
Sbjct: 332 KGAIADYN 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D + RG+ + G AI+ ++ ++ P A + R
Sbjct: 58 DKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPDLALAYVNR 117
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+D+ +AI+ P +A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 118 GAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPD 177
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG+V + D A+ D + ++L + AY G S +G+ K A
Sbjct: 178 LALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLN 237
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K I+L + +A+ + F +L + + A+ + + + ++AY+ RG + + LG
Sbjct: 238 KVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDK 297
Query: 602 KKAIKDLS 609
K AI D +
Sbjct: 298 KGAITDFN 305
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITAR----IELA-KLCSLRNWSKAIRILDSLLA 64
RY L I + ++ + + +A A R EL K ++ + +KAI L LA
Sbjct: 53 RYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIE-LQPDLA 111
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
+Y NR S+L K I D +KA++L P QAY +G S LG K+ A++
Sbjct: 112 LAY-----VNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIA 166
Query: 125 VWEKGYE 131
+ K E
Sbjct: 167 DYNKAIE 173
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLLA 64
R +L I + ++ + + A A R EL K ++ +++KAI + L
Sbjct: 121 RSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLAL 180
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
Y NR S+L K I D +KA++L P QAY +G S LG K+ A+
Sbjct: 181 AYY------NRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAI- 233
Query: 125 VWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
ADL + +EL+ L A +R +
Sbjct: 234 -------------ADLNKVIELKPDLAQAYYNRGL 255
>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1022
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N+G+Y AI+ + Q L+ DP Y A + RG A + E + AI+D+ +A++ N
Sbjct: 303 NRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A GE AI D +A+ +P SA + RG +++ A+ D
Sbjct: 363 PSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITD 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ YT G S GEY +A + A+Q D + A+ + ++
Sbjct: 423 YNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
++A+ Q + ++ ++ AY+ RGL L G+ +AI + + +++ + R
Sbjct: 483 EYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINR 542
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 3/246 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G Y AI+ +++ L+ DP +P RG A + E + AI+D+ +A+Q +
Sbjct: 99 NRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLD 158
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A GE AI D S+AL +P A RG V ++N A+ D
Sbjct: 159 PNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIAD 218
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ D + AY GLA ++GEY +A + +A++L+ ++ A + ++
Sbjct: 219 YNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKG 278
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
++A+ Q L+++ ++ AY+ RGL G++ +AI D S R ++I + R
Sbjct: 279 EYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNR 338
Query: 626 ---WRN 628
+RN
Sbjct: 339 GDAFRN 344
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N+G+Y AI+ ++Q L+ DP A + RG + E + AI+D+ +A++ +
Sbjct: 31 TRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A G+ AI D ++AL+ +P + + RG +++ A+ D
Sbjct: 91 PRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G A GEY +A + +A++LD + A+ + ++
Sbjct: 151 YNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKG 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
+A+ Q L D + AY+ RGL +G++ +AI D + R ++I + R
Sbjct: 211 EYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNR 270
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 8/250 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N+G+ AI+ ++Q L+ +P Y A RG A + E + AI+D+ +AI+
Sbjct: 336 VNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRL 395
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + A+ RG A + GE AI D ++AL+ P SA RG V +++ A+
Sbjct: 396 DPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIA 455
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ D + AYT G S GEY +A + +AIQL+ ++ A+ + Q+
Sbjct: 456 DYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNK 515
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH---LIW 621
++A+ Q L ++ R+ AY RG G+ +A+ D + G + H L +
Sbjct: 516 GEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQG--LELDHNNVLAY 573
Query: 622 NLTRWRNLCF 631
N R LCF
Sbjct: 574 N---NRGLCF 580
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G+Y AI+ + Q L+ DP Y A RG + E AI+D+ +A+Q +
Sbjct: 167 NRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQALQFD 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P A+ RG A +GE AI D ++AL EP N AD +G +
Sbjct: 227 PKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKG-------E 279
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ A+ D + L+ AY GLA + GEY +A + +A++LD ++ A+ +
Sbjct: 280 YDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRG 339
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+++ ++ A+ Q L ++ +S AY+ RGL G++ +AI D R
Sbjct: 340 DAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIR 394
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 3/236 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ S S + + +RG+A N+G+Y AI+ ++Q ++ DP A RG A + E
Sbjct: 360 RLNPSYSTAYN---TRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEY 416
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ +A+Q NP + + RG + GE AI D AL+F+P A RG
Sbjct: 417 DRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGD 476
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V +++ A+ + ++L+ + AY GLAL + GE +A + +A+QL+ ++
Sbjct: 477 VFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYI 536
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ + ++ ++A+ Q L +D AY+ RGL G++ AI D
Sbjct: 537 VAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIAD 592
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y AIS + + L+ +P Y A++ R A + E + AI D+ +A+ N
Sbjct: 235 NRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLN 294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVE 504
P+ A+ RG A GE AI D S+AL +P RG F+ K N A+
Sbjct: 295 PNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDA-FRNKGENDVAIA 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +AY GLA + GEY +A + +AI+LD A+ + Q
Sbjct: 354 DYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSK 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Q L ++ + + Y RG + G++ +AI D
Sbjct: 414 GEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIAD 456
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N+G+ AI+ +DQ L+ +P Y A I RG A + E + A+SD+ + ++ +
Sbjct: 507 NRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELD 566
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG GE AI D AL+ +P A RG K +++ A+ D
Sbjct: 567 HNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIAD 626
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AY G A S G Y A + A+ L A+ H +
Sbjct: 627 YDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFSFKG 686
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
N + ++ L + + ++ ++++AY RG+ G+ +A+ D + +R + P L
Sbjct: 687 NLDHSISDLSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAAR-LKPEL 739
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y AI +DQ L +P Y A RG A + E + AI+D+++A++ +P A+
Sbjct: 277 KGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFV 336
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A GE+ AI D ++AL P+ + + RG+ +++ A+ D ++LD
Sbjct: 337 NRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLD 396
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ AY G AL S GEY +A + +A+QL+ + + +Q ++A+
Sbjct: 397 PKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIAD 456
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L D +++ AY RG + G++ +AI
Sbjct: 457 YDLALQFDPKYAIAYTNRGDVFRSKGEYDRAI 488
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ ++Q L+ DP A RG A E + AISD+TEA++
Sbjct: 201 NRGDVFRSKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLE 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A R A GE AI D +AL PN A + RG+ +++ A+ D
Sbjct: 261 PKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIAD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD + A+ G A + GE A + +A++L+ ++ A+ +Q+
Sbjct: 321 YSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ +Q + +D + + AY+ RG L G++ +AI D +
Sbjct: 381 EYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITDYN 424
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 14/229 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +D L+ DP Y A RG + E + AI+++ +AIQ N
Sbjct: 439 NRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLN 498
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P A+ RG A GE AI + +AL+ P N D +G + D
Sbjct: 499 PKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSD 558
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+N +E LD N AY GL + GEY A + A+Q+D + A+ +
Sbjct: 559 YNQGLE-------LDHNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRG 611
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+Q + ++A+ + L +D + + AY+ RG G + AI D
Sbjct: 612 FAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIAD 660
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ ++ +P Y A RG A + E + AI+++ +A+Q N
Sbjct: 473 NRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLN 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE A+ D ++ LE + N+ + RG+ +++ A+ D
Sbjct: 533 PRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIAD 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + +A+ G A EY +A + +A+QLD A+ + +Q
Sbjct: 593 YDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKG 652
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ A+ L + + AY+ RG + G +I DLS R
Sbjct: 653 AYDLAIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIR 700
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G+Y AI+ +D L+ DP Y A + RG A + E + AI+D+ A+Q +
Sbjct: 575 NRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLD 634
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + A+ RG A + G AI D AL +P A+ + RG V F FK + + ++
Sbjct: 635 PKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTV-FSFKGNLDHSIS 693
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEA 553
DLS ++L+ + AY G+ + GE + AE A LK ++ D FL A
Sbjct: 694 DLSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAARLKPELEDDAAFLTA 748
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ ++Q L+ +P RG + E + AI+D+ A+Q +
Sbjct: 405 NRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + GE AI + +A++ P + RG+ + + A+ +
Sbjct: 465 PKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIAN 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ AY G A S GE +A + + ++LD N + A+ + +Q+
Sbjct: 525 YDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRG 584
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ L ID +++ A+ RG ++ +AI D
Sbjct: 585 EYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIAD 626
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+ RG + GE AI D ++AL +P RG +++ A+ D + +
Sbjct: 28 GYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQAL 87
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD + AY G A G+Y++A + +A+QLD + + + ++A
Sbjct: 88 RLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRA 147
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ Q L +D ++ AY+ RG G G++ +AI D S R
Sbjct: 148 IADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALR 190
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR F + + + I D D+ALQLDP AY +G AF + G + A++ Y+
Sbjct: 607 FVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIA----DYD 662
Query: 132 HAL------------------------HQSADLKQFLELEELLTAAKQDRSVTCE 162
HAL H +DL + + L A QDR +T +
Sbjct: 663 HALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDRGITYQ 717
>gi|390477670|ref|XP_002807781.2| PREDICTED: tetratricopeptide repeat protein 13 [Callithrix jacchus]
Length = 726
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 61 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 120
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 121 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 179
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 180 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 239
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 240 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 293
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 154 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 213
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 214 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 273
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 274 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 331
>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 850
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q ++GK+ A++ + + ++ DP Y EA RG A + + AI ++ +A++ NP+
Sbjct: 10 GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEINPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ +G + AL + EAI +K +E +PN +G+ F F A+ + +
Sbjct: 70 YKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFN 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ D + A + L+ +G+ ++A + KAI LD N+ A+ + Y +
Sbjct: 130 KALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQK 189
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++AL+ +Q++ ID +F+ AY GL L LGQ+++AI+
Sbjct: 190 QQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQ 228
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 120/231 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ +NEG+ A+ F QI+ DP + A I G + + AI + +AIQ
Sbjct: 177 LNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQI 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ +A A+ + LG++ EA+ + +K +E PN ++ +G + + A++
Sbjct: 237 DKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIK 296
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++LD +K Y G++L ++G Y+++ E + KAIQLD N + + + L
Sbjct: 297 NYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEAL 356
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
S+ AL+C + + ID F+ +Y R L+ LG +A++D+ S+ +
Sbjct: 357 GKSQDALDCYNKAIQIDPFFTLSYANRALVNFNLGNKDQAVEDMKQASKLL 407
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 127/242 (52%), Gaps = 3/242 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +K+ I+ +++L+ +GI+ + AIS + ++++ DP Y +A + +G
Sbjct: 56 AIKNYNKALEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCF 115
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + A+++F +A+Q +P A + LG+S +A+ KA+ +PN +
Sbjct: 116 FNLNQFQEALNNFNKALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNA 175
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG++ A++D + +D + +AY +GL L +G+ ++A + + KAIQ
Sbjct: 176 YLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQ 235
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D+N A+ + + L +++AL +V+ I+ +S AY +G L G++++AI
Sbjct: 236 IDKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAI 295
Query: 606 KD 607
K+
Sbjct: 296 KN 297
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + Q + + A++ +++AI+ +P EA+ RG A +L + EAI++ +KALE PN
Sbjct: 10 GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEINPN 69
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ +GI K A+ + V++D K A+ GL ++ ++++A
Sbjct: 70 YKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFN 129
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA+Q D + A ++ YQ L S++AL + + +D + AY RGLL GQ
Sbjct: 130 KALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQK 189
Query: 602 KKAIKDL 608
++A++D
Sbjct: 190 QQALQDF 196
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
H+ G+ F AV S ++LD + AY G+AL+S+ +Y++A + + KA+++
Sbjct: 7 HQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEI 66
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N+ A+ + Q L ++A+ C +V+ ID + +A+ +GL L Q ++A+
Sbjct: 67 NPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALN 126
Query: 607 DLSSG 611
+ +
Sbjct: 127 NFNKA 131
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++SKAI LD ++Y CNR + L ++ I++ +KAL+++P AY
Sbjct: 22 AVNSYSKAIE-LDPQYTEAY-----CNRGVALNSLNQYQEAIKNYNKALEINPNYKLAYY 75
Query: 108 LKGCAFSALGRKEEALSVWEKGYE-HALHQSADLKQ---FLELEELLTAAKQ-DRSVTCE 162
KG + AL + +EA+S + K E ++ A L + F L + A ++++ C+
Sbjct: 76 NKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFNKALQCD 135
Query: 163 -------YDVSNSMSSLTVSESGLNANDKMSETSENH 192
Y+++ S L S+ L DK N+
Sbjct: 136 PKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNY 172
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLC--------SLRNWSKAIRILDSLL 63
+L + + I D+ +++D +A A A LC +L N++K I I +
Sbjct: 219 QLGQNQEAIQHYDKAIQIDK---NAFLAYYNKAILCKQLGKNQEALNNYNKVIEI-NPNY 274
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ +Y N+ + ++ I++ DK +QLDP Q Y KG + ALGR +E++
Sbjct: 275 SNAY-----LNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESI 329
Query: 124 SVWEKG 129
+ K
Sbjct: 330 ENYNKA 335
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALE 572
Y GL S G++++A ++ KAI+LD + EA+ L Q+ + + N KALE
Sbjct: 6 YHQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALE 65
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
I+ + AY+ +G+ L L Q ++AI
Sbjct: 66 -------INPNYKLAYYNKGISLQALKQLQEAI 91
>gi|390438475|ref|ZP_10226939.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
sp. T1-4]
gi|389838101|emb|CCI31063.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
sp. T1-4]
Length = 639
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 123/228 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+ + N G AI F+Q ++ +P Y A RG+A++ + AI+D+ +AI+ N
Sbjct: 387 NNGVDKYNLGDNQGAIKDFNQAIQINPDYANAYYDRGSAKSNLGDKLGAIADYNQAIKLN 446
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A+ LG + AI D ++A++ +P+ A+ RG+ + D A++D
Sbjct: 447 PDDADAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKD 506
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ ++ Y G A ++G+ + A + + +AI+L+ +F + + +L
Sbjct: 507 YNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLG 566
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + A+ Q + ++ F+ Y+ RGL+ L ++KAIKD S+
Sbjct: 567 DKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDFRQASQ 614
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +SRG+A+ N G AI+ ++Q +K P Y RG A++ + + AI D+ +
Sbjct: 450 ADAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQ 509
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP + + RG A+ LG+ AI+D ++A++ P+ A + RG + D
Sbjct: 510 AIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDKQ 569
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
A+ D + +KL+ + Y GL + + +KA + +A QL R
Sbjct: 570 GAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDFRQASQLHR 617
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I N G AI+ +Q +K + A G + + + AI DF +AIQ NP
Sbjct: 356 IGNYNLGDNQGAIADQNQAIKLNSDDAVAYHNNGVDKYNLGDNQGAIKDFNQAIQINPDY 415
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
A+ RG A++ LG+ + AI D ++A++ P+ AD RG+ + A+ D +
Sbjct: 416 ANAYYDRGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGLAKYNLGHNQGAIADYNQ 475
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KL + + Y + G+A S +G+ + A + + +AI+L N +
Sbjct: 476 AIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQAIKL-------------------NPD 516
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A Y+ RG + LG + AIKD +
Sbjct: 517 DA---------------DVYNNRGWAKYNLGDKQGAIKDYN 542
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G AI ++Q +K +P + RG A+ + + AI D+ +AI+ NP
Sbjct: 490 RGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNP 549
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A+ LG+ AI D ++A++ P+ A + RG++ + D A++D
Sbjct: 550 DFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDF 609
Query: 507 SACVKLDKE 515
+L ++
Sbjct: 610 RQASQLHRQ 618
>gi|355746300|gb|EHH50925.1| hypothetical protein EGM_01832, partial [Macaca fascicularis]
Length = 775
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 57 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 116
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 117 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 175
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 176 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 235
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 236 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 289
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 150 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 209
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 210 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 269
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 270 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 327
>gi|428310633|ref|YP_007121610.1| hypothetical protein Mic7113_2401 [Microcoleus sp. PCC 7113]
gi|428252245|gb|AFZ18204.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 595
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + + AI FDQ+++ P EA RG + AAI D + I+ N
Sbjct: 277 NRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDLNQVIRLN 336
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ G+ EA++D +KALE EP +A + RG F D+ AVED
Sbjct: 337 PNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVED 396
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ +N +AYT A ++ ++ A +AI L+ N E + + Y +L
Sbjct: 397 YTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLK 456
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + AL+ Q + + AY RG + LG + A++D + R
Sbjct: 457 DYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIR 504
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ + AI FDQ ++ +P P A RG A + +AAI D+++ I+
Sbjct: 209 NQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLE 268
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR L + AI+D + + +PN A+ ++RGI F+ K++ AA+ED
Sbjct: 269 PNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIED 328
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ AY GLA S G+ ++A E + KA++L+ +A+ + L
Sbjct: 329 LNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLG 388
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+E Q + ++ + + AY R L H+ AI D
Sbjct: 389 DYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVD 430
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG+A+ G A+ + + L+ +P +A RG AR + A+ D+T+AI+
Sbjct: 344 VSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVEDYTQAIEL 403
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ R AR L +AI D ++A+ PN + + R I F KD+ A++
Sbjct: 404 EPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLKDYQNALQ 463
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++ + N +AY+ G ++G+ + A E + +AI+L+ N A+ + +DL
Sbjct: 464 DCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNRADARRDL 523
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
+ + A+ + ++ + + AY+ RGL +G +AI D SR +
Sbjct: 524 GDQQGAIADYTDAIRLNPKNAFAYYGRGLTHLAVGNKSEAITDFQEASRLFL 575
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 435 ISDFTEAIQS-NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
++ F +QS N + +++ +G + + AIQD +A+ PN+ RG +
Sbjct: 189 VAGFLVLLQSQNQTNAKSYYNQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAH 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D+ AA+ED S ++L+ AY GLA + +++ A E + I+L N EA
Sbjct: 249 YDLGDYKAAIEDYSQMIRLEPNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEA 308
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y +L N A+E L QV+ ++ +KAY RGL G ++A++D +
Sbjct: 309 YYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYT 364
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQS 66
++ Y L I + +++R++ A A R LA+ L++W AI D L+ Q
Sbjct: 246 NAHYDLGDYKAAIEDYSQMIRLEPNKAGAYYNR-GLARY-DLQDWQGAIEDFDQLIRLQP 303
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ + R Y +L+ ++ I D ++ ++L+P +AY+ +G A S G + EA+ +
Sbjct: 304 NDAEAYYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDY 363
Query: 127 EKGYE 131
K E
Sbjct: 364 TKALE 368
>gi|403300215|ref|XP_003940847.1| PREDICTED: tetratricopeptide repeat protein 13 [Saimiri boliviensis
boliviensis]
Length = 836
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 118 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 177
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 178 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 236
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 237 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 296
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 297 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 350
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 211 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 270
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 271 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 330
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 331 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 388
>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 988
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 115/222 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ+L+ +P A RG A + E + AI+D+ +A+Q N
Sbjct: 65 NRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLN 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A++ RG + GE AI D S+AL F P + RG+V +++ A+ D
Sbjct: 125 PKYAIAYRNRGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIAD 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + AY GLA S EY +A +A++LD + A+ + +Q
Sbjct: 185 FDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKG 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Q L +D +++ AY RG G++ +AI D
Sbjct: 245 EHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIAD 286
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A RG A + E + AI+D+ + ++ N
Sbjct: 31 TRGYKFQSKGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLN 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE AI D +AL+ P A RG V + + A+ D
Sbjct: 91 PKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKGEHDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ + + AY GL S GEY +A +A++LD ++ A+ + +Q
Sbjct: 151 YSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKR 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L +D ++ AY+ RGL G+H +AI D R
Sbjct: 211 EYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALR 258
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V R++ I+ + +RG A ++G+Y AI+ +DQ L+ +P Y A RG +
Sbjct: 86 VLRLNPKNVIAYN---NRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKG 142
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI+D+++A++ NP A+ RG + GE AI D +AL +P + R
Sbjct: 143 EHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNR 202
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ ++++ A+ D ++LD + K AY GL S GE+ +A +A++LD
Sbjct: 203 GLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPK 262
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + ++ ++A+ Q L +D +++ AY R + +A+ D
Sbjct: 263 YTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYD 322
Query: 610 SGSR 613
R
Sbjct: 323 QALR 326
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++G+Y AI+ FDQ L+ DP Y A RG A +RE + AI+DF +A++ +
Sbjct: 167 NRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLD 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG + GE AI D +AL +P RG +++ A+ D
Sbjct: 227 SKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIAD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ LD + AYT A S +Y +A + +A++LD + A+ + F++
Sbjct: 287 YDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++A+ + L +D + AY+ RGL+ ++ AI D
Sbjct: 347 DYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADF 389
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L DP Y A R A +R+ + A++D+ +A++ +
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A++ RG + G+ AI D +AL +P + + RG+V ++N A+ D
Sbjct: 329 PKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +D ++ Y G S GEY +A + +A+QLD + + +
Sbjct: 389 FDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
++AL Q L +D + + Y RG + G+H +AI D R + P I+
Sbjct: 449 EYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIFAYNN 507
Query: 626 WRNLCF 631
R L F
Sbjct: 508 -RGLVF 512
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 4/247 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ DP Y RG A + E + A++D+ +++Q +
Sbjct: 405 NRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG GE AI D +AL +P + RG+V ++N A+ D
Sbjct: 465 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILD 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
++LD + AY G S GEY +A + +A+Q + ++ A+ G FY+
Sbjct: 525 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 583
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
++A+ ++ L +D + + A++ RG L+ G++ +AI DL R + P N
Sbjct: 584 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAIADLDQALR-LKPGFT-NPH 641
Query: 625 RWRNLCF 631
R + F
Sbjct: 642 YHRGMAF 648
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E AI D+ + ++ +P A+
Sbjct: 481 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYA 540
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + GE AI D +AL+ P + RG+ ++ + + A+ D ++LD
Sbjct: 541 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 600
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +A+ G AL+ GEY +A +A++L F H ++ + ++AL
Sbjct: 601 PKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALAD 660
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
L + + ++ +++ AY RG+ G+ +A+ DL+ R + P L + T
Sbjct: 661 LNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVR-LKPELEADAT 710
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G Y AI+ +D+ L+ DP A RG + E AI+DF +A+ +
Sbjct: 337 NRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLID 396
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ RG + GE AI + +AL+ +P A + + RG+ ++ +++ A+ D
Sbjct: 397 PKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALAD 456
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + YT G GE+ +A + +A++LD ++ A+ + +Q+
Sbjct: 457 YDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKG 516
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI-WNLT 624
+A+ Q L +D +++ AY RG G++ +AI D + ++I +N
Sbjct: 517 EYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYN-- 574
Query: 625 RWRNLCF 631
R L F
Sbjct: 575 -GRGLAF 580
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ ++ +Y AI+ FDQ L DP +A+I R F+ E + AI+++ +A+Q
Sbjct: 371 NRGLVFQSKNEYNLAIADFDQALLIDPK--DAVIYRNRGDVFRSKGEYDRAIANYDQALQ 428
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+P RG A GE A+ D ++L+ +P A + RG V F+ K + + A
Sbjct: 429 LDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDV-FRIKGEHDRA 487
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + AY GL + GEY +A + + ++LD + A+ + +Q
Sbjct: 488 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQ 547
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L + ++ AY+ RGL + G+H +AI D R
Sbjct: 548 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALR 598
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A ++ +Y AI+ FDQ L+ D Y A RG + E + AI+DF +A++ +
Sbjct: 201 NRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLD 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A++ RG A + GE AI D +AL +P R +D++ A+ D
Sbjct: 261 PKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALAD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G S G+Y +A + +A++LD A+ + +Q
Sbjct: 321 YDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKN 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ Q L ID + + Y RG + G++ +AI
Sbjct: 381 EYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAI 420
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A GRG A + E + AI+D+ EA++ +
Sbjct: 541 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + A+ RG A GE AI DL +AL +P + + RG+ F+ K D + A+
Sbjct: 601 PKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMA-FRHKGDLDRALA 659
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEAWG 555
DL+ V+L+ + AY G+ + GE + AE LK ++ D FL+ G
Sbjct: 660 DLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRG 716
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A ++ Y A++ +DQ L+ DP A RG + + + AI+D+ EA++ +
Sbjct: 303 ARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLD 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + E AI D +AL +P A I RG V +++ A+ +
Sbjct: 363 PKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIAN 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +++QLD + + ++
Sbjct: 423 YDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Q L +D ++ AY+ RGL+ G++ +AI D
Sbjct: 483 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILD 524
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G++ AI+ + Q L+ +P Y A RG + E + AI+DF +A++ +
Sbjct: 133 NRGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLD 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL + + RG+ + + A+ D
Sbjct: 193 PKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + AY G A S GEY +A + +A+ LD + A+ +Q
Sbjct: 253 FDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKR 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++AL Q L +D + AY RG G + +AI D R
Sbjct: 313 DYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALR 360
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
YR + + + + D+ +++D A T R ++ ++ ++ ++ +A+R LD
Sbjct: 445 YRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 503
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR + + I D D+ L+LDP AY +G F + G + A++
Sbjct: 504 AYN-----NRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 558
Query: 126 WEKGYEH 132
+++ +H
Sbjct: 559 YDQALQH 565
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 2/245 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ +Y AI+ +DQ L+ DP Y I RG A + E AI+DF +A++ +P
Sbjct: 236 RGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A + GE+ AI D +AL F P A RG +++ A+ D
Sbjct: 296 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 355
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ +AY GLA GEY +A + +A++LD A+ + +
Sbjct: 356 TQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 415
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
++A+ ++ L +D + + AY+ RG L+ G + +AI DL R + P N
Sbjct: 416 HDRAIADYEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALR-LKPGFT-NPHYH 473
Query: 627 RNLCF 631
R + F
Sbjct: 474 RGMAF 478
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A ++G+Y AI+ FDQ L+ DP A GRG A + E + AI+D+ +A++
Sbjct: 268 INRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRF 327
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG A GE AI D ++AL +P SA + RG+ +++ A+
Sbjct: 328 NPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIA 387
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD ++ +AYT G A GE+ +A + +A++LD A+
Sbjct: 388 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSAAAYNGRGAALNKK 447
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++A+ L Q L + F+ ++ RG+ G +A+ DL+ R
Sbjct: 448 GDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVR 496
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ +P YP A RG + E + AI+D+ +A++ N
Sbjct: 167 NRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLN 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL +P A+I RG ++N A+ D
Sbjct: 227 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIAD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AYT G A S GE +A + +A++ + + A+ + +++
Sbjct: 287 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L +D + + AY+ RGL G++ +AI D R
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALR 394
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A ++G+ AI+ +DQ L+ +P Y A RG A + E + AI+D+T+A++ +
Sbjct: 303 GRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLD 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A RG ++ + + A+ D
Sbjct: 363 PQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIAD 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G AL+ G+Y +A +A++L F H ++
Sbjct: 423 YEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
+ ++AL L + + ++ +++ AY RG+ G+ +A+ DL+ R + P L + T
Sbjct: 483 DLDRALADLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVR-LKPELEADAT 540
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +
Sbjct: 31 NRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A+I RG+ ++ +++ A+ D
Sbjct: 91 PKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + YT G A S GEY +A + +A++ + + A+ + +Q
Sbjct: 151 YDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKG 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L ++ + AY RGL ++ +AI D R
Sbjct: 211 EYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALR 258
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP Y I RG A + E + AI+D+ +A++ +
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 159
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A + GE AI D +AL F P RG +++ A+ D
Sbjct: 160 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADY 219
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E+ +AYT+ GLA S EY +A + +A++LD + + + ++
Sbjct: 220 DQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGE 279
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+A+ Q L +D + AY RG G++ +AI D R
Sbjct: 280 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALR 326
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A +G+Y AI+ +DQ L+ D RG A + E + AI+D+ +A++
Sbjct: 132 INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 191
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG + GE AI D +AL P A RG+ +++ A+
Sbjct: 192 NPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 251
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + + Y G A S GEY +A +A++LD + A+ ++
Sbjct: 252 DYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 311
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+++A+ Q L + +++ AY RG G++ +AI D + R
Sbjct: 312 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALR 360
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +P
Sbjct: 66 RGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A GE AI D +AL + A + RG +++ A+ D
Sbjct: 126 KYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADY 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + + AY G S GEY +A + +A++L+ A+ H +Q +
Sbjct: 186 DQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSE 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L +D +++ Y RG G++ +AI D R
Sbjct: 246 YDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALR 292
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 224/542 (41%), Gaps = 66/542 (12%)
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAF---------- 113
A + + D NR + + I D D+AL+LDP AY +G AF
Sbjct: 21 AYALDATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAI 80
Query: 114 ------------SALGRKEEALSVWEKG-YEHALHQSADLKQFLELEELLTAAKQDRSVT 160
SA+ L+ + KG Y+ A+ AD Q L L+ +R +
Sbjct: 81 ADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAI---ADYDQALRLDPKYANIYINRGLA 137
Query: 161 ----CEYD--VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQS----RDVSET 210
EYD +++ +L L+ D + T N+ D S + D +
Sbjct: 138 FYRKGEYDRAIADYDQALR-----LDLRDAVVYT----NRGDAFRSKGEYDRAIADYDQA 188
Query: 211 CSKSSHDPDLCNGRSD--EAKGGSSVPVSK--SGLHINGKLREVSENHNGSSDGSKSTHA 266
+ P R D ++KG ++ L +N + + H G + SKS +
Sbjct: 189 LRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPE-DAAAYTHRGLAFQSKSEY- 246
Query: 267 SRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSE 326
R ++ ++ D N I++ G D L D S+ +
Sbjct: 247 DRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGD 306
Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFRL 385
++ +D +D ++ + + K+ +A RNK I+ ++++ +D +
Sbjct: 307 AFRSKGENDRAIADYDQA-LRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQS 365
Query: 386 S-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+ RG+A ++G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ E
Sbjct: 366 ATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEE 425
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DF 499
A++ +P + A+ RG A G+ AI DL +AL +P + + RG+ F+ K D
Sbjct: 426 ALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMA-FRHKGDL 484
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEA 553
+ A+ DL+ V+L+ + AY G+ + GE + AE LK ++ D FL+
Sbjct: 485 DRALADLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKV 544
Query: 554 WG 555
G
Sbjct: 545 RG 546
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
+ I + D+ +R++ A+A T R LA S + +AI D L + +I NR
Sbjct: 214 RAIADYDQALRLNPEDAAAYTHR-GLA-FQSKSEYDRAIADYDQALRLDPKYANIYINRG 271
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + + I D D+AL+LDP + AY +G AF + G + A++ +++
Sbjct: 272 YAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQ 323
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A S GEY +A + +A++LD A+ H + ++A+ Q L +D +
Sbjct: 33 GDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPK 92
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ AY RGL + G++ +AI D R + P N+ R L F
Sbjct: 93 SAVAYTHRGLAFYRKGEYDRAIADYDQALR-LDPKYA-NIYINRGLAF 138
>gi|395849727|ref|XP_003797467.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Otolemur
garnettii]
Length = 863
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 145 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 204
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 205 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 263
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 264 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 323
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 324 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 377
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 238 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 297
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 298 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 357
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 358 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 415
>gi|281350820|gb|EFB26404.1| hypothetical protein PANDA_005322 [Ailuropoda melanoleuca]
Length = 770
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 52 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 112 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 171 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 230
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 231 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 284
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|50949446|emb|CAH10599.1| hypothetical protein [Homo sapiens]
Length = 785
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 67 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 126
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 127 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 185
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 186 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 245
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 246 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 299
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 160 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 219
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 220 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 279
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 280 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 337
>gi|395728894|ref|XP_002809357.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
[Pongo abelii]
Length = 807
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 100 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 159
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 160 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 218
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 219 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 278
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 279 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 332
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 193 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 252
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 253 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 312
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 313 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 370
>gi|300871059|ref|YP_003785931.1| hypothetical protein BP951000_1446 [Brachyspira pilosicoli 95/1000]
gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 653
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 123/222 (55%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + N +Y AI +D+ ++ +P A RG A+ + + AI DF ++I+ + +
Sbjct: 347 GIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQN 406
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E + RG +A LG + EAI+D KA+E PN++ + RGI + A++D
Sbjct: 407 SSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFD 466
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + AY+ G A S + +Y++A + + KAI+L+ N+ EA+ + +L+
Sbjct: 467 KAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKTNLSLY 526
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+E + + ++ S+ Y+ RG LG +++AIKD +
Sbjct: 527 KEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYN 568
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A++N G+Y AI FD+ ++ E RG +A + AI D+ +AI+ N
Sbjct: 379 NRGVAKMNLGQYKEAIKDFDKSIELSQNSSETYNNRGNVKANLGLNKEAIEDYDKAIELN 438
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG +++ LG EAI+D KA+E PNS++ RG + A++D
Sbjct: 439 PNNSSAYNNRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKD 498
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ AY G A +++ YK+A E + KAI+L+ N E + + +L
Sbjct: 499 YNKAIELNPNYSEAYNNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKANLG 558
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+E+A++ + + ++ ++AY L L + K+ K+
Sbjct: 559 NNEEAIKDYNRSIELNSNNAQAYFNMVLAKQLLANNTKSKKE 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ + G Y AI FD+ ++ +P EA RG A++ + E AI D+ +AI+ N
Sbjct: 447 NRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELN 506
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A+ L EA++D +KA+E PN++++ + RG + A++D
Sbjct: 507 PNYSEAYNNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKD 566
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEAW 554
+ ++L+ N AY + LA + K+++ K I+ N F+E +
Sbjct: 567 YNRSIELNSNNAQAYFNMVLAKQLLANNTKSKKEKDKLIEEAYNDFIEGY 616
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR S L L+K I+D DKA++L+P +AY +G A S L + EEA+ + K E
Sbjct: 447 NRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIE 504
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI L+ +++Y NR + L L+K + D +KA++L+P + Y
Sbjct: 495 AIKDYNKAIE-LNPNYSEAY-----NNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYN 548
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A + LG EEA+ + + E
Sbjct: 549 NRGTAKANLGNNEEAIKDYNRSIE 572
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR + L L+K I D DKA++L+P AY +G + S LG +EA+ ++K E
Sbjct: 413 NRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFDKAIE 470
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + L+ +K I D DKA++L+P AY +G A LG+ +EA+ ++K E
Sbjct: 345 NIGIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIE 402
>gi|414078029|ref|YP_006997347.1| hypothetical protein ANA_C12830 [Anabaena sp. 90]
gi|413971445|gb|AFW95534.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 442
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 12/234 (5%)
Query: 380 SVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++DF + +G+ ++G Y A++ FD L+ + A I RG + A
Sbjct: 10 NIDFDVVNALHQQGLDHYHDGNYQQALANFDAALELYANFSMAYINRGNIFHILGNYQKA 69
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+D+ + I+ NP+ EA+ RG + AL E AI + +++LE P + RG+V
Sbjct: 70 IADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYNRGLVYA 129
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +D+ A+ D + +K+ ++ AY GL S++G+Y+ A + + +A+Q++ + +
Sbjct: 130 RIQDYYQAIADFNQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQINPTLVSVY 189
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
G + L N E A+ Q L ID + AY+ RG++ ++AI+DL
Sbjct: 190 GFRANAHHHLGNYENAIIDYNQALQIDPHLATAYYGRGMV-------REAIQDL 236
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A + G Y +AI ++Q L+ DP A GRG R ++L A++D+T+AI+ +P
Sbjct: 192 RANAHHHLGNYENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSP 251
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +RG A LG AIQD ++AL+ + +S + RG + KDF A+ D
Sbjct: 252 EFASAYCKRGDAYKLLGNIQTAIQDYNQALKIDSDSLAAYYHRGSSRYIAKDFTGAISDF 311
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ Y+ A ++ EY+KA + +AI ++ N E W + + + L
Sbjct: 312 TEALRLDSQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGE 371
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
AL L Q + + R+ AY +R + LG AI D
Sbjct: 372 LNTALADLNQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADF 413
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + +Y SAIS +++ L+ +P + A RG A ++ AI+DF +A++
Sbjct: 89 NRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADFNQALKIV 148
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG + LG+ AI+D ++AL+ P + R + ++ A+ D
Sbjct: 149 PDDIQAYYERGLVHSNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGNYENAIID 208
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++D +AY G+ +I + A + +AI++ F A+ Y+ L
Sbjct: 209 YNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRGDAYKLLG 268
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
N + A++ Q L ID AY+ RG + AI D + R
Sbjct: 269 NIQTAIQDYNQALKIDSDSLAAYYHRGSSRYIAKDFTGAISDFTEALR 316
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S S F R A+ +Y AIS + Q + +P E RG + EL A++D
Sbjct: 319 SQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGELNTALAD 378
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+AIQ P A+ R LG ++AI D K+ + S + + + I N
Sbjct: 379 LNQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADFRKSADLYSQSGNTRYYQEITN 434
>gi|426334205|ref|XP_004028650.1| PREDICTED: tetratricopeptide repeat protein 13 [Gorilla gorilla
gorilla]
Length = 782
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 76 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 136 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 194
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 195 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 254
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 255 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 296
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 157 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 216
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 217 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 276
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 277 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 334
>gi|109020014|ref|XP_001107062.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 5 [Macaca
mulatta]
Length = 860
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 142 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 201
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 202 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 260
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 261 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 320
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 321 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|397508273|ref|XP_003824586.1| PREDICTED: tetratricopeptide repeat protein 13 [Pan paniscus]
Length = 834
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD + S+ S LS + + + K+F + + S + L+ +
Sbjct: 89 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 144
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 145 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 204
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 205 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 263
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 264 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 323
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 324 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 363
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 224 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 283
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 284 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 343
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 344 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 401
>gi|73952538|ref|XP_546094.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Canis
lupus familiaris]
Length = 859
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 141 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 200
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 201 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 259
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 260 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 319
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 320 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 373
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 234 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 293
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 294 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 353
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 354 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 411
>gi|22761440|dbj|BAC11586.1| unnamed protein product [Homo sapiens]
Length = 860
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD + S+ S LS + + + K+F + + S + L+ +
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|170784867|ref|NP_078801.3| tetratricopeptide repeat protein 13 isoform a [Homo sapiens]
gi|212276494|sp|Q8NBP0.3|TTC13_HUMAN RecName: Full=Tetratricopeptide repeat protein 13; Short=TPR repeat
protein 13
Length = 860
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD + S+ S LS + + + K+F + + S + L+ +
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|114573138|ref|XP_001149480.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Pan
troglodytes]
gi|410218578|gb|JAA06508.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410264780|gb|JAA20356.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410306726|gb|JAA31963.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 860
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD + S+ S LS + + + K+F + + S + L+ +
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|302840983|ref|XP_002952037.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
nagariensis]
gi|300262623|gb|EFJ46828.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
nagariensis]
Length = 1509
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 29/233 (12%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQSNPS 447
+ Q+N G A +I D+++ P REL A A+ DF AI+ P
Sbjct: 778 VTQINSGNIVEAEAILDKVIAATP----------------RELGARAVEDFNVAIEVEPR 821
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNFKFKD 498
++WKRRGQAR+ALG+ A+ DL KA++ P + A+ E+G++ K +D
Sbjct: 822 YADSWKRRGQARSALGDHEGALTDLQKAIDLAPLFGGADSASSRAECWMEKGMIYQKMRD 881
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A +L VKLD N A+ LGL +S G+ + A+ KA++L+ EAW ++
Sbjct: 882 YRRACRELQQAVKLDPTNSQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPRLKEAWVNMG 941
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDL 608
Q ++ +++A L + L +D + H+ +L G+H AIK L
Sbjct: 942 QALKEEGRTKEAERVLLKALTLDAPDQPSVHVLRVLAQMKQQKGEHAAAIKLL 994
>gi|410975127|ref|XP_003993986.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Felis
catus]
Length = 684
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 6 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 65
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 66 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 124
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 125 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 184
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 185 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 226
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 87 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 146
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 147 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 206
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 207 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 264
>gi|301763435|ref|XP_002917148.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
13-like [Ailuropoda melanoleuca]
Length = 868
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 162 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 221
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 222 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 280
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 281 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 340
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 341 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 382
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 243 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 302
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 303 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 362
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 363 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 420
>gi|332266747|ref|XP_003282359.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Nomascus
leucogenys]
Length = 738
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 32 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 91
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 92 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 150
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 151 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 210
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 211 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 113 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 172
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 173 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 232
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 233 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 290
>gi|410334037|gb|JAA35965.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 859
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD + S+ S LS + + + K+F + + S + L+ +
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 543
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 124/238 (52%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S +D ++G+A + G+Y AI +D+ L+ D Y ++ +G A +
Sbjct: 259 CYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYL 318
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI + + ++ NP ++W +G + +G EAI+ K+LE P DIL+
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYN 378
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + + AV+ + + ++ A+ GLAL +G+Y++A + +AI+L
Sbjct: 379 KGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGP 438
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N ++W + DL E+A+EC + L ++ +S ++ +GL L LG++++AI+
Sbjct: 439 NNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIE 496
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + + D L +G + Y I D+ L+ DP +A G + F
Sbjct: 89 CFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFL 148
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E ++ + A++ NP+ +G + LG EAI KAL+ +PN A L
Sbjct: 149 ERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSN 208
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAI 544
+G+ + + ++E C ++ S Y+Y+ GLAL +G Y++A + +AI
Sbjct: 209 KGLSLYDLGRYEESIE----CYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAI 264
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+LD N +++W + DL E+A+ C + L +D +S + + +GL L L ++ +A
Sbjct: 265 ELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEA 324
Query: 605 I 605
I
Sbjct: 325 I 325
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Query: 373 ISKSKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I K++ +D + LS +G++ + G+Y +I +D+ LK + Y +G A
Sbjct: 190 ICYDKALKIDPNYAYALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYD 249
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E AI + AI+ + + ++W +G A LG EAI +ALE + N +D +
Sbjct: 250 MGRYEEAIGCYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQY 309
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G+ + ++ A+ ++L+ E+ ++ G++L +G Y++A E + K+++L+
Sbjct: 310 NKGLALQYLERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELN 369
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + DL E+A++ L I+ S A+H +GL LH LG++++AI
Sbjct: 370 PEDVDILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAI 427
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 111/211 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y ++ +++ L+ +P Y L+ +GT+ E AI + +A++ +P+ A +
Sbjct: 150 RYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNK 209
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + LG E+I+ KAL+ + + + +G+ + + A+ + ++LD
Sbjct: 210 GLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSN 269
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ ++ GLAL +G Y++A + +A++LD N+ ++ + Q L ++A+ C
Sbjct: 270 DIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYD 329
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L ++ + ++ +G+ LH +G++++AI+
Sbjct: 330 KTLELNPEDTDSWCNKGISLHEVGRYEEAIE 360
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + D ++GI+ G+Y AI +D+ L+ +P + L +G +
Sbjct: 327 CYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLYDL 386
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A+ + A+ N S +AW +G A LG+ EAI ++A+E PN++D +
Sbjct: 387 GRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGPNNSDSWNN 446
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + + A+E ++L+ + GL+L +G Y++A E + +A++L+
Sbjct: 447 KGNSLYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYYGRALELN 505
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +I F A++ +P AW +G + S EA+ K LE +P + D +G
Sbjct: 50 EKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVCFDKVLELDPEAFDAWLYKGY 109
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ +E L ++LD EN AY G + + Y+++ E + +A++L+ +
Sbjct: 110 TYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLECYNRALELNPTYT 169
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L E+A+ C + L ID ++ A +GL L+ LG+++++I+
Sbjct: 170 SLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNKGLSLYDLGRYEESIE 224
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 70/142 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S+ I + A + +++ + G+ + +++ ++E + ++LD +K+A+ G
Sbjct: 15 SIFFIMNTCYANTIDGKTSEDWFDEGLNYYDNENYEKSIECFNNALELDPYDKTAWFNKG 74
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L I +A K ++LD +AW + Y DL N +K +ECL + L +D
Sbjct: 75 YILYGIYRSNEALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPEN 134
Query: 585 SKAYHLRGLLLHGLGQHKKAIK 606
AY+ G + L +++++++
Sbjct: 135 LDAYYCEGDSYYFLERYEESLE 156
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ + Y L+ ++ I DKAL+LDP L AY +G ++ L R EE+L + + E
Sbjct: 107 KGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLECYNRALE 163
>gi|345319826|ref|XP_001521471.2| PREDICTED: tetratricopeptide repeat protein 13 [Ornithorhynchus
anatinus]
Length = 817
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 10/278 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD +S S S LS + + + K+F + +++++ L+ +
Sbjct: 57 SDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFA----TDNVNMNEELAIAYVLIG 112
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + + P
Sbjct: 113 SGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDR 172
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+ ++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ AA ED
Sbjct: 173 PDVLEQRAEILSPLGRVSEALSDLTKAIQLQP-SARLYRHRGTLHFISEDYAAAHEDFQQ 231
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L+ A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 232 SLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFE 291
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A E Q+ L ++ + LRG++L+ G ++A+K
Sbjct: 292 AATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALK 329
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F Q L +P P A++ +G + L+ A+ F EA++
Sbjct: 212 RGTLHFISEDYAAAHEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKA 271
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + +AL N L RG++ + A++
Sbjct: 272 DFIDAYKSLGQAYRELGNFEAATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSF 331
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 332 KRCLQLEPYNEVCQHMRGLSHVALGQFYEGIKAQTKVM 369
>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 560
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 5/239 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS++ L+ RG A+ G AI +Q L+ +P EA R AR +
Sbjct: 190 NQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRSNARCESGD 249
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI D +A++ NP EA+ RG AR G+ AI+D ++ L PN A RG
Sbjct: 250 VEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRG 309
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ DF A+ED + ++++ AY G A G++K A E +A++++ N+
Sbjct: 310 FARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNY 369
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + + + + +E Q L I+ ++AY RG+ G K AI+D +
Sbjct: 370 AEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIEDYN 428
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 114/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ G AI +Q L+ +P EA + RG AR +++ AI D+ + ++ N
Sbjct: 239 NRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRIN 298
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A++ RG AR G+ AI+D ++A+ PN A RG + DF A+ED
Sbjct: 299 PNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIED 358
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY GLA + G+ + E +A++++ N EA+ + ++
Sbjct: 359 FNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESG 418
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+E Q L+I+ ++AY RG G K AI+D +
Sbjct: 419 DVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCN 462
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + AI F+Q ++ +P +A RG AR + + AI DF +A++ N
Sbjct: 307 NRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRIN 366
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A G+ I+D ++AL PN A+ RG+ + D A+ED
Sbjct: 367 PNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIED 426
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G A G++K A E + ++++ NF EA+ + +
Sbjct: 427 YNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESG 486
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + A+E Q L I+ + AY RG K AI DL S+
Sbjct: 487 DMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADLQKASK 534
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + G AI ++Q L +P EA RG AR + + AI D + ++
Sbjct: 408 LNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRI 467
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG AR G+ AI+D ++AL PN A RG + +D A+
Sbjct: 468 NPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIA 527
Query: 505 DLSACVKL 512
DL KL
Sbjct: 528 DLQKASKL 535
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + AI +Q+L+ +P + EA + RG AR +++ AI D +A++ N
Sbjct: 443 NRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRIN 502
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
P+ A+ RG AR + AI DL KA + +I+ + I++
Sbjct: 503 PNLAIAYFNRGAARLQSRDKKGAIADLQKASKLFQQQGEIVQYQYILDL 551
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 158/407 (38%), Gaps = 72/407 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+ ++++AI I + LA++Y CNR + + I DC++AL+++P L +AY
Sbjct: 185 GMEDYNQAISI-NPNLAEAY-----CNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYC 238
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
+ A G E A+ D Q L + L A +R + +
Sbjct: 239 NRSNARCESGDVEGAIE--------------DCNQALRINPKLAEAYLNRG-NARRESGD 283
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSS---------SQSRDVSETCSKSSHDP 218
++ GL N +++ N + C+S +Q+ ++ +++ +
Sbjct: 284 IKRAIEDYNQGLRINPNLAQAYRNRGFAR-CESGDFKGAIEDFNQAIRINPNLAQAYQNR 342
Query: 219 DLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN----HNGSSDGSKSTHASRDASEIN 274
S + KG ++ L IN E N HN S D A IN
Sbjct: 343 GFARCESGDFKG--AIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRIN 400
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
+ +A +N R+ +G DV + + +L+ + +E+Y +
Sbjct: 401 PN-----------LAEAYLNRGVTRRESG--DVKGAIEDYNQALHINPNLAEAYQNRGFA 447
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
KS D FK + E N+ V RI+ + + + L+RG A++
Sbjct: 448 RCKSGD---------FKGAI--EDCNQ--------VLRINPNFAEAY---LNRGNARLES 485
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
G AI +Q L+ +P A RG AR R+ + AI+D +A
Sbjct: 486 GDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADLQKA 532
>gi|417412887|gb|JAA52802.1| Putative o-linked n-acetylglucosamine transferase ogt, partial
[Desmodus rotundus]
Length = 842
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 136 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVISLEP 195
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED
Sbjct: 196 DRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 254
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ A Y GL G K+A E+ A++ +F++A+ L Q Y++L N
Sbjct: 255 QQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKDALKQKVDFIDAYKSLGQAYRELGN 314
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 315 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 356
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 217 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFF 276
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F +A++ +A+K GQA LG A + KAL N L
Sbjct: 277 HRGLLKEAIESFKDALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 336
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 337 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 394
>gi|376003786|ref|ZP_09781589.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
gi|375327817|emb|CCE17342.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
Length = 1104
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 351 KW--DMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFD 405
KW D L+ +N R ++ K+ + D+ +RG+A G+Y AIS FD
Sbjct: 151 KWFDDGLQRANNGDFRG---AISSWEKAIELKPDYHEAWYNRGLALSLLGEYEQAISSFD 207
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
Q LK P EA RG A + ELE AIS F +A++ AW RG A LGE
Sbjct: 208 QALKYKPDDHEAWYNRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEY 267
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+AI +AL+++P+ + RG+ + A+ + ++ A+ G
Sbjct: 268 EQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKQDKHEAWYSRGN 327
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
ALS +GEY++A ++ +A++ ++ AW + DL EKA+ Q L F
Sbjct: 328 ALSDLGEYEQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKPDFH 387
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
+A++ RG L LG++++AI
Sbjct: 388 EAWYSRGNALSDLGEYEQAI 407
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+ AIS FDQ LK + A RG A E E AIS + +A++
Sbjct: 222 NRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYK 281
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A + LGE +AI +AL ++ + + + RG ++ A+
Sbjct: 282 PDYHVAWNNRGLALSDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISS 341
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ GLALS +GE +KA ++ +A+ +F EAW DL
Sbjct: 342 YDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLG 401
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q L F +A+ RGL L+ LG+ ++AI
Sbjct: 402 EYEQAISSYDQALKYKPDFHEAWFNRGLALYFLGELEQAI 441
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
++ ++ +DF + RG A + G+Y AIS +DQ LK P Y A RG A
Sbjct: 236 AISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYKPDYHVAWNNRGLAL 295
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ ELE AIS + +A+ EAW RG A + LGE +AI +AL+++P+
Sbjct: 296 SDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISSYDQALKYKPDYHVA 355
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + A+ + + A+ G ALS +GEY++A ++ +A++
Sbjct: 356 WNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALK 415
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+F EAW + L E+A+ Q L +A+ RG
Sbjct: 416 YKPDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRG 462
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + G+ AIS +DQ L P + EA RG A + E E AIS + +A++
Sbjct: 358 NRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALKYK 417
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P EAW RG A LGE +AI +AL+++P+ + RG V
Sbjct: 418 PDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRGNV 464
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +W KAI + Y NR S L ++ I D+AL+ P +A+
Sbjct: 168 AISSWEKAIELKPDYHEAWY------NRGLALSLLGEYEQAISSFDQALKYKPDDHEAWY 221
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHAL-------HQSADLKQFLELEELLTAAKQDRSVT 160
+G A S LG E+A+S +++ ++ L ++ LK E E+ +++ Q
Sbjct: 222 NRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYK 281
Query: 161 CEYDVSNSMSSLTVSESG 178
+Y V+ + L +S+ G
Sbjct: 282 PDYHVAWNNRGLALSDLG 299
>gi|300868839|ref|ZP_07113446.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
gi|300333190|emb|CBN58638.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
Length = 334
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 120/222 (54%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + +G Y AI+ F+Q+L +P + RG + ++ + AI+D ++A+ +P
Sbjct: 9 RGLNKAKKGYYEDAIADFNQVLAINPSDAKTYNNRGLVYYYLKDYQKAITDLSQALDISP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG A LGE+ +AI+DL++ALE P S I + RG+V +++AA+ D
Sbjct: 69 DLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVLANLGEYDAAIHDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ N Y G A +G+ +KA + + +QL+ +++ + + Y L +
Sbjct: 129 DRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ KA++ + L +D A++ RG + + L + K AI+D
Sbjct: 189 NLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDF 230
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG +A + E AI+DF + + NPS + + RG L + +AI DLS+AL+
Sbjct: 6 LYKRGLNKAKKGYYEDAIADFNQVLAINPSDAKTYNNRGLVYYYLKDYQKAITDLSQALD 65
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ + RG + A+EDL+ ++ + ++ + Y GL L+++GEY A
Sbjct: 66 ISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVLANLGEYDAAI 125
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ +AI ++ + + + + + Y L + +KA++ Q L ++ + K Y RGL H
Sbjct: 126 HDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHH 185
Query: 598 LGQHKKAIKDLS 609
LG + KAI D +
Sbjct: 186 LGDNLKAIDDYN 197
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Y AI+ Q L P EA + RG A E + AI D A++SN
Sbjct: 42 NRGLVYYYLKDYQKAITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESN 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG A LGE AI D +A+ P++ + RG + D A++D
Sbjct: 102 PQSDAIYNNRGLVLANLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ Y GL+ +G+ KA + + +A++LD + A+ + L
Sbjct: 162 FNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLL 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+E + L +D + KAY RGL + LG A KD
Sbjct: 222 EMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKDF 264
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +S++ IS D L+RG A + G+ AI ++ L+ +P RG
Sbjct: 56 AITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVL 115
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A E +AAI D+ AI NPS + + RG+A LG+ +AI D ++ L+ P
Sbjct: 116 ANLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKG 175
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+ D A++D + +KLD N A+ G + E K A E KA+Q
Sbjct: 176 YINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQ 235
Query: 546 LDRNFLEAW 554
LD +++A+
Sbjct: 236 LDPTYVKAY 244
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G AI F+Q L+ +P Y + I RG + + AI D+ EA++ +
Sbjct: 144 NRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLD 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R L E AI+D KAL+ +P RG+ +K D A +D
Sbjct: 204 PTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKD 263
Query: 506 LSACVKLDKE 515
+ ++ E
Sbjct: 264 FYHVMCINSE 273
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG++ + G AI +++ LK DP A RG R E++ AI DF +A+Q
Sbjct: 177 INRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG AR LG++ A +D +
Sbjct: 237 DPTYVKAYLNRGLARYKLGDAPGANKDFYHVM 268
>gi|194042608|ref|XP_001926697.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Sus
scrofa]
Length = 858
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 140 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDVKNAELA 199
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 200 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 258
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 259 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 318
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 319 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNF 372
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 233 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 292
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 293 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 352
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 353 QLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 410
>gi|440909805|gb|ELR59678.1| Tetratricopeptide repeat protein 13, partial [Bos grunniens mutus]
Length = 770
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 52 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 112 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 171 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 230
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G +A+K+
Sbjct: 231 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNF 284
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 628
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D + RG + KY AI +++ +K DP RG +++
Sbjct: 120 KAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAY 179
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+I D+ +AI+ +P+ + RG A L + EAI D +KA++ PN+A + RG
Sbjct: 180 NKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGF 239
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K K + A+ D +KLD N S + G+A +++GEY KA E + KAI+L+ N+
Sbjct: 240 TYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYT 299
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
A+ + + +L E+A+ + + +D + A R L L +K
Sbjct: 300 FAYNNKGITFDNLGEFEEAIMNYNKAIELDPSYKSAIENRNFSLKELENFRK 351
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 115/225 (51%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ +R + KY AI +D+ +K +P RG + + AI D+ +AI
Sbjct: 63 YYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAI 122
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P+ + +RG + AL + +AI+D +KA++ +PN+A RG + + K +N +
Sbjct: 123 KLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKS 182
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + +KLD N Y GLA + +YK+A + KAI+L+ N + Y
Sbjct: 183 IEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYN 242
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L ++A+ + + +D + ++ RG+ + LG++ KA++D
Sbjct: 243 KLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALED 287
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY+ AI +D+ +K DP RG + + + AI D+ +AI+ +
Sbjct: 100 NRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLD 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG ++I+D +KA++ +PN+A RG+ K K + A+ D
Sbjct: 160 PNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAIND 219
Query: 506 LSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +KL+ N + Y Y G + + +YK+A + KAI+LD N + + Y +L
Sbjct: 220 YNKAIKLNPNN-AFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNL 278
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
KALE + + ++ ++ AY+ +G+ LG+ ++AI
Sbjct: 279 GEYSKALEDYDKAIKLNPNYTFAYNNKGITFDNLGEFEEAI 319
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ KY AI+ +++ ++ + R + + + AI D+ +AI+ N
Sbjct: 32 NRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + AL + EAI+D KA++ +PN+A ++RG + ++ A+ED
Sbjct: 92 PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KLD N + ++ G Y K+ E + KAI+LD N + + Y+ L
Sbjct: 152 YNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLK 211
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ + + ++ + + RG + L ++K+AI D
Sbjct: 212 KYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAIND 253
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG + ++ E AI+D+ AI+ N + + R + + +AI+D KA++
Sbjct: 32 NRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN A + RG F ++ A+ED +KLD N S Y G + ++ +Y KA E
Sbjct: 92 PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151
Query: 540 HLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+LD N + + G + +Y+ N K++E + + +D + Y RGL
Sbjct: 152 YNKAIKLDPNNAAYFSSRGDI-YYYEKAYN--KSIEDYNKAIKLDPNNAFYYDNRGLAYE 208
Query: 597 GLGQHKKAIKDLSSG 611
L ++K+AI D +
Sbjct: 209 KLKKYKEAINDYNKA 223
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RG+A KY AI+ +++ +K +P RG ++
Sbjct: 187 NKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKK 246
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ +P+ + RG A LGE +A++D KA++ PN + +G
Sbjct: 247 YKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAYNNKG 306
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK--------------- 535
I +F A+ + + ++LD KSA +L + ++K
Sbjct: 307 ITFDNLGEFEEAIMNYNKAIELDPSYKSAIENRNFSLKELENFRKNNQKSRNNSKIDEIS 366
Query: 536 ----------AEEAHLKAIQLDRNFLEAWGHLTQF---YQDLANSEKALECL 574
A+ HL+ ++D NF +A + F YQ+L N +ALE L
Sbjct: 367 EAQYQTDFNNAKALHLQG-EIDDNFKKAEKEFSSFINNYQNLPNKPRALENL 417
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 35/155 (22%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSLL 63
S Y LNK K I + ++ +++D A+ ++R E A S+ +++KAI+ LD
Sbjct: 138 SYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIK-LDPNN 196
Query: 64 AQSYE---------------IQDI--------------CNRAFCYSQLELHKHVIRDCDK 94
A Y+ I D NR F Y++L+ +K I D DK
Sbjct: 197 AFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDK 256
Query: 95 ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
A++LDP + +G A++ LG +AL ++K
Sbjct: 257 AIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKA 291
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
S + L K + I + + + ++ AS R + CS + + KAI D + +
Sbjct: 36 SYFLLKKYEEAINDYNRAIELNLNNASYYYNRA-CSYYCSNK-YDKAIEDYDKAIKLN-- 91
Query: 69 IQDIC---NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
D C NR Y L + I D DKA++LDP Y +G ++ AL + ++A+
Sbjct: 92 PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151
Query: 126 WEKG 129
+ K
Sbjct: 152 YNKA 155
>gi|344278513|ref|XP_003411038.1| PREDICTED: tetratricopeptide repeat protein 13-like [Loxodonta
africana]
Length = 869
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + + P
Sbjct: 163 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVVTLEP 222
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 223 DRPEVFEQRAEILSPLGRINEAVSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 281
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 282 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 341
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 342 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 383
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 244 AVSDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 303
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 304 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 363
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 364 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 421
>gi|329663548|ref|NP_001192789.1| tetratricopeptide repeat protein 13 precursor [Bos taurus]
gi|296472256|tpg|DAA14371.1| TPA: tetratricopeptide repeat domain 13 isoform 1 [Bos taurus]
Length = 858
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 140 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 199
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 200 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 258
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 259 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 318
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G +A+K+
Sbjct: 319 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNF 372
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 233 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 292
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 293 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 352
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 353 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 410
>gi|291402198|ref|XP_002717429.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1
[Oryctolagus cuniculus]
Length = 865
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 147 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 206
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 207 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 265
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L++ A Y GL G K+A E+ +A++ +F++A+
Sbjct: 266 ISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 325
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 326 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 379
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 240 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFF 299
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 300 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 359
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 360 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 417
>gi|426255520|ref|XP_004021396.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Ovis
aries]
Length = 859
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 141 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 200
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 201 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 259
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 260 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 319
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G +A+K+
Sbjct: 320 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNF 373
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 234 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 293
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 294 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 353
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 354 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 411
>gi|414078463|ref|YP_006997781.1| hypothetical protein ANA_C13292 [Anabaena sp. 90]
gi|413971879|gb|AFW95968.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1150
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G AI ++Q ++ +P Y A RG R + + AI D+T AI+ N
Sbjct: 734 NRGIVRNELGDKPGAIDDYNQAIRINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKIN 793
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A++F PN A + RGIV D A++D
Sbjct: 794 PNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDD 853
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + AY G+ +G+ A + + +AI+ + N A+ DL
Sbjct: 854 YNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 913
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ Q + + + AY+ RG + + LG + AI D +
Sbjct: 914 DKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYT 957
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI + +K +P Y A RG R + AI D+ AI+ N
Sbjct: 768 NRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFN 827
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG R LG+ AI D ++A++F PN A + RGIV ++ D A++D
Sbjct: 828 PNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDD 887
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + +AY G + +G+ + A + + +AI+ + N A+ DL
Sbjct: 888 YTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 947
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ Q + + + AY+ RG + + LG + AI D +
Sbjct: 948 DKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYT 991
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F ++GI + G AI + Q +K +P Y +A RG R + AI D+ +AI
Sbjct: 697 FYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAI 756
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG R LG+ AI D + A++ PN A+ + RGIV ++ D A
Sbjct: 757 RINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGA 816
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D + +K + AY G+ +G+ A + + +AI+ + N +A+ +
Sbjct: 817 IDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRY 876
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + A++ Q + + + AY+ RG + + LG + AI D +
Sbjct: 877 ELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYT 923
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G AI ++ +K +P Y +A RG R + AI D+ +AI+ N
Sbjct: 802 NRGIVRYELGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFN 861
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG R LG+ AI D ++A++F PN A+ + RG V D A++D
Sbjct: 862 PNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDD 921
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + +AY G + +G+ + A + + +AI+ + N A+ + +L
Sbjct: 922 YTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELG 981
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ + + ++ AY+ RG++ + LG + AI D +
Sbjct: 982 DKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDDYT 1024
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + + G AI + Q +K +P A GRG+ R + + AI D+T+AI+ N
Sbjct: 904 GRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFN 963
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A+++ PN A + RGIV + D A++D
Sbjct: 964 PNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDD 1022
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + N +AY G+ + +G+ + A + + AI+++ N+ +A+ + +L
Sbjct: 1023 YTLAIKYN-PNYAAYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELG 1081
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A++ + + +++AY RG + + LG A +DL
Sbjct: 1082 DKQGAIDDYTLAIKYNPNYAQAYVRRGSVRYQLGDKPGAKEDL 1124
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 117/235 (49%), Gaps = 2/235 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K I + + +G+A + GKY AI+ Q +K P + A + +L+ A
Sbjct: 589 KPKFIHLAY-YGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDYLSSVYRESNQLDKA 647
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++ +AIQ P+ + ++ + L + EA ++KA+E P +A + +GIV +
Sbjct: 648 LAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEAAAAINKAIELSPRAA-FYYNQGIVRY 706
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A++D + +K++ AY G+ + +G+ A + + +AI+++ N+ A+
Sbjct: 707 ELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAIRINPNYALAY 766
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L + + A++ + I+ ++ AY+ RG++ + LG AI D +
Sbjct: 767 YNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYN 821
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + + G AI + Q +K +P A RG R + + AI D+T AI+ N
Sbjct: 938 GRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYN 997
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A+++ PN A + RGIV + D A++D
Sbjct: 998 PNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDD 1055
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G + +G+ + A + + AI+ + N+ +A+ L
Sbjct: 1056 YTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYAQAYVRRGSVRYQLG 1115
Query: 566 NSEKALECLQQV--LYIDKRFSKAYH 589
+ A E LQ+ L+ D+ + AY
Sbjct: 1116 DKPGAKEDLQRAAQLFKDQGNTAAYE 1141
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI + +K +P Y A RG R + + AI D+T AI+ N
Sbjct: 972 NRGFVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELGDKQGAIDDYTLAIKYN 1030
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A++ PN AD + RG V + D A++D
Sbjct: 1031 PNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDD 1089
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQD 563
+ +K + AY G +G+ A+E +A QL D+ A+ F ++
Sbjct: 1090 YTLAIKYNPNYAQAYVRRGSVRYQLGDKPGAKEDLQRAAQLFKDQGNTAAYEQTMAFLKE 1149
Query: 564 L 564
L
Sbjct: 1150 L 1150
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 38/220 (17%)
Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI FD + + P + A G+G A + AI+ +A++S P AW
Sbjct: 574 RYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDY 633
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-RGIVNFKFKDFNAAVEDLSACVKLD 513
+ +A+ +++A++ +PN+ ++ ++ RG+
Sbjct: 634 LSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGV---------------------- 671
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
LS + +YK+A A KAI+L + Y+ L + A++
Sbjct: 672 -------------LSDLKKYKEAAAAINKAIELSPRAAFYYNQGIVRYE-LGDKPGAIDD 717
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + I+ ++KAY+ RG++ + LG AI D + R
Sbjct: 718 YTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAIR 757
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACV-KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
ERG ++ + + A++ A + + K AY GLAL S G+Y +A A +A++
Sbjct: 564 ERGNQLWRLRRYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKS 623
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+F+ AW +L+ Y++ +KAL + Q + + Y+ + +L L ++K+A
Sbjct: 624 QPDFVPAWDYLSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEA 681
>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
Length = 774
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI + Q ++ DP +A RG A + +A+ DFT+ I+ NP+ EA+ +
Sbjct: 434 GAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQ 493
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R LG+ AI+D ++A+ PN A RG+ D A+ D + ++L+
Sbjct: 494 RALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNP 553
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ S Y G A ++ +YK A E + +AI LD N +A+ + Y +LA +KA+E
Sbjct: 554 KQASVYYSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDC 613
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + +D + ++AY+ R + LG ++KA +D S
Sbjct: 614 TQAIALDPKNAEAYNNRCIARLNLGDYQKASEDCS 648
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + SA+ F Q+++ +P EA R + + AI D+T+AI+ N
Sbjct: 459 NRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLN 518
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+A G+ A+ D ++A+E P A + + RG F D+ A+ED
Sbjct: 519 PNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMED 578
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + LD AYT A ++ Y KA E +AI LD EA+ + +L
Sbjct: 579 YSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIARLNLG 638
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +KA E + I KA+ RGL +G + AI+D S R
Sbjct: 639 DYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIR 686
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 13/266 (4%)
Query: 361 EAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGKYASAISIFDQI 407
+A N+ T I +S DF RL+ R + G Y +AI + Q
Sbjct: 455 KAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQA 514
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P ++ RG AR+ + + A+SDFT+AI+ NP + RG+AR L +
Sbjct: 515 IRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKG 574
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++D S+A+ +PN AD R ++ A+ED + + LD +N AY +A
Sbjct: 575 AMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIAR 634
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++G+Y+KA E I + N +A+ + + + + A+E Q + ++ + A
Sbjct: 635 LNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVA 694
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSR 613
Y RG++ + + AI+D + R
Sbjct: 695 YSNRGIVYSEIKNYGSAIEDFAQSIR 720
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 101/201 (50%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
++ P + R +A Q + AI+D+T+AI N EA+ +R LG +A
Sbjct: 380 RQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQA 439
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
IQD ++A++ +PN+ + RG+ +D +AV+D + ++L+ + AY L
Sbjct: 440 IQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYY 499
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+YK A E + +AI+L+ N +++ + + + A+ Q + ++ + + Y
Sbjct: 500 ELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVY 559
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
+ RG L +K A++D S
Sbjct: 560 YSRGRARFNLADYKGAMEDYS 580
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A+S F Q ++ +P RG AR + + A+ D+++AI +
Sbjct: 527 NRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMEDYSQAIVLD 586
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ R A L +AI+D ++A+ +P +A+ + R I D+ A ED
Sbjct: 587 PNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIARLNLGDYQKASED 646
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + + N A++ GLA S+IG+ + A E +AI+L+ + A+ + Y ++
Sbjct: 647 CSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNRGIVYSEIK 706
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
N A+E Q + + + AY+ RG++
Sbjct: 707 NYGSAIEDFAQSIRLSPNNATAYYSRGII 735
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 37/201 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ N Y A+ + Q + DP +A R +A + AI D T+AI +
Sbjct: 561 SRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALD 620
Query: 446 PSAGEAWKRR----------------------------------GQARAALGESVEAIQD 471
P EA+ R G AR+A+G+ AI+D
Sbjct: 621 PKNAEAYNNRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIED 680
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
S+A+ P+ A RGIV + K++ +A+ED + ++L N +AY G+ +
Sbjct: 681 FSQAIRLNPSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELK 740
Query: 532 EYKKAEEAHLKAIQLDRNFLE 552
+ A E KA L FLE
Sbjct: 741 DRLGANEDFQKAATL---FLE 758
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA++N G Y A + P+A RG AR+ + + AI DF++AI+ N
Sbjct: 629 NRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLN 688
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG + + AI+D ++++ PN+A + RGI+ + KD A ED
Sbjct: 689 PSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELKDRLGANED 748
Query: 506 LSACVKLDKENKSAYTY 522
L E A Y
Sbjct: 749 FQKAATLFLEQGRADAY 765
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P A +ER + K D A+ D + + L+ + AY +G Y++A +
Sbjct: 383 PARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQD 442
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AIQ+D N ++A+ + Y D+ + A++ QV+ ++ ++AY+ R L + LG
Sbjct: 443 YTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELG 502
Query: 600 QHKKAIKDLSSGSR 613
+K AI+D + R
Sbjct: 503 DYKTAIEDYTQAIR 516
>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
[Acaryochloris marina MBIC11017]
gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
marina MBIC11017]
Length = 699
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V L +G + +G Y A+ + +++DP EA G + +L+ AI+ +T
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTT 470
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ P++ +A+ RG R+ LG+ + AI D ++A+ P + RG + +
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D S V++D + AY G+ S +G K A + + I+L+ N+ +A+ +
Sbjct: 531 AAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIA 590
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y +L N +KA+ Q + +D ++++AY RG LG + AI D +
Sbjct: 591 YVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYT 639
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI+ + ++ P +A RG R+ + AAI+DFTEAI+ NP +A+ RG
Sbjct: 463 GAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTI 522
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ +G+ AI D S+A++ + + RGIV + AA+ D S ++L+
Sbjct: 523 YSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQ 582
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A ++G KKA + +AI++D + A+ + L N + A+ Q +
Sbjct: 583 AYNNRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAI 642
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID ++KAY RG + LG+ ++AI+DL
Sbjct: 643 DIDSTYAKAYENRGTVKGQLGKKQEAIQDL 672
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 4/287 (1%)
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--R 387
++S+ K +S+ R F + + +++ + +K R+S+ S F L+
Sbjct: 326 EASLPPTKVVESSVDRRSKPFIFYLAPQSNTTSL--QKDSSPRMSRKVVGSALFTLTLLG 383
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI V SA+S + E + + +G + Q + + A+ ++ AIQ +P
Sbjct: 384 GIGYVVAQGLQSAVSPKAITVAEVNRQVQGHLQQGDQKFAQGDYQRALREYAAAIQKDPE 443
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G + L + AI + A+ +P S D + RG+V + D AA+ D +
Sbjct: 444 NAEAHFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFT 503
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ ++ AY G S +G+ + A + +A+Q+D + EA+ + DL N+
Sbjct: 504 EAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNT 563
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ A+ QV+ ++ +++AY+ RG+ LG KKAI D + R
Sbjct: 564 KAAISDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRV 610
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K SVD +RG+ + G +AI+ F + ++ +P + +A RGT + + +AAI+
Sbjct: 475 KPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIA 534
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+++A+Q + EA+ RG ++ LG + AI D S+ + N A + RGI
Sbjct: 535 DYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNL 594
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+ D + +++D + AYT G A ++G + A + +AI +D + +A+ +
Sbjct: 595 GNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYEN 654
Query: 557 LTQFYQDLANSEKALECLQQ 576
L ++A++ LQ+
Sbjct: 655 RGTVKGQLGKKQEAIQDLQK 674
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 296 RHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDML 355
+ G Q D L +A++ N+E++ S I+ + +D + + + L
Sbjct: 416 QQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTTAI-RL 474
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGKYASAIS 402
K TS +A N+ + + + DF RL+ RG GK +AI+
Sbjct: 475 KPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIA 534
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ Q ++ D Y EA RG ++ +AAISD+++ I+ N + +A+ RG A L
Sbjct: 535 DYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNL 594
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G +AI D ++A+ +P A RG + AA+ D + + +D AY
Sbjct: 595 GNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYEN 654
Query: 523 LGLALSSIGEYKKA 536
G +G+ ++A
Sbjct: 655 RGTVKGQLGKKQEA 668
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQSY 67
+ K I + + V++D+ A R I + L ++ ++S+ IR L+S AQ+Y
Sbjct: 526 VGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIR-LNSNYAQAY 584
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL---- 123
NR Y L K I D +A+++DP +AY +G A ALG K+ A+
Sbjct: 585 N-----NRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYT 639
Query: 124 ------SVWEKGYEH 132
S + K YE+
Sbjct: 640 QAIDIDSTYAKAYEN 654
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
++ RLN I +R+ A R EL KL ++ ++++AIR+
Sbjct: 454 TKRRLNDLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRL----- 508
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+Q NR YS++ + I D +A+Q+D +AY +G S LG + A+
Sbjct: 509 -NPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 124 SVWEK 128
S + +
Sbjct: 568 SDYSQ 572
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLR----NWSKAIRILDSLLAQSY 67
L T I + +++R++S A A R I L +L+ ++++AIR+ D A++Y
Sbjct: 560 LGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRV-DPKYARAY 618
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L + I D +A+ +D T +AY +G LG+K+EA+ +
Sbjct: 619 -----TNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673
Query: 128 K 128
K
Sbjct: 674 K 674
>gi|338717240|ref|XP_001916733.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
[Equus caballus]
Length = 854
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + + A
Sbjct: 136 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNADLA 195
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 196 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 254
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 255 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 314
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 315 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 368
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 229 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 288
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 289 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 348
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 349 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 406
>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 605
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 387 RGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RGI E K Y AI+ F+ ++ +P Y +A RG AR + AAI+D+ +A+Q N
Sbjct: 42 RGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRGNARYCLADFTAAIADYDQALQIN 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFK 497
P+ E + RG A A G+ +AI + +EF+P + A+ + RG+ N
Sbjct: 102 PTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHG 161
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ A+ DL ++ +AY+ G +GEY++A H +A+QLD N EA+ +
Sbjct: 162 NYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNR 221
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----LSSGSR 613
Y L +KA+ + L I+ AY+ RGL+ L ++++A D LS S+
Sbjct: 222 GNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSK 281
Query: 614 TMMPHLIWNLTRWRNLCFNAW 634
+ R L + AW
Sbjct: 282 DAQAYY------QRGLIYEAW 296
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ G Y AI+ ++Q L+ +P EA GR A ++L AI+D+T +I+ +P
Sbjct: 357 RGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISP 416
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR LG++ A+ D ++AL ++ + RG +++ +++ +A+ D
Sbjct: 417 DFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADY 476
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L E+ Y+ A ++ +Y+ A + ++I ++ + E W + + Y L
Sbjct: 477 TQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGY 536
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL L Q L ++ AY LR +L G ++ AI D
Sbjct: 537 LEEALADLNQALKFQPHWASAYLLRADILRNRGDYQAAITDF 578
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI Q L+ P + A RG E AI+D A+Q +P
Sbjct: 153 RGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ RG A ALG +AI D ++ LE P+ + RG+++F ++ A D
Sbjct: 213 NLAEAYQNRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + ++ AY GL + +Y+ A + +A+QL+ +G ++ L +
Sbjct: 273 NQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL ++L + F+ Y RG LG ++ AI D +
Sbjct: 333 YPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYN 375
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 107/224 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A + F+Q+L + +A RG ++ ++A++D+ +A+Q N
Sbjct: 254 NRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQALQLN 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + R LG+ A+ D ++ L+ +PN A +RG D+ A+ D
Sbjct: 314 PELAVVYGVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITD 373
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A ++ + A + +I++ +F A+ + + L
Sbjct: 374 YNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLG 433
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+++ AL Q L I+ + S+AY+ RG L + ++ AI D +
Sbjct: 434 DTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYT 477
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y AI+ ++ ++ DP EA RG A + AI+D+ ++ NP
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG L E +A D ++ L F A ++RG++ ++D+ +A+ D
Sbjct: 247 HQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADY 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ E Y +G+Y A + +QL NF + + L +
Sbjct: 307 NQALQLNPELAVVYGVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGD 366
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
A+ Q L I+ ++AY+ R + L AI D + R
Sbjct: 367 YRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIR 413
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++++++ +LS RG ++ Y SAI+ + Q L+ P R AR ++
Sbjct: 443 NQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQD 502
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SA 483
+ A++D+T++I NP E W RG++ LG EA+ DL++AL+F+P+ A
Sbjct: 503 YQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRA 562
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKL 512
DIL RG D+ AA+ D L
Sbjct: 563 DILRNRG-------DYQAAITDFQKSADL 584
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ +++ L+ +P A RG + E + A +DF + + N
Sbjct: 220 NRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFN 279
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ +RG A + A+ D ++AL+ P A + R ++ D+ +A+ D
Sbjct: 280 SKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGDYPSALAD 339
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + Y G + +G+Y+ A + +A+Q++ N EA+ ++ L
Sbjct: 340 GNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQ 399
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + I F+ AY RG LG K A+ D +
Sbjct: 400 DLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYN 443
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ ++EA ++ + + S IS DF +RG A+ G A++ ++Q L +
Sbjct: 391 RAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT 450
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG+ Q+ +AI+D+T+A++ P + + R AR AL + A+ D
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++++ P A+ + RG A+ DL+ +K SAY L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILRNRGD 570
Query: 533 YKKA 536
Y+ A
Sbjct: 571 YQAA 574
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
R Y +L ++ I D ++A+QLDP L +AY +G A+ ALG ++A++ + + E
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINP 246
Query: 135 HQ 136
HQ
Sbjct: 247 HQ 248
>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
9303]
gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
9303]
Length = 462
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%), Gaps = 6/254 (2%)
Query: 362 AKRNKKFCVTRISK-SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
AKR C I+ +KSI + D +RG A+ G Y AI+ +++ ++ +P Y
Sbjct: 122 AKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYA 181
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A RG A+ ++ + AI DF +AI+ NP A+ RG A+ L + AI D +KA
Sbjct: 182 DAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKA 241
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E P A + RG + KD+ A+ D + ++++ + +AY G+ G+ ++
Sbjct: 242 IEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQE 301
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI+++ A+ + ++ ++++A+ + + I+ ++ AY+ RG+
Sbjct: 302 AIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAAAYNNRGIAK 361
Query: 596 HGLGQHKKAIKDLS 609
LG +++AI D +
Sbjct: 362 KNLGNYQEAIADYN 375
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 120/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G Y AI+ +++ ++ +P Y +A RG A+ + + AI+D+ ++I+ N
Sbjct: 84 NRGLAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEIN 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A+ G+ AI D +K++E P AD + RG +K KD A++D
Sbjct: 144 PQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDD 203
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY+ G A + +Y+ A KAI++ A+ + +L
Sbjct: 204 FNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELK 263
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ + + I+ +++ AY+ RG++ G ++AI D +
Sbjct: 264 DYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFN 307
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 14/288 (4%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS- 386
Y+KS + + +D+ +R + +K LK+T + +K+ I+ ++
Sbjct: 170 YNKSIEVNPQYADAYNNRGRAKYK---LKDTQG--------AIDDFNKAIEINPQLAIAY 218
Query: 387 --RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A+ Y AIS F++ ++ P A RG A+ ++ + AISDF +AI+
Sbjct: 219 SNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEI 278
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + G++ EAI D +KA+E P A RGIV + D A+
Sbjct: 279 NPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIA 338
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ E +AY G+A ++G Y++A + KAI+++ + A+ + L
Sbjct: 339 DFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKL 398
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+++ A+ L + + I+ +++ AY RG++ +G K A D S
Sbjct: 399 KDTQGAIAELNKAIEINPQYAAAYKTRGIVKELVGDLKGACADWKEAS 446
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 120/229 (52%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A+ G AI+ +++ ++ +P Y +A RG A+ + + AI+D+ +
Sbjct: 113 ADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNK 172
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+I+ NP +A+ RG+A+ L ++ AI D +KA+E P A RG + KD+
Sbjct: 173 SIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQ 232
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + +++ ++ +AY G A + +Y+ A KAI+++ + A+ +
Sbjct: 233 GAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIV 292
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ ++++A+ + + I+ + + AY RG++ G ++AI D +
Sbjct: 293 KRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFN 341
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ + Y AI + + + +P Y A RG A+ + + AI+D+ +AI+
Sbjct: 49 YNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLAKRKSGDYQGAIADYNKAIEI 108
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RG A+ G+ AI D +K++E P AD + RG K D+ A+
Sbjct: 109 NPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIA 168
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + AY G A + + + A + KAI+++ A+ + +L
Sbjct: 169 DYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDEL 228
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ + + I + + AY+ RG L ++ AI D +
Sbjct: 229 KDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFN 273
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+ I+ ++++ +P A RG A+ ++ + AI D+ +AI NP A+ RG A
Sbjct: 29 TTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLA 88
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ G+ AI D +KA+E P AD + RG K D A+ D + ++++ +
Sbjct: 89 KRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYAD 148
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G A G+Y+ A + K+I+++ + +A+ + + L +++ A++ + +
Sbjct: 149 AYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAI 208
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
I+ + + AY RG L ++ AI D +
Sbjct: 209 EINPQLAIAYSNRGNAKDELKDYQGAISDFN 239
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 89/179 (49%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ I++ T+ I++NP A+ RG A+ L + AI D +KA++ P + RG
Sbjct: 27 VQTTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRG 86
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D+ A+ D + ++++ + AY G A G+ + A + K+I+++ +
Sbjct: 87 LAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQY 146
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + + + + A+ + + ++ +++ AY+ RG + L + AI D +
Sbjct: 147 ADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFN 205
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELAKL-CSLRNWSKAIRILDSLL 63
++Y+L T I + ++ + ++ +A A + A+ EL ++ +++KAI I+
Sbjct: 190 AKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDA 249
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A Y NR +L+ ++ I D +KA++++P AY +G G +EA+
Sbjct: 250 AAYY------NRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAI 303
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
AD + +E+ L A +R +
Sbjct: 304 --------------ADFNKAIEINPQLAIAYSNRGIV 326
>gi|445062480|ref|ZP_21374862.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
gi|444506126|gb|ELV06506.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
Length = 365
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 18/254 (7%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A+ N +Y AI +D ++ P RG A+ E E AI D++ +I+ P
Sbjct: 84 GVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKCQLGEYEEAIEDYSRSIELKPK 143
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ L + EAI+D K++E +P +RG V + K +N A+EDL+
Sbjct: 144 NADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLN 203
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
+KL+ + Y GL S +GE ++A + + KAI+L+ +F+EA+ + +Q+ L
Sbjct: 204 KAIKLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQY--KLK 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
N +A++ + + ++ + Y+ RG + + L ++ AI+D + S + P
Sbjct: 262 NYNEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNK-SIEINP-------- 312
Query: 626 WRNLCFNAWPFIRR 639
F A P++RR
Sbjct: 313 -----FYAKPYLRR 321
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 107/213 (50%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K + D+ RG+A+ KY AI FD+ ++ P P RG + ++ AI
Sbjct: 141 KPKNADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIE 200
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D +AI+ NP + + RG ++ LGE+ EAI+D +KA+E + + R +K
Sbjct: 201 DLNKAIKLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKL 260
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
K++N A++D + ++L+ + Y + G + + +Y+ A E K+I+++ + + +
Sbjct: 261 KNYNEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLR 320
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+L + ALE + + +D +++AY
Sbjct: 321 RGDVKYNLGQYKDALEDYNKCIELDDSYTEAYE 353
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E EA ++ C+ R+ K+ + +RG A+ G+Y AI + + ++ P +
Sbjct: 91 EEYEEAIKDYDICIERLPKADYVYC----NRGDAKCQLGEYEEAIEDYSRSIELKPKNAD 146
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
RG A+ ++ E AI DF ++I+ P + RG + AL + EAI+DL+KA+
Sbjct: 147 YYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLNKAI 206
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ P AD + RG+V + A++D + ++L+ AY + + Y +A
Sbjct: 207 KLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKLKNYNEA 266
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ K+I+L+ + L + + A+E + + I+ ++K Y RG + +
Sbjct: 267 IKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLRRGDVKY 326
Query: 597 GLGQHKKAIKDLS 609
LGQ+K A++D +
Sbjct: 327 NLGQYKDALEDYN 339
>gi|440680703|ref|YP_007155498.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677822|gb|AFZ56588.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 233
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
IFD I P + RG + Q + AI DF++AI +NP+ ++ RG A AAL
Sbjct: 4 IFDMIFGTSPSWR-----RGDQKLKQGDYTGAIKDFSQAIATNPNDSFSYCHRGSAYAAL 58
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ +AI+D ++A+ P+ + RGI D +ED + +D + Y
Sbjct: 59 GDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRY 118
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG+A I +Y A +AIQ+D + A+ + Y L +AL+ L I
Sbjct: 119 LGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYP 178
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDL 608
++S+AY RG+L +G+ AI+DL
Sbjct: 179 QYSEAYKFRGMLYIEIGETSSAIEDL 204
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ +G Y AI F Q + +P + RG+A A + + AI D+T+AI+ +P
Sbjct: 17 RGDQKLKQGDYTGAIKDFSQAIATNPNDSFSYCHRGSAYAALGDHKKAIEDYTQAIRLSP 76
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + RG + A+G+ I+D + + + + GI K ++ AV L
Sbjct: 77 SEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRYLGIAYIKINKYDYAVRCL 136
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++D + SAY Y GLA + + +Y +A + A+++ + EA+ Y ++
Sbjct: 137 TRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQYSEAYKFRGMLYIEIGE 196
Query: 567 SEKALECLQQV 577
+ A+E L++
Sbjct: 197 TSSAIEDLKKA 207
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA + KY A+ + ++ D YP A RG A ++ A+ DF A++ P
Sbjct: 120 GIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQ 179
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
EA+K RG +GE+ AI+DL KA N ++L ++ +++
Sbjct: 180 YSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFNQNNMLEQQNVLS 225
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RGI+ G I + +++ D P+ G A + + A+ T AI
Sbjct: 81 FYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRYLGIAYIKINKYDYAVRCLTRAI 140
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q + A+ RG A L + EA++D ALE P ++ RG++ + + ++A
Sbjct: 141 QIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQYSEAYKFRGMLYIEIGETSSA 200
Query: 503 VEDLSACVKL 512
+EDL L
Sbjct: 201 IEDLKKAAGL 210
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G + AI + Q ++ P P RG + ++E I D+ I +
Sbjct: 51 RGSAYAALGDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDS 110
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + + G A + + A++ L++A++ + RG+ K + A++D
Sbjct: 111 SIPQGHRYLGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDF 170
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+++ + AY + G+ IGE A E KA L N
Sbjct: 171 DHALEIYPQYSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFN 213
>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 784
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 118/227 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ +Y AI+ +DQ L+ DP Y I RG A + E AI+DF +A++ +P
Sbjct: 202 RGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A + GE+ AI D +AL F P A RG +++ A+ D
Sbjct: 262 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 321
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++LD ++ +AY GLA + GEY +A + +A++LD A+ + +
Sbjct: 322 DHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 381
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ + L +D + + AY+ RG L+ G++ +AI DL R
Sbjct: 382 HDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALR 428
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 116/228 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ +P Y A RG A + E + AI+D+ A++ N
Sbjct: 133 NRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL F+P A+I RG ++N A+ D
Sbjct: 193 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AYT G A S GE +A + +A++ + + A+ + +++
Sbjct: 253 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ L +D + + AY+ RGL G++ +AI D R
Sbjct: 313 EYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALR 360
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A ++G+ AI+ +DQ L+ +P Y A RG A + E + AI+D+ A++ +
Sbjct: 269 GRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A RG ++ + + A+ D
Sbjct: 329 PKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G AL+ GEY +A +A++L F + H ++
Sbjct: 389 YDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKG 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
+ ++AL L + + ++ +++ AY RG+ G+ +A+ DL+ R + P L + T
Sbjct: 449 DLDRALAELNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVR-LKPELEADAT 506
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP Y I RG A + E + AI+D+ +A++ +
Sbjct: 66 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A + GE AI D +AL F P A RG +++ A+ D
Sbjct: 126 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADY 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E+ +AYT+ GLA S EY +A + +A++ D + + + ++
Sbjct: 186 DHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGE 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+A+ Q L +D + AY RG G++ +AI D R
Sbjct: 246 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALR 292
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A +G+Y AI+ +DQ L+ D RG A + E + AI+D+ +A++
Sbjct: 98 INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 157
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG A + GE AI D AL P A RG+ +++ A+
Sbjct: 158 NPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 217
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ D + + Y G A S GEY +A +A++LD + A+ ++
Sbjct: 218 DYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 277
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+++A+ Q L + +++ AY RG G++ +AI D R
Sbjct: 278 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALR 326
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +
Sbjct: 31 NRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A GE AI D +AL + A + RG +++ A+ D
Sbjct: 91 PKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + AY G A S GEY +A + A++L+ A+ H +Q +
Sbjct: 151 YDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKS 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L D +++ Y RG G++ +AI D R
Sbjct: 211 EYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALR 258
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 56/520 (10%)
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A + + D NR + + I D D+AL+LDP AY +G AF
Sbjct: 21 AYALDATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAF---------- 70
Query: 124 SVWEKG-YEHALHQSADLKQFLELEELLTAAKQDRSVT----CEYD--VSNSMSSLTVSE 176
+ KG Y+ A+ AD Q L L+ +R + EYD +++ +L
Sbjct: 71 --YRKGEYDRAI---ADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALR--- 122
Query: 177 SGLNANDKMSETSENHNKSDICDSSSQ-SRDVSETCSKSSHDPDLC-----NGRSDEAKG 230
L+ D + T N+ D S + R +++ +P G + ++KG
Sbjct: 123 --LDLRDAVVYT----NRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKG 176
Query: 231 GSSVPVSK--SGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPI 288
++ L +N + + H G + SKS + R ++ ++ D N I
Sbjct: 177 EYDRAIADYDHALRLNPE-DAAAYTHRGLAFQSKSEY-DRAIADYDQALRFDPKYANIYI 234
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
++ G D L D S+ +++ +D +D ++ +
Sbjct: 235 NRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQA-LRF 293
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFRLS-----RGIAQVNEGKYASAIS 402
+ K+ +A RNK I+ ++ +D + + RG+A N+G+Y AI+
Sbjct: 294 NPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIA 353
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+DQ L+ DP A RG A + E + AI+D+ EA++ +P + A+ RG A
Sbjct: 354 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKK 413
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYT 521
GE AI DL +AL +P A+ RG F+ K D + A+ +L+ V+L+ + AY
Sbjct: 414 GEYDRAIADLDQALRLKPGFANPYCHRGTA-FRHKGDLDRALAELNEAVRLNPKYADAYQ 472
Query: 522 YLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEAWG 555
G+ + GE + AE LK ++ D FL+ G
Sbjct: 473 ERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRG 512
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
+ I + D +R++ A+A T R LA S + +AI D L + +I NR
Sbjct: 180 RAIADYDHALRLNPEDAAAYTHR-GLA-FQSKSEYDRAIADYDQALRFDPKYANIYINRG 237
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + + I D D+AL+LDP + AY +G AF + G + A++ +++
Sbjct: 238 YAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQ 289
>gi|428317099|ref|YP_007114981.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428240779|gb|AFZ06565.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 804
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 121/240 (50%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + S+ I +G+ + A+A+ F++ ++ +P E+ RG A
Sbjct: 401 FLFSYWSRPNPIKAKEYYEKGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYD 460
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + AI+D+++AI NP +A+ RG AR + AI+D ++AL +PN AD +
Sbjct: 461 LKKYQEAIADYSQAIALNPKYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYY 520
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
ERG+ + +D+ A++D +A ++L AY GLA + G+ + + +AI+LD
Sbjct: 521 ERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLD 580
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ + L + + AL QV+ ID + + AY R LG H+ AI D
Sbjct: 581 AKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDD 640
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+ + Y +AI F+ +++ P +A RG ARA +L+ I D+TEA
Sbjct: 517 DTYYERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEA 576
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
I+ + +A+ RG+AR LG+ A+ D S+ + +P SAD
Sbjct: 577 IKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636
Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+ R I KD+ A+ D + +K++ + +AY LA
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+ G+ + A AI + N EA+ + + YQ+L N A+ Q + I ++ A
Sbjct: 697 SAGGDAQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
Y+ RGL+ LG AI DL + +
Sbjct: 757 YYGRGLVRRSLGDKAGAISDLEKAGKMYL 785
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 5/256 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKED 411
E E RN+ + +KSI ++ + + RG A + KY AI+ + Q + +
Sbjct: 419 EKGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYDLKKYQEAIADYSQAIALN 478
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P Y +A RG AR + AI D+T+A+ P+ + + RG L + AIQD
Sbjct: 479 PKYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQDYKTAIQD 538
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + +PN H RG+ D + D + +KLD +N A+ G A +G
Sbjct: 539 FNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLDAKNVDAFYSRGRARFHLG 598
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y+ A + + I +D +A+ + +L + A++ Q + + Y+ R
Sbjct: 599 DYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNR 658
Query: 592 GLLLHGLGQHKKAIKD 607
+ L + KAI D
Sbjct: 659 CIAYLNLKDYPKAIAD 674
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD SRG A+ + G Y A++ + Q++ DP +A R + + +AAI D T
Sbjct: 583 NVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI + G + R A L + +AI D ++AL+ PN + + R + D
Sbjct: 643 QAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSAGGDA 702
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D +A + + N AY + Y A +++AI++ N+ A+
Sbjct: 703 QGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGL 762
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
+ L + A+ L++ +Y+D+ + Y
Sbjct: 763 VRRSLGDKAGAISDLEKAGKMYLDQGLTGGY 793
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A +G ++ I S P A +E+G+ + +D AA++ + ++L+ +N +
Sbjct: 391 AGVGAAIVLIFLFSYWSRPNPIKAKEYYEKGVEKSRNQDAAAALQAFNKSIQLNPKNAES 450
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ + G A + +Y++A + +AI L+ +++A+ + D + A+E Q L
Sbjct: 451 FYWRGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGLARHDFNDKRGAIEDYTQALN 510
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ + Y+ RG+ L +K AI+D ++ R + P+L+
Sbjct: 511 LQPNDADTYYERGVTYLELQDYKTAIQDFNAVIR-LQPNLV 550
>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 516
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-- 428
+KSIS++ + + RG+ G AI F + + + Y A A ++Q
Sbjct: 253 TKSISINPKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAY--HNLAFSYQQL 310
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+++ AI +T+ + NP+ +A+ RG RA LG++ AI+D +++L PN A +
Sbjct: 311 RDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNY 370
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGIV + D A+ED + + + AY+ G +G++K A E + +A++++
Sbjct: 371 RGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINP 430
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
NF A+ + YQ L +KA+E +Q + I+ F +AY+ RG + LG +AI DL
Sbjct: 431 NFYIAYCNRGTAYQYLGEFQKAIEDYEQAININCNFPEAYYNRGTIYKLLGNKVRAINDL 490
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G AI+ F++ L P A RG ARA LEAA DFT++I N
Sbjct: 200 NRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISIN 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG LG+ +AI+D KA+ N A+ H + +D A+E
Sbjct: 260 PKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEA 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V ++ + AY G+ + +G+ K A E +++ L+ N+ +++ + L
Sbjct: 320 YTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLG 379
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ E A+E + LYI F +AY RG LG K AI+D S R
Sbjct: 380 DIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALR 427
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 2/243 (0%)
Query: 369 CVTRISKSKSIS--VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
C + ++K ++ S + ++G+ G AI F+Q L Y EA RG A
Sbjct: 147 CYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYA 206
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+L+ AI+DF +++ P A+ RG ARA LG A +D +K++ P A+
Sbjct: 207 NLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISINPKFAEAY 266
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG++ K D A++D + ++ +AY L + + + K A EA+ + + +
Sbjct: 267 NNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLI 326
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ + DL +++ A+E Q L+++ ++K+++ RG++ + LG + AI+
Sbjct: 327 NPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIE 386
Query: 607 DLS 609
D +
Sbjct: 387 DFN 389
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 20/231 (8%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ G + AI ++Q ++ + +A RG A A LE AI D+ EAI N
Sbjct: 16 RGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDYDEAIYINE 75
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG RA L + EA++D ++A++ P A+ + R I D AV D
Sbjct: 76 DFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAVNDF 135
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + +K++ S Y+ H+ Q D EA+ + + + +
Sbjct: 136 NQYI-FNKDDSSCYS------------------HVNKHQNDSKLAEAFFNKGLYCAESGD 176
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
E+A++ Q L I ++++AY+ RGL+ LG K+AI D + S + P
Sbjct: 177 LEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNK-SLVLQP 226
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G AI +D+ + + + EA RG RA + A+ D+ EAI N
Sbjct: 49 NRGMAFAKLGNLEDAIEDYDEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDIN 108
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---------------ADILHERG 490
P EA+ R AR+ LG+ A+ D ++ + + +S A+ +G
Sbjct: 109 PYFAEAYYCRSIARSYLGDVEGAVNDFNQYIFNKDDSSCYSHVNKHQNDSKLAEAFFNKG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RN 549
+ + D A+++ + + + + AY GL +++G+ K+A K++ L +N
Sbjct: 169 LYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKN 228
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F+ A+ + +L E A E + + I+ +F++AY+ RG++ LG KKAIKD
Sbjct: 229 FI-AYYNRGIARAELGYLEAATEDFTKSISINPKFAEAYNNRGVICRKLGDIKKAIKDF 286
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 39/239 (16%)
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
N +S+ + L+F + L++ + + + + +++ +RGI + + G
Sbjct: 291 NINSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLINPNDAQAY-----YNRGIVRADLG 345
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
AI F+Q L +P Y ++ RG R ++E AI DF A+ +P EA+ R
Sbjct: 346 DTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSNR 405
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G R LG+ AI+D S+AL PN RG
Sbjct: 406 GNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNRG------------------------- 440
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+AY YL GE++KA E + +AI ++ NF EA+ + Y+ L N +A+ L
Sbjct: 441 --TAYQYL-------GEFQKAIEDYEQAININCNFPEAYYNRGTIYKLLGNKVRAINDL 490
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N AD +ERG+ K DF A++D ++++ AY G+A + +G + A E +
Sbjct: 8 NDADEFNERGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDY 67
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ +F EA+ L +ALE + + I+ F++AY+ R + LG
Sbjct: 68 DEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGD 127
Query: 601 HKKAIKDLS 609
+ A+ D +
Sbjct: 128 VEGAVNDFN 136
>gi|414077915|ref|YP_006997233.1| hypothetical protein ANA_C12709 [Anabaena sp. 90]
gi|413971331|gb|AFW95420.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 460
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S +D +S G N+ Y AI + Q + +P Y +A RG AR + ++AI D
Sbjct: 202 SSDIDKYISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDD 261
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T+AI+ NP+ + + RG A + LG++ AI D ++A+ PN RGI +
Sbjct: 262 WTQAIRINPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELG 321
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A++D S + ++ AY G+A S +G+ + A + +AI ++ N +A+ H
Sbjct: 322 DKQGAIDDYSQAININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHR 381
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L +++ A++ Q + I+ + AY RG++ LG + AI
Sbjct: 382 GYNHYHLGDNQSAIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAI 429
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 98/182 (53%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+++ + AI D+T+AI NP+ +A+ RG AR LG+ AI D ++A+ PN AD +
Sbjct: 218 KKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADTYY 277
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ + + D +A++D + + ++ AY G+A S +G+ + A + + +AI ++
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ A+ + L + + A+ Q + I+ + AY RG + LG ++ AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397
Query: 608 LS 609
+
Sbjct: 398 FT 399
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D SRG+A G SAI + Q + +P Y A RG AR+ + + AI D+++A
Sbjct: 274 DTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQA 333
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NP+ A+ RG AR+ LG+ AI D ++A+ PN AD RG ++ D +
Sbjct: 334 ININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQS 393
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGE-------YKKAEEAHLK 542
A++D + +K++ + AY G+ S +G+ Y+KA + + K
Sbjct: 394 AIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKK 441
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 325 SESYSKSSISDNKSS-DSTESRSKLSFKWDMLKETSNEAKR---NKKFCVTRISKSKSIS 380
S + S + DN+S+ D ++ +D+ A+ +K+ + S++ +I+
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337
Query: 381 VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++ L+ RGIA+ G AI+ + Q + +P +A RG + ++AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
FT+AI+ NP+ +A+ RG + LG+ AI + KA + + + + FK
Sbjct: 398 FTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKKEGNETQYQNAIKQIFK 457
Query: 498 D 498
D
Sbjct: 458 D 458
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F KD+ A++D + + ++ AY GLA +G+ + A + +AI+++ N+ +
Sbjct: 216 FNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADT 275
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +L +++ A++ Q + I+ + AY RG+ LG + AI D S
Sbjct: 276 YYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYS 331
>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
9303]
gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
9303]
Length = 706
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 327 SYSKSSISDNKSSDSTESRS-KLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFR 384
+Y+K +++D + + S +++ +++ ++ E AK+ K I+ +K+I ++ +
Sbjct: 323 AYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQ 382
Query: 385 LS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ RG+ + N G Y AI+ +++ ++ DP + A RG + + + AI+D+
Sbjct: 383 HTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYN 442
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP E + RG + LG AI D +KA+E P A RGI + KD+
Sbjct: 443 KAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDY 502
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D S + ++ ++ A+ A +G+++ A +AI+++ F +A+ +
Sbjct: 503 QGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNRGA 562
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ + + I+ + ++ Y RG + LG ++ AI D +
Sbjct: 563 TKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYN 612
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 19/249 (7%)
Query: 376 SKSISVDFRLSR------GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+K+I+++ +L+ GI +V G Y AI+ F++ ++ +P Y A + RG A+ +
Sbjct: 442 NKAIAINPQLAETYSNRGGIKRV-LGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLK 500
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+D+++AI NP A+ R A+ LG+ AI DL++A+E P AD + R
Sbjct: 501 DYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNR 560
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G ++ D A+ D + + ++ + Y+ G +G Y+ A + KAI++D
Sbjct: 561 GATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQ 620
Query: 550 FLEAWG------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+ A+ +L +QD AL+ + L I RGL H LGQ +
Sbjct: 621 YASAYNNRGWSKYLQGDFQD------ALKDANKALAITPNDGATLDTRGLAKHALGQDRS 674
Query: 604 AIKDLSSGS 612
A KDL S
Sbjct: 675 ACKDLKRAS 683
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A+ + + AISD +A++ NP A++ RG A+ L + AI D +KA+E P
Sbjct: 322 RAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINP 381
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ RG+V D+ A+ D + ++LD ++ AY G+ ++G+Y+ A +
Sbjct: 382 QHTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADY 441
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ E + + + L N + A+ + + I+ +++ AY RG+ + L
Sbjct: 442 NKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKD 501
Query: 601 HKKAIKDLSSGSRTMMPHLI 620
++ AI D S H I
Sbjct: 502 YQGAIADYSKAITINPQHAI 521
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + N G Y AI+ +++ + +P E RG + + AI+DF +AI+ N
Sbjct: 423 NRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEIN 482
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L + AI D SKA+ P A + R + D A+ D
Sbjct: 483 PQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISD 542
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++++ + A+ G +G+++ A + KAI ++ E + + + L
Sbjct: 543 LNRAIEINPQFADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLG 602
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N + A+ + + ID +++ AY+ RG + G + A+KD
Sbjct: 603 NYQGAIADYNKAIEIDPQYASAYNNRGWSKYLQGDFQDALKD 644
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + AI+ +++ + +P E RG + + AI+D+ +AI+ +
Sbjct: 559 NRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEID 618
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG ++ G+ +A++D +KAL PN L RG+ +A +D
Sbjct: 619 PQYASAYNNRGWSKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKD 678
Query: 506 LSACVKLDKENKSAY 520
L L + S Y
Sbjct: 679 LKRASSLGYQGTSQY 693
>gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 453
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F++ +K +P Y A RG A+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA+E PN D + RG
Sbjct: 251 EEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGN 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A++D +KL+ AY GL+ S+G Y++A + + KAI+L+ N
Sbjct: 311 AKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEAN-- 368
Query: 552 EAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + + + L E+AL+ + + +D ++ AY RG + LG K+++KD
Sbjct: 369 DAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKDYE 428
Query: 610 SG 611
+
Sbjct: 429 TA 430
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + +K+ ++ ++ L+ RG A+ N G Y AI +D+ +K +P Y A RG
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGN 276
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A+ E AI DF +AI+ NP+ +A+ RG A+ LG EAI+D KA++ PN
Sbjct: 277 AKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYT 336
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
D RG+ + A++D +KL+ + AY G A S +G +++A + + KA
Sbjct: 337 DAYDNRGLSKISLGLYEEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKDYDKA 396
Query: 544 IQLDRNFLEAW 554
I+LD N+ A+
Sbjct: 397 IKLDINYAYAY 407
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 120/222 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ AY G A ++G Y++A + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+E + + ++ ++ AY+ RG + LG +++AIKD
Sbjct: 283 LYEEAIEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKD 324
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D +KA++ PN A + RG +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D +KL+ AY G A ++G Y++A E KAI+L+ N+ +A+ +
Sbjct: 252 EAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGNA 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
DL E+A++ + + ++ ++ AY RGL LG +++AIKD
Sbjct: 312 KYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKD 358
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G Y AI FD+ ++ +P Y +A RG A+ E AI D+ +AI+ N
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLN 332
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG ++ +LG EAI+D KA++ E N A RG A++D
Sbjct: 333 PNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKD 392
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+KLD AY Y G ++G +K++ + + A+ +D N
Sbjct: 393 YDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKDYETALLIDPN 436
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y AI +D+ +K +P Y +A RG ++ E AI D+ +AI+
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLE 366
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG A++ LG EA++D KA++ + N A RG + F +V+D
Sbjct: 367 ANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKD 426
Query: 506 LSACVKLDKENKSA 519
+ +D N++A
Sbjct: 427 YETALLIDPNNETA 440
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 424 ARAFQRELEAAISD-------FTEAIQS----------NPSAGEAWKRRGQARAALGESV 466
A+ F EL +SD FT + + N + + +G ++A GE
Sbjct: 56 AKVFNEELNKIMSDKKHFIGSFTNIVDNKKEVDIDHLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I A T LGL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAI---------------------------AKTKLGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY+ +GLL LG K+AIKD +
Sbjct: 202 AYNNKGLLEDELGFSKEAIKDFN 224
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDS 61
+++Y L + I + D+ ++++ A R L+K+ +++++ KAI+ L++
Sbjct: 310 NAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNR-GLSKISLGLYEEAIKDYDKAIK-LEA 367
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
A +Y CNR F S L LH+ ++D DKA++LD AY+ +G LG +E
Sbjct: 368 NDAFAY-----CNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKE 422
Query: 122 ALSVWE 127
++ +E
Sbjct: 423 SVKDYE 428
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI+ L+ A +Y NR L L++ I D DKA++L+P AY
Sbjct: 253 AIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKA 328
>gi|384208606|ref|YP_005594326.1| hypothetical protein Bint_1125 [Brachyspira intermedia PWS/A]
gi|343386256|gb|AEM21746.1| TPR repeat-containing protein [Brachyspira intermedia PWS/A]
Length = 348
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 4/241 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A GKY +A+ F+ LK D + +G + E AI D+T++I+ +
Sbjct: 42 RGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGLTEYDMGDYEKAIKDYTKSIKLDN 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G+ + RG AALGE ++I+D + A++ N A+ + RG+ + +D+ A+ D
Sbjct: 102 TIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDAEFYYNRGLAKYNLEDYQNALMDF 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE--EAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + +AY G + Y + + + K+I++D N + A+ + +Y
Sbjct: 162 DKAIEINPKYSNAYNNRGNVKDELN-YNEEDIIADYDKSIEIDNN-INAYFNKALYYDIN 219
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
N EKAL +VL ID+ + +AY RG +L+ L ++ +AIKD + + I L
Sbjct: 220 ENYEKALNLYNKVLEIDEYYIEAYGNRGFVLYKLNKYDEAIKDCNKAIELDSKYWILYLN 279
Query: 625 R 625
R
Sbjct: 280 R 280
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +I + + I N E + RG A LG+ A++D + AL+ + N+ADI + +G+
Sbjct: 19 EKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGL 78
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D+ A++D + +KLD Y GL +++GE++K+ + AI+L++N
Sbjct: 79 TEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDA 138
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E + + +L + + AL + + I+ ++S AY+ RG + L +++ I
Sbjct: 139 EFYYNRGLAKYNLEDYQNALMDFDKAIEINPKYSNAYNNRGNVKDELNYNEEDI 192
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 77/149 (51%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G ++I+ K + + ++A+I + RG+ N K + AA++D + +KLD N Y
Sbjct: 16 GNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYN 75
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GL +G+Y+KA + + K+I+LD + + + Y L EK+++ + ++K
Sbjct: 76 KGLTEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNK 135
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++ Y+ RGL + L ++ A+ D
Sbjct: 136 NDAEFYYNRGLAKYNLEDYQNALMDFDKA 164
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 20 ICEIDELVRVDSVMASAITARIELAKLCSL-RNWSKAIRILDSLLA-QSYEIQDICNRAF 77
I + D+ + +D+ I A A + N+ KA+ + + +L Y I+ NR F
Sbjct: 193 IADYDKSIEIDN----NINAYFNKALYYDINENYEKALNLYNKVLEIDEYYIEAYGNRGF 248
Query: 78 CYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRK---------EEALSVWEK 128
+L + I+DC+KA++LD Y+ + +K +EA K
Sbjct: 249 VLYKLNKYDEAIKDCNKAIELDSKYWILYLNRAEIKFEFAKKNIDDLKKLNDEAFEDINK 308
Query: 129 GYEHALHQSADLKQF 143
YE AL +L +F
Sbjct: 309 SYELALEDEDNLNEF 323
>gi|428317098|ref|YP_007114980.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428240778|gb|AFZ06564.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 732
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G AI + Q +K +P + +AL RG AR + A+ DFT+ ++ NP
Sbjct: 382 RANARYDTGATEQAIEDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S GEA+ +RG A LG+ AI+D ++A+ PN A RG+ D A+ D
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADF 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ + Y G A ++ +Y+ A E + KAI+L + +A+ + Y +LA
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KA+ + + +D + AY+ R + L Q +KA +D S
Sbjct: 562 YDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCS 604
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+++ G A+ F Q+++ +P EA RG A + AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+A G+ A+ D ++AL+ P A + + RG F D+ A+ED
Sbjct: 475 PNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AYT A ++ Y KA + I+LD A+ + Y +L
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLK 594
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+KA E + ++ KAY RGL G + A++D + R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIR 642
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
++P + + RG +A Q + AI+D+T+AI N S E++ +R AR G + +AI
Sbjct: 337 QNPARSKEWLARGVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAI 396
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+D ++A++ P+ L+ RG+ D AVED + V+L+ + AY+ GLA
Sbjct: 397 EDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYD 456
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y+ A E + +AI+L N +A+ + + A+ Q L I + + Y+
Sbjct: 457 LGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYY 516
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
RG L ++ A++D +
Sbjct: 517 SRGRARFNLADYQGAMEDYT 536
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 34/264 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G Y +AI + Q ++ P +A RG AR+ + A++DFT+A+Q +P
Sbjct: 450 RGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISP 509
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---------------------- 484
+ RG+AR L + A++D +KA+E +P+ AD
Sbjct: 510 KQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADC 569
Query: 485 ------------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ R + K F A ED S + L+ N AY+ GLA S+ G+
Sbjct: 570 TEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGD 629
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A E +AI+L+ + A+ + Y +L N A+E L ++ + A++ RG
Sbjct: 630 KQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNNASAFYSRG 689
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMM 616
L+ L AI+D + +
Sbjct: 690 LVRRQLKDRTGAIEDFQKAATLFL 713
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +R A +N Y AI+ + ++ DP A R A ++ + A D +
Sbjct: 546 ADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSL 605
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I N + +A+ RG AR+A G+ A++D ++A+ P+ A RG + + K++
Sbjct: 606 TIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYP 665
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
AVED + ++L+ N SA+ GL + + A E KA L FLE
Sbjct: 666 LAVEDFAHSLRLNPNNASAFYSRGLVRRQLKDRTGAIEDFQKAATL---FLE 714
>gi|334116937|ref|ZP_08491029.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
gi|333461757|gb|EGK90362.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
Length = 804
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RGIA + + Y +AI F+ +++ P +A RG ARA +L+ AI D+TEA
Sbjct: 517 DTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDYTEA 576
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
I+ + +A+ RG+AR LG+ A+ D S+ + +P SAD
Sbjct: 577 IKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636
Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+ R I KD+ A+ D + +K++ + +AY LA
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+ G+ + A AI + N EA+ + + YQ+L N A+ Q + I ++ A
Sbjct: 697 STGGDPQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
Y+ RG++ LG AI DL + +
Sbjct: 757 YYGRGIVRRSLGDKAGAISDLEKAGKMFL 785
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 2/270 (0%)
Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
SSDS SR F W +L A F + S+ I G+ +
Sbjct: 373 SSDSFSSRLGSRFWWLILAGLG--AVIVLIFLFSYGSRPNPIKAKEYYELGVEKARNQDA 430
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
+A+ F++ ++ +P E+ RG A ++ + AI+D+++AI NP +A+ RG
Sbjct: 431 DAALQAFNKSIQLNPKNAESFYQRGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGL 490
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
AR + AI+D ++AL +PN AD +ERGI + +D+ A++D +A ++L
Sbjct: 491 ARNDFNDKRGAIEDYTQALNLQPNDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLV 550
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY GLA + + + A + +AI++D ++A+ + L + + AL QV
Sbjct: 551 KAYHSRGLARAGSADLQGAIGDYTEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQV 610
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ID + + AY R LG H+ AI D
Sbjct: 611 IAIDPKSADAYANRCSTQLNLGAHQAAIDD 640
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + KY AI+ + Q + +P Y +A RG AR + AI D+T+A+ P
Sbjct: 454 RGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGLARNDFNDKRGAIEDYTQALNLQP 513
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + RG A + AIQD + + +PN H RG+ D A+ D
Sbjct: 514 NDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDY 573
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K+D +N A+ G A +G+Y+ A + + I +D +A+ + +L
Sbjct: 574 TEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGA 633
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A++ Q + + Y+ R + L + KAI D
Sbjct: 634 HQAAIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIAD 674
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 16/305 (5%)
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET----SNEAKRN 365
+L + A D++ ++++KS + K+++S R ++ +E S N
Sbjct: 419 ELGVEKARNQDADAALQAFNKSIQLNPKNAESFYQRGNANYDLKKYQEAIADYSQAIALN 478
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
K+ V +RG+A+ + AI + Q L P + RG A
Sbjct: 479 PKY------------VQAYFNRGLARNDFNDKRGAIEDYTQALNLQPNDADTYYERGIAY 526
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q++ + AI DF I+ P+ +A+ RG ARA + AI D ++A++ + + D
Sbjct: 527 LEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDYTEAIKIDAKNVDA 586
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG F D+ A+ D S + +D ++ AY ++G ++ A + +AI
Sbjct: 587 FYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAIS 646
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + + Y +L + KA+ Q L ++ AY+ R L G + AI
Sbjct: 647 LSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSTGGDPQGAI 706
Query: 606 KDLSS 610
D ++
Sbjct: 707 ADFTA 711
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD SRG A+ + G Y A++ + Q++ DP +A R + + +AAI D T
Sbjct: 583 NVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI + G + R A L + +AI D ++AL+ PN + + R + D
Sbjct: 643 QAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSTGGDP 702
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D +A + + N AY + Y A +++AI++ N+ A+
Sbjct: 703 QGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGI 762
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
+ L + A+ L++ +++D+ + Y
Sbjct: 763 VRRSLGDKAGAISDLEKAGKMFLDQGLTGGY 793
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F+ + NP + + G +A ++ A+Q +K+++ P +A+ ++RG N+ K
Sbjct: 403 FSYGSRPNPIKAKEYYELGVEKARNQDADAALQAFNKSIQLNPKNAESFYQRGNANYDLK 462
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ D S + L+ + AY GLA RN
Sbjct: 463 KYQEAIADYSQAIALNPKYVQAYFNRGLA---------------------RN-------- 493
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
D + A+E Q L + + Y+ RG+ +K AI+D ++ R + P
Sbjct: 494 -----DFNDKRGAIEDYTQALNLQPNDADTYYERGIAYLEQQDYKTAIQDFNAVIR-LQP 547
Query: 618 HLI 620
+L+
Sbjct: 548 NLV 550
>gi|296126379|ref|YP_003633631.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018195|gb|ADG71432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 391
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 39/269 (14%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEA 433
K +SV L N+ Y +AI F + +K DP E RG A+A ++ ++
Sbjct: 4 KDVSV--FLKNAYNAFNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKS 61
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI D++ AI N A+ RG + G + EAI+D KA+E N + + RG
Sbjct: 62 AIEDYSWAINLNDKFAAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTK 121
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-------- 545
KD+ ++ED + V++ AY + L+ ++IG YK+A +A+ KAI+
Sbjct: 122 ASLKDYKGSIEDYNKAVEVYPHFSDAYYNMALSHNAIGNYKEAIKAYDKAIEYNSHFADA 181
Query: 546 --------------------------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
L+RNF+EA+ + ++ N + ++E +++
Sbjct: 182 YNNRGNVKEKLGYYNEAIDDYTNALHLNRNFIEAYFNRANAKFNIKNYKGSIEDFDEIIK 241
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID +SKAY+ RG++ + ++K AI+D
Sbjct: 242 IDPTYSKAYYNRGIVKTSMEEYKDAIEDF 270
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 421 RGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV---EAIQDLSKAL 476
+ AF ++ + AI F+EAI+ +P++ E + RG A+A L + AI+D S A+
Sbjct: 11 KNAYNAFNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKSAIEDYSWAI 70
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A + RGI+N F + A+ED ++L+ + AY G +S+ +YK +
Sbjct: 71 NLNDKFAAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTKASLKDYKGS 130
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E + KA+++ +F +A+ ++ + + N ++A++ + + + F+ AY+ RG +
Sbjct: 131 IEDYNKAVEVYPHFSDAYYNMALSHNAIGNYKEAIKAYDKAIEYNSHFADAYNNRGNVKE 190
Query: 597 GLGQHKKAIKDLSSG 611
LG + +AI D ++
Sbjct: 191 KLGYYNEAIDDYTNA 205
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +++ L RG + + Y +I +++ ++ P + +A +
Sbjct: 102 KAIELNYNLEEAYYVRGNTKASLKDYKGSIEDYNKAVEVYPHFSDAYYNMALSHNAIGNY 161
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ N +A+ RG + LG EAI D + AL N + R
Sbjct: 162 KEAIKAYDKAIEYNSHFADAYNNRGNVKEKLGYYNEAIDDYTNALHLNRNFIEAYFNRAN 221
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F K++ ++ED +K+D AY G+ +S+ EYK A E K I+L+ F
Sbjct: 222 AKFNIKNYKGSIEDFDEIIKIDPTYSKAYYNRGIVKTSMEEYKDAIEDFDKVIELEPKFP 281
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A+ + L ++A+E + + ++ ++++Y R +
Sbjct: 282 DAYYNKAVAINHLGIYDEAVEFYDKAIELNPNYAESYCNRAI 323
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
F KD+ A++ S +KLD + Y G A +++ + YK A E + AI L+ F
Sbjct: 17 FNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKSAIEDYSWAINLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + N+++A+E + + ++ +AY++RG L +K +I+D +
Sbjct: 77 AAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTKASLKDYKGSIEDYNK 136
Query: 611 GSRTMMPHL 619
+ PH
Sbjct: 137 AVE-VYPHF 144
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S+ ++ + I+I D +++Y NR + +E +K I D DK ++L+P AY
Sbjct: 232 SIEDFDEIIKI-DPTYSKAY-----YNRGIVKTSMEEYKDAIEDFDKVIELEPKFPDAYY 285
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
K A + LG +EA+ ++K E
Sbjct: 286 NKAVAINHLGIYDEAVEFYDKAIE 309
>gi|440681896|ref|YP_007156691.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679015|gb|AFZ57781.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 371
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI+ ++Q ++ +P A RG +R ++ + AI+D+ +A+ NP GEA+
Sbjct: 126 GQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYN 185
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L + AI D ++A++ P H+RG+V +D+ A++D + ++++
Sbjct: 186 RGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNP 245
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y AL +G+Y+ A + +QL+ +E + F++ L N + A+E
Sbjct: 246 TLPIVYGLRANALHHLGDYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDY 305
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLC 630
+ L + ++ AY LR + LG ++ AI D + N T ++N+
Sbjct: 306 NRALQLQPNYATAYFLRANIHLHLGNNQAAIDDFQKSANFFYQQ--GNTTYYQNII 359
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 421 RGTARAFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG AR FQR + +AAI D +A+ P A+ RG LG+ EAI D ++A++
Sbjct: 84 RGLAR-FQRGDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLN 142
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN + H RG + KD+ A+ D + + ++ + AY GL +S + +Y+ A
Sbjct: 143 PNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIAD 202
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+AIQL+ +A+ Y +L + E A++ Q L ++ Y LR LH LG
Sbjct: 203 FNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLG 262
Query: 600 QHKKAIKD 607
++ AI D
Sbjct: 263 DYQSAIAD 270
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
++V+ ++ G+ + G Y AI+ F+Q ++ +P RG A E + AI+D+
Sbjct: 1 MNVEELITEGVKKNLSGDYRGAITFFNQAIQLNPHLEIVYHYRGHAYLGLEEFDLAIADY 60
Query: 439 TEAIQS-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+A + N +A+ RG AR G++ AI D+ +AL++ P+ RG
Sbjct: 61 QQARHNSTGLENLNFDIAKAYHNRGLARFQRGDNQAAIVDIKQALDYYPDFVAAYSNRGN 120
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ D + ++L+ +AY G + ++ +Y+ A + +A+ ++ F
Sbjct: 121 IFYILGQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFG 180
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + L + + A+ Q + ++ +AYH RGL+ L ++ AI+D +
Sbjct: 181 EAYYNRGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYN 238
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ S A ++ + + +++ +I+ F +RG+ + Y SAI+ F+Q ++ +P
Sbjct: 152 RGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIADFNQAIQLNP 211
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+A RG + + E AI D+ +A+Q NP+ + R A LG+ AI D
Sbjct: 212 GDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLGDYQSAIADS 271
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ L+ P + +R + ++ A+ED + ++L +AY ++I
Sbjct: 272 TRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAY----FLRANIHL 327
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +A + Q NF G+ T +YQ++ N
Sbjct: 328 HLGNNQAAIDDFQKSANFFYQQGNTT-YYQNIIN 360
>gi|354566722|ref|ZP_08985893.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353544381|gb|EHC13835.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 1272
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 142/320 (44%), Gaps = 15/320 (4%)
Query: 298 GRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDS----TESRSKLSFKWD 353
G QT TH + + LS +S N ++ +E++ + K D T + K D
Sbjct: 283 GIQTTDTHAIIEALSDES---NGNSVQAEAWFYEGLQQAKIGDLAGALTYYNKSVELKPD 339
Query: 354 MLKETSNEAKR-----NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFD 405
+ N N + ++ I DF +RG A G + AI+ FD
Sbjct: 340 AYEYWFNRGLTLFYLGNFPEAIASYDRAIGIKPDFYKGWYNRGAALSELGNFTEAIASFD 399
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ LK Y EA GRG + +L AI+ F ++Q P E W RG A A G++
Sbjct: 400 EALKLKHDYHEAWSGRGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQN 459
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+AI ++ALE+ P ++RG+ F D+ A+ + ++++ E A+ L
Sbjct: 460 HDAIACYAQALEYHPEFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAG 519
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+G ++A A+ ++ Q+ NF EAW L N E+A+ + + I+ F
Sbjct: 520 VQEKLGNIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFY 579
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
+ RG+ L LG+ ++AI
Sbjct: 580 LTWFNRGVALDNLGRREEAI 599
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ Q+ G+ + AI+ FD L+ P PE RGTA A + AI+ + +A++ +
Sbjct: 414 GRGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQALEYH 473
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +RG A +G+ EAI + +A++ P + V K + A+
Sbjct: 474 PEFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNIQEAIAA 533
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ A+ G+ L+S+G +++A + KAI ++ NF W + +L
Sbjct: 534 YDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNRGVALDNLG 593
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + + I+ F A++ RG+ LGQ+++AI
Sbjct: 594 RREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAI 633
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G + AI+ + Q ++ +P +A G + ++ AI+ + + Q P
Sbjct: 483 RGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNIQEAIAAYDRSTQIQP 542
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW RG A+LG EAI KA+ PN RG+ A+
Sbjct: 543 NFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGRREEAIASY 602
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++++ + A+ G+A +G+Y++A ++ ++++ ++ EAW
Sbjct: 603 DKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPDYWEAW 650
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 383 FRLSRGIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ G+A V E G AI+ +D+ + P + EA I RG A E AI+ + +
Sbjct: 511 YQAWYGLAGVQEKLGNIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDK 570
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP+ W RG A LG EAI KA+E E + + RG+ F +
Sbjct: 571 AIAINPNFYLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYE 630
Query: 501 AAVEDLSACVKLDKENKSAY 520
A+ +K+ + A+
Sbjct: 631 EAIISYDGSLKIKPDYWEAW 650
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +S I +F + RG+ + G + AI+ +D+ + +P + R
Sbjct: 526 NIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNR 585
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A E AI+ + +AI+ AW RG A+ LG+ EAI +L+ +P+
Sbjct: 586 GVALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPD 645
Query: 482 SADILHERG 490
+ RG
Sbjct: 646 YWEAWLGRG 654
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + K+ +I+ +F L+ RG+A N G+ AI+ +D+ ++ + + A R
Sbjct: 560 NWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNR 619
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
G A+ + + E AI + +++ P EAW RG A
Sbjct: 620 GVAQFYLGQYEEAIISYDGSLKIKPDYWEAWLGRGSA 656
>gi|443329566|ref|ZP_21058151.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442790904|gb|ELS00406.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 449
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP P+ + G + Q++ AI +F +A+ SNP+ +A RG+A L + I+
Sbjct: 226 DP--PQDFVSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIK 283
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D L PN + L R + + + A+ D +++D +N S Y G++ S +
Sbjct: 284 DFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKL 343
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEY KA + +A++LD NF+EA+ + Y +L +KA+ +V+ +D + + AY+
Sbjct: 344 GEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYG 403
Query: 591 RGLLLHGLGQHKKAIKDL 608
RG + LG +++A++D
Sbjct: 404 RGYIYQNLGDNQRAVQDF 421
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A RN T I + DF +S G ++N+ Y AI F+Q L +P +AL GR
Sbjct: 214 AARNNFAIPTNIDPPQ----DF-VSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGR 268
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + ++ A I DF + ++ NP+ R A LG+ +AI D +A+ + +
Sbjct: 269 GEAYYWLKDFPAVIKDFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSD 328
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A + + RGI K +++ A+ D + ++LD AY G + ++GEY KA +
Sbjct: 329 NASLYNSRGISYSKLGEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYS 388
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ I+LD A+ YQ+L ++++A++ QQ
Sbjct: 389 EVIRLDSQHANAYYGRGYIYQNLGDNQRAVQDFQQ 423
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L K HK I + DE +R+DS AS +R I +KL ++ ++++A+R LD ++Y
Sbjct: 309 LGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKLGEYDKAIADYNEALR-LDPNFVEAY 367
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y L + I D + ++LD AY +G + LG + A+
Sbjct: 368 N-----NRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYGRGYIYQNLGDNQRAV---- 418
Query: 128 KGYEHALHQSADLKQ 142
Q+ADL Q
Sbjct: 419 ----QDFQQAADLYQ 429
>gi|327262216|ref|XP_003215921.1| PREDICTED: tetratricopeptide repeat protein 13-like [Anolis
carolinensis]
Length = 823
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E P A+ GRG A + + E A
Sbjct: 118 STNEELAIAYVLIGSGLYDEAIQQFSTMLQEQPELVSAIYGRGIAYGRKGLHDIKNAELA 177
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG VEA+ DLSKA++ +P SA + RG + F
Sbjct: 178 LFELSRVISLAPDHPEVFEQRAEILSPLGRIVEALADLSKAIQLKP-SARLYRHRGTLYF 236
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L++ A Y GL G K+A E+ +A++ +F++A+
Sbjct: 237 ISEDYATAQEDFQNSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFVDAY 296
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + L G++L+ G +A+K+
Sbjct: 297 KSLGQAYRELGNFEAATENFQKALMLNQNHVQTIQLGGMMLYHHGSPDEALKNF 350
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 373 ISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+SK+ + RL RG YA+A F L+ + P A++ +G +
Sbjct: 215 LSKAIQLKPSARLYRHRGTLYFISEDYATAQEDFQNSLELNRNQPIAMLYKGLTFFHRGL 274
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI F EA++ +A+K GQA LG A ++ KAL N + G
Sbjct: 275 LKEAIESFKEALKQKADFVDAYKSLGQAYRELGNFEAATENFQKALMLNQNHVQTIQLGG 334
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++ + + A+++ C++L+ N+ GL+ ++G++ + +A KA+
Sbjct: 335 MMLYHHGSPDEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKAM 388
>gi|124024558|ref|YP_001018865.1| hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
9303]
gi|123964844|gb|ABM79600.1| Hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
9303]
Length = 582
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 6/230 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y AIS + + ++ DP + A RG ++ ++ +AAI+D+ +AI+ +
Sbjct: 333 NRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEID 392
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L + AI D +KA+E +P A RGI D A+ D
Sbjct: 393 PQYAIAYNNRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIAD 452
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ ++++ +N AY GLA S++G Y++A KAIQ+D + A+ G +
Sbjct: 453 YNKAIEINPQNAIAYNNRGLAKSNLGSYQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQG 512
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
D + AL+ + L I RGL H LGQ + A KDL S
Sbjct: 513 DF---QGALKDANKALAIAPNDGATLDTRGLAKHALGQDRSACKDLKRAS 559
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 111/211 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + + L+ +P RG A+ + + AISD+T+AI+ +P A+ RG
Sbjct: 310 YQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRG 369
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
++ L + AI D +KA+E +P A + RG KD+ A+ D + ++LD ++
Sbjct: 370 YSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADYNKAIELDPQH 429
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A++ G+ ++G+ + A + KAI+++ A+ + +L + ++A+ +
Sbjct: 430 AFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSYQEAIADCNK 489
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ID +++ AY+ RG + + G + A+KD
Sbjct: 490 AIQIDPQYAGAYNSRGWIKYLQGDFQGALKD 520
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S+G + R A+ L + AI D SKALE P A+ + RG D+ A+ D
Sbjct: 292 SSGGGYFLRAYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDY 351
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ AY G + + +Y+ A + KAI++D + A+ + DL +
Sbjct: 352 TKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKD 411
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + + +D + + A+ RG+ LG + AI D +
Sbjct: 412 YQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYN 454
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 376 SKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D F S RGI + N G AI+ +++ ++ +P A RG A++
Sbjct: 420 NKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGS 479
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D +AIQ +P A+ RG + G+ A++D +KAL PN L RG
Sbjct: 480 YQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRG 539
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +A +DL L + S Y
Sbjct: 540 LAKHALGQDRSACKDLKRASSLGYQGTSQY 569
>gi|427737387|ref|YP_007056931.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
gi|427372428|gb|AFY56384.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
Length = 671
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 113/217 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ AI ++Q +K +P Y +A GRG AR +E AI+D +AI P +A+ +
Sbjct: 396 GEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADLNQAIAIKPKFTKAYFQ 455
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +G+ +EAI+D SKA+E P A +ERG + + AA +D + ++LD
Sbjct: 456 RGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYALNEKAAAKKDFTKVIELDS 515
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY + +G K+A + + KAI+++ +A+ H ++ + + E A+E
Sbjct: 516 RFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKDIEGAIENY 575
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Q + ++ S AY+ RG LG+ KA+ D S
Sbjct: 576 NQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKA 612
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---------------------- 424
+GIA + Y A+ +F Q +K +P Y A RG A
Sbjct: 320 QGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQQDSSAAIRNNP 379
Query: 425 --------RAFQ----RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
RAF E AI D+ +AI+ NP +A+ RG AR + E+ +AI DL
Sbjct: 380 QDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADL 439
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++A+ +P +RGIV+ + D A++D S ++++ + SAY G ++ E
Sbjct: 440 NQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYALNE 499
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A++ K I+LD F++A+ + DL ++A + ++ + ++ +KAY RG
Sbjct: 500 KAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRG 559
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 360 NEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
+E K N+K + ++++ +I F RGI G AI F + ++ +P Y
Sbjct: 427 HEIKENRK-AIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYAS 485
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG R E AA DFT+ I+ + +A+ R LG +A D KA+
Sbjct: 486 AYYERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAI 545
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E P A RG F+ KD A+E+ + +KL+ +AY G A +G++ KA
Sbjct: 546 EMNPEDAKAYVHRGKYRFQMKDIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKA 605
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ KAI+L+ + A+ + DLA A+E Q
Sbjct: 606 LADYSKAIELNPEYASAYYNRGLLRTDLAKVPGAIEDYQ 644
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%)
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+D Y L +G A + + + A+ F++AI+ NP A+ RG A LG ++
Sbjct: 309 KDLNYARKLYYQGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQ 368
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
QD S A+ P A+ ++R + +FN A+ D + +KL+ E AY GLA
Sbjct: 369 QDSSAAIRNNPQDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHE 428
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
I E +KA +AI + F +A+ ++++ + +A++ + + I+ +++ AY+
Sbjct: 429 IKENRKAIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYY 488
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
RG + L + A KD +
Sbjct: 489 ERGKTRYALNEKAAAKKDFT 508
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + S VD ++R + G A +++ ++ +P +A + RG R ++
Sbjct: 508 TKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKD 567
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI ++ +AI+ N + A+ RG A LG+ +A+ D SKA+E P A + RG
Sbjct: 568 IEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIELNPEYASAYYNRG 627
Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
++ A+ED A +
Sbjct: 628 LLRTDLAKVPGAIEDYQAAADI 649
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYA-----SAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I ++ + + + + +YA +A F ++++ D + +A I R
Sbjct: 474 SKAIEINPKYASAYYERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGY 533
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A D+ +AI+ NP +A+ RG+ R + + AI++ ++A++ + + RG
Sbjct: 534 PKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKDIEGAIENYNQAIKLNSTQSTAYNNRG 593
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL-------ALSSIGEYKKAEEAHLK 542
+ +N A+ D S ++L+ E SAY GL +I +Y+ A + LK
Sbjct: 594 NAYLELGKWNKALADYSKAIELNPEYASAYYNRGLLRTDLAKVPGAIEDYQAAADIFLK 652
>gi|326915587|ref|XP_003204096.1| PREDICTED: tetratricopeptide repeat protein 13-like [Meleagris
gallopavo]
Length = 685
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 71 IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEP 130
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 131 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 189
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 190 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 249
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A E Q+ L +++ + L+G++L+ G +A+K+
Sbjct: 250 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 291
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F L+ + P A++ +G + L+ AI F EA++
Sbjct: 172 RGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 232 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 291
Query: 507 SACV 510
C+
Sbjct: 292 KVCL 295
>gi|449278069|gb|EMC86036.1| Tetratricopeptide repeat protein 13, partial [Columba livia]
Length = 773
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 64 IGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEP 123
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DLSKA++ +P SA + RG + F +D+ A ED
Sbjct: 124 DHPEVFEQRAEILSPLGRISEALSDLSKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 182
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 183 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 242
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A E Q+ L +++ + L+G++L+ G +A+K+
Sbjct: 243 FDAATENFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 284
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
++ +SK+ + RL RG YA+A F L+ + P A++ +G
Sbjct: 145 ALSDLSKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A ++ KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFDAATENFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+G++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|376003788|ref|ZP_09781591.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
gi|375327819|emb|CCE17344.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
Length = 553
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG A + G+Y AIS +DQ LK P A RG A ++ E + AIS + +A++
Sbjct: 306 FSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKY 365
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + LGE +AI +AL+++P+ + RG+ ++ A+
Sbjct: 366 KPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAIS 425
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ G ALS +GEYK+A ++ +A++ ++ AW + L
Sbjct: 426 SYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISSYDEALKYKPDYHVAWYNRGNALSYL 485
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L +A++ RG+ L LG++K+AI
Sbjct: 486 GEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLGEYKQAI 526
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG A + GKY A+S +DQ LK P +A RG A + E + A+S + EA++
Sbjct: 238 FSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYDEALKY 297
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W RG A LGE +AI +AL+++P+ + RG ++ A+
Sbjct: 298 KPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAIS 357
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K ++ A+ G ALS +GEYK+A ++ +A++ + AW + L
Sbjct: 358 SYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGVALSYL 417
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L F A++ RG L LG++K+AI
Sbjct: 418 GEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAI 458
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ LK P +A RG A + E A+S + +A++
Sbjct: 205 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 264
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG+A + LGE +A+ +AL+++P+ + RG + ++ A+
Sbjct: 265 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISS 324
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ G ALS +GEYK+A ++ +A++ + AW + L
Sbjct: 325 YDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLG 384
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L A++ RG+ L LG++K+AI
Sbjct: 385 EYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAI 424
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+Y AIS +DQ LK P A RG A ++ E + AIS + +A++
Sbjct: 341 NRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYK 400
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A + LGE +AI +AL+++P+ + RG ++ A+
Sbjct: 401 PDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISS 460
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G ALS +GEYK+A ++ +A++ + EAW + DL
Sbjct: 461 YDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLG 520
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
++A+ Q L + KA
Sbjct: 521 EYKQAISSFDQALKYKPDYHKA 542
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G AIS F++ ++ P +A RG A ++ E + AIS + +A++ P
Sbjct: 173 GLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 232
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW RG A LG+ +A+ +AL+++P+ RG ++ A+
Sbjct: 233 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 292
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K + + G AL +GEYK+A ++ +A++ + AW + L
Sbjct: 293 EALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEY 352
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L A++ RG L LG++K+AI
Sbjct: 353 KQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAI 390
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W G R G+ AI KA+EF+P+ + RG+ ++ A+ +K
Sbjct: 169 WFNDGLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALK 228
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ A+ G AL +G+Y++A ++ +A++ + +AW + + DL ++AL
Sbjct: 229 YKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQAL 288
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L F + + RG L+ LG++K+AI
Sbjct: 289 SSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAI 322
>gi|225621425|ref|YP_002722684.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
gi|225216246|gb|ACN84980.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
Length = 617
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 125/226 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ + G + AI ++++++ D +A RG ++ + + + A+ DF +
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + +AY G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKD 419
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGK 396
K +D S+ + K+D+ E EA ++ +I K VD +R A+ G
Sbjct: 325 KPNDINAYMSRGNAKYDL--ELYEEAMKD----YDKIIKLDHNYVDAYYNRANAKRELGL 378
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +D+ + +P Y +A RG +++ E AI D+ E+I EA+ G
Sbjct: 379 YKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIG 438
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A+ L ++I+ KA+E P ++ + RG+ + A++D ++L+ +
Sbjct: 439 SAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPND 498
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEK 569
+ Y GL S+G YK+A + + KAI+L N+ A+G+ L Q+ + + + +K
Sbjct: 499 SNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDK 558
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+E Y+ Y+ RG + G +K+A+KD
Sbjct: 559 AIELAPNTAYL-------YNDRGWVKKNAGLYKEALKD 589
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 34/262 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + A+ F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A++++PN + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-- 557
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAMKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 558 -------------------------TQFYQDLANSEKALECLQQ-VLYIDK------RFS 585
+ Y ++ +++ L+ L+ + Y DK +S
Sbjct: 406 SKSELGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKD 607
+AY+ RGL + LG +K+AIKD
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKD 487
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K P A + RG A+ E A+ D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ + +
Sbjct: 356 IKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K + + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL ++A++ + + ++ S Y+ RGL + LG +K+AIKD +
Sbjct: 476 NDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYT 523
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 34/256 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYRYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E + + D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------G 555
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ G
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 556 HLTQFYQDLANS------------------------EKALECLQQVLYIDKRFSKAYHLR 591
+ +D N+ E+A++ +++ +D + AY+ R
Sbjct: 310 LFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNR 369
Query: 592 GLLLHGLGQHKKAIKD 607
LG +K++IKD
Sbjct: 370 ANAKRELGLYKESIKD 385
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 124/238 (52%), Gaps = 10/238 (4%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K ++ +SRG A+ + Y A+ +D+I+K D Y +A R A+ REL
Sbjct: 323 KWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ +I D+ +AI NP+ +A+ RG +++ LG EAI+D ++++ ++ + + G
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +++ ++L AY GL+ + +G YK+A + + K+I+L+ N
Sbjct: 440 AKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDS 499
Query: 552 EAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + LT++ L ++A++ + + + ++ AY RG LGQ+K+AIKD
Sbjct: 500 NTYNNRGLTKY--SLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKD 555
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y AI +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LG+ EAI+D KA+E PN+A + ++RG V + A++D
Sbjct: 530 PNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELAPNTAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 590 YKKALELDPNNEYA 603
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+I +D+ ++ P Y EA RG ++ + AI D+ ++I+ NP+ + RG +
Sbjct: 450 SIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTK 509
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+LG EAI+D +KA+E PN + RG + + A++D ++L
Sbjct: 510 YSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELAPNTAYL 569
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
Y G + G YK+A + + KA++LD N
Sbjct: 570 YNDRGWVKKNAGLYKEALKDYKKALELDPN 599
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AMKDYDKIIK-LDHNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G + S LG EEA+ +E+
Sbjct: 402 NRGLSKSELGMYEEAIKDYEE 422
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E A
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELA 563
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ S + L AY GLA +++G +KKA + + KAI+L +N+ +A+ +
Sbjct: 141 YRYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRG 200
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+E +V+ +D + AY+ RG+ + L +A+KD +
Sbjct: 201 VAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKDFN 251
>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
Length = 581
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A+ N G SA+S F + +K DP A RG ++ + + A+ D+ +AI+
Sbjct: 331 VNRGLARSNMGDPKSALSDFSKAIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKI 390
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + LG+ AI D SKA+ P +D + RGI + KD+ A+
Sbjct: 391 DPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIA 450
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL------- 557
D + +++ +N Y GL ++G+Y++A + KAI+LD + A+ +
Sbjct: 451 DYNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRGLAKIKS 510
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A+S KA+E +D R +KAY RG
Sbjct: 511 GDIQGAIADSNKAIE-------LDPRMAKAYANRG 538
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R A+ + G Y AI + L+ +P A + RG AR+ + ++A+SDF++AI+
Sbjct: 297 IMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSKAIKI 356
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG ++ ALG+ A+ D +KA++ +P +A+ RG+ D+ A+
Sbjct: 357 DPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQGAIA 416
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + ++ ++ AY G+A +Y+ A + KAI++ + + Y +L
Sbjct: 417 DYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLVYDNL 476
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++A+ + + +D +++ AY RGL G + AI D
Sbjct: 477 GDYQRAIADYNKAIELDPQYALAYVNRGLAKIKSGDIQGAIAD 519
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A I R A+ + + AI D A++ NP A+ RG AR+ +G+ A+ D SKA+
Sbjct: 295 AYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSKAI 354
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P +A RG+ D A++D + +K+D N +AY G+ +G+Y+ A
Sbjct: 355 KIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQGA 414
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI ++ +A+ + + + + A+ + + I + ++ Y RGL+
Sbjct: 415 IADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLVYD 474
Query: 597 GLGQHKKAIKD 607
LG +++AI D
Sbjct: 475 NLGDYQRAIAD 485
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D R +RG+ + + G Y AI+ + + + +P + +A RG A+ ++
Sbjct: 385 NKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKD 444
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ + RG LG+ AI D +KA+E +P A RG
Sbjct: 445 YQGAIADYNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRG 504
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D A+ D + ++LD AY G A + + K KA L
Sbjct: 505 LAKIKSGDIQGAIADSNKAIELDPRMAKAYANRGAAKGMLDDAKGGCADFKKAASLGSQL 564
Query: 551 LEAW 554
W
Sbjct: 565 AAQW 568
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G A+ R A+ LG+ AI D + ALE P++A RG+ D +A+ D S
Sbjct: 293 GFAYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSK 352
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+K+D N A++ G++ ++G+ + A + + KAI++D A+ + DL + +
Sbjct: 353 AIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQ 412
Query: 569 KALECLQQVLYIDKRFSKAYHLRGL 593
A+ + + I+ + S AY+ RG+
Sbjct: 413 GAIADYSKAIGINPQHSDAYYNRGI 437
>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 952
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 2/234 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK++ V F RG+++ +Y +I F++I+K +P E+ RG ++A + E +I
Sbjct: 244 SKNVEVYF--YRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESI 301
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF E I+ NP E++ RG ++A L + EAI D + A++ PN + G+
Sbjct: 302 VDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNPNDEKVYFASGLAKAD 361
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ + ++ D + +KL+ +N AY Y G+A + + Y+++ + I+LD +EA+
Sbjct: 362 LERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKLDPKNVEAYF 421
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ L E+++ +V+ + KAY RGL L ++KKAI D +
Sbjct: 422 YRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFN 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK++ V F RGI++ +Y +I F+ +K D E RG ++A E +I
Sbjct: 210 SKNVEVYF--YRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESI 267
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF E I+ NP E++ RG ++A L + E+I D ++ ++ P + + RG+ K
Sbjct: 268 VDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAK 327
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ + A+ D + +KL+ ++ Y GLA + + Y+++ + I+L+ +EA+
Sbjct: 328 LEKYEEAIADFNNAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYF 387
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ DL E+++ +V+ +D + +AY RG+ L +++++I D +
Sbjct: 388 YRGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFN 441
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 123/229 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ N Y AI F++ ++ +P +A RG ++A ++ E +I DF + I+
Sbjct: 115 FARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIEL 174
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RG A+A L + ++I D + A++ + + ++ RGI K + + ++
Sbjct: 175 NPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIV 234
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KLD +N Y Y G++ + + Y+++ + I+L+ +E++ + L
Sbjct: 235 DFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKL 294
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+++ +V+ ++ + ++Y RG+ L ++++AI D ++ +
Sbjct: 295 EKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIK 343
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+ K S +V+ RG+A+ + +Y +I F++++K DP EA RG ++A +
Sbjct: 373 NEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEK 432
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E +I DF E I NP+ +A+ RG ++A L +AI D +K ++ P + RG
Sbjct: 433 YEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFNKVIKLNPKNEIAYLARG 492
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
I N++ K + A+ D + +KL+ N+ +Y G+ + +YK+A
Sbjct: 493 ISNYELKKYEEAIVDFNKAIKLNPNNEESYFNRGILKIHLKKYKQA 538
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ Y AI F++ ++ + E+ RG A+A + E AI DF ++I+ NP
Sbjct: 83 RGLAKTELKLYEEAIEDFNESIELNLKNWESYFARGIAKANLKLYEEAIEDFNKSIELNP 142
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG ++A L + E+I D +K +E P + RG K K + ++ D
Sbjct: 143 KNEKAYFNRGISKAKLKKYEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDF 202
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD +N Y Y G++ + + Y+++ AI+LD +E + + L
Sbjct: 203 NNAIKLDSKNVEVYFYRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLER 262
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+++ +++ ++ + ++Y RG+ L +++++I D +
Sbjct: 263 YEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFN 305
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ ++ Y AI F++ + + +A RG A+ + E AI DF E+I+
Sbjct: 47 FNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLYEEAIEDFNESIEL 106
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N E++ RG A+A L EAI+D +K++E P + RGI K K + ++
Sbjct: 107 NLKNWESYFARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIV 166
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +N+ AY G A + + +Y+K+ AI+LD +E + + L
Sbjct: 167 DFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKL 226
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+++ + +D + + Y RG+ L +++++I D +
Sbjct: 227 ERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFN 271
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 121/234 (51%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ +RG+++ KY +I F++++K +P E+ RG ++A + E AI+DF
Sbjct: 280 NVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFN 339
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ NP+ + + G A+A L E+I D ++ ++ + + RG+ + +
Sbjct: 340 NAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERY 399
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
++ D + +KLD +N AY Y G++ + + +Y+++ + I + N +A+ +
Sbjct: 400 EESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGL 459
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L +KA+ +V+ ++ + AY RG+ + L ++++AI D + +
Sbjct: 460 SKAQLERYKKAIVDFNKVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIK 513
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 92/170 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ G+A+ + +Y +I F++++K + EA RG A+A E +I DF E I+
Sbjct: 353 FASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKL 412
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P EA+ RG ++A L + E+I D ++ + F PN RG+ + + + A+
Sbjct: 413 DPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIV 472
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D + +KL+ +N+ AY G++ + +Y++A KAI+L+ N E++
Sbjct: 473 DFNKVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNEESY 522
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 115/225 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI++ KY +I F+++++ +P +A RG A+A ++ E +I DF AI+
Sbjct: 149 FNRGISKAKLKKYEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKL 208
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ E + RG ++A L E+I D + A++ + + ++ RG+ K + + ++
Sbjct: 209 DSKNVEVYFYRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIV 268
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ +N +Y G++ + + +Y+++ + I+L+ +E++ + L
Sbjct: 269 DFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKL 328
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ + ++ K Y GL L +++++I D +
Sbjct: 329 EKYEEAIADFNNAIKLNPNDEKVYFASGLAKADLERYEESIVDFN 373
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ RG+++ KY +I F++++ +P +A RG ++A + AI DF
Sbjct: 416 NVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFN 475
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ NP A+ RG + L + EAI D +KA++ PN+ + RGI+ K +
Sbjct: 476 KVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNEESYFNRGILKIHLKKY 535
Query: 500 NAAVEDLSACVK 511
A+ D K
Sbjct: 536 KQAINDFKIFAK 547
>gi|449497203|ref|XP_002190494.2| PREDICTED: tetratricopeptide repeat protein 13 [Taeniopygia
guttata]
Length = 839
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
S + L+ + G Y AI F +L+E+P A+ GRG A + + E A
Sbjct: 118 STNEELAIAYVLIGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELA 177
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 178 LFELSRVISLEPDHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYF 236
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED ++L+K A Y GL G K+A E+ +A++ +F++A+
Sbjct: 237 ISEDYATAHEDFQRSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAY 296
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N + A E Q+ L +++ + L+G++L+ G +A+K+
Sbjct: 297 KSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 350
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F + L+ + P A++ +G + L+ AI F EA++
Sbjct: 231 RGTLYFISEDYATAHEDFQRSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 290
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 291 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 350
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 351 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 388
>gi|118088252|ref|XP_419586.2| PREDICTED: tetratricopeptide repeat protein 13 [Gallus gallus]
Length = 847
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 138 IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVISLEP 197
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 198 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 256
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 257 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 316
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A E Q+ L +++ + L+G++L+ G +A+K+
Sbjct: 317 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 358
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F L+ + P A++ +G + L+ AI F EA++
Sbjct: 239 RGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 299 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 358
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 359 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 396
>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 1056
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ ++Q L DP Y ALI RG + + ++AI ++ +A+Q N
Sbjct: 201 NRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQALQLN 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG GE AI D + AL+ +P L RG D++ A+ D
Sbjct: 261 PKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ AY G+AL + GEY +A + +A++LD ++ A+ + ++
Sbjct: 321 YGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ Q L + ++KAY+ RGL Q+ +AI+D
Sbjct: 381 EHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIED 422
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A ++G+Y AI+ +DQ L+ +P Y A I RG A + E AISD+ +A+Q +
Sbjct: 541 SRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQID 600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
++ A+ RG GE AI D +AL+ +P + RG K +++ A+ D
Sbjct: 601 QNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIAD 660
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + +AY G + GEY A + KAI + + ++ H +
Sbjct: 661 YDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKG 720
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ E+++ L + + ++ R+++AY RGL H G+ +A+ D + +R
Sbjct: 721 DLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAAR 768
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 126/237 (53%), Gaps = 3/237 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A ++ +Y AI+ ++Q L+ DP Y A + RG A + E + AI+D+ + +Q +
Sbjct: 133 NRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQID 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + ++ RG A GE A+ D ++AL +P L RG V F+ K +++A+E
Sbjct: 193 PRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDV-FRIKGQYDSAIE 251
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++L+ ++K AY G + GEY +A + A+Q+D ++ A + +
Sbjct: 252 NYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSK 311
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ ++A+ L I+ ++ AY+ RG+ L G++ +AI D R + P ++
Sbjct: 312 GDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALR-LDPKYVF 367
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG++ N+ +Y AI ++Q+++ DP + A RG A + E AI+D+ +A+ +
Sbjct: 405 GRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG+A GE AI D +AL P A L+ R + + + A+
Sbjct: 465 PKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIAS 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + AY GLA GEY +A + +A+QL+ ++ A+ + Y+
Sbjct: 525 YDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKG 584
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+ Q L ID+ AY+ RGL H G++ +AI D
Sbjct: 585 EHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIID 626
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG +G+Y SAI ++Q L+ +P A RG + E + AI+D+ A+Q
Sbjct: 234 INRGDVFRIKGQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQI 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A RG A + G+ AI D AL+ PN A + RG+ +++ A+
Sbjct: 294 DPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIM 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + A+ G A S GE+ A + +A++L N+ +A+ +Q+
Sbjct: 354 DYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNK 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A +A+E +QV+ +D RF AY+ RG L G+ AI D
Sbjct: 414 AQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIAD 456
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A V++G Y AI + L+ +P Y A GRG A + E + AI D+ +A++
Sbjct: 302 VNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRL 361
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + GE AI D ++AL PN A + RG+ +N A+E
Sbjct: 362 DPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIE 421
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD +AY G AL S GE A + KA+ LD + + + +QD
Sbjct: 422 DYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDK 481
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L ++ + + A + R +L +H +AI
Sbjct: 482 GEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAI 522
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 4/247 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G++ AI+ ++Q L+ P Y +A GRG + + + AI D+ + I+ +
Sbjct: 371 NRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLD 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE AI D KAL +P SA + RG +++ A+ D
Sbjct: 431 PRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIAD 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ ++ A L E+ +A ++ +A+QL+ ++ A+ +QD
Sbjct: 491 YDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKG 550
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI-WNLT 624
++A+ Q L ++ R+ AY RG G+H +AI D + + +I +N
Sbjct: 551 EYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYN-- 608
Query: 625 RWRNLCF 631
R LCF
Sbjct: 609 -NRGLCF 614
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 114/229 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A ++G+Y AI+ ++Q+L+ DP + RG A + E + A++D+ +A+
Sbjct: 166 LNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRGLAFQGKGEYDRAVADYNQALTL 225
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A RG G+ AI++ ++AL+ P S + RG V + +++ A+
Sbjct: 226 DPGYTIALINRGDVFRIKGQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIA 285
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ +++D A G A S G+Y +A + A+Q++ N+ A+ Q+
Sbjct: 286 DYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNK 345
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L +D ++ A+ RG G+H AI D + R
Sbjct: 346 GEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALR 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N+G Y AI+ +D L+ DP A RG A + E + AI+D+ +I+
Sbjct: 64 INRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKL 123
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG A + E AI D ++AL +P RG +++ A+
Sbjct: 124 SSDKAAVYNNRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIA 183
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++D + +Y GLA GEY +A + +A+ LD + A + ++
Sbjct: 184 DYNQVLQIDPRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK 243
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A+E Q L ++ + AY+ RG + + G++ +AI D +S
Sbjct: 244 GQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNS 289
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 116/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N G++ AI+ F+ L+ +P A I RG A + + + AI+D+ A+Q +
Sbjct: 31 ARGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQID 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ A+ RG A GE AI D +++++ + A + + RG+ F ++++ A+ D
Sbjct: 91 PNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + SA G A S GEY +A + + +Q+D + ++ + +Q
Sbjct: 151 YNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRGLAFQGKG 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ Q L +D ++ A RG + GQ+ AI++ +
Sbjct: 211 EYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYN 254
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 135/576 (23%), Positives = 235/576 (40%), Gaps = 90/576 (15%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA----------- 122
NR + E + I D ++AL+LDP L A + +G AF + G + A
Sbjct: 133 NRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQID 192
Query: 123 -----------LSVWEKG-YEHALHQSADLKQFLELEELLTAAKQDRS----VTCEYDVS 166
L+ KG Y+ A+ AD Q L L+ T A +R + +YD
Sbjct: 193 PRSVVSYNNRGLAFQGKGEYDRAV---ADYNQALTLDPGYTIALINRGDVFRIKGQYD-- 247
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPD----LCN 222
S++ L N K S+ + N+ + R +++ S DP L N
Sbjct: 248 ---SAIENYNQALQLNPK-SKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVN 303
Query: 223 -GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF 281
G + +KG + G + +++ N+ + +G A ++ E +R D +
Sbjct: 304 RGDAFVSKGDYDRAIGDYGHAL-----QINPNYAFAYNGRGV--ALQNKGEYDRAIMD-Y 355
Query: 282 DIC---NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKS 338
D + A N ++ G HDV A N + S +Y+K+
Sbjct: 356 DQALRLDPKYVFAFANRGDAFRSKGEHDVA------IADYNQALRLSPNYAKAY------ 403
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL-----SRGIAQVN 393
+ LSF+ N+A+ N+ + I +D R +RG A V+
Sbjct: 404 -----NGRGLSFQ--------NKAQYNRAIE----DYEQVIRLDPRFVAAYNNRGFALVS 446
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEA 451
+G+ AI+ +D+ L DP RG RAFQ E + AI+D+ +A++ NP A
Sbjct: 447 KGEPTLAIADYDKALLLDPKSATVYANRG--RAFQDKGEYDRAIADYDQALRLNPKDAIA 504
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
R E AI +AL+ P + RG+ +++ A+ + ++
Sbjct: 505 LNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQ 564
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ +AY G A GE+ +A + +A+Q+D+N + A+ + + + ++A+
Sbjct: 565 LNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAI 624
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L ID +S + RG H G++ +AI D
Sbjct: 625 IDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIAD 660
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+Y AI +D+ L+ DPMY I RG A + E + AI+D+ A+Q +
Sbjct: 609 NRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQID 668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG GE AI D KA+ +P+ A+ + RG V D +V D
Sbjct: 669 PRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVAD 728
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEA 553
L+ ++L+ AY GL + GE + AE A LK + D FL A
Sbjct: 729 LTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAARLKPEFENDPAFLAA 782
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A +G+Y AI+ +D+ L+ DP A RG + E + AI D+ +AI
Sbjct: 642 INRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILI 701
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P ++ RG G+ ++ DL++A+ P A+ +RG+ + + A+
Sbjct: 702 KPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALA 761
Query: 505 DLSACVKLDKE 515
D + +L E
Sbjct: 762 DFAEAARLKPE 772
>gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 595
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ + G AI FD+ ++ +P P A RG A +AA+ D+T+ I+
Sbjct: 209 FEQGVEHLKSGNVQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIEL 268
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS +A+ +RG AR L + A++D ++ ++ + N + RGI N++ + AA+
Sbjct: 269 APSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIA 328
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL ++L+ +N AY GL LS++G ++A + +AI+ + N +A+ + + L
Sbjct: 329 DLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHL 388
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG-SRTMMPHLIWN 622
A+ A++ Q + ID S AY R LG ++ AI D + ++ H+ +N
Sbjct: 389 ADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYN 447
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + + D RG+A+ + + A+ F ++++ +A RG A +
Sbjct: 263 TKLIELAPSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQ 322
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AAI+D +AIQ NP +A+ RG +A+G EA+ D ++A+E+ PN A + RG
Sbjct: 323 YKAAIADLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRG 382
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
F D+ AV+D + + +D + AYT A ++G Y+ A +AI + N
Sbjct: 383 RTRFHLADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNN 442
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + +L + +KAL+ Q + I+ + AY RG + LG ++ A++D +
Sbjct: 443 HIAYNNRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQ 502
Query: 611 GSR 613
R
Sbjct: 503 AIR 505
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G A++ + Q ++ +P +A RG R + A+ D+T+AI +
Sbjct: 346 ARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHLADYRGAVDDYTQAIAID 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R QA+ LG +AI D ++A+ PN+ + R I + KD+ A++D
Sbjct: 406 PTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYNNRCIAHLNLKDYQKALKD 465
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ ++AY G +G+ + A E + +AI+L+ N A+ + + +
Sbjct: 466 CSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQAIRLNPNNSVAYTNRARVRRKFG 525
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ AL+ + + ++ + AY RGL LG +AI D S+
Sbjct: 526 DNSGALDDYTKAIQLNPNNAFAYSGRGLTHAELGNTMEAINDFEQASK 573
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I+++ + + + +R IA +N Y A+ Q ++ +P Y A I RG R
Sbjct: 432 CTEAITQNPNNHIAYN-NRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKL 490
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D+T+AI+ NP+ A+ R + R G++ A+ D +KA++ PN+A
Sbjct: 491 GDNQGALEDYTQAIRLNPNNSVAYTNRARVRRKFGDNSGALDDYTKAIQLNPNNAFAYSG 550
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKEN 516
RG+ + + + A+ D KL +N
Sbjct: 551 RGLTHAELGNTMEAINDFEQASKLHLDN 578
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 49 LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L +W A+ L+ +S + Q +R QL +K I D D+A+QL+P QAY
Sbjct: 286 LEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQNAQAYA 345
Query: 108 LKGCAFSALGRKEEALSVWEKGYEH 132
+G SA+G ++EA++ + + E+
Sbjct: 346 ARGLVLSAMGNQQEAMADYTQAIEY 370
>gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase
[Trichodesmium erythraeum IMS101]
gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
erythraeum IMS101]
Length = 746
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A AI+ + Q++K P + RG AR F + + ++ D+ + I+
Sbjct: 489 LGRGVAYAANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKI 548
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RR L E +A D ++A++ P + + R I +++ A+
Sbjct: 549 NPKNEDAYARRCSTYLNLAEYEKAASDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAIS 608
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +N Y GLA + + +KA E + +AI L+ N EA+ + Y +
Sbjct: 609 DCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQ 668
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
N ++A+ Q + ++ +++AY+ RGL+ +G K AI DL + ++ +
Sbjct: 669 KNYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISDLDTAAQLYL 720
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+ ++ SI + +G + +G +AI ++ + +K PE GRG A
Sbjct: 335 VVSFFNRPNSIKAEKVFKQGEERARDGDIPAAILLYSKAIKGFEK-PEYFYGRGNAYYEL 393
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AISD+T+AI NPS A+ RG +AI D ++ L +P A+ ++
Sbjct: 394 KNYQNAISDYTKAILLNPSNVNAYFNRGVVYFEQQNYPKAINDFTQILRLQPEHAEAYYK 453
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY-TYL--GLALSSIGEYKKAEEAHLKAIQ 545
RG+V +K +D+ A++D + + L AY YL G+A ++ +KA + + I+
Sbjct: 454 RGLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANNNLQKAIADYTQMIK 513
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ + + + + + +L+ QV+ I+ + AY R L +++KA
Sbjct: 514 IKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAA 573
Query: 606 KD 607
D
Sbjct: 574 SD 575
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N +Y AIS + ++ +P E I RG A +L+ AI D+T+AI N
Sbjct: 592 NRCIAYLNLQEYQKAISDCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLN 651
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ R +AI D +A+ P A + RG+V D A+ D
Sbjct: 652 PNKPEAYANRANVYNEQKNYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISD 711
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
L +L LA G YK A+ K +LD
Sbjct: 712 LDTAAQLY-----------LAQGRAGGYKDAQYEIEKLKKLD 742
>gi|427710394|ref|YP_007052771.1| hypothetical protein Nos7107_5106 [Nostoc sp. PCC 7107]
gi|427362899|gb|AFY45621.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 226
Score = 104 bits (260), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 374 SKSKSISVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+K+ S ++F+ +G+ ++ +G +++A++ FD++++++P + E RG A++ +L
Sbjct: 30 AKTPSSQINFQEYFQQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDL 89
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI DF +A+Q NP +A+ RG A LG +AI D + L+ +P S D + RG+
Sbjct: 90 QAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGL 149
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
FK ++ AA+ D + + L+ + AY GLA ++G+ + A
Sbjct: 150 AYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNA 194
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AA++DF + +Q NP E + RG A++ LG+ AI D ++AL+ P
Sbjct: 45 QGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLNP 104
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + RG V + + A+ D +A +K+D ++ AY GLA
Sbjct: 105 QHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLA-------------- 150
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
Y N + A+ Q + ++ + + AY RGL + LG
Sbjct: 151 --------------------YFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGD 190
Query: 601 HKKAIKDLSSGS 612
+ AI DL +
Sbjct: 191 QRNAIADLQQAA 202
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G +AI F+Q L+ +P + +A RGT A L+ AI+DF ++ +P
Sbjct: 79 RGLAKSQLGDLQAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG A AI D ++A+ P AD RG+ + D A+ DL
Sbjct: 139 QSVDAYYNRGLAYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNAIADL 198
Query: 507 SACVKLDKENKSAYTY 522
+ ++ +Y
Sbjct: 199 QQAAAIFRQQGDTASY 214
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 50/95 (52%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D SRG G AI+ F+ LK DP +A RG A Q+ +AAISDF +
Sbjct: 107 IDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNPQAAISDFNQ 166
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI NP +A+ RG A+ LG+ AI DL +A
Sbjct: 167 AISLNPQLADAYGNRGLAKYTLGDQRNAIADLQQA 201
Score = 40.4 bits (93), Expect = 3.7, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 NWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+S A+ D ++ Q+ + + C R SQL + I D ++ALQL+P + AY +
Sbjct: 54 NFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLNPQHIDAYNSR 113
Query: 110 GCAFSALGRKEEALS 124
G ++ LG ++A++
Sbjct: 114 GTVYAQLGNLQKAIA 128
>gi|428206561|ref|YP_007090914.1| hypothetical protein Chro_1521 [Chroococcidiopsis thermalis PCC
7203]
gi|428008482|gb|AFY87045.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 379
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S+ +F +G+ + +YA A+ D ++ P Y +A RG A E AI+
Sbjct: 6 SLEAEFFYQQGLRRNKAEQYAEALLSLDVAVEYKPDYADAWSQRGIALGSLNRHEEAIAS 65
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F AI P A W RG A LG +EA+ +ALEF P++A I H RGI
Sbjct: 66 FDRAITLRPDASWVWHNRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLG 125
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ AV + ++L + A+ G AL + +Y A ++ +A++ + L W +
Sbjct: 126 CYEKAVINFEKTIQLRPDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNR 185
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D KA+ + L ID +SKA++ +G+ L LG A+
Sbjct: 186 GITLSDWGEYTKAVASFDRALAIDPEYSKAWYNKGVALRKLGDFTAAV 233
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y A++ FD+ L+ +P RG E A+ +F + IQ
Sbjct: 82 NRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLGCYEKAVINFEKTIQLR 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A AW RG A L + A+ +ALEF+P+ + RGI + ++ AV
Sbjct: 142 PDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNRGITLSDWGEYTKAVAS 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +D E A+ G+AL +G++ A + ++L+ N AW + +
Sbjct: 202 FDRALAIDPEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPNDFWAWYNRGLSLAQVG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
E A+ + L I + ++ GL L+ L ++++AI + + + + PH
Sbjct: 262 EKEAAIASYKHALSIQPQDMAVWYDCGLALYELCRYQEAIA-IYTKALEVQPH 313
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +YA+A+ FD+ L+ P RG + E A++ F A+ +
Sbjct: 150 NRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNRGITLSDWGEYTKAVASFDRALAID 209
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG+ A+ + +E EPN + RG+ + + AA+
Sbjct: 210 PEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPNDFWAWYNRGLSLAQVGEKEAAIAS 269
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + + GLAL + Y++A + KA+++ + W ++ Y +
Sbjct: 270 YKHALSIQPQDMAVWYDCGLALYELCRYQEAIAIYTKALEVQPHTPIFWYNIACCYALQS 329
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+E+A+ LQQ + I + + H + Q ++ ++L S SR
Sbjct: 330 QAEQAVISLQQAIQISPDKYRTLAKNSSVFHTISQDER-FQNLISESRV 377
>gi|431806833|ref|YP_007233731.1| hypothetical protein BPP43_00580 [Brachyspira pilosicoli P43/6/78]
gi|430780192|gb|AGA65476.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
P43/6/78]
Length = 352
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 149/288 (51%), Gaps = 3/288 (1%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N ++E+YS ++++ E +K +S K + +N NK+ + R++
Sbjct: 39 NNIDAENYSDFDDFNDRAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++
Sbjct: 99 H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ A+ RG ++ LG EAI+D KAL +PN D + +G++ +
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +KL+ AY G+A ++G Y++A + + KAI+L+ N+ A+ +
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+L E+A+E + + ++ + AY+ RG LG +++A+KD
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEALKD 324
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F++ +K +P Y A RG A+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ P+ D + RG
Sbjct: 251 EEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGF 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A++D ++LD N+ A
Sbjct: 311 TKENLGLYEEALKDYKKALELDPSNECA 338
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
A+AF EL +SD FT + +N + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I A T LGL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAI---------------------------AKTKLGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY+ +GLL LG K+AIKD +
Sbjct: 202 AYNNKGLLEDELGFSKEAIKDFN 224
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I D DKA++L+P + AY
Sbjct: 253 AIKDYNKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G LG EEAL ++K E
Sbjct: 307 NRGFTKENLGLYEEALKDYKKALE 330
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I+D +KA++L+P AY
Sbjct: 219 AIKDFNKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
>gi|296127340|ref|YP_003634592.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019156|gb|ADG72393.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 617
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 121/226 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ N + AI + ++++ D +A RG ++ + + AI DF +
Sbjct: 194 DAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P+ A+ RG ++ LG EAI+D KA++ PN AD + R + F
Sbjct: 254 LELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D +K ++ + Y G A + Y++A + + K I+LD N+ +A+ +
Sbjct: 314 AIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++L +A++ + +Y++ +S+AY+ RGL GLG +K+AIKD
Sbjct: 374 RELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKD 419
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 56/277 (20%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K I+V ++RG A+ + Y AI +D+I+K D Y +A R A+ REL
Sbjct: 325 KPKDINV--YINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL------------------- 472
AI D+ +AI NP+ EA+ RG A++ LG EAI+D
Sbjct: 380 NEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 473 ---------------SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
KA+E P ++ + RG+ + + A++D ++L+ +
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDS 499
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEKA 570
+ Y GL SS+G YK+A + + KAI+L N++ A+ + L ++ + + + +KA
Sbjct: 500 NTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDYDKA 559
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+E + Y+ Y+ RG + G +K+A+KD
Sbjct: 560 IELKPNMAYL-------YNDRGWVKKNAGLYKEALKD 589
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI +D +K P I RG A+ E AI D+ + I+ + + +A+
Sbjct: 309 GLFKEAIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYN 368
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R A+ LG EAI+D KA+ PN ++ + RG+ + A++D + L
Sbjct: 369 RANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCA 428
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N AY +G A +G K++ + + KAI+L + EA+ + DL ++A++
Sbjct: 429 DNPEAYYNIGSAKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDY 488
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ + ++ S Y+ RGL LG +K+AIKD S + P+ ++
Sbjct: 489 DKSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIE-LSPNYVY 534
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ + G Y AI +D+ +K +P Y + R ++ + AI D+ AI+
Sbjct: 266 NRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKEAIKDYDNAIKWK 325
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A+ L EAI+D K ++ + N D + R + +N A++D
Sbjct: 326 PKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKD 385
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ AY GLA S +G YK+A + + ++I L + EA+ ++ DL
Sbjct: 386 YDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGSAKYDLG 445
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+++++ + + + +S+AY+ RGL + L +K+AIKD
Sbjct: 446 LLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKD 487
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ + G +I +D+ ++ P Y EA RG ++ + AI D+ ++I+ NP+
Sbjct: 438 GSAKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPN 497
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG +++LG EAI+D SKA+E PN RG + ++ A++D
Sbjct: 498 DSNTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDYD 557
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++L Y G + G YK+A + + KA++L+ N
Sbjct: 558 KAIELKPNMAYLYNDRGWVKKNAGLYKEALKDYKKALELEPN 599
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 74/134 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + Y AI +D+ ++ +P RG ++ + AI D+++AI+ +
Sbjct: 470 NRGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELS 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LGE EAI+D KA+E +PN A + ++RG V + A++D
Sbjct: 530 PNYVYAYSNRGSAKDELGEYKEAIKDYDKAIELKPNMAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++L+ N+ A
Sbjct: 590 YKKALELEPNNEYA 603
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LDS +Y NRA +L L+ I+D DKA+ L+P +AY
Sbjct: 348 AIKDYDKIIK-LDSNYTDAY-----YNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G A S LG +EA+ +E+
Sbjct: 402 NRGLAKSGLGMYKEAIKDYEE 422
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR------IELAKLCSLRNWSKAIRILDSL 62
++Y L ++I D+ + + + A R +EL K +++++ K+I L+
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYK-EAIKDYDKSIE-LNPN 497
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+ +Y NR S L L+K I+D KA++L P + AY +G A LG +EA
Sbjct: 498 DSNTYN-----NRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEA 552
Query: 123 LSVWEKGYE 131
+ ++K E
Sbjct: 553 IKDYDKAIE 561
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V+ + A+E + + L AY GLA +++G +KKA + + KAI+L +N
Sbjct: 132 GVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKN 191
Query: 550 FLEAWGHLTQFYQDLANSEK-ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +A+ + ++ AN K A+E +V+ +D + AY+ RG+ + L +AIKD
Sbjct: 192 YKDAY-YNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKDF 250
Query: 609 S 609
+
Sbjct: 251 N 251
>gi|158337072|ref|YP_001518247.1| hypothetical protein AM1_3945 [Acaryochloris marina MBIC11017]
gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 594
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 365 NKKFCVTRISKSKSISVDFR----------------LSRGIAQVNEGKYASAISIFDQIL 408
N+ + T + SKS D+ L+RG+A Y +A+ F+Q+L
Sbjct: 264 NRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVL 323
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ D PEA + RG A A AAI D+ + I+ P + A+ RG A + +G++ A
Sbjct: 324 QRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATA 383
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D SKAL+ +P A L+ RG+V + A+ D +A +++D + +AY G A
Sbjct: 384 LADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 443
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G + A +AI + A+ + + +E A+ QVL +D +F+ AY
Sbjct: 444 KAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAY 503
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG L G A+KD S
Sbjct: 504 TNRGNLHAAQGDRDAALKDYS 524
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 37/262 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ + +G + AI +D+ ++ + Y A + RG A ++AI+D+T+ IQ
Sbjct: 229 LRQGVEKYGKGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQL 288
Query: 445 NP-------------------------------------SAGEAWKRRGQARAALGESVE 467
NP EA+ RG+A AA G +
Sbjct: 289 NPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLA 348
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AIQD + ++F+P SA RG+ K D A+ D S ++LD + +A GL
Sbjct: 349 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQ 408
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G + A +IQ+D + A+ + + N+E A+ Q + + + A
Sbjct: 409 LNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLA 468
Query: 588 YHLRGLLLHGLGQHKKAIKDLS 609
Y+ RG+ GQ++ AI D S
Sbjct: 469 YYNRGIAHSTAGQNEAAIADYS 490
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A G + +AI + Q++K P A RG A + + A++D+++A+Q
Sbjct: 334 LNRGRAHAASGNHLAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQL 393
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A RG + G S +AI D + +++ + A RG + K + AA+
Sbjct: 394 DPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIA 453
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + + E+ AY G+A S+ G+ + A + + ++LD F A+ + +
Sbjct: 454 DFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQ 513
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + AL+ Q + + + AY+ R L+ L Q+++A+ D ++
Sbjct: 514 GDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEALSDYQQAAK 562
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G A+A++ + + L+ DP Y AL RG + Q + AI+DFT +IQ
Sbjct: 368 FNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQM 427
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--HERGIVNFKFKDFNAA 502
+ A+K RG A G + AI D ++A+ F N+ D L + RGI + AA
Sbjct: 428 DTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITF--NAEDTLAYYNRGIAHSTAGQNEAA 485
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S +KLD + +AYT G ++ G+ A + + +AI+ + A+ + +
Sbjct: 486 IADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHS 545
Query: 563 DLANSEKALECLQQVLYI 580
L E+AL QQ I
Sbjct: 546 ALRQYEEALSDYQQAAKI 563
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---ILH 487
+ AI D+ +AIQ N + A+ RG A LG S AI D +K ++ P + + I
Sbjct: 241 FKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTKIYL 300
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ K++ AA++D + ++ D +N AY G A ++ G + A + + + I+
Sbjct: 301 NRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKFQ 360
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ + Y + ++ AL + L +D +++ A + RGL+ G + AI D
Sbjct: 361 PKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIAD 420
Query: 608 LSS 610
++
Sbjct: 421 FTA 423
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 378 SISVDFRLS-----RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQR 429
SI +D + + RG A + G +AI+ F Q + ED + A RG A +
Sbjct: 424 SIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAG 480
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ EAAI+D+++ ++ +P A+ RG AA G+ A++D S+A+E P +A + R
Sbjct: 481 QNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNR 540
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
+++ + + A+ D K+
Sbjct: 541 ALIHSALRQYEEALSDYQQAAKI 563
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + +T +K+ I +++ +G+A N G Y A+ ++ ++ DP P +
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + E AI+ + E+I+ +P AW G A A+ G EAI+ +KA+E +P
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+++ L +G + + A++ L ++++ +N A+ G L ++G Y++A EA
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFD 380
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA +LD AW + L N ++A++ + + ID + ++ +G+ L LG +
Sbjct: 381 KATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSY 440
Query: 602 KKAIK 606
+++IK
Sbjct: 441 EESIK 445
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ +++ ++ DP A G G A A E AI + +AI+ +P EA +G
Sbjct: 270 YEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKG 329
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A +G EAI+ L KA+E P +A +++G + ++ AVE +LD +
Sbjct: 330 FALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKK 389
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SA+ G ALSS+G Y +A +A+ KAI++D W + +L + E++++ +
Sbjct: 390 SSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDK 449
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ I+ S + +GL+L LG ++ AIK
Sbjct: 450 AIEINLSSSVTWANKGLVLSILGNYEGAIK 479
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 117/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A N YA A+ +D+ ++ + A +G + + E A++ + +A++ N
Sbjct: 668 NKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEIN 727
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G +LG EA+ +K LE +P+++ +GI ++ A++
Sbjct: 728 PQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKS 787
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D +N ++ GLAL G+Y++A +A+ K I++D++ E W + + +
Sbjct: 788 FDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIG 847
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E+A++ + + +D +S A++ R L + +++I DL
Sbjct: 848 NYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDL 890
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 41/265 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG A N G Y AI+ +D+ ++ DP PEA +G A + E AI + +AI+
Sbjct: 81 IVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIEL 140
Query: 445 NPS------------------------------AGE-----------AWKRRGQARAALG 463
+P A E AW +G A LG
Sbjct: 141 DPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELG 200
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EAI +KA+E P + +++G+ + ++ AV+ + ++LD +N +
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G ALS + Y++A A+ ++I+LD AW L N E+A++ + + ID +
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
S+A +G L+ +G ++AIK L
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKAL 345
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y AI +++ ++ DP EAL +G A E AI +AI+ NP
Sbjct: 295 GFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQ 354
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G LG EA++ KA E +P + + +G +++ A++
Sbjct: 355 NAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYD 414
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++D ++ + G+ALS++G Y+++ +A KAI+++ + W + L N
Sbjct: 415 KAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNY 474
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A++ + + ID R S A+ +G L+ G+++ I
Sbjct: 475 EGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVI 512
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A G Y ++ +D+ ++ DP Y +A +G + + E AI + +AI+ P
Sbjct: 601 KGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKP 660
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G A EA++ KA+E + + +G D+ A+
Sbjct: 661 QNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAY 720
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ V+++ + A+ G L S+G Y++A A K +++D + AW + L N
Sbjct: 721 NKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGN 780
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++ + L ID + S + +GL L G++++A+K
Sbjct: 781 YEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVK 820
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D ++G A + G Y AI +D+ L+ +P P R A E A+
Sbjct: 525 NLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHN 584
Query: 440 EAIQSNPSAGE-AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
I S+ E +W +G A G E+++ KA+E +P AD +G F K+
Sbjct: 585 REIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKN 644
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L +N A+ GLAL++ Y +A +++ KAI+L+ AW +
Sbjct: 645 YEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKG 704
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
L + E AL + + I+ ++S A++ +G L LG++++A+ + + + PH
Sbjct: 705 NTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNK-TLEIDPH 763
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQI 407
EA NK F + + K+I V+ + +G N G Y A+ FD+
Sbjct: 323 EALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKA 382
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ DP A +G A + + AI + +AI+ +P W +G A + LG E
Sbjct: 383 TELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEE 442
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I+ KA+E +S+ +G+V ++ A++ +++D N A+ G AL
Sbjct: 443 SIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNAL 502
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ GEY+ A KAI+LD L+AW + + L + E+A++ + L I+ +
Sbjct: 503 YNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLT 562
Query: 588 YHLRGLLLHGLGQHKKAI----KDLSSGSRTMMPHLIWN 622
++ R + L +++A+ +++ S S P + WN
Sbjct: 563 WNNREIAFGHLNNYEEALRAHNREIVSDSED--PEVSWN 599
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P A I RG A A + AI+ + +AI+ +P EAW +G A + L EAI+ +K
Sbjct: 77 PIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNK 136
Query: 475 ALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+E +P N L+E G K + ++E ++LD N A+ G AL
Sbjct: 137 AIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSAL 196
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+G Y++A A+ KAI++ + EAW + + N E+A++ + + +D + +
Sbjct: 197 QELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRV 256
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ +G L L +++AI + S + P N W L F
Sbjct: 257 WANKGNALSKLNSYEEAITAYNE-SIELDPQ---NSVAWNGLGF 296
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 98/188 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ +++ ++ +P Y +A +G E A++ F + ++ +P AW +G
Sbjct: 713 YEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKG 772
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A ++LG EA++ KALE + ++ I +G+ F+F + AV+ + +++D+ N
Sbjct: 773 IALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSN 832
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G A IG Y++A + + K I+LD + AW + Y + + E+++ L++
Sbjct: 833 TETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKR 892
Query: 577 VLYIDKRF 584
+ I+ +
Sbjct: 893 AIEINPAY 900
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
L ++I D+ + ++ ++S++T + L L N+ AI+ D +S EI
Sbjct: 436 NLGSYEESIKAFDKAIEIN--LSSSVTWANKGLVLSILGNYEGAIKAFD----KSIEIDP 489
Query: 72 ICNRAFC------YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+ A+ Y+ E ++ VI CDKA++LDP L A+ KG A S+LG EEA+
Sbjct: 490 RNSIAWVNKGNALYNSGE-YEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKA 548
Query: 126 WEKGYE 131
++K E
Sbjct: 549 YDKALE 554
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%)
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ A+ G AL++ G YK+A A+ KAI+LD EAW + +L+N E+A++
Sbjct: 75 ESPIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAY 134
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +D + S ++ +G L+ LG+ +++ K
Sbjct: 135 NKAIELDPQNSLFWYNKGKTLYELGKQEESTK 166
>gi|384207605|ref|YP_005593325.1| hypothetical protein Bint_0109 [Brachyspira intermedia PWS/A]
gi|343385255|gb|AEM20745.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 714
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RGI++ + G AI +++ ++ +P E I RG +++ + AI D+ +A
Sbjct: 66 DAYLNRGISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKA 125
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P+ E + RG ++ L E +I D +KA+E PN I RGI F K +
Sbjct: 126 IELVPNDSEVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHIYFNRGISKFDLKRYRE 185
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + +KL+ AY G + + Y++A E KAI+L+ N + + +L
Sbjct: 186 AIEDYNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKAIELNPNANDVYFNLGLSN 245
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+L +E +V+ ++ + AY LRG+ L ++ AI+D S + + I+
Sbjct: 246 FNLKKYADVIENFNKVIELNPNYKDAYFLRGICKIYLN-NENAIEDFRSFFKINEDNNIY 304
Query: 622 NLT 624
+T
Sbjct: 305 IIT 307
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 122/228 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RGI++ + G AI F++ ++ +P +A + RG +++ + AI D+ ++
Sbjct: 32 DAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGISKSDLGNDKEAIEDYNKS 91
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP E + RG +++ L EAI+D +KA+E PN +++ RG K++ +
Sbjct: 92 IELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDSEVYLNRGASKGYLKEYES 151
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++ D + ++L+ ++ Y G++ + Y++A E + KAI+L+ N+++A+ +
Sbjct: 152 SINDFNKAIELNPNDEHIYFNRGISKFDLKRYREAIEDYNKAIKLNPNYIDAYINRGASK 211
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
DL +A+E + + ++ + Y GL L ++ I++ +
Sbjct: 212 FDLKRYREAIEDFNKAIELNPNANDVYFNLGLSNFNLKKYADVIENFN 259
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 25/213 (11%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI DF AI+ +P+ +A+ RG +++ LG EAI+D ++A+E EP+++D RGI
Sbjct: 14 EEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGI 73
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ED + ++L+ N+ Y Y GL+ S++ Y++A + + KAI+L N
Sbjct: 74 SKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDS 133
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E + G+L ++ + + KA+E +I Y RG+ L ++++A
Sbjct: 134 EVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHI-------YFNRGISKFDLKRYREA 186
Query: 605 IKDLSSGSRTMMPHLI----------WNLTRWR 627
I+D + + + P+ I ++L R+R
Sbjct: 187 IEDYNKAIK-LNPNYIDAYINRGASKFDLKRYR 218
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI F++ +K DP +A + RG +++ + AI DF AI+ P +A+ R
Sbjct: 12 RYEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNR 71
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G +++ LG EAI+D +K++E P + + RG+ K + A++D + ++L
Sbjct: 72 GISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPN 131
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALEC 573
+ Y G + + EY+ + KAI+L+ N + + +++F DL +A+E
Sbjct: 132 DSEVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHIYFNRGISKF--DLKRYREAIED 189
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + ++ + AY RG L ++++AI+D +
Sbjct: 190 YNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKA 227
>gi|124024559|ref|YP_001018866.1| hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
9303]
gi|123964845|gb|ABM79601.1| Hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
9303]
Length = 334
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 118/225 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ GI + G + AI+ F + ++ DP Y A RG A++ ++ + AI+D+ +AI+
Sbjct: 50 VNAGIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEI 109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A++ L + AI D ++A+E P AD RG+ KD+ A+
Sbjct: 110 DPQYARAYFNRGFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIA 169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + +AY GLA G+ + A KAI+++ + A+ + + DL
Sbjct: 170 DYTKAIEINPQYAAAYNNRGLAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDL 229
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ + + I+ + + AY+ RGL L ++ AI D +
Sbjct: 230 KSYQAAIADYNKAIEINPQLAIAYYNRGLAKSDLQDYQAAIADYT 274
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I +D + +R G A+ N Y AI+ + + ++ DP Y A RG A++ ++
Sbjct: 70 TRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEIDPQYARAYFNRGFAKSNLKD 129
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT AI+ NP +A+ RG A+ L + AI D +KA+E P A + RG
Sbjct: 130 YQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIADYTKAIEINPQYAAAYNNRG 189
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D A+ D ++++ + +AY G A + Y+ A + KAI+++
Sbjct: 190 LAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDLKSYQAAIADYNKAIEINPQL 249
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD--- 607
A+ + DL + + A+ + + I+ + S+ Y RG+ G K A D
Sbjct: 250 AIAYYNRGLAKSDLQDYQAAIADYTKAIEINPQLSRVYRNRGITKENNGDLKGACSDYKK 309
Query: 608 -LSSGSRTMMPHLIWNLTRWRNLCFNAW 634
+S G++ T+W N W
Sbjct: 310 AVSLGNQ--------GTTQWLNAKGGTW 329
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G+ G++K A +AI++D + A+G+ +L + + A+ ++ +
Sbjct: 49 YVNAGIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIE 108
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
ID ++++AY RG L ++ AI D +
Sbjct: 109 IDPQYARAYFNRGFAKSNLKDYQGAIADFT 138
>gi|384208241|ref|YP_005593961.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
gi|343385891|gb|AEM21381.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
Length = 617
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 125/226 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ + G + AI ++++++ D +A RG ++ + + + A+ DF +
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KAL+ PN AD + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + +K + ++Y G + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKD 419
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +R A+ G Y +I +D+ + +P Y +A RG A++ E AI D+ E
Sbjct: 363 VDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEE 422
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+I EA+ G A+ L E+I+ KA+E P ++ + RG+ +
Sbjct: 423 SIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYK 482
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---- 556
A++D ++L+ + + Y GL ++G YK+A + + KAI+L N+ A+G+
Sbjct: 483 EAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAIELTPNYTNAYGNRGSA 542
Query: 557 ---LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L Q+ + + + +KA+E Y+ Y+ RG + G +K+A+KD +
Sbjct: 543 KDELGQYKEAIKDYDKAIELEPNTAYL-------YNDRGWVKKNAGLYKEALKDYKK-AL 594
Query: 614 TMMPHLIWNLTRWRNL 629
+ P+ + ++ NL
Sbjct: 595 ELDPNNKYAMSNIENL 610
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 34/262 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG ++ + A+ F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGASKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP+ +A+ RG ++ LG EAI+D + A++++PN + RG V + + +
Sbjct: 286 KALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKD 607
+AY+ RGL + LG +K+AIKD
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKD 487
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 123/238 (51%), Gaps = 10/238 (4%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K ++ ++RG + + Y AI +D+I+K D Y +A R A+ REL
Sbjct: 323 KWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ +I D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +++ ++L AY GL+ + +G YK+A + + K+I+L+ N
Sbjct: 440 AKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDS 499
Query: 552 EAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + LT++ L ++A++ + + + ++ AY RG LGQ+K+AIKD
Sbjct: 500 NTYNNRGLTKY--TLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKD 555
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + AI ++EAI A+ RG AR LG +AI+D KA+E N
Sbjct: 132 GVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKN 191
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
D + RG+ A+ED + ++LD +N AY G + + + + +A +
Sbjct: 192 YKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKDFN 251
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K ++L+ N A+ + DL ++A+E + L I+ F+ AY+ RG LG
Sbjct: 252 KILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLF 311
Query: 602 KKAIKDLSSG 611
K+AI+D ++
Sbjct: 312 KEAIEDYNNA 321
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ +AI+ D ++ + D NRA +L L+K I+D DKA+ L+P AY +G
Sbjct: 345 YEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRG 404
Query: 111 CAFSALGRKEEALSVWEK 128
A S LG EEA+ +E+
Sbjct: 405 LAKSDLGMYEEAIKDYEE 422
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 504 NRGLTKYTLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIE 561
>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
Length = 537
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 116/226 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++GIA + +Y AI +++ + P Y +A +G + AI + E
Sbjct: 215 VDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNE 274
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP EAW +G L + EAI+ ++A+ P + +G V +N
Sbjct: 275 AISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYN 334
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + + ++ + A+ G+AL ++ +Y++A + + +AI ++ F EAW +
Sbjct: 335 EAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFT 394
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L ++A+EC + + I+ +++ A++ +G+ L L Q+++AI+
Sbjct: 395 LNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIE 440
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 122/236 (51%), Gaps = 5/236 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS++ + + +GI N +Y AI +++ + +P +G +
Sbjct: 273 NEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQ 332
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI + EAI NP EAW +G A L + EA + ++A+ P A+ + +G
Sbjct: 333 YNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKG 392
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
F+ A+E + + ++ + SA+ G+ L ++ +Y++A E + +AI ++ +
Sbjct: 393 FTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISINPKY 452
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EAW ++L E+A++C + + I+ +F++A++ +G+ L+ L Q+++AIK
Sbjct: 453 AEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEEAIK 508
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 114/226 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++GI N +Y AI +++ + +P Y EA +G ++ E AI + E
Sbjct: 249 VDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNE 308
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP W +G L + EAI+ ++A+ P A+ + +GI +
Sbjct: 309 AISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYE 368
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A + + + ++ + A+ G L+++ ++ +A E +AI ++ + AW +
Sbjct: 369 EAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGIT 428
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++L E+A+EC + + I+ ++++A++ +G+ L L Q+++AIK
Sbjct: 429 LRNLNQYEEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIK 474
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 377 KSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS++F+ + +G+ V Y AI +++ + +P+ A +G A ++
Sbjct: 70 EAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGYALNDLKQC 129
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI + EAI NP AW +G A L + EAI+ ++A+ P A +GI
Sbjct: 130 EEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGI 189
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+E + + ++ + A+ G+AL + +Y++A E + +AI + ++
Sbjct: 190 TLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYV 249
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+AW G+L Q+ +A+EC + + I+ ++++A++ +G+ L L Q+++A
Sbjct: 250 DAWYNKGITLGNLNQY-------NEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEA 302
Query: 605 IK 606
I+
Sbjct: 303 IE 304
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 111/220 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA N +Y AI +++ + +P A +G + E AI + EAI NP
Sbjct: 153 KGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G A L + EAI+ ++A+ P D + +GI +N A+E
Sbjct: 213 KYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECY 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + A+ Y G+ L ++ +Y++A E + +AI ++ W + +L
Sbjct: 273 NEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQ 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+A+EC + + I+ ++++A++ +G+ L L Q+++A K
Sbjct: 333 YNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFK 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +SV+ ++G A + + AI +++ + +P Y A G+G A
Sbjct: 101 CYNEAISFNPLSVNAWNNKGYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNL 160
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E AI + EAI NP AW+ +G L ++ EAI+ ++A+ P D +
Sbjct: 161 KQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNN 220
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI + A+E + + + + A+ G+ L ++ +Y +A E + +AI ++
Sbjct: 221 KGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINP 280
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ EAW + +L E+A+EC + + I+ + + +G +L L Q+ +AI+
Sbjct: 281 KYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIE 338
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 112/221 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI N + AI +++ + +P Y +A +G A + E AI + EAI +
Sbjct: 186 NKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISIS 245
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G L + EAI+ ++A+ P A+ + +GI + + A+E
Sbjct: 246 PKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIEC 305
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + + G L ++ +Y +A E + +AI ++ + EAW + ++L
Sbjct: 306 YNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLN 365
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A +C + + I+ +F++A++ +G L+ L Q +AI+
Sbjct: 366 QYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIE 406
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 381 VDF-RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
VD+ ++G N +Y AI +++ + +P Y EA +G A + E A +
Sbjct: 316 VDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYN 375
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI NP EAW +G L + EAI+ ++A+ P A + +GI +
Sbjct: 376 EAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQY 435
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + + ++ + A+ G+AL ++ +Y++A + + +AI ++ F EAW +
Sbjct: 436 EEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGI 495
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+L E+A++C + + I+ + A++ +G +
Sbjct: 496 TLNNLNQYEEAIKCYNEAISINPKVDYAWYNQGQFI 531
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A + +Y A +D+ + + A IG+G E AI + EAI
Sbjct: 49 VAKGNALRSLTQYQDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISF 108
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + AW +G A L + EAI+ ++A+ P + +GI K + A++
Sbjct: 109 NPLSVNAWNNKGYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIK 168
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++ ++ SA+ G+ L ++ + ++A E + +AI ++ +++AW + DL
Sbjct: 169 CYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDL 228
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+EC + + I ++ A++ +G+ L L Q+ +AI+
Sbjct: 229 NQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIE 270
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
++ I NP + W +G A A L + EAIQ L++A+ P L +G
Sbjct: 1 MSQPISINPQE-KVWYDKGTALADLNQYQEAIQCLNEAISINPKYEQALVAKGNALRSLT 59
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A + + ++ ++ +A+ GL L + Y++A + + +AI + + AW +
Sbjct: 60 QYQDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNK 119
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
DL E+A+EC + ++I+ ++ A++ +G+ L L Q+++AIK
Sbjct: 120 GYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIK 168
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
EA NK F + +++ +++IS++ + + +GI N +Y AI +++
Sbjct: 386 EAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEA 445
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ +P Y EA +G A + E AI + EAI NP EAW +G L + E
Sbjct: 446 ISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEE 505
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFK 497
AI+ ++A+ P + +G FK K
Sbjct: 506 AIKCYNEAISINPKVDYAWYNQGQFIFKSK 535
>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 607
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ +++ L+ +P + EA R AR F + + AI+D+ A+Q NP E++ RG
Sbjct: 54 YHGAIADYNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRG 113
Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
+A ALG+ AI D +AL+ P + A+ H +G+ D A+ D +
Sbjct: 114 KASKALGDYETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L +AY+ G A +G+Y +A +A++L+ EA+ +L Y L + +
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQ 233
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + L I F+ AY+ RGL+ + ++ +A+ D S
Sbjct: 234 SAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFS 274
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+ + + + R +A+ + G Y AI +D+ L D A GRG ++
Sbjct: 342 TRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQD 401
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D T+AI+ P+ A+ RG AR LG+ AI D ++AL+ P+ + + R
Sbjct: 402 YQRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRA 461
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + KD+ A+ D + ++L+ + + Y+ G A ++ +Y+ A + +AI L+ +F
Sbjct: 462 SIRYALKDYRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSF 521
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ W + + L + + AL L+Q L + +++AY +R + LG +KAI D +
Sbjct: 522 ADDWFNRGRSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA 581
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+++ ++G AI+ F+Q L+ P + A RG A + AI+D +A++
Sbjct: 153 NQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLE 212
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ G A +LG+ AI + ++ALE +P A + RG+V K+++ A+ D
Sbjct: 213 PKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALAD 272
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S VKL+ ++ AY GL SS+G Y+ A + +A+Q + +G + LA
Sbjct: 273 FSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLA 332
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + A+E ++L ++ ++ Y R + LG ++ AIKD
Sbjct: 333 DYQGAIEDSTRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKD 374
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y SAI+ +++ L+ P + A RG A +E + A++DF+EA++ NP
Sbjct: 223 GNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPD 282
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG ++LG AI D +AL+ P + R + D+ A+ED +
Sbjct: 283 DVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDST 342
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ Y +A S+G+Y+ A + + +A+ D N A+ Y+ + +
Sbjct: 343 RLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDY 402
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ Q + I+ FS AY RG LG + AI D +
Sbjct: 403 QRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYN 444
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS--------A 448
Y AI+ +++ L+ +P E+ GRG A + E AI+D+ +A+Q NP
Sbjct: 88 YQGAIADYNRALQINPHLSESYHGRGKASKALGDYETAIADYRQALQINPQLTSYINIDI 147
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
A+ +G +R G++ AI D ++AL+ P+ A RG D++ A+ D +
Sbjct: 148 ANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQ 207
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KL+ + AY LG A S+G+Y+ A + +A+++ F A+ + + + +
Sbjct: 208 ALKLEPKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYD 267
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+AL + + ++ +AY RGL+ LG ++ AI D
Sbjct: 268 QALADFSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIAD 306
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 122/253 (48%), Gaps = 4/253 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I +F +RG+ + +Y A++ F + +K +P +A RG
Sbjct: 235 AIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVH 294
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+ +A+Q NP+ G + R A+ L + AI+D ++ L P A+
Sbjct: 295 SSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEG 354
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+R + D+ A++D + D +AY G+ ++ +Y++A + +AI+
Sbjct: 355 YCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADNTQAIK 414
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF A+ + + L + + A+ Q L I+ F +AY+ R + + L ++ AI
Sbjct: 415 IEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKDYRGAI 474
Query: 606 KDLSSGSRTMMPH 618
D + R + PH
Sbjct: 475 ADYTQALR-LNPH 486
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 116/234 (49%), Gaps = 9/234 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
++G+ + +G++ AI+ + Q ++ DP Y EA R + ++ AI+D+ A+Q
Sbjct: 7 FNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSSGIKDYHGAIADYNRALQ 66
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ EA+ R AR L + AI D ++AL+ P+ ++ H RG + D+ A+
Sbjct: 67 INPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALGDYETAI 126
Query: 504 EDLSACVKLDKENKS--------AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
D ++++ + S AY G++ G+ + A +A+QL +F A+
Sbjct: 127 ADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYS 186
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y L + +A+ Q L ++ + ++AYH G + LG ++ AI + +
Sbjct: 187 NRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQSAIANYN 240
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI+ +DQ L+++P R A+ + + AI D T ++ NP
Sbjct: 290 RGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E + R AR +LG+ AI+D +AL F+ N A + RGIV +D+ A+ D
Sbjct: 350 LLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADN 409
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ AY G A +G+ + A + +A+Q++ +F EA+ + L +
Sbjct: 410 TQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKD 469
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ Q L ++ + Y RG + L ++ AI D +
Sbjct: 470 YRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYN 512
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-RAALGESVEAIQD 471
M E L +G + FQ E E AI+ +T+AI+ +P EA+ R + + + AI D
Sbjct: 1 MKAEDLFNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSSGIKDYHGAIAD 60
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++AL+ PN A+ R + +D+ A+ D + ++++ +Y G A ++G
Sbjct: 61 YNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALG 120
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-DLANS--------------EKALECLQQ 576
+Y+ A + +A+Q++ LT + D+AN+ + A+ Q
Sbjct: 121 DYETAIADYRQALQINP-------QLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L + F+ AY RG H LG + +AI D
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIAD 204
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ +Q LK +P EA G A + ++AI+++ A++
Sbjct: 187 NRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIK 246
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E +A+ D S+A++ P+ ERG+V+ ++ A+ D
Sbjct: 247 PEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIAD 306
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + Y + A + +Y+ A E + ++L+ E + + L
Sbjct: 307 YDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGYCDRAVARRSLG 366
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + A++ + L D + AY+ RG++ + +++AI D
Sbjct: 367 DYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIAD 408
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + Q L+ +P RG A + + AI+D+ +AI PS + W RG
Sbjct: 470 YRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRG 529
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++R+ LG+ A+ DL +ALE +P+ A+ R V D A+ D A L
Sbjct: 530 RSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQASADL 585
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S F RG A Y AI+ ++Q + +P + + RG +R+ +L+ A+ D
Sbjct: 487 SAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRGRSRSLLGDLQGALVDLK 546
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+A++ P EA+ R LG++ +AI D SAD+ +++G
Sbjct: 547 QALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA-------SADLYYKQG 590
>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 1270
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + + G A + F +++K DP EA RG AR +L+ A+ D+T+A+Q
Sbjct: 434 FNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-------PNS-----ADILHERGIV 492
+P G+A+ RG AR ALG+ A++D S+AL P + AD+ +R +
Sbjct: 494 DPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMA 553
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
A+ D ++LD AY GLA +G+ A +A++LD +
Sbjct: 554 YLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALADFNRALELDPQMAK 613
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
A+ + + DL N E AL L Q + +D + + AY RG + LG A++D ++
Sbjct: 614 AYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAAL 673
Query: 613 R--TMMPHLIWN 622
P L +N
Sbjct: 674 ERDPQNPQLYFN 685
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 24/243 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ Y A++ + Q L +P + A RG A + + AI D++ AI+
Sbjct: 366 FNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIEL 425
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG R LG++ A D S+ ++ +P + RG+ + D AVE
Sbjct: 426 NPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVE 485
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI-----------------QLD 547
D + ++LD + AY + GLA ++G+ + A E +A+ Q D
Sbjct: 486 DYTQALQLDPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQAD 545
Query: 548 RNFLEAWGHLTQFYQDLANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A +L+ +N+ E AL +Q L +D S+AY RGL GLG A+
Sbjct: 546 LYLQRAMAYLS------SNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALA 599
Query: 607 DLS 609
D +
Sbjct: 600 DFN 602
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ G A AI+ + Q+++ A RG AR + E A++D+T+A+ NP
Sbjct: 335 RGSARYKSGDLAGAIADYTQVIQL-AGDARAYFNRGIARYRLEDYEGAVADYTQALGLNP 393
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A L + +AI+D S+A+E P RG+V D A D
Sbjct: 394 QWAVAYYNRGNAYRQLNQQQQAIEDYSRAIELNPEDVRAYFNRGVVRGHLGDAQGAAADF 453
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S +K D ++ AY G+A + + + A E + +A+QLD +A+ H Q L +
Sbjct: 454 SEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQLDPRHGKAYYHRGLARQALGD 513
Query: 567 SEKALECLQQVL 578
+ A+E Q L
Sbjct: 514 PQGAVEDFSQAL 525
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + + ++ L RG+A+ G + A++ FDQ L+ DP A RG RA +
Sbjct: 715 IPRGPELLLNAHLRRGMARQRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAALGDGL 774
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAIQDLSKALEFEPNSADILHERG 490
AI D+ +A+ + EA RR ARA + G+ A++ L++A+ +P D+ ER
Sbjct: 775 GAIQDYHQALALGVAVAEADIRRDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERA 834
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + A+ D ++ D ++ +A+ G+A +G + A + + +Q D +
Sbjct: 835 ELCRQLGRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDH 894
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL------GQHKKA 604
EA H Q Q L +E AL+ L ++L D + A RG LL L G +A
Sbjct: 895 REALWHRGQALQQLGQTEAALQDLNRLLQRDPQHRMARLARGSLLLTLAVRGTDGPTNRA 954
Query: 605 IKDLSSGSRTM 615
+D SG+ ++
Sbjct: 955 EQDRVSGTESL 965
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ R +A Q + + AI+D T AIQ +P A+ +RG AR G+ AI D ++ ++
Sbjct: 298 LLARAQEKARQGDFQGAIADCTLAIQLDPQNSRAYSQRGSARYKSGDLAGAIADYTQVIQ 357
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A RGI ++ +D+ AV D + + L+ + AY G A + + ++A
Sbjct: 358 LA-GDARAYFNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAI 416
Query: 538 EAHLKAIQLDRNFLEAW-------GHLTQFY--------------QD------------- 563
E + +AI+L+ + A+ GHL QD
Sbjct: 417 EDYSRAIELNPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQ 476
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L++ + A+E Q L +D R KAY+ RGL LG + A++D S
Sbjct: 477 LSDLQGAVEDYTQALQLDPRHGKAYYHRGLARQALGDPQGAVEDFS 522
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 15/285 (5%)
Query: 317 SLNDSNTNSESYSKS-SISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKFCVT 371
+L D E +S++ S+ ++++ E+ ++ L + M +SN + C
Sbjct: 510 ALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLEPALADCEQ 569
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+ ++S + L RG+A+ G A++ F++ L+ DP +A + RG A +
Sbjct: 570 ALRLDPNLSRAY-LCRGLARQGLGDPGGALADFNRALELDPQMAKAYLNRGIAHLDLGNI 628
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA+SD +AI +P A+ RG+ LG+ + A++D + ALE +P + + RG
Sbjct: 629 EAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRGQ 688
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENK---------SAYTYLGLALSSIGEYKKAEEAHLK 542
++ + +D+ AA ED S ++ +A+ G+A +G+++ A +
Sbjct: 689 LHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGALADFDQ 748
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
A+Q D A+ H Q L + A++ Q L + ++A
Sbjct: 749 ALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEA 793
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 9/239 (3%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ D L R +A ++ A++ +Q L+ DP A + RG AR + A++D
Sbjct: 541 AAQADLYLQRAMAYLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALAD 600
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F A++ +P +A+ RG A LG A+ DL++A+ +P A RG +++
Sbjct: 601 FNRALELDPQMAKAYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLG 660
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ------LDRN-- 549
D AA+ D +A ++ D +N Y G + ++ A E + +Q + R
Sbjct: 661 DPLAALRDYTAALERDPQNPQLYFNRGQLHAEREDWPAACEDFSQVLQWAARPGIPRGPE 720
Query: 550 -FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L A Q L + + AL Q L D + AY RG + LG AI+D
Sbjct: 721 LLLNAHLRRGMARQRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQD 779
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 26/260 (10%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKY--ASAISIFDQILK----EDP--MYPEALIGRGTARA 426
+S+ + ++ L R AQV ++ AI+ +D++L+ DP + EAL+ RG R
Sbjct: 990 QSRQLYLEAHLKR--AQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQ 1047
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-----PN 481
+ +L A++DFT IQ P A +A+ R ALG+ A+ DL +AL + N
Sbjct: 1048 ERGDLAGALADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVAN 1107
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A +RG ++ + A+ D + + L+ + SA + L G+ KA E +
Sbjct: 1108 AALAYRQRGDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKAIEDYT 1167
Query: 542 KAIQLDRNFLE--------AWGHLTQ--FYQDLANSEKALE-CLQQVLYIDKRFSKAYHL 590
+ +QL+ + E W + Q F + + ++A+ C D KA+
Sbjct: 1168 RLLQLELDPQERVWVLNNRGWAYAQQGDFSAAIRDYDQAITLCTADASDRDPCHLKAHFN 1227
Query: 591 RGLLLHGLGQHKKAIKDLSS 610
R L LG ++A +D +
Sbjct: 1228 RALARTALGDWQRACQDFQA 1247
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
RA Y + + DC++AL+LDP L +AY+ +G A LG AL
Sbjct: 549 QRAMAYLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGAL---------- 598
Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLT-VSES-GLNANDKMSETSEN 191
AD + LEL+ + A +R + D+ N ++L+ ++++ L+ D + +S
Sbjct: 599 ----ADFNRALELDPQMAKAYLNRGI-AHLDLGNIEAALSDLNQAIALDPQDASAYSSRG 653
Query: 192 HNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
+ D + RD + + +P L R
Sbjct: 654 RIHWLLGDPLAALRDYTAALERDPQNPQLYFNRG 687
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ ++S D RG ++ AI ++Q +K +P++ A R +
Sbjct: 625 ALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPLFKFAYNVRSFSY 684
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+D T+AIQ +P ++ RG L E ++I D ++A++ +P +A
Sbjct: 685 VELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEYKQSIADSTQAIQLDPKNAKY 744
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI K++ A+ D + ++LD +N Y G+A S + +YK+ + +AIQ
Sbjct: 745 YNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYTQAIQ 804
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD +G Y +L + ++A+ Q + +D + + Y LRGL L +K+AI
Sbjct: 805 LDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAI 864
Query: 606 KDLSSGSR 613
DL+ R
Sbjct: 865 SDLTETIR 872
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 2/221 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + +Y AI+ + Q +K DP GRG A F + + AI ++TEAI+ +P
Sbjct: 1013 RGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDP 1072
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A L E AI D ++A++ +P +A RG + KD+ A+ D
Sbjct: 1073 K--KIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDY 1130
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD +N Y G A + +YK A + +AI++D + Y L +
Sbjct: 1131 THAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKD 1190
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A++ Q + + F++AY++RG+ + L +K+AI D
Sbjct: 1191 HKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDD 1231
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 10/284 (3%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
+ Y+++ D+++++S R+ + +K K+ ++ + V +I + +
Sbjct: 926 DDYTQAIKIDSQNANSYAIRAGIYYKLKEYKQAIDDYNQ-----VIQIDPQNAT---YYG 977
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y AI+ + Q++K DP RG +E AI+D+T+AI+ +
Sbjct: 978 ARGFAYFKLKEYKQAINDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKID 1037
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A L + +AI + ++A++ +P I++ RG + K++ A++D
Sbjct: 1038 PKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKK--IINLRGAAYLQLKEYKLAIDD 1095
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD +N Y G A + +YK+A + AIQLD +G Y L
Sbjct: 1096 YNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLK 1155
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q + ID + + Y RG L HK+AI D +
Sbjct: 1156 DYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYT 1199
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y AI+ + ++ DP RG A ++ + AI+D+T+AI+ +
Sbjct: 1112 TRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKID 1171
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A L + +AI D ++A++ +P+ + + RGI ++ KD+ A++D
Sbjct: 1172 PKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDD 1231
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL + AYT LG+ +GE + A AI+++ NF EA L
Sbjct: 1232 WNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSNFAEAHLALGVALYGKG 1291
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ E L+ + L +DKR+ K L+ +G G+ K IKD
Sbjct: 1292 DQEAGLKSAETALKLDKRYGKIEFLKE---NGWGE--KLIKD 1328
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG-RGTARAFQRELEAAISDF 438
+ ++ RGIA Y AI + + +K DP + +I RG A +E + AI D+
Sbjct: 1040 NANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDP---KKIINLRGAAYLQLKEYKLAIDDY 1096
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AIQ +P + RG A L + +AI D + A++ +P +A RG + KD
Sbjct: 1097 NQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKD 1156
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ D + +K+D +N + Y+ G A + ++K+A + + +AI+L +F EA+
Sbjct: 1157 YKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRG 1216
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L + ++A++ Q + + + +AY G++ + +G+ + AI
Sbjct: 1217 IAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGEVETAI 1263
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KYA A ++ + + P + +A +G +++ +I+ + +A++ NP+ +AWK R
Sbjct: 553 KYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPNFAQAWKDR 612
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L + EA+ KA+ PN D+ + RG K F A+E + +K++
Sbjct: 613 GRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPL 672
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLAN 566
K AY + + Y++A +AIQLD R L +G L ++ Q +A+
Sbjct: 673 FKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLL--YGQLEEYKQSIAD 730
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
S +A++ +D + +K Y+ RG+ GL ++K+AI D +
Sbjct: 731 STQAIQ-------LDPKNAKYYNSRGIAYEGLKEYKQAINDYT 766
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSIS--VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPM 413
+N+ R++K+ R + +K+I+ DF + +G+ +E KY +I+ +D+ LK +P
Sbjct: 545 ANQLWRSQKYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPN 604
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ +A RG + A++ F +AI +P+ + + RG L EAI+ +
Sbjct: 605 FAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYN 664
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++++ P + R + K++ A+ DL+ ++LD ++ +Y + GL + EY
Sbjct: 665 QSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEY 724
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
K++ +AIQLD + + Y+ L ++A+ Q + +D + +K Y+ RG+
Sbjct: 725 KQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGI 784
Query: 594 LLHGLGQHKKAIKDLS 609
L +K+ I D +
Sbjct: 785 AYSQLKDYKQVIADYT 800
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++S +FR G+ +Y +I+ Q ++ DP + RG A +E + AI+D
Sbjct: 708 AVSYNFR---GLLYGQLEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAIND 764
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T+AIQ +P + + RG A + L + + I D ++A++ +P A RG + K
Sbjct: 765 YTQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELK 824
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------- 547
D+ A+ D + ++LD ++ Y+ GLA S + +YK+A + I+ D
Sbjct: 825 DYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNAPYTMQG 884
Query: 548 ---------RNFLEAW-GHLTQFYQ-------DLANSEKALECLQQVLYIDKRFSKAYHL 590
+ FL + G ++ Y+ +L + A++ Q + ID + + +Y +
Sbjct: 885 LRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAI 944
Query: 591 RGLLLHGLGQHKKAIKDLS 609
R + + L ++K+AI D +
Sbjct: 945 RAGIYYKLKEYKQAIDDYN 963
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y AI + Q +K D + R +E + AI D+ + IQ +
Sbjct: 910 TRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQID 969
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A L E +AI D S+ ++F+P A RG K++ A+ D
Sbjct: 970 PQNATYYGARGFAYFKLKEYKQAINDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAIND 1029
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDL 564
+ +K+D +N + Y+ G+A + +YK+A + + +AI++D + + G Y L
Sbjct: 1030 YTQAIKIDPKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKKIINLRGAA---YLQL 1086
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
+ A++ Q + +D + + Y RG L +K+AI D + + + I+ T
Sbjct: 1087 KEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGT 1146
Query: 625 R 625
R
Sbjct: 1147 R 1147
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A Y AI+ + Q ++ DP RG A + ++ + AISD TE I+ +P
Sbjct: 816 RGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDP 875
Query: 447 SAGE---------------------------AWKRRGQARAALGESVEAIQDLSKALEFE 479
++ RG L E AI D ++A++ +
Sbjct: 876 KNAPYTMQGLRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKID 935
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+A+ R + +K K++ A++D + +++D +N + Y G A + EYK+A
Sbjct: 936 SQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLKEYKQAIND 995
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ I+ D +G Y +A+ Q + ID + + Y RG+ H L
Sbjct: 996 WSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLE 1055
Query: 600 QHKKAIKDLSSGSRTMMPHLIWNL 623
+K+AI + + + + P I NL
Sbjct: 1056 DYKQAIDNYTEAIK-IDPKKIINL 1078
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AI+ LD A+ Y +R YSQL+ +K VI D +A+QLDP Y
Sbjct: 761 AINDYTQAIQ-LDPKNAKYYN-----SRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYG 814
Query: 108 LKGCAFSALGRKEEALS 124
++G A+S L ++A++
Sbjct: 815 MRGGAYSELKDYKQAIA 831
>gi|296125246|ref|YP_003632498.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296017062|gb|ADG70299.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 349
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ N GKY A+ F+ LK D + +G + + AI D+T++I+ +
Sbjct: 42 RGLAKSNLGKYKEALDDFNTALKLDNNNADIYYNKGVTEYHMGDYDKAIEDYTKSIELDN 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + + RG +ALG+ +AI+D + A+E + + RG+ +DF +A++D
Sbjct: 102 SIDDVYNNRGLCYSALGDFEKAIEDFTYAIELNNEDSQYYYNRGLAKDNLEDFESALDDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE--EAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + +AY G A + + Y + + + + KAI+LD N + A + +Y
Sbjct: 162 DKAIEINPKYSNAYNNRGNAKAELN-YDEEDIIKDYDKAIELDNNNINAHFNKALYYDIN 220
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N E+AL Q+L ID+ + + Y R L+L+ L ++ ++IKD
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKD 263
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 425 RAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
AF E E AI + I N + RG A++ LG+ EA+ D + AL+ + N+A
Sbjct: 11 EAFDNEDYENAIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTALKLDNNNA 70
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
DI + +G+ + D++ A+ED + ++LD Y GL S++G+++KA E A
Sbjct: 71 DIYYNKGVTEYHMGDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSALGDFEKAIEDFTYA 130
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
I+L+ + + + +L + E AL+ + + I+ ++S AY+ RG
Sbjct: 131 IELNNEDSQYYYNRGLAKDNLEDFESALDDYDKAIEINPKYSNAYNNRG 179
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F +D+ A+E + + +N+ Y Y GLA S++G+YK+A + A++LD N +
Sbjct: 13 FDNEDYENAIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTALKLDNNNADI 72
Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +T+++ + + +KA+E + + +D Y+ RGL LG +KAI+D +
Sbjct: 73 YYNKGVTEYH--MGDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSALGDFEKAIEDFT 128
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI+ K + + ++ + + RG+ + A++D + +KLD N Y G+
Sbjct: 21 AIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTALKLDNNNADIYYNKGVTE 80
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+G+Y KA E + K+I+LD + + + + Y L + EKA+E + ++ S+
Sbjct: 81 YHMGDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSALGDFEKAIEDFTYAIELNNEDSQY 140
Query: 588 YHLRGLLLHGLGQHKKAIKD 607
Y+ RGL L + A+ D
Sbjct: 141 YYNRGLAKDNLEDFESALDD 160
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 50 RNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
N+ +A+ I + LL Y I+ NRA +L + I+DCDKA++LD Y+
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDCDKAIELDSKYWLLYLN 280
Query: 109 KGCAFSALGRK---------EEALSVWEKGYEHALHQSADLKQF 143
+ + +K +E +K YE AL +L +F
Sbjct: 281 RAEIKLEVAKKNIDDFKKLNDEVFEDIKKSYELALEDEDNLNEF 324
>gi|334322164|ref|XP_003340195.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
13-like [Monodelphis domestica]
Length = 852
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNPSAGEA 451
+ +A+ F ++ E+P A+ GRG A + Q + E A+ + + I P E
Sbjct: 151 FINALLCFCFLVXEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEPDRPEV 210
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++
Sbjct: 211 FEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLE 269
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A
Sbjct: 270 LNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAAT 329
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 330 ESFQRALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 366
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 227 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 286
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 287 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALLLNQNHVQTL 346
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 347 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 404
>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+SI F+ R ++ GKY A +IF ++++ DP +A G A +Q +L+ AI
Sbjct: 26 SQSIDQLFQQGRTAGKM--GKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAI 83
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ + +AIQ NP+ +A+ G A + G+ EAI KA++ PN AD + GI
Sbjct: 84 AAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSD 143
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ ++L+ AY LG+ALS G+ ++A A+ KAIQL+ N+ +A+
Sbjct: 144 QGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYY 203
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L D ++A+ Q+ + +D + AY+ G L+ G+ ++AI
Sbjct: 204 NLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAI 253
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 117/224 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + GIA ++GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +A
Sbjct: 132 DAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKA 191
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ G A G+ EAI KA++ +PN A+ + G +K
Sbjct: 192 IQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEE 251
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++L+ AY LG+ALS G+ +A A+ KAIQL+ N EA+ +L
Sbjct: 252 AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVAL 311
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D ++A+ Q+ + ++ F+ AY+ G+ L G+ +AI
Sbjct: 312 SDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAI 355
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++GK AI+ + + ++ +P Y +A G A + Q +LE AI+ + +AIQ NP+
Sbjct: 104 GNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 163
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A + G+ EAI KA++ PN AD + G F + A+
Sbjct: 164 FTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQ 223
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD + +AY LG AL G+ ++A A+ KAIQL+ N EA+ +L D
Sbjct: 224 KAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKR 283
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + ++ ++AY+ G+ L G+ +AI
Sbjct: 284 DEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAI 321
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA ++GK AI+ + + ++ +P Y +A G A Q +L+ AI+ + +AIQ +P+
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA++ PN A+ + G+ + A+
Sbjct: 232 DANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 291
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L D
Sbjct: 292 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKR 351
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + ++ F+ AY+ G+ L G+ +AI
Sbjct: 352 DEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAI 389
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + G A ++GK AI+ + + ++ DP A G A Q +LE AI+ + +A
Sbjct: 200 DAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKA 259
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ EA+ G A + G+ EAI KA++ PN A+ + G+ +
Sbjct: 260 IQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDE 319
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L
Sbjct: 320 AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVAL 379
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D ++A+ Q+ + ++ F+ AY+ G+ L G+ +AI
Sbjct: 380 SDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAI 423
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPM 413
S++ KR++ + K+I ++ L+ G+A ++GK AI+ + + ++ +P
Sbjct: 278 SDQGKRDEAIAAYQ----KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A G A + Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA++ PN A + G+ + A+ ++LD + +AY LGLAL + G+
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A A+ KAIQL+ NF A+ +L E+A+ Q+ + ++ F+ AY+ G
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGN 513
Query: 594 LLHGLGQHKKAI 605
L G+ +AI
Sbjct: 514 ALSDQGKRDEAI 525
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +GK AI+ + + ++ +P EA G A + Q + + AI+ + +AIQ NP+
Sbjct: 240 GAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 299
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ G A + G+ EAI KA++ PN A + G+ + A+
Sbjct: 300 LAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 359
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L ++
Sbjct: 360 KAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKR 419
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + +D + AY+ GL L G+ +AI
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAI 457
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A ++GK AI+ + + ++ +P +
Sbjct: 312 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFA 369
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A + Q + + AI+ + +AIQ NP+ A+ G A G+ EAI KA
Sbjct: 370 LAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKA 429
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +PN A+ + G+ + A+ ++L+ AY LG AL S G+ ++
Sbjct: 430 IQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREE 489
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D ++A+ Q+ + ++ F+ AY+ G L
Sbjct: 490 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 549
Query: 596 HGLGQHKKAI 605
G+ +AI
Sbjct: 550 SDQGKLNEAI 559
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ +P EA G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A + G+ EAI KA++ PN A + G+ + A+
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+AL + G+ +A A+ KAIQLD N A+ +L ++
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + ++ F+ AY+ G L+ G+ ++AI
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAI 491
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A ++GK AI+ + + ++ +P +
Sbjct: 346 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFA 403
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ +P+ A+ G A G+ EAI KA
Sbjct: 404 LAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKA 463
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 464 IQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDE 523
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D +A+ Q+ + ++ F+ AY+ G L
Sbjct: 524 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNAL 583
Query: 596 HGLGQHKKAI 605
G+ +AI
Sbjct: 584 KDQGKLNEAI 593
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A N+GK AI+ + + ++ DP
Sbjct: 380 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDA 437
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI KA
Sbjct: 438 NAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKA 497
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 498 IQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNE 557
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A + KAIQL+ NF A+ +L +D +A+ Q+ L
Sbjct: 558 AIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 600
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 369 CVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ ++ +F L+ G A ++GK AI+ + + ++ +P + A G A
Sbjct: 490 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 549
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE------ 479
+ Q +L AI+ + +AIQ NP+ A+ G A G+ EAI KAL
Sbjct: 550 SDQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVT 609
Query: 480 PNSADIL--HERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P +A L + G+V A+ + A +K+D +
Sbjct: 610 PTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKIDPK 647
>gi|386828172|ref|ZP_10115279.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
gi|386429056|gb|EIJ42884.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
Length = 613
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
SD+TE +WD+ T K + ++ + + + + L RG+A +
Sbjct: 190 SDNTE-------RWDIALATLTHYKEELE-TFDKVIQLQPDNAEAWLGRGVALRALTRDE 241
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI FD++++ P EA RG A + E AI F + IQ P E W +G A
Sbjct: 242 DAIEAFDKVIQLQPDNAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYA 301
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
AL EAI+ +KA++ +P++A+I RGI + A+E ++ + +
Sbjct: 302 LNALTRYEEAIKAFNKAVQLQPDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLAT 361
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLTQFYQDLANSEKAL 571
A++ G+AL Y++A E+ KAIQ + + AW HL ++ + + + +KA+
Sbjct: 362 AWSSRGVALFHSARYEEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAI 421
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EC F+ A++ RG++L+ L ++K++++
Sbjct: 422 EC-------KPDFADAWNNRGIVLNYLARYKESVE 449
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A + +Y AI FD++++ P P+A + RG A +AA +F + ++
Sbjct: 27 LQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFALGVLTHYQAATENFDKTVKL 86
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+AW G R L A++D K ++ +PN+A +RG + A+E
Sbjct: 87 QADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAWLDRGFALGALNRYEEAIE 146
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
+ +KL +N A+ +AL+++ Y++A E KA QL + E W LT +
Sbjct: 147 SFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQLQSDNTERWDIALATLTHY 206
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ LE +V+ + ++A+ RG+ L L + + AI+
Sbjct: 207 KEE-------LETFDKVIQLQPDNAEAWLGRGVALRALTRDEDAIE 245
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y AI FD++++ P E +G A E AI F +A+Q
Sbjct: 263 NRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFNKAVQLQ 322
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A + L EAI+ KA++F+P+ A RG+ F + A+E
Sbjct: 323 PDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARYEEAIES 382
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + +A+ GLAL + Y++A E++ KAI+ +F +AW + LA
Sbjct: 383 CDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIECKPDFADAWNNRGIVLNYLA 442
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL-GQHKKAIKDLSSGSRTMMP-HLI 620
++++E +V+ + + A+ G+ L L G I ++ + + + P HL+
Sbjct: 443 RYKESVESFDKVIQLKPNDALAWSNYGVSLWRLSGLPTTKIAEVFARALAIQPNHLL 499
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + + + D L RG A Y +A FD+ +K +A G R
Sbjct: 45 CFDKVIQLQPNNPDAWLQRGFALGVLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVL 104
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A+ D + IQ P+ AW RG A AL EAI+ +K ++ + ++AD E
Sbjct: 105 SHYERALEDSDKIIQLQPNNATAWLDRGFALGALNRYEEAIESFNKVIKLQIDNADAWEE 164
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + A+E+ + +L +N + +AL+++ YK+ E K IQL
Sbjct: 165 SRVALATLTHYEEALENFNKAYQLQSDNTERW---DIALATLTHYKEELETFDKVIQLQP 221
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ EAW + L E A+E +V+ + ++A+H RG L L ++++AI+
Sbjct: 222 DNAEAWLGRGVALRALTRDEDAIEAFDKVIQLQPDNAEAWHNRGNALSILTRYEEAIE 279
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + IQ P EAW +RG A AL EAI+ K ++ +PN+ D +RG
Sbjct: 9 IDTLDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFALG 68
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ AA E+ VKL +N A+ Y G+ + Y++A E K IQL N AW
Sbjct: 69 VLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAW 128
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L E+A+E +V+ + + A+ + L L +++A+++ +
Sbjct: 129 LDRGFALGALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKA 185
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I D++++ P EA + RG+A E AI F + IQ P+ +AW +RG A
Sbjct: 9 IDTLDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFALG 68
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L A ++ K ++ + ++ G+ + A+ED ++L N +A+
Sbjct: 69 VLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAW 128
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL ++ Y++A E+ K I+L + +AW L + E+ALE
Sbjct: 129 LDRGFALGALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALE-------- 180
Query: 581 DKRFSKAYHLR 591
F+KAY L+
Sbjct: 181 --NFNKAYQLQ 189
>gi|384208243|ref|YP_005593963.1| hypothetical protein Bint_0754 [Brachyspira intermedia PWS/A]
gi|343385893|gb|AEM21383.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 420
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + K+ + D+ + RG+ + + G AI FD+ L DP +A +G
Sbjct: 149 KEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGL 208
Query: 424 AR---AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
F +E AI DF++AI+ NP+ A+ RG A+ LG EAI+D KA++ P
Sbjct: 209 LEDELGFSKE---AIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNP 265
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG + A+ED + +KL +N AY G ++ Y++A + +
Sbjct: 266 NYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDY 325
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+LD N+ A+ + +L E+A+E + + + ++ AY+ RGL LG
Sbjct: 326 DKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGL 385
Query: 601 HKKAIKD 607
+++A+KD
Sbjct: 386 YEEALKD 392
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +KL+ AY G+A ++G Y++A + + KAI+L+ N+ A+ +L
Sbjct: 223 FSKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+E + + + + AY+ RG + L +++AIKD
Sbjct: 283 LYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKD 324
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F + +K +P Y A RG A+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D +KA++ +P++ D + RG
Sbjct: 251 EEAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGN 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A++D +KLD AY G A ++G Y++A E KAI+L ++
Sbjct: 311 TKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYA 370
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
+A+ + ++L E+AL+ ++ L +D
Sbjct: 371 DAYNNRGLTKENLGLYEEALKDYKKALKLD 400
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D SKA++ PN A + RGI +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D +KL+ AY G A ++G Y++A E KAI+L + +A+ +
Sbjct: 252 EAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNT 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+L E+A++ + + +D ++ AY+ RG LG +++AI+D
Sbjct: 312 KYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDF 359
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G ++ E AI + EAI+ NP+ +A+ + A+ LG EAI++ KA+E
Sbjct: 104 KGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRA 163
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG++ A++D + +D AY GL +G K+A +
Sbjct: 164 DYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDF 223
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+L+ N+ A+ + +L E+A++ + + ++ ++ AY+ RG LG
Sbjct: 224 SKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLGL 283
Query: 601 HKKAIKDLS 609
+++AI+D +
Sbjct: 284 YEEAIEDFN 292
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K + D +RG + N Y AI +D+ +K DP Y A RG A+ E A
Sbjct: 296 KLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEA 355
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
I DF +AI+ P +A+ RG + LG EA++D KAL+ +P+S
Sbjct: 356 IEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPSS 403
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 51/203 (25%)
Query: 424 ARAFQRELEAAISD-------FTEAIQS----------NPSAGEAWKRRGQARAALGESV 466
A+AF EL +SD FT + + N + + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKQNFIVSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I A T LGL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAI---------------------------AKTKLGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY+ +GLL LG K+AIKD S
Sbjct: 202 AYNNKGLLEDELGFSKEAIKDFS 224
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKA 226
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++SKAI+ L+ A +Y NR L L++ I+D DKA++L+P AY
Sbjct: 219 AIKDFSKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ + K
Sbjct: 273 SRGNAKDNLGLYEEAIEDFNKA 294
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL++ I+D DKA++LDP AY +G A LG EEA+ ++K
Sbjct: 307 NRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I D L +Y N+ +L K I+D KA++L+P AY
Sbjct: 185 AIKDFDKALSI-DPNLFDAYN-----NKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYN 238
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 239 NRGIAKDNLGLYEEAIKDYDKA 260
>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
Length = 714
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G + AIS F Q LK D RGTA ++ E AI+DF +AI+ N
Sbjct: 363 NRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAITDFNKAIEEN 422
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG+A A + +A++D SKA++ P + RG + ++ A+ D
Sbjct: 423 PNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKAIAD 482
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ AY+ GLA S +GEY KA E + KA+ ++ + + A+ + + +
Sbjct: 483 FSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMG 542
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
KA + + L I+ FS AY R L G A+ D++
Sbjct: 543 EIHKAFDDYNKALQINPNFSHAYANRANLFLQTGNLNSAMTDIA 586
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A G A+ + L D +A G A + + E AI ++ AI+
Sbjct: 294 VNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFEKAIGAYSNAIEF 353
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + + RG+A G EAI D ++AL+ + + A+ ++RG + K++ A+
Sbjct: 354 DPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAIT 413
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++ + A+ G A + + KA E + KAI ++ F A+ + Y
Sbjct: 414 DFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGN 473
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+KA+ +++ I+ S AY RGL G+G++ KAI+D
Sbjct: 474 GFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIED 516
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
IL Y + RG A +++ A+ + A+ + +A+ G A + G
Sbjct: 282 ILTLRQYYSSDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFE 341
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+AI S A+EF+P + + RG FK F+ A+ D + +K+D+ + + Y G A
Sbjct: 342 KAIGAYSNAIEFDPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTA 401
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
Y++A KAI+ + N A+ + + ++ + KALE + + I+ F
Sbjct: 402 WLEKKNYEQAITDFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFES 461
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY+ RG L G G + KAI D S
Sbjct: 462 AYNNRGNLYLGNGFYDKAIADFS 484
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y AI+ F ++++ +P +A RG A + E AI D+ +A+
Sbjct: 465 NRGNLYLGNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIE 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A +GE +A D +KAL+ PN + R + + + N+A+ D
Sbjct: 525 PSNIHAYVNRGVAWVHMGEIHKAFDDYNKALQINPNFSHAYANRANLFLQTGNLNSAMTD 584
Query: 506 LSACV 510
++ +
Sbjct: 585 IAFAM 589
>gi|427739440|ref|YP_007058984.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
gi|427374481|gb|AFY58437.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
Length = 1173
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 111/243 (45%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + ++ F +RG AQ + Y AI+ + + + P RG Q++ +
Sbjct: 910 IGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQ 969
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+DFT AI+ NP A+ +RG A + AI D +KA+ EPN RG V
Sbjct: 970 QAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYSNRGGV 1029
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K + A++D +A ++L++EN SAY+ +A +YK A H +AI +
Sbjct: 1030 YLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIADHTEAIGIKPKEAR 1089
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ Y KA+ + +D AY LR L GLG +KAI+DL S
Sbjct: 1090 YYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAYAGLGDKQKAIQDLQKAS 1149
Query: 613 RTM 615
+
Sbjct: 1150 QIF 1152
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 387 RGIAQVNEGKYASAISIF-DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A G A I+ + D I + E RG R Q++ A++D+T+A+
Sbjct: 786 RGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQALSFR 845
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A+ RG+A A LG+ +++QD +KAL +P ++ I RG KD+ A VED
Sbjct: 846 SSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVED 905
Query: 506 LSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + L + AY + G A YK A + KAI L + + Y
Sbjct: 906 YNKAIGLTPQ--LAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYL 963
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ + ++ ++ AY+ RG+ L +K AI D +
Sbjct: 964 TQKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYT 1010
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 1/232 (0%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+S V + RG A GK ++ F++ L P RG +R ++ +A +
Sbjct: 845 RSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVE 904
Query: 437 DFTEAIQSNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+ +AI P A + RG A+ AI D +KA+ +P A RG V
Sbjct: 905 DYNKAIGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLT 964
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
K + A+ D +A ++L+ + SAY G+AL +YK A + KAI L+ N +
Sbjct: 965 QKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYS 1024
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ Y ++A++ + +++ + AY +R + +K AI D
Sbjct: 1025 NRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIAD 1076
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 3/217 (1%)
Query: 363 KRNKKFCVTRISKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ N K + +K+ S+ F +RG + + +Y AI+ F ++ +P Y A
Sbjct: 931 QENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQQAIADFTAAIRLNPDYASAYN 990
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A ++ + AI+D+T+AI P+ G + RG + +AI D + A+
Sbjct: 991 KRGIALEHGKDYKGAIADYTKAISLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLN 1050
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+A R I +D+ A+ D + + + + Y G EY+KA
Sbjct: 1051 QENASAYSIRAIARDMQEDYKGAIADHTEAIGIKPKEARYYNRRGNTYLKNKEYRKAIAD 1110
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ AI LD + +A+G + Y L + +KA++ LQ+
Sbjct: 1111 YTTAISLDVDDGDAYGLRSLAYAGLGDKQKAIQDLQK 1147
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 5/260 (1%)
Query: 359 SNEAKRNKKF--CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPM 413
NE R++++ + +S I DF S G+A + + KY AI F K +P
Sbjct: 549 GNELWRSRRYKEAQSAFERSTKIKPDFYHGWYSHGMALMRQEKYPEAIKSFKLANKYNPE 608
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
AL G A + E A+ F + IQ P A LG EA+Q +
Sbjct: 609 SDRALRQLGDAYWYSGEYPEALQTFKQTIQLRPDDFILHNWLADAFNQLGRHPEALQAGN 668
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++++ PN A+ R D++ A++DL+ +KL + AY L +Y
Sbjct: 669 QSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYWQKDY 728
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++A AI+L NF++A+ + + N E ++ + L I + Y RG
Sbjct: 729 QEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQPDNAVIYAQRGY 788
Query: 594 LLHGLGQHKKAIKDLSSGSR 613
+ LG K I D + R
Sbjct: 789 AHYLLGDTAKGIADYNDAIR 808
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G Y+ AI ++ LK P A + R R +Q++ + A++D AI+ P+ +A+
Sbjct: 690 NLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYWQKDYQEALNDTKTAIRLQPNFVDAY 749
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G A + I+D +KAL+ +P++A I +RG ++ D + D + ++L
Sbjct: 750 WVSGLVHAQMNNREGFIKDFNKALQIQPDNAVIYAQRGYAHYLLGDTAKGIADYNDAIRL 809
Query: 513 D-KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ K YT G +Y A + +A+ + + A+ + Y L +++L
Sbjct: 810 NSKLAYEFYTQRGDIRWIQKDYNGAVADYTQALSFRSSHVPAYIGRGKAYAKLGKRQQSL 869
Query: 572 ECLQQVLYIDKRFSKAYHLRG---LLLH----GLGQHKKAIKDLSSGSRTMMPHLIWN 622
+ + L + + S Y RG LLL G+ + KAI G + +L +N
Sbjct: 870 QDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVEDYNKAI-----GLTPQLAYLFYN 922
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 7/219 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ A+ +Q ++ +P E+ I R R+ + AI D +A++ P A+ +
Sbjct: 658 GRHPEALQAGNQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQ 717
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R R + EA+ D A+ +PN D G+V+ + + ++D + +++
Sbjct: 718 RALVRYWQKDYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQP 777
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN----FLEAWGHLTQFYQDLANSEKA 570
+N Y G A +G+ K + AI+L+ F G + +D A
Sbjct: 778 DNAVIYAQRGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDY---NGA 834
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Q L AY RG LG+ +++++D +
Sbjct: 835 VADYTQALSFRSSHVPAYIGRGKAYAKLGKRQQSLQDFN 873
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R + A S F + + P W G A + EAI+ A ++ P S L +
Sbjct: 556 RRYKEAQSAFERSTKIKPDFYHGWYSHGMALMRQEKYPEAIKSFKLANKYNPESDRALRQ 615
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G + ++ A++ ++L ++ + +L A + +G + +A +A ++IQL+
Sbjct: 616 LGDAYWYSGEYPEALQTFKQTIQLRPDDFILHNWLADAFNQLGRHPEALQAGNQSIQLNP 675
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E++ ++ +L + +A++ L + L + + AY R L+ + +++A+ D
Sbjct: 676 NLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYWQKDYQEALNDT 735
Query: 609 SSGSRTMMPHLI 620
+ R + P+ +
Sbjct: 736 KTAIR-LQPNFV 746
>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 119/228 (52%), Gaps = 14/228 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI + GK+ +AI+ FDQ+++ +P +PEA RGT+ + A++ F +AI
Sbjct: 79 LNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIAC 138
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +AW RG LG A++ KAL PN +I + +G + + + + A+
Sbjct: 139 NPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIA 198
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
+ ++L ++ ++ G+ +S +G K+A + KA++ D N W + L
Sbjct: 199 SFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRL 258
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +A+ ++ALEC+ + +A+ RG L +G++++A+
Sbjct: 259 GRLQDAVASYDRALECMPENY-------EAWDNRGYALVKMGRYREAM 299
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N G++ +A+ FD+ L P +PE +G ++ + AI+ F +A++
Sbjct: 148 NRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIASFNKALELK 207
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +W +G + +G EA+ KALEF+PN + RG+ + AV
Sbjct: 208 PDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGRLQDAVAS 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ EN A+ G AL +G Y++A + KA++++ + + A
Sbjct: 268 YDRALECMPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNA 315
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V F + +G+ + G + +A+++F +K P EA G G A + E AI+ F
Sbjct: 6 AVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFD 65
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A NP W RG + G+ AI + +E EP + + RG
Sbjct: 66 QAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRN 125
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + + A++ G L+++G +K A ++ KA+ + N E W +
Sbjct: 126 KEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGC 185
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + A+ + L + ++ +G+++ +G+ K+A+
Sbjct: 186 LLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEAL 231
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP + +I +G + +AA++ F +A++ P GEAW G A L EAI
Sbjct: 3 DPKAVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIA 62
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+A P A I RGIV + AA+ ++ + + A+ G +L +
Sbjct: 63 SFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMIL 122
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G K+A + +AI + N+ +AW + +L + AL+ + L+I + ++
Sbjct: 123 GRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYN 182
Query: 591 RGLLLHGLGQHKKAI 605
+G LL L + AI
Sbjct: 183 QGCLLMQLQKRDDAI 197
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 34/164 (20%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P + + ++G+ + DF+AAV VKL EN A+T LGLAL + Y++A
Sbjct: 3 DPKAVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIA 62
Query: 539 AHLKA---------IQLDRNFL-------------------------EAWGHLTQFYQDL 564
+ +A I L+R + EAW L
Sbjct: 63 SFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMIL 122
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++AL Q + + + KA+ RG +L LG+HK A+K
Sbjct: 123 GRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSF 166
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
+++GI G+ A+ +++ L+ DP RG T R R L+ A++ + A++
Sbjct: 215 INKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGR-LQDAVASYDRALE 273
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW RG A +G EA+ KALE P+ + ++ +G AV
Sbjct: 274 CMPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAV 333
Query: 504 EDLSACVKLDKE 515
+ +K++ +
Sbjct: 334 NYIEQAIKVNPQ 345
>gi|434405402|ref|YP_007148287.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428259657|gb|AFZ25607.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 662
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ FD+ L+ P + EA RG E AI+ + +AI+
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAITSYDKAIEIK 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW G A LG+ +AI KALE +P+ + RG+ K + A+
Sbjct: 329 PDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIAS 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ GLAL +G Y+ A + + I++ ++ EAW +L
Sbjct: 389 YDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLE 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+E A+ +V+ I + +A++ RGL L LG ++ AI
Sbjct: 449 RNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAI 488
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF + RG+ G+Y AI+ +D+ L+ P Y EA RG A
Sbjct: 351 AIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLAL 410
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+ F E I+ P EAW +RG L + AI + ++ +P+ +
Sbjct: 411 GELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEA 470
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + A+ +K+ ++ A+ GLAL +IG Y+ ++ + ++
Sbjct: 471 WYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNRGLALGNIGRYEDEIASYHELLK 530
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N EAW + +L +E+A+ +V+ + + ++ RGL L LG+++ AI
Sbjct: 531 IKPNDYEAWYNWGIALVNLGKNEEAIAYFDKVVNLKPDDYQTWYNRGLALGKLGRYENAI 590
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E +Y AI+ D+ ++ P +A RG A E AI+ F +A++ P EAW
Sbjct: 243 EERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWN 302
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG + EAI KA+E +P+ + + G + A+ +++
Sbjct: 303 NRGAVLGNLGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIK 362
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ G+ L +G+Y++A ++ KA+++ ++ EAW + +L + A+
Sbjct: 363 PDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIAS 422
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++V+ I + +A+ RG++L L +++ AI
Sbjct: 423 FKEVIRIKPDYCEAWFKRGVMLGNLERNENAI 454
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ + A F+ E AI+ +AI+ P +AW RG A LG EAI KALE
Sbjct: 234 VKQADALFFEERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEI 293
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P+ + + RG V A+ +++ + A+ LG AL +G+ +KA
Sbjct: 294 KPDFHEAWNNRGAVLGNLGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIA 353
Query: 539 AHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ KA+++ +F +AW G L Q+ + +A+ +KALE I + +A++ R
Sbjct: 354 SYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIASYDKALE-------IKPDYYEAWYNR 406
Query: 592 GLLLHGLGQHKKAI 605
GL L LG+++ AI
Sbjct: 407 GLALGELGRYQDAI 420
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 39/256 (15%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ +RG+A G+Y AI+ F ++++ P Y EA RG
Sbjct: 385 AIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKPDYCEAWFKRGVML 444
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ F E I+ P EAW RG A LG +AI + L+ +P+ +
Sbjct: 445 GNLERNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEA 504
Query: 486 LHERG------------------IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---- 523
+ RG ++ K D+ A A V L K N+ A Y
Sbjct: 505 WYNRGLALGNIGRYEDEIASYHELLKIKPNDYEAWYNWGIALVNLGK-NEEAIAYFDKVV 563
Query: 524 -------------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
GLAL +G Y+ A ++ KA+++ +AW + + + N E A
Sbjct: 564 NLKPDDYQTWYNRGLALGKLGRYENAIASYDKAVEIKPELQQAWYNKACYCALVQNLEPA 623
Query: 571 LECLQQVLYIDKRFSK 586
LE LQQ + ++ ++ K
Sbjct: 624 LENLQQAIKLNPQYKK 639
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 83 ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQS--- 137
E ++ I CDKA++L P + +A+ +G A LGR EEA++ ++K E H++
Sbjct: 244 ERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNN 303
Query: 138 --ADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSLTVSESGLNANDKMSET 188
A L EE +T+ D+++ + Y++ N++ L E + + DK E
Sbjct: 304 RGAVLGNLGRNEEAITS--YDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEI 361
Query: 189 SENHNKS 195
+ +++
Sbjct: 362 KPDFHQA 368
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR L H+ I DKAL++ P +A+ +G LGR EEA++ Y+ A
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAIT----SYDKA 324
Query: 134 LHQSADLKQ-FLELEELLTAAKQDRSVTCEYD 164
+ D + + L L QD YD
Sbjct: 325 IEIKPDFHEAWYNLGNALVQLGQDEKAIASYD 356
>gi|359461395|ref|ZP_09249958.1| pentapeptide repeat-containing serine/threonine kinase
[Acaryochloris sp. CCMEE 5410]
Length = 699
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V L +G + +G Y A+ + +++DP EA G + +L+ +I+ +T
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGSIAHYTT 470
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ P++ +A+ RG R+ LG+ + AI D ++A+ P + RG + +
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D S +++D + AY G+ S +G K A + + I+L+ N+ +A+ +
Sbjct: 531 AAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQAYNNRGIA 590
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y +L N + A+ Q + +D ++++AY RG LG + AI D +
Sbjct: 591 YVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYT 639
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+I+ + ++ P +A RG R+ + AAI+DFTEAI+ NP +A+ RG
Sbjct: 463 GSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTI 522
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ +G+ AI D S+A++ + + RGIV + AA+ D S ++L+
Sbjct: 523 YSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQ 582
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A ++G K A + +AI++D + A+ + L N + A+ Q +
Sbjct: 583 AYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAI 642
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID ++KAY RG + LG+ ++AI+DL
Sbjct: 643 DIDSTYAKAYENRGTVKGQLGKKQEAIQDL 672
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 4/287 (1%)
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--R 387
++S+ K +S+ R F + + +++ + +K R+S+ S F L+
Sbjct: 326 EASLPPTKVVESSVDRRSKPFIFYLAPQSNTTSL--QKDSSPRMSRKVVGSALFTLTLLG 383
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI V SA+S + E + + +G + Q + + A+ ++ AIQ +P
Sbjct: 384 GIGYVVAQGLQSAVSPKAITVAEVNRQVQGHLQQGDQKFAQGDYQRALREYAAAIQKDPE 443
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G + L + +I + A+ +P S D + RG+V + D AA+ D +
Sbjct: 444 NAEAHFNSGITKRRLNDLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFT 503
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ ++ AY G S +G+ + A + +AIQ+D + EA+ + DL N+
Sbjct: 504 EAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNT 563
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ A+ QV+ ++ +++AY+ RG+ LG K AI D + R
Sbjct: 564 KAAIADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRV 610
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
F + K N+ K + T I + K SVD +RG+ + G +AI+ F + ++
Sbjct: 449 FNSGITKRRLNDLKGSIAHYTTAI-RLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR 507
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P + +A RGT + + +AAI+D+++AIQ + EA+ RG ++ LG + AI
Sbjct: 508 LNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D S+ + N A + RGI + A+ D + +++D + AYT G A +
Sbjct: 568 ADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLT 627
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+G + A + +AI +D + +A+ + L ++A++ LQ+
Sbjct: 628 LGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQK 674
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA VN G +AI+ + Q ++ DP Y A RGTA+ +AAI+D+T+AI +
Sbjct: 586 NRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAIDID 645
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A++ RG + LG+ EAIQDL KA ADI +G K KD+ +E
Sbjct: 646 STYAKAYENRGTVKGQLGKKQEAIQDLQKA-------ADIYQVQG----KTKDYQKMIEA 694
Query: 506 L 506
+
Sbjct: 695 I 695
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 14/254 (5%)
Query: 296 RHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDML 355
+ G Q D L +A++ N+E++ S I+ + +D S + + L
Sbjct: 416 QQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGSIAHYTTAI-RL 474
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGKYASAIS 402
K TS +A N+ + + + DF RL+ RG GK +AI+
Sbjct: 475 KPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIA 534
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ Q ++ D Y EA RG ++ +AAI+D+++ I+ N + +A+ RG A L
Sbjct: 535 DYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQAYNNRGIAYVNL 594
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G AI D ++A+ +P A RG + AA+ D + + +D AY
Sbjct: 595 GNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYEN 654
Query: 523 LGLALSSIGEYKKA 536
G +G+ ++A
Sbjct: 655 RGTVKGQLGKKQEA 668
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSY 67
L T I + +++R++S A A R I L +L+N +++AIR+ D A++Y
Sbjct: 560 LGNTKAAIADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRV-DPKYARAY 618
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L + I D +A+ +D T +AY +G LG+K+EA+ +
Sbjct: 619 -----TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673
Query: 128 K 128
K
Sbjct: 674 K 674
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++S+ IR L+S AQ+Y NR Y L K+ I D +A+++DP +AY
Sbjct: 565 AAIADYSQVIR-LNSNYAQAYN-----NRGIAYVNLGNLKNAIADYTQAIRVDPKYARAY 618
Query: 107 ILKGCAFSALGRKEEAL----------SVWEKGYEH 132
+G A LG K+ A+ S + K YE+
Sbjct: 619 TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYEN 654
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
++ RLN +I +R+ A R EL KL ++ ++++AIR L+
Sbjct: 454 TKRRLNDLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR-LNPQH 512
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+Y NR YS++ + I D +A+Q+D +AY +G S LG + A+
Sbjct: 513 VQAYN-----NRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 124 SVWEK 128
+ + +
Sbjct: 568 ADYSQ 572
>gi|427730483|ref|YP_007076720.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427366402|gb|AFY49123.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 604
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI G Y AI+ F Q L+ P A RG E + AI+D AIQ +P
Sbjct: 153 RGIVHNGCGDYPEAIADFQQALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG LG+ AI+D + A+E PN A + RG + + K+++ A+ED
Sbjct: 213 NLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ E+ AY GL G+Y+ A + +A+Q++ + +G + L +
Sbjct: 273 NQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
AL Q+L + + + Y R LG ++ AI D + + + P+L+
Sbjct: 333 YPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQ-ALQINPNLV 385
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 8/221 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ F+ ++ +P + EA RG AR + AI+D+ +A+ NP+ E++ RG
Sbjct: 53 YLGAIAFFNLSVEINPHFAEAYYHRGNARYCLADYSRAIADYHQALDINPTFAESYYCRG 112
Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
+A A+G+ +AI D +E P + A+ + RGIV+ D+ A+ D
Sbjct: 113 RAYFAVGDYDQAIADYINTIEVNPQLASHINLDIANAYYHRGIVHNGCGDYPEAIADFQQ 172
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ +AY+ G+ ++GEY++A H +AIQLD N EA+ + Y L +
Sbjct: 173 ALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDPNLAEAYHNRGNVYYVLGDYP 232
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + I+ + AY+ RG + ++ A++D +
Sbjct: 233 AAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDFN 273
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G Y AIS ++Q L+ +P EA GR ++ AI+D T+AI+ P
Sbjct: 357 RATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAP 416
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG R LG+ A+ D ++AL PN + RG +++ +++ A+ D
Sbjct: 417 DFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADY 476
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ ++ Y++ + ++ +Y +A + +AI +D + +E W + + + L N
Sbjct: 477 TQALEINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGN 536
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AL L L ++ AY LR + LG + AI D
Sbjct: 537 FPEALADLNTALQRQPYWASAYLLRAEIRRNLGDKEGAISDF 578
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I +D L+ RG G Y +AI ++ ++ +P A RG R+ Q+E
Sbjct: 206 RAIQLDPNLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEY 265
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ DF +A++ NP +A+ RG R G+ AI D ++AL+ P + R
Sbjct: 266 HLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRAN 325
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + D+ A+ D + + L + + Y A +G+Y+ A + +A+Q++ N +
Sbjct: 326 VRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLV 385
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ ++ L + A+ Q + F+ AY RG + LG H+ A+ D +
Sbjct: 386 EAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQ- 444
Query: 612 SRTMMPHLI 620
+ + P+L+
Sbjct: 445 ALAINPNLV 453
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI+ ++Q L+ +P R R + A++D + + +P
Sbjct: 289 RGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGDYPGALADSNQLLTLHP 348
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ R AR LG+ AI D ++AL+ PN + + R I + +DF A+ D
Sbjct: 349 QLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADN 408
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + AY G +G+++ A + +A+ ++ N +E++ + + N
Sbjct: 409 TQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQN 468
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ Q L I+ + + Y R + L Q+ +AI D +
Sbjct: 469 YQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADYT 511
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + A++ ++Q L +P E+ RG Q+ + AI+D+T+A++ N
Sbjct: 424 NRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEIN 483
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + R + AL + +AI D ++A+ + + + + RG + + +F A+ D
Sbjct: 484 PQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGNFPEALAD 543
Query: 506 LSACVKLDKENKSAY 520
L+ ++ SAY
Sbjct: 544 LNTALQRQPYWASAY 558
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +RG + Y AI+ + Q L+ +P R + + AI+D+T+
Sbjct: 453 VESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADYTQ 512
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI + S E W RG++ A LG EA+ DL+ AL+ +P A R + D
Sbjct: 513 AILIDSSDVEDWYNRGRSHAQLGNFPEALADLNTALQRQPYWASAYLLRAEIRRNLGDKE 572
Query: 501 AAVEDLSACVKLDKEN 516
A+ D ++ +++
Sbjct: 573 GAISDFQQSAEIYQQD 588
>gi|392411460|ref|YP_006448067.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390624596|gb|AFM25803.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 407
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G A++ + LK A RG + + ++AI D +A++ +P+
Sbjct: 36 GLDAEDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVKLDPA 95
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ R G A AL + AI+ L++A++ +P S++ L+ RG D+++AV D
Sbjct: 96 YAAAYTRLGFAYNALNDYEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFD 155
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
A ++L+ + Y G AL+ EY +A E +AI LD + + Y +
Sbjct: 156 AAIRLNSNDARYYNNRGFALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDF 215
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ALE ++ L +D +FS AYH RG+ L G G+H KA++++S
Sbjct: 216 DRALEDFERTLKLDSKFSSAYHNRGMALSGKGRHDKAVEEIS 257
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI +Q ++ DP EAL RG A + + ++A+ DF AI+ N + + RG
Sbjct: 113 YEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRG 172
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A E A++D +A+ + A + RG+ + KDF+ A+ED +KLD +
Sbjct: 173 FALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKF 232
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SAY G+ALS G + KA E K I+++ + + Y+ + E A++ L++
Sbjct: 233 SSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEK 292
Query: 577 VLYIDKRFSKAY 588
+ +DK+F+ Y
Sbjct: 293 AIDLDKKFAPGY 304
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 153/358 (42%), Gaps = 44/358 (12%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS 349
+ VN R G + D+ + D A + +Y++ + N +D + L+
Sbjct: 69 RGEVNLRKGDPQSAIKDLLQAVKLDPAY-------AAAYTRLGFAYNALNDYEHAIEALN 121
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGK 396
+ L TS+EA + F S DF RL+ RG A + +
Sbjct: 122 -QAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRGFALNGKHE 180
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
YA A+ FD+ + D RG A Q++ + A+ DF ++ + A+ RG
Sbjct: 181 YARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKFSSAYHNRG 240
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A + G +A++++SK +E P+S + +RG K +F AV+DL + LDK+
Sbjct: 241 MALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEKAIDLDKKF 300
Query: 517 KSAYTYLG--LALSSIGEYKKAEEA---HLKAIQLDR----NFLEAWGHLTQFYQDLANS 567
Y L A S+ +YK + A KA+ L + + LE + QF AN+
Sbjct: 301 APGYAALAQVYAFSTDPKYKNSTMALKLAEKALALGKGDSPDILENLAEI-QF----ANN 355
Query: 568 EKAL--ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+KAL LQ+ L +D +K Y L L + + A D ++G+ P NL
Sbjct: 356 QKALAVRTLQKALTMDPT-NKEY------LELLAKWQGAPSDTATGTPVSGPSPFSNL 406
>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 349
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ S++ D L+RGI + +Y AI ++Q ++ +P Y EA RG + E A+
Sbjct: 28 ADSLNYDEYLNRGIIFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAM 87
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D+TEAI+ + A+ RG +G+ A D + A+ +PN A RG ++ +
Sbjct: 88 ADYTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLR 147
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+++ A+ D + V+L A+ G A ++ GEY KA + +AI+++ N++EA
Sbjct: 148 KGEYDQAILDFNQAVRLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALI 207
Query: 556 HLTQFYQDLANSEKALECLQQVLYID----KRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ Y D+ ++A +V+ I+ +AY RG+ + G + KAI D +
Sbjct: 208 NRGNIYYDVGYPDRAKVDYDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEA 267
Query: 612 SRTMMPHL 619
+ + P+L
Sbjct: 268 IK-LNPNL 274
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y A + F + DP Y +A RG + E + AI DF +A++ +
Sbjct: 106 NRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLRKGEYDQAILDFNQAVRLS 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A A GE +A+ D ++A+ PN + L RG + + + A D
Sbjct: 166 PGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVD 225
Query: 506 LSACVKLD----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ ++ + AY+ G+A ++ G+Y KA + +AI+L+ N A+ H Y
Sbjct: 226 YDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVY 285
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ A++ + + I+ ++ AY RG L LG++ +A D R
Sbjct: 286 ANIGEYRLAIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVR 337
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A N+G+Y A++ ++Q ++ +P Y EALI RG + A D+ I N
Sbjct: 174 SRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYDRVISIN 233
Query: 446 PSAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+AG A+ RG A G+ +AI D ++A++ PN A RG V ++
Sbjct: 234 LNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRL 293
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A++D + ++++ +AY G ALS +GEY +A+ + +A++++ + E +
Sbjct: 294 AIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIY 346
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G Y AI+ +++ +K +P A RG A E AI DF AI+ N
Sbjct: 246 NRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAIEIN 305
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
P+ A+ RG+A + LGE +A D +A+ +I +R
Sbjct: 306 PNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIYDKR 349
>gi|430743555|ref|YP_007202684.1| hypothetical protein Sinac_2691 [Singulisphaera acidiphila DSM
18658]
gi|430015275|gb|AGA26989.1| TPR repeat-containing protein [Singulisphaera acidiphila DSM 18658]
Length = 654
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
G+ QV G+ AI + + ++ +P P +GR A +++ E A+ DF EAI+ N
Sbjct: 144 GLGQVAHRLGQDDVAIEQYGEAIRANPSDPSGFLGRAEALVSKKDFEQALPDFGEAIRLN 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A LG EA+ D A+E + ++A+ RG + + + A+ D
Sbjct: 204 PRQSRAYGFRGDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGENERALPD 263
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L A ++L+ +AY G L +G Y +A E K+I +D ++ + Y LA
Sbjct: 264 LDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLA 323
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
EKA+ L + +++D A GL L LGQ+++A+ +++ +R
Sbjct: 324 QYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATR 371
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ K K ++ R RG+A + + A A++ FD +++ P + I RG AR E E
Sbjct: 55 VLKRKPRDLEARTKRGVAYLRLNQPAQAMADFDAVIRITPWSYSSHIDRGIARVMLGEYE 114
Query: 433 AAISDFTEAI-------QSNPSA-GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A DF +++ + +P++ A GQ LG+ AI+ +A+ P+
Sbjct: 115 DARKDFDQSLGLLALSFKRDPTSLANAHCGLGQVAHRLGQDDVAIEQYGEAIRANPSDPS 174
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
R KDF A+ D ++L+ AY + G AL +G K+A AI
Sbjct: 175 GFLGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAI 234
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+LD + EA L +E+AL L V+ ++ R + AY RG +L LG++ +A
Sbjct: 235 ELDADNAEAHSRRGSLLAQLGENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQA 294
Query: 605 IKDLS 609
I+DL+
Sbjct: 295 IEDLN 299
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ +S + FR G A G+ A++ FD ++ D EA RG+ A E
Sbjct: 201 RLNPRQSRAYGFR---GDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGEN 257
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ D I+ NP A+K RG LG +AI+DL+K++ +P A RG
Sbjct: 258 ERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGA 317
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ AV DL+ + LD N A T LGLAL ++G+Y++A +A +L N
Sbjct: 318 AYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNNS 377
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + Y L ++A+E + L +D + A+ G LG+ +AI
Sbjct: 378 LVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAI 431
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L R A V++ + A+ F + ++ +P A RG A L+ A++DF AI+
Sbjct: 177 LGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAIEL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EA RRG A LGE+ A+ DL + P A +RG V + ++ A+E
Sbjct: 237 DADNAEAHSRRGSLLAQLGENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIE 296
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL+ + +D S+Y G A S + +Y+KA +AI LD A +L L
Sbjct: 297 DLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFAL 356
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+AL + + + S + R LG +A++D + R
Sbjct: 357 GQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALR 405
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG V G+Y AI ++ + DP + RG A + + E A+ D EAI +P
Sbjct: 281 RGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDP 340
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A G A ALG+ A+ ++++A PN++ + R + + AVED
Sbjct: 341 TNPGARTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDY 400
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + A+ LG A S+G +A ++ A+QL+ + + +
Sbjct: 401 NEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGD 460
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRG 592
+ ALE + + ++ ++++AY LRG
Sbjct: 461 WKGALEDFSKAIELNPKYAEAYVLRG 486
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 2/221 (0%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+AQ+ E + A+ D +++ +P A RG + AI D ++I +P
Sbjct: 251 LAQLGENE--RALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGR 308
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+++ RG A + L + +A+ DL++A+ +P + G+ F + A+ +++
Sbjct: 309 ASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNE 368
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+L N + + +G +A E + +A++LD + A L + L
Sbjct: 369 ATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRV 428
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ L ++ ++ Y RG G K A++D S
Sbjct: 429 QAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGALEDFS 469
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R + G+A G+Y A++ ++ + P + R A L+ A+ D+ EA++
Sbjct: 346 RTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALR 405
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P A A G+A+ +LG V+AI AL+ P +A + RG D+ A+
Sbjct: 406 LDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGAL 465
Query: 504 EDLSACVKLDKENKSAYTYLGLAL 527
ED S ++L+ + AY G +L
Sbjct: 466 EDFSKAIELNPKYAEAYVLRGWSL 489
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 376 SKSISVD-FRLS----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI++D R S RG A +Y A+ ++ + DP P A G A +
Sbjct: 299 NKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQ 358
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+++ EA + P+ + R A LG A++D ++AL +P + IL G
Sbjct: 359 YERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALRLDPKA--ILAHVG 416
Query: 491 IVNFK--FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + A+ ++L+ N YT G A + G++K A E KAI+L+
Sbjct: 417 LGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGALEDFSKAIELNP 476
Query: 549 NFLEAW 554
+ EA+
Sbjct: 477 KYAEAY 482
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIR------ILDSLLAQ 65
+L + + + ++D ++R++ A+A R + L L + +AI +D A
Sbjct: 253 QLGENERALPDLDAVIRLNPRRAAAYKDRGGV--LVRLGRYDQAIEDLNKSITIDPGRAS 310
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
SY+ NR YS L ++ + D ++A+ LDPT A G A ALG+ E AL+
Sbjct: 311 SYQ-----NRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALA 364
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD--SLLAQSYEIQ 70
L + K + +++E + +D A T + LA L +L + +A+ ++ + LA + +
Sbjct: 322 LAQYEKAVGDLNEAIHLDPTNPGART-NLGLA-LFALGQYERALAEMNEATRLAPNNSLV 379
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NRA Y++L L + D ++AL+LDP + A++ G A +LGR+ +A+ ++
Sbjct: 380 -FLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYD 435
>gi|254425548|ref|ZP_05039265.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196187971|gb|EDX82936.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 274
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G A Q +LE AIS + AIQ++P EA++ RG A LG +AI D S AL+
Sbjct: 52 LVEQGRQEAEQGQLEEAISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQ 111
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+PN + L+ RG D NAA+ DLS ++L + Y + L+ G++ A
Sbjct: 112 FQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLAL 171
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
AI L + +A+ + + Y +L N+E AL + + ++A+ RGLL +
Sbjct: 172 SDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQ 231
Query: 598 LGQHKKAIKDL 608
LG AI+DL
Sbjct: 232 LGDSNAAIEDL 242
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 354 MLKETSNEAK--RNKKFCVTRISKSK----SISVDFRLSRGIAQVNEGKYASAISIFDQI 407
M+ N A+ +KK ++ +S S + + +G + +G+ AIS +++
Sbjct: 16 MMAAVGNRARATEHKKAVYAQLPQSSIHIAVTSTNSLVEQGRQEAEQGQLEEAISTYNRA 75
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ DP EA RG A AI DF+ A+Q P+ E RG+A + +
Sbjct: 76 IQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINA 135
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ DLS+A+E P+ +R I+ F A+ DL + + L +N AY G
Sbjct: 136 ALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVY 195
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ +G + A AI+L N EA+G+ + L +S A+E LQQ
Sbjct: 196 TELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQLGDSNAAIEDLQQA 245
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G Y+ AI F L+ P PE L RG A + ++ AA+SD ++AI+ P
Sbjct: 89 RGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAP 148
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R A G+ A+ DL A+ P++AD + RG V + + AA+ D
Sbjct: 149 DFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDF 208
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L A+ GL +G+ A ++ +Q N +A G D +
Sbjct: 209 GTAIELAPNLAEAFGNRGLLHYQLGD----SNAAIEDLQQAANLFQARG-------DQQS 257
Query: 567 SEKALECLQQV 577
++ + +QQV
Sbjct: 258 YQQTVYFIQQV 268
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + ++ D +N AY Y GLA +G Y +A + A+Q N E H + Y
Sbjct: 68 AISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAY 127
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ AL L Q + + F + Y R ++L GQ A+ DL S
Sbjct: 128 SHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDS 176
>gi|254414040|ref|ZP_05027808.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179176|gb|EDX74172.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 481
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK-LS 349
+ V +R GR G H D+ + D+ + + Y+ +S ++ K L+
Sbjct: 170 SPVFDREGRVI-GIHGQGDREAYDA-------IDHQGYTTGQVSVRTGFNAAIPIQKFLA 221
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
+ + + +N N + +S +++ RG++ + G++ +I+ FDQ ++
Sbjct: 222 MRSQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQ 281
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+ P Y EA RG AR Q +L +I+D+++AI+ N S +A+ R R+ G+ AI
Sbjct: 282 KQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAI 341
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D ++A+ + + A + RG+ +D A+ED S ++++ + Y GLA S
Sbjct: 342 ADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSR 401
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + ++A + +AI+L+ N+ +A+G+ + L A+ LQQ
Sbjct: 402 LRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADLQQ 448
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I+DF +AIQ P+ EA+ RG AR G+ +I D S+A+ + AD + R +V
Sbjct: 272 SIADFDQAIQKQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVR 331
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D A+ D + +++D +AY GLA S + + + A E +A++++
Sbjct: 332 SQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANT 391
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + Y L + +A+ + + ++ ++KAY RGL LG+ AI DL
Sbjct: 392 YYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADL 446
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +R + + G A AI+ + Q ++ D + A RG AR+ + + AI DF++A
Sbjct: 322 DAYYNRAVVRSQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQA 381
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP + RG A + L + AI D ++A+ N A RG+ + + ++
Sbjct: 382 LRINPGKANTYYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHS 441
Query: 502 AVEDLSACVKL 512
A+ DL +L
Sbjct: 442 AIADLQQAAQL 452
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 459 RAALGESVEAIQ------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R+ +G+SV I+ S N A + RG+ +F ++ ++ D ++
Sbjct: 223 RSQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQK 282
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
AY Y GLA G+ + + +AI+L+ ++ +A+ + + A+
Sbjct: 283 QPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAIA 342
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + ID F+ AY+ RGL L + AI+D S R
Sbjct: 343 DYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALR 383
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 20 ICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLLAQSYEIQDICN 74
I + + +R+DS A+A AR +L + ++ ++S+A+RI + A +Y N
Sbjct: 341 IADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRI-NPGKANTY-----YN 394
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
R YS+L + I D +A++L+ +AY +G AF+ LG A++
Sbjct: 395 RGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIA 444
>gi|145528297|ref|XP_001449948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417537|emb|CAK82551.1| unnamed protein product [Paramecium tetraurelia]
Length = 1001
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 6/240 (2%)
Query: 369 CV-TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
C+ + K+ SV + +G + +GK AI IFD+ ++ DP Y +G A
Sbjct: 313 CIDVALQKNPEYSVGY-FRKGYSLWQQGKNQDAIFIFDKAMQIDPSYASTYNYKGNALND 371
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ AI + +AIQ P+ A+ ++G A + L + EAI KA++ +PN A +
Sbjct: 372 LKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYN 431
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G K +N A+ ++LD ++ Y G AL+++ +Y +A + KAIQ +
Sbjct: 432 NKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFN 491
Query: 548 RNFLEAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+N+ + H ++ Y +L ++A+ C + ID ++ AY +G LH Q+K+AI
Sbjct: 492 KNY--SVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAI 549
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I +K+ SV S+G A N +Y AI ++ +K DP Y A +GT ++ +
Sbjct: 488 IQFNKNYSVA-HFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYK 546
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI ++ AI+ +PS + +G A + L + EAI KA++ +PN ++G
Sbjct: 547 EAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDEVAYFKKGNA 606
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K +N A+ ++LD ++ AY G AL+ + +YK+A + KAIQL+ N
Sbjct: 607 LSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQV 666
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
A+ + QDL +++ C + + ID ++ Y +G +LH L +K A++ G
Sbjct: 667 AYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDKGI 726
Query: 613 R 613
+
Sbjct: 727 K 727
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 34/255 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + +Y AI +D+ ++ DP A +G+A ++ + AI + +AIQ
Sbjct: 601 FKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQL 660
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ +G L + E+I KA+E +PN A+ ++G V K++ A+E
Sbjct: 661 NPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALE 720
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
+KLD Y Y G L ++ Y +A + AI+LDRN+ A+ + L
Sbjct: 721 CYDKGIKLDSSQTLIYNYKGRTLHNLKSYNEAIFYYNNAIKLDRNYAMAYNNKGRALHDL 780
Query: 558 TQFYQ---------------------------DLANSEKALECLQQVLYIDKRFSKAYHL 590
Q+ + DL +L+C + ID+ F+ AY+
Sbjct: 781 KQYNEAIISYDEAIKKDPSLAIAFNNKGRALHDLQKYNDSLQCYDTAIQIDQNFAIAYNN 840
Query: 591 RGLLLHGLGQHKKAI 605
+G L+ L Q+ AI
Sbjct: 841 KGRALYNLKQYTDAI 855
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 5/245 (2%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K++ + K+I +D F ++G A + +Y AI +D+ ++ DP
Sbjct: 407 KQYNEAIVCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFN 466
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A ++ AI + +AIQ N + A +G A L + EAI + A++ +P
Sbjct: 467 KGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKIDP 526
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N +G FK + A+ S ++LD + S YT+ G ALS + +Y +A +
Sbjct: 527 NYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCY 586
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQLD N A+ DL A+ + + +D AY+ +G L+ L Q
Sbjct: 587 DKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQ 646
Query: 601 HKKAI 605
+K+AI
Sbjct: 647 YKEAI 651
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A N +Y AI +D+ ++ + Y A +G A ++ + AI + AI+
Sbjct: 465 FNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKI 524
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ +G + EAI S A+E +P+ A + +G K +N A+
Sbjct: 525 DPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIV 584
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++LD ++ AY G ALS + +Y A + KAIQLD N A+ DL
Sbjct: 585 CYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDL 644
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ C + + ++ AY +G L L Q+ ++I
Sbjct: 645 KQYKEAIFCYDKAIQLNPNCQVAYFNKGNTLQDLQQYNESI 685
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI ++ +K D Y A +G A ++ AI + EAI+ +PS A+ +G
Sbjct: 749 YNEAIFYYNNAIKLDRNYAMAYNNKGRALHDLKQYNEAIISYDEAIKKDPSLAIAFNNKG 808
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+A L + +++Q A++ + N A + +G + K + A+ +++D
Sbjct: 809 RALHDLQKYNDSLQCYDTAIQIDQNFAIAYNNKGRALYNLKQYTDAIVCYDKAIQIDPNF 868
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--------QDLANSE 568
AY G AL ++ +YK A + KAIQ+D NF A+ + Q Y +L +
Sbjct: 869 TIAYNNKGKALHNLKQYKDAIACYDKAIQIDPNFTIAYNNKGQKYLIQLGNALSNLNQNN 928
Query: 569 KALECLQQVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWR 627
A++C + + I+ + Y +GL L GQ IK+ + I N ++
Sbjct: 929 DAIDCFNKAININPNDTTNYFQKGLKYLIVQGQFLTNIKNYTQAIEN-YEQAILNCKSYQ 987
Query: 628 N 628
N
Sbjct: 988 N 988
>gi|428212529|ref|YP_007085673.1| hypothetical protein Oscil6304_2088 [Oscillatoria acuminata PCC 6304]
gi|428000910|gb|AFY81753.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 1049
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + AI ++Q +K +P EA + RG ARA +L AISDFTE I+ N
Sbjct: 787 NRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKIN 846
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR G+ AI D ++A++ P A + RG D + A+ D
Sbjct: 847 PQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISD 906
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ +K++ + AY G+A S + + A +AI+++ + +A+ G ++ +
Sbjct: 907 FTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSE 966
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
D+ A+ + + I+ +++ AY+ RG+ + + I+D+ G + +
Sbjct: 967 DMPG---AISDFTEAIKINPQYADAYYNRGVARYLSEDKQGGIEDIQKGEQLL 1016
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G AI F+Q +K +P A RG AR + + I+D+T+AI N
Sbjct: 685 NRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLN 744
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR G+ AI D +KA+E P A + RG D + A++D
Sbjct: 745 PQYADAYNNRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDD 804
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ ++ AY G+A + G+ A + I+++ + A+ + +D
Sbjct: 805 YNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSG 864
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A++ Q + I+ + + AY+ RG G AI D +
Sbjct: 865 DLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFT 908
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G + AI+ + + ++ +P+Y A RG AR +L AI D+ +AI+ N
Sbjct: 753 NRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKIN 812
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RRG ARA G+ AI D ++ ++ P A + RG D A++D
Sbjct: 813 PQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDLAGAIDD 872
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ +K++ + AY G A + G+ A +AI+++ + +A+ G + +
Sbjct: 873 YNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVASSILE 932
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
D+ A+ + + I+ +++ AY RG++
Sbjct: 933 DMPG---AISDFTEAIKINPQYADAYLNRGIV 961
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + I+ + + + +P Y +A RG AR +L AI+D+T+AI+ N
Sbjct: 719 NRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSGDLSGAIADYTKAIELN 778
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR G+ AI D ++A++ P A+ RGI D A+ D
Sbjct: 779 PLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISD 838
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G A G+ A + + +AI+++ A+ + ++
Sbjct: 839 FTETIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSG 898
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + + I+ +++ AY+ RG+ L AI D +
Sbjct: 899 DLSGAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFT 942
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGR-GTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y A++ DQ ++ + R G A R EA ++ +T AI P + A+
Sbjct: 628 QYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEA-VAAYTIAIDITPHS-WAYNN 685
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG R LG+ AI D ++A++ P + + + RG + D+ + D + + L+
Sbjct: 686 RGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNP 745
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G+A G+ A + KAI+L+ + A+ + +D + A++
Sbjct: 746 QYADAYNNRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDY 805
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + I+ + ++AY RG+ G AI D +
Sbjct: 806 NQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFT 840
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A AIS F + +K +P Y +A + RG + ++ AISDFTEA
Sbjct: 919 DAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEA 978
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
I+ NP +A+ RG AR + I+D+ K
Sbjct: 979 IKINPQYADAYYNRGVARYLSEDKQGGIEDIQKG 1012
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + A+ F+Q + D EA +G + F ++ A++ +AIQ
Sbjct: 584 ARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASIDQAIQRQ 643
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R +AL EA+ + A++ P+S + RG + D A++D
Sbjct: 644 NQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW-AYNNRGAIRKDLGDVQGAIDD 702
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ +N +AY G A G+++ + KAI L+ + +A+ + +D
Sbjct: 703 FNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSG 762
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + + ++ ++ AY+ RG G AI D +
Sbjct: 763 DLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYN 806
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI F +AI N ++ AW RG A +A EA+ +A+ + + E+G
Sbjct: 562 EQAIEAFNQAIHLNRNSYAAWYARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGK 621
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + A+ + ++ ++ Y + LS++ Y++A A+ AI + +
Sbjct: 622 SLLFLKQYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW 681
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ + +DL + + A++ Q + I+ + + AY+ RG
Sbjct: 682 -AYNNRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRG 721
>gi|390334343|ref|XP_787775.3| PREDICTED: tetratricopeptide repeat protein 13-like
[Strongylocentrotus purpuratus]
Length = 926
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQRELEAA--IS 436
D++L I +N G+ A+ + ++K+DP + A R A R Q L AA I
Sbjct: 207 DYKLGFSIVLLNTGREEMALDMISALIKQDPKFIGAYHARAVAYSRRGMQHPLNAALAIQ 266
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DFT AI+ +P W++R + + G + EA D+SKA++ P +A + RG + FK
Sbjct: 267 DFTRAIELDPRNPIGWEKRAEVFSTQGRNREAYGDISKAIDLRP-TAKLYKYRGYMMFKE 325
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + AA +DL VK DK L ++L G+ ++ KA+++ ++++
Sbjct: 326 EKYVAATKDLMESVKEDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVLRS 385
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L + Y++L + E +L+ + L+ ++ LRG L + G+ ++A+ D
Sbjct: 386 LARAYRELGDYENSLDSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDF 437
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 3/187 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--RGIAQVNEGKYASAISIFDQILK 409
W+ E + RN++ ISK+ + +L RG E KY +A + +K
Sbjct: 282 WEKRAEVFSTQGRNRE-AYGDISKAIDLRPTAKLYKYRGYMMFKEEKYVAATKDLMESVK 340
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
ED + + + Q +L +I F +A++ P + + +A LG+ ++
Sbjct: 341 EDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVLRSLARAYRELGDYENSL 400
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+KAL + P+ + RG +++ A+ D C+ LD N+ G L S
Sbjct: 401 DSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDFQFCLGLDPTNEVCRYMKGACLVS 460
Query: 530 IGEYKKA 536
+G+Y A
Sbjct: 461 MGQYYDA 467
>gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102]
gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 630
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 43/268 (16%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
L++G+ +G Y A + + Q +K +P + EA RG Q ++ AI+DF AI+
Sbjct: 31 LNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIE 90
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ A+ RG A LG+ AI D ++ALE +PN A H RG F + ++ A+
Sbjct: 91 INPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALEKYDKAI 150
Query: 504 ED----------LSACVKLDKENK--------------------------------SAYT 521
D L+ + +D N +AY+
Sbjct: 151 ADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYS 210
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G +G +K+A H +A+QLD EA+ + + L N + A+ + L I+
Sbjct: 211 NRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEIN 270
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
RF+ AY+ RGL+L L ++ +AI+D +
Sbjct: 271 PRFAGAYYNRGLVLAHLKEYHRAIEDFN 298
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 116/222 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G + AI +D+ L+ + A GRG AR ++L+ AI D T+AI+ P
Sbjct: 382 RAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG R LG+ AI D ++AL+ P+ + + RG ++ + + +A+ D
Sbjct: 442 EFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADY 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ ++ + Y+ A ++ +Y+ A E + +AI +D +F E W + + L +
Sbjct: 502 TQALQINPQSAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGD 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ AL L Q L + ++ AY LR + LG + AI D
Sbjct: 562 LQGALTDLNQALQLQPHWASAYILRADVYQNLGDSQGAIADF 603
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G AI+ F Q L+ P + A RG + AI+D A+Q +
Sbjct: 177 NRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYSNRGNIHHILGNFKEAIADHDRALQLD 236
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A +L AI D ++ALE P A + RG+V K+++ A+ED
Sbjct: 237 PKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIED 296
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + ++ AY GL S++ +Y+ A + +A+Q + +G + L
Sbjct: 297 FNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLG 356
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + A+E ++L ++ ++ Y R LG HK AIKD
Sbjct: 357 DYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKD 398
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ D+ L+ DP EA RG A ++AI+D+ A++ NP A+
Sbjct: 220 GNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYN 279
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A L E AI+D ++AL+F P+ ERG+V +D+ A+ D ++ +
Sbjct: 280 RGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENP 339
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y + AL +G+Y+ A E + +QL+ + E + + L + + A++
Sbjct: 340 TLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDY 399
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L I+ + + AY+ RG+ L + AI D
Sbjct: 400 DRALQINDQLAAAYYGRGIAREALKDLQGAIDD 432
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y AI F+Q LK +P +A RG R+ + E AI+D+ A+Q N
Sbjct: 279 NRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQEN 338
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R A LG+ AI+D ++ L+ P+ A+ +R D A++D
Sbjct: 339 PTLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKD 398
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + +AY G+A ++ + + A + + +AI+L F +A+ + + L
Sbjct: 399 YDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLG 458
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ Q L I+ +AY+ RG + L ++ AI D +
Sbjct: 459 DEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYT 502
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y SAI+ +++ L+ +P + A RG A +E AI DF +A++ N
Sbjct: 245 NRGNAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIEDFNQALKFN 304
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG R+ L + AI D +AL+ P A + R + D+ A+ED
Sbjct: 305 PDDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLGDYQGAIED 364
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ Y A S+G++K A + + +A+Q++ A+ + L
Sbjct: 365 SNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALK 424
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ + A++ Q + + FS+AY RG LG + AI D + + + P LI
Sbjct: 425 DLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLGDEQGAIADYNQALK-INPDLI 478
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQS 444
RG+ + Y AI+ +D+ L+E+P AL+ A A +R + + AI D +Q
Sbjct: 314 RGLVRSTLEDYEGAIADYDRALQENPTL--ALVYGFRANALRRLGDYQGAIEDSNRLLQL 371
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NPS E + R AR +LG+ AI+D +AL+ A + RGI KD A++
Sbjct: 372 NPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAID 431
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L E AY G +G+ + A + +A++++ + +EA+ + + L
Sbjct: 432 DNTQAIELVPEFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYAL 491
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E A+ Q L I+ + + Y R + L ++ AI+D S
Sbjct: 492 EAYESAIADYTQALQINPQSAAFYSDRANARYALEDYQGAIEDYS 536
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 11/255 (4%)
Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
++ + + +++ I+ +F + RG A G Y AI+ ++Q L+ DP +
Sbjct: 76 KDYRGAIADFNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHS 135
Query: 421 RGTARAFQRELEAAISDFTEAIQS--------NPSAGEAWKRRGQARAALGESVEAIQDL 472
RG A + + AI+D+ + I++ N A+ RG G+ AI D
Sbjct: 136 RGNAYFALEKYDKAIADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADF 195
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL++ PN A RG ++ +F A+ D ++LD + AY G A S+
Sbjct: 196 QQALQWYPNFAAAYSNRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLEN 255
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A + +A++++ F A+ + L +A+E Q L + +AY RG
Sbjct: 256 YQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERG 315
Query: 593 LLLHGLGQHKKAIKD 607
L+ L ++ AI D
Sbjct: 316 LVRSTLEDYEGAIAD 330
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA-ALGESVEAIQD 471
M E + +G + Q + + A + +T+AI+ NP+ EA+ RG L + AI D
Sbjct: 25 MNAEEFLNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIAD 84
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A+E PN A + RG ++ D+ A+ D + +++D Y G A ++
Sbjct: 85 FNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALE 144
Query: 532 EYKKAEEAHLKAIQ--------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+Y KA +++ I+ ++ + A+ + + + + A+ QQ L
Sbjct: 145 KYDKAIADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPN 204
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKD 607
F+ AY RG + H LG K+AI D
Sbjct: 205 FAAAYSNRGNIHHILGNFKEAIAD 228
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AI+ ++Q LK +P EA RG+ E+AI+D+T+A+Q NP + +
Sbjct: 458 GDEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAFYSD 517
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R AR AL + AI+D S+A+ + + A+ + RG D A+ DL+ ++L
Sbjct: 518 RANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLNQALQLQP 577
Query: 515 ENKSAYTY-------LGLALSSIGEYKKAEEAHLK 542
SAY LG + +I +++K+ + + +
Sbjct: 578 HWASAYILRADVYQNLGDSQGAIADFQKSADLYYQ 612
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
++ Y L I + + + ++ A A R + L L+ + +AI + L
Sbjct: 248 NAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLV--LAHLKEYHRAIEDFNQALKFNP 305
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
++Q C R S LE ++ I D D+ALQ +PTL Y + A LG + A+
Sbjct: 306 DDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLGDYQGAI 362
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S F R A+ Y AI + + + D + E RG +R+ +L+ A++D
Sbjct: 511 SAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLN 570
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+A+Q P A+ R LG+S AI D K SAD+ ++ G V +
Sbjct: 571 QALQLQPHWASAYILRADVYQNLGDSQGAIADFQK-------SADLYYQEGNVQY 618
>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
NIES-843]
gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 594
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 23/283 (8%)
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGI 389
D+K +D TE ++F + E + N F S K++ + + +RGI
Sbjct: 137 DSKETDLTEVVQDVAFWF----EQGYQKLINGDFIGAIASYDKALEIKPDDHEAWYNRGI 192
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A N G++A AI+ +D+ L+ P +A RG A LE AI+ + +A++ P
Sbjct: 193 ALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQH 252
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAW RG A LG EAI KALE +P+ + + RGI F A+
Sbjct: 253 EAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRA 312
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQ 562
+++ + A+ G+AL ++G ++A ++ +A+++ + EAW G+L +F +
Sbjct: 313 LEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAE 372
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ +KALE I +A++ RG L LG+ +AI
Sbjct: 373 AIASYDKALE-------IKPDDHQAWYGRGFALDDLGRFAEAI 408
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P +A RG A LE AI+ + +A++
Sbjct: 291 NRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIK 350
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI KALE +P+ + RG F A+
Sbjct: 351 PDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIAS 410
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ +A++ + EAW + +L
Sbjct: 411 YDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLG 470
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL + L +A++ RG+ L L + ++A+
Sbjct: 471 RLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQAL 510
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L+ P EA RG A AI+ + +A++
Sbjct: 223 NRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + RGI A+
Sbjct: 283 PDDHEAWYNRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL ++G + +A ++ KA+++ + +AW DL
Sbjct: 343 YDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L I + +A++ RG L LG+ ++AI
Sbjct: 403 RFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAI 442
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P EA RG A AI+ + A++
Sbjct: 257 NRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +ALE +P+ + + RGI F A+
Sbjct: 317 PDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ ++ A+ G AL +G + +A ++ KA+++ ++ +AW G+L
Sbjct: 377 YDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLG 436
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F Q +A+ ++ALE +A+ RG+ L LG+ ++A+
Sbjct: 437 RFEQAIASYDRALE-------FKPDLHEAWVNRGVALGNLGRLEEAL 476
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P +A GRG A AI+ + +A++
Sbjct: 359 NRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIK 418
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI +ALEF+P+ + RG+ A+
Sbjct: 419 PDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALAS 478
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL ++ +++A ++ KA+++ + EAW + +L
Sbjct: 479 YDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNRGIALANLR 538
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL + L I F +A+ RG L LG+ +AI
Sbjct: 539 RFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAI 578
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L+ P EA RG A AI+ + +A++
Sbjct: 325 NRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIK 384
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI KALE +P+ + RG F A+
Sbjct: 385 PDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIAS 444
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL ++G ++A ++ KA++ + EAW + +L
Sbjct: 445 YDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLR 504
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM--MP--HLIW 621
E+AL + L I +A++ RG+ L L + ++A L+S R + P H W
Sbjct: 505 RFEQALASYDKALEIKPDLHEAWNNRGIALANLRRFEQA---LASYDRALEIKPDFHQAW 561
Query: 622 --------NLTRW 626
NL RW
Sbjct: 562 TNRGNALRNLGRW 574
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A + G++A AI+ +D+ L+ P Y +A RG A E AI+ + A++
Sbjct: 393 GRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFK 452
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EA+ KALEF+P+ + + RGI + F A+
Sbjct: 453 PDLHEAWVNRGVALGNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALAS 512
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL+++ +++A ++ +A+++ +F +AW + ++L
Sbjct: 513 YDKALEIKPDLHEAWNNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNALRNLG 572
Query: 566 NSEKALECLQQVLYI 580
+A+ Q + I
Sbjct: 573 RWAEAIASYYQAVAI 587
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ +RG A N G++ AI+ +D+ L+ P EA + RG A
Sbjct: 407 AIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVAL 466
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE A++ + +A++ P EAW RG A L +A+ KALE +P+ +
Sbjct: 467 GNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEA 526
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI + F A+ +++ + A+T G AL ++G + +A ++ +A+
Sbjct: 527 WNNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAIASYYQAVA 586
Query: 546 L 546
+
Sbjct: 587 I 587
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
Q NR F L + I D+AL+ P L +A++ +G A LGR EEAL+ ++K
Sbjct: 423 QAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKA 482
Query: 130 YE 131
E
Sbjct: 483 LE 484
>gi|359461182|ref|ZP_09249745.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 595
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 14/229 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A V+ G+Y A+ FD+ LK P YPE RG A + AIS F A+ N
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAIN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A RG A L + +AI +K +E +P+ + +G+ F + A+E
Sbjct: 363 SNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALES 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
++++ A+T+ G L +G Y++A ++ KA+++ + E W GHL
Sbjct: 423 WEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLD 482
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Q +++A+ + L I F +A++ RG L +G+HK+A+ +
Sbjct: 483 Q-------NKEAISSFDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSN 524
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E Y SAI +DQ L P Y +A RG A + A++ +A++ PS EAW
Sbjct: 243 EADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWN 302
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A LG EA++ KAL++ P+ ++ + RG+ + A+ + ++
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAIN 362
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ G+A + +++KA + K I++ + +AW + +L E+ALE
Sbjct: 363 SNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALES 422
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+Q + I+ F +A+ RG +L LG +++AI
Sbjct: 423 WEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAI 454
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
GT A + + ++AI + +A+ P+ +AW RG A L EA+ KALE +P+
Sbjct: 237 GTLFAAEADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQPS 296
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG+ + AVE +K + + G+A ++G+Y +A +
Sbjct: 297 KYEAWNNRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFD 356
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A+ ++ N ++A + + L EKA+ +V+ I KA++ +G+ L LG +
Sbjct: 357 RALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMY 416
Query: 602 KKAIK 606
++A++
Sbjct: 417 EEALE 421
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA ++ AIS ++++++ P +A +G A E A+ + + I+
Sbjct: 371 NRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALESWEQTIEIE 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG LG EAI +KAL+ +P+ + ++RGI A+
Sbjct: 431 PNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLDQNKEAISS 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL +IG +K+A + KA++L N + + Y +
Sbjct: 491 FDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPNDPMIFYNKACCYALQS 550
Query: 566 NSEKALECL 574
N+E A+E L
Sbjct: 551 NTEDAIEYL 559
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G Y AI+ +++ LK P E RG A + + AIS F + ++ P
Sbjct: 440 RGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLDQNKEAISSFDKTLEIKP 499
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A +G EA+ + +KALE +PN I + +
Sbjct: 500 DFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPNDPMIFYNK----------------- 542
Query: 507 SACVKLDKENKSAYTYLGLALS-SIGEYKK 535
+ C L + A YL LA++ + EY++
Sbjct: 543 ACCYALQSNTEDAIEYLSLAIALAPDEYRE 572
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 15 KTHKTICEIDELVRVDSVMASAITAR---IELAKLCSLR-NWSKAIRILDSLL--AQSYE 68
+THK I EI EL+ D + +S+ EL L + ++ AIR D L +Y
Sbjct: 208 RTHK-ILEIRELL--DEIPSSSNQRSGLFFELGTLFAAEADYQSAIRAYDQALNFKPNYH 264
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
Q NR Y+ LE+H+ + CDKAL+L P+ +A+ +G A LGR EA+ ++K
Sbjct: 265 -QAWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWNNRGVALVDLGRYTEAVESFDK 323
Query: 129 GYEH 132
++
Sbjct: 324 ALKY 327
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 48 SLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++AI D LA S +IQ NR + +L+ H+ I +K +++ P +A+
Sbjct: 344 NLGQYAEAISSFDRALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAW 403
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
KG A LG EEAL WE+ E
Sbjct: 404 YNKGVALFNLGMYEEALESWEQTIE 428
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L +++A+ D L + ++ N R + L + I D+AL ++ +Q
Sbjct: 308 LVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAINSNDIQ 367
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ +G AF L + E+A+S W K E
Sbjct: 368 AHYNRGIAFGKLDQHEKAISSWNKVIE 394
>gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 530
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 8/279 (2%)
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--- 386
K+ ++D+ + D T+ +S+L F+ ++ E + + K+ ++ D+ L+
Sbjct: 227 KAYLTDSPNLDPTK-QSELWFEKGLIHTQQAEYEA----AIASYDKALQLTPDYDLAWNN 281
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P EA RG A + + AI+ F +A+Q P
Sbjct: 282 RGIALANVGRFDKAIASYDKALQLTPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKP 341
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG S EAI KAL+ +P+ + RG + F+ A+
Sbjct: 342 DDHQAWNNRGYALRQLGRSDEAIASYDKALQLKPDDHQAWNNRGYALRQLGRFDEAIASY 401
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L + A+ G+AL +G + +A ++ KA+QL ++ +AW + + L
Sbjct: 402 YKALQLKPDYYEAWHNRGIALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGR 461
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ + L + +A++ RG+ L LG+ +AI
Sbjct: 462 FDEAIASYDKALQLKPDDHQAWYNRGIALGNLGRLDEAI 500
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 10/207 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RGIA N G+ AI+ FD+ L+ P +A RG A R R E AI+ + +A+Q
Sbjct: 315 NRGIALFNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDE-AIASYDKALQL 373
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG A LG EAI KAL+ +P+ + H RGI K F+ A+
Sbjct: 374 KPDDHQAWNNRGYALRQLGRFDEAIASYYKALQLKPDYYEAWHNRGIALRKLGRFDEAIA 433
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
++L + A+ G+AL +G + +A ++ KA+QL + +AW G+L
Sbjct: 434 SYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLKPDDHQAWYNRGIALGNL 493
Query: 558 TQFYQDLANSEKALEC-LQQVLYIDKR 583
+ + +A+ +KAL+ + +YI+ R
Sbjct: 494 GRLDEAIASFDKALQLKPDEEIYINNR 520
>gi|443313574|ref|ZP_21043185.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
gi|442776517|gb|ELR86799.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
Length = 289
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S+ +F +G+ QV KY +AI+ F + L+ P Y EAL RG A E AI+
Sbjct: 10 SLEAEFLFHQGVHQVKAEKYEAAIACFTRALRYKPDYSEALSQRGFALGSLGRHEDAIAS 69
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+ P A W RG A LG +EAI +ALEF P+S+ + H RGI +
Sbjct: 70 FDKALMIRPDACWLWHNRGIALGKLGRYIEAINSFDRALEFNPDSSTVWHNRGITWSDYG 129
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
F A+ +KL A+ G AL + ++A + ++I+ + W H
Sbjct: 130 VFEKAIASFDRALKLQPNAYWAWYNRGTALRQLQRGEEALNSFDRSIEFKPDGFLPWYHR 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D E A+ + L I ++ ++ GL L + +++ AI
Sbjct: 190 GLILSDWGKHENAVASFHRALEIQPDCNRTWYNLGLNLGKIKRYEDAI 237
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y AI+ FD+ L+ +P RG + E AI+ F A++
Sbjct: 86 NRGIALGKLGRYIEAINSFDRALEFNPDSSTVWHNRGITWSDYGVFEKAIASFDRALKLQ 145
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A AW RG A L EA+ +++EF+P+ + RG++ + AV
Sbjct: 146 PNAYWAWYNRGTALRQLQRGEEALNSFDRSIEFKPDGFLPWYHRGLILSDWGKHENAVAS 205
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + LGL L I Y+ A A + ++L + W H + +
Sbjct: 206 FHRALEIQPDCNRTWYNLGLNLGKIKRYEDAIAAFDRVLELKPDDYWGWYHRGVALEQVG 265
Query: 566 NSEKA 570
E+A
Sbjct: 266 RQEEA 270
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RGI + G + AI+ FD+ LK P A RGTA R QR E A++ F +I+
Sbjct: 120 NRGITWSDYGVFEKAIASFDRALKLQPNAYWAWYNRGTALRQLQRG-EEALNSFDRSIEF 178
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P W RG + G+ A+ +ALE +P+ + G+ K K + A+
Sbjct: 179 KPDGFLPWYHRGLILSDWGKHENAVASFHRALEIQPDCNRTWYNLGLNLGKIKRYEDAIA 238
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++L ++ + + G+AL +G ++A+ +H KAI +
Sbjct: 239 AFDRVLELKPDDYWGWYHRGVALEQVGRQEEADISHNKAIAI 280
>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 297
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 23/241 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A VN+GKY A+ ++D+ L DP +G A + A+ F +AIQ NP
Sbjct: 10 KGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINP 69
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--NFKFKD-----F 499
+ AW +G LG + EA+ + ++ +PN A + RG+ N D F
Sbjct: 70 NDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDA-AWYNRGMALDNLGRNDEALECF 128
Query: 500 NAAVE----DLSACVK----LDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAI 544
N A++ +LSACVK LDK K+ +T G+AL I + +A E + +A+
Sbjct: 129 NQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEAL 188
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ RN++ W + L +ALEC Q + I+ + ++ +G+ L L ++ +A
Sbjct: 189 KISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEA 248
Query: 605 I 605
+
Sbjct: 249 V 249
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 23/207 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI G+ A+ FDQ +K DP A RG A + A+ F +AIQ N
Sbjct: 77 NKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGRNDEALECFNQAIQIN 135
Query: 446 PSAGEA----------------------WKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P+ A W +G A + + EA++ +AL+ N
Sbjct: 136 PNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEALKISRNYM 195
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+GI+ K N A+E + ++++ + + + G+AL + +A A +A
Sbjct: 196 WPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEAVMAFDQA 255
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKA 570
I+LD N AW + ++L S++A
Sbjct: 256 IKLDPNSAVAWKNKGIALENLDKSDEA 282
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGRGTARAFQR------- 429
+RG+A N G+ A+ F+Q ++ +P A IG+ R R
Sbjct: 110 NRGMALDNLGRNDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGV 169
Query: 430 ------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+L A+ + EA++ + + W +G L EA++ ++A++ PN A
Sbjct: 170 ALEKIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDA 229
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ +++G+ K + AV +KLD + A+ G+AL ++ K++EAH A
Sbjct: 230 TVWNDKGVALGKLNRNDEAVMAFDQAIKLDPNSAVAWKNKGIALENL---DKSDEAH-NA 285
Query: 544 IQLDR 548
+++R
Sbjct: 286 FEMER 290
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+AL + G+Y KA + + KA+ +D N W + +L +++ALEC
Sbjct: 2 ENATELCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECF 61
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + I+ + A+ +G+ L LG++ +A+
Sbjct: 62 NQAIQINPNDAWAWSNKGITLGKLGRNDEAV 92
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L E+G+ ++ A++ + +D N + + G+AL +G +A E +AIQ
Sbjct: 7 LCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQ 66
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N AW + L +++A+ Q + ID A++ RG+ L LG++ +A+
Sbjct: 67 INPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPN-DAAWYNRGMALDNLGRNDEAL 125
Query: 606 K 606
+
Sbjct: 126 E 126
>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
archaeon]
Length = 739
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 116/220 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ D+ ++ +P + EA +G A E AI+ +AI++N
Sbjct: 436 NKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETN 495
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A + LG+ EAI KA+E A +GI + A+
Sbjct: 496 PQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAA 555
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+ G+ALS +G+Y++A AH KAI+++ + AW + + L
Sbjct: 556 CDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLG 615
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + + I+ ++++A++ +G+ L LG+++ AI
Sbjct: 616 RYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAI 655
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y AI+ D+ ++ + Y A +G A E AI+ + +AI+ N
Sbjct: 368 NKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEIN 427
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A LG EAI KA+E P A+ + +G K + A+
Sbjct: 428 PQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAA 487
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + A+ GLALS +G+Y++A AH KAI+++ + AW + L
Sbjct: 488 CDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLG 547
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + I+ R ++A++ +G+ L GLG++++AI
Sbjct: 548 RYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAI 587
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I ++ + +R G+A + G+ AI+ +D+ ++ +P + A +G A
Sbjct: 388 KAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRY 447
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ +AI+ NP EAW +G A LG EAI KA+E P A+ + +G+
Sbjct: 448 EEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGL 507
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ ++++ + A+T G+AL +G Y++A A AI+++
Sbjct: 508 ALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDA 567
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + L E+A+ + + I+ +++ A++ +G+ L GLG++++AI
Sbjct: 568 EAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAI 621
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A GKY AI+ D+ ++ + Y A +G A E AI+ AI+ N
Sbjct: 504 NKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEIN 563
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A + LG+ EAI KA+E A + +G+ + A+
Sbjct: 564 PRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAA 623
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+++ + A+ G+AL +G+Y+ A A+ AI+++ + +AW + DL
Sbjct: 624 YDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLG 683
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E+A+ + I+ + ++A++ +G++L G++++A
Sbjct: 684 RYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEA 722
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 5/234 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++ +D + + +GI G+ AI+ +D+ ++ + Y +A +G +
Sbjct: 286 KAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKY 345
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ F +AI+ P EAW +G A LG EAI KA+E A + +G+
Sbjct: 346 EEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGV 405
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
A+ ++++ + A+ G AL +G Y++A A KAI+++ F
Sbjct: 406 ALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFA 465
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + L E+A+ + + + ++++A++ +GL L GLG++++AI
Sbjct: 466 EAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAI 519
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ D+ ++ +P Y EA +G A + + E AI+ +AI+ N
Sbjct: 470 NKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEIN 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
AW +G A LG EAI A+E P A+ + +G+ + A+
Sbjct: 530 SQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAA 589
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+ G+AL +G Y++A A+ +A++++ + EAW + L
Sbjct: 590 HDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLG 649
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + I+ +++ A+ +G+ L LG++++AI
Sbjct: 650 KYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAI 689
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ D+ ++ DP Y + +G E AI+ + +AI+ N +AW +G
Sbjct: 281 LQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLG 340
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
LG+ EAI +KA+E +P A+ + +G + A+ ++++ + A+
Sbjct: 341 KLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+AL +G ++A A+ KAI+++ F AW + L E+A+ + + I
Sbjct: 401 NNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEI 460
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F++A++ +G L LG++++AI
Sbjct: 461 NPQFAEAWNNKGAALGKLGRYEEAI 485
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 218/533 (40%), Gaps = 78/533 (14%)
Query: 51 NWSKAIRILDSLLAQSYE--IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
N++ AI S A+ YE +C A CY ++ DKA+++DP Q +
Sbjct: 243 NFTSAITFFTS--AKDYENCSSTLCYIASCYYFNSNLNKSLQYLDKAVEIDPQYAQIWNN 300
Query: 109 KGCAFSALGRKEEALSVWEKG------YEHALH-QSADLKQFLELEELLTAAKQDRSV-- 159
KG LGR EEA++ ++K Y A + + A L + + EE + A + +
Sbjct: 301 KGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIKP 360
Query: 160 TCEYDVSN---SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH 216
C +N ++ L E + A+DK E + + ++ ++ V+
Sbjct: 361 QCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARA------WNNKGVA-------- 406
Query: 217 DPDLCN-GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDG-----SKSTHASRDA 270
LC+ GR++EA + + IN + + N+ G++ G ++ A A
Sbjct: 407 ---LCDLGRNEEA-----IAAYDKAIEINPQFAG-AWNNKGAALGKLGRYEEAIAACDKA 457
Query: 271 SEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSD---SASLNDSNTNSES 327
EIN Q ++ ++ +K + + GR + ++ + + N+
Sbjct: 458 IEINPQFAEAWN------NKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSG 511
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK--------SI 379
K + + E S+ + W NK + + + + +I
Sbjct: 512 LGKYEEAIAAHDKAIEINSQYAGAW-----------TNKGIALCHLGRYEEAIAACDNAI 560
Query: 380 SVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ R + +G+A GKY AI+ D+ ++ + Y A +G A E A
Sbjct: 561 EINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEA 620
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ + EA++ NP EAW +G A LG+ AI A+E P AD +G+
Sbjct: 621 IAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALS 680
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ A+ ++++ + A+ G+ L G Y++A+EA KA ++D
Sbjct: 681 DLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEID 733
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
F L ++ +A++ +P + W +G LG + EAI KA+E A
Sbjct: 273 FNSNLNKSLQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAW 332
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G K + A+ + +++ + A+ G AL +G Y++A AH KAI++
Sbjct: 333 NNKGATLGKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEI 392
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + AW + DL +E+A+ + + I+ +F+ A++ +G L LG++++AI
Sbjct: 393 NSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAI 451
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + GKY AI+ +D ++ +P Y +A +G A + E AI+ + AI+ N
Sbjct: 640 NKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAIAAYDNAIEIN 699
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
P EAW +G G EA + KA E +P
Sbjct: 700 PQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDP 734
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I DE V ++ A A + LC L + AI D+ + + + D
Sbjct: 614 LGRYEEAIAAYDEAVEINPQYAEAWNNK--GIALCHLGKYEGAIAAYDNAIEINPQYADA 671
Query: 73 -CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ S L ++ I D A++++P L +A+ KG GR EEA +EK +E
Sbjct: 672 WTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHE 731
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I D+ + ++S A A + LC L +AI D + + +
Sbjct: 376 LGRYEEAIAAHDKAIEINSQYARAWNNK--GVALCDLGRNEEAIAAYDKAIEINPQFAGA 433
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + +L ++ I CDKA++++P +A+ KG A LGR EEA++ +K E
Sbjct: 434 WNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIE 493
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I D+ + ++ A A + A L L + +AI D + + + +
Sbjct: 410 LGRNEEAIAAYDKAIEINPQFAGAWNNK--GAALGKLGRYEEAIAACDKAIEINPQFAEA 467
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + +L ++ I CDKA++ +P +A+ KG A S LG+ EEA++ +K E
Sbjct: 468 WNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIE 527
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 83/462 (17%), Positives = 180/462 (38%), Gaps = 59/462 (12%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L + + I D+ + ++S A A + A L L + +AI + + EI+
Sbjct: 307 KLGRNEEAIAAYDKAIEINSQYAKAWNNK--GATLGKLGKYEEAIAAFNKAI----EIKP 360
Query: 72 IC-----NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
C N+ L ++ I DKA++++ +A+ KG A LGR EEA++ +
Sbjct: 361 QCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAY 420
Query: 127 EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMS 186
+K +E+ A ++ ++ L E + A DK
Sbjct: 421 DKA--------------IEINPQFAGAWNNKGA--------ALGKLGRYEEAIAACDKAI 458
Query: 187 ETSEN-----HNKSDICDSSSQSRDVSETCSKS-SHDPDLCNGRSDEAKGGSSVPVSKSG 240
E + +NK + + C K+ +P +++ S + +
Sbjct: 459 EINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEA 518
Query: 241 LHINGKLREVSENHNG--SSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHG 298
+ + K E++ + G ++ G H R I ++ D I P D + N + G
Sbjct: 519 IAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAI---AACDNAIEINPRDAEAWNNK-G 574
Query: 299 RQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET 358
+G + +++ ++ ++ + +++ ++ E+ + ++ +
Sbjct: 575 VALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQY 634
Query: 359 SNEAKRNKKFCVTRISKSK--------SISV-----DFRLSRGIAQVNEGKYASAISIFD 405
+ EA NK + + K + +I + D ++G+A + G+Y AI+ +D
Sbjct: 635 A-EAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAIAAYD 693
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
++ +P EA +G + E A F +A + +P+
Sbjct: 694 NAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDPT 735
>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
Length = 452
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP EA RG QR L+ A++D+ +AI+ P +AW RG A G++ +A++
Sbjct: 128 DPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVK 187
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+ +AL +PN A RG K N AV D ++LD Y GL +++
Sbjct: 188 NFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDPRVPEYYDNRGLTYAAM 247
Query: 531 GEYKKAEEAHLKAIQLDR--NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
GEY KA + +AI+ ++ NFL G QF +L AL + L +D F+K Y
Sbjct: 248 GEYDKAIADYDQAIRREQRANFLTNRGDSYQFKGELG---AALSDYEAALKLDPNFAKTY 304
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
+ R +L +G+ KKA+ D +
Sbjct: 305 NNRAVLYKKMGERKKALADYET 326
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 402 SIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-R 459
+I DQ AL+ R A A L A+ D AI + +AW+ RG R
Sbjct: 49 AIIDQTANSASERSLALVARAEANARISGGLSQALRDLDRAIALDGRNAKAWRVRGDLLR 108
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G+ A DL+KA+E +P A+ RG+V + + A+ D +KL ++ A
Sbjct: 109 EAGGDLNRAAADLTKAIELDPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQA 168
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++ G+A G+ +KA + +A++LD N + + Y+ L KA+ + +
Sbjct: 169 WSDRGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIR 228
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+D R + Y RGL +G++ KAI D R
Sbjct: 229 LDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIR 262
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G A+ FD+ L+ DP RG A +L A++D EAI+ +P
Sbjct: 172 RGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDP 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVED 505
E + RG AA+GE +AI D +A+ E A+ L RG +++FK + AA+ D
Sbjct: 232 RVPEYYDNRGLTYAAMGEYDKAIADYDQAIRRE-QRANFLTNRGD-SYQFKGELGAALSD 289
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A +KLD Y + +GE KKA + A++LD
Sbjct: 290 YEAALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLD 331
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++I +D R+ +RG+ G+Y AI+ +DQ ++ + L RG + F+ E
Sbjct: 224 GEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRRE-QRANFLTNRGDSYQFKGE 282
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L AA+SD+ A++ +P+ + + R +GE +A+ D AL+ +P + + + R
Sbjct: 283 LGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGNENATNGRR 342
Query: 491 IVNFKFKDFNA 501
++ + F A
Sbjct: 343 VMIAEIAKFGA 353
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +AIQ NP+ +A+
Sbjct: 110 QGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYY 169
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A + G+ EAI KA++ PN AD + G+ F + A+ ++LD
Sbjct: 170 NLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLD 229
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ +AY LG AL G+ ++A A+ KAIQL+ N EA+ +L D ++A+
Sbjct: 230 PNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAA 289
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q+ + ++ F+ AY+ G L G+ +AI
Sbjct: 290 YQKAIQLNPNFALAYNGLGNALSDQGKRDEAI 321
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +AIQ NP+
Sbjct: 138 GNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A G+ EAI KA++ +PN A+ + G +K A+
Sbjct: 198 YADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQ 257
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ L D
Sbjct: 258 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKR 317
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + ++ F+ AY+ G L G+ +AI
Sbjct: 318 DEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAI 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA ++GK AI+ + + ++ +P Y +A G A Q +L+ AI+ + +AIQ +P+
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPN 231
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA++ PN A+ + G+ + A+
Sbjct: 232 DANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 291
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG ALS G+ +A A+ KAIQL+ NF A+ L D
Sbjct: 292 KAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKR 351
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + +D + AY+ GL L G+ +AI
Sbjct: 352 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAI 389
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 5/263 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR-----GIAQVNEGKYASAIS 402
LS D L + A + K+ + I +D L+ G A +GK AI+
Sbjct: 25 LSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIA 84
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ + ++ +P +A G A +Q +LE AI+ + +AIQ NP+ +A+ G A +
Sbjct: 85 AYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQ 144
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI KA++ PN + GI A+ ++L+ AY
Sbjct: 145 GKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYN 204
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG+AL G+ +A A+ KAIQLD N A+ +L E+A+ Q+ + ++
Sbjct: 205 LGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264
Query: 583 RFSKAYHLRGLLLHGLGQHKKAI 605
++AY+ G+ L G+ +AI
Sbjct: 265 NLAEAYNNLGVALSDQGKRDEAI 287
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 113/218 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ +P + A G G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A + G+ EAI KA++ +PN A+ + G+ + A+
Sbjct: 334 FALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQ 393
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG AL S G+ ++A A+ KAIQL+ NF A+ +L D
Sbjct: 394 KAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKR 453
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q+ + ++ F+ AY+ G L G+ +AI
Sbjct: 454 DEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAI 491
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G A ++GK AI+ + + ++ +P +
Sbjct: 278 SDQGKRDE--AIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFA 335
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G G A + Q + + AI+ + +AIQ +P+ A+ G A G+ EAI KA
Sbjct: 336 LAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKA 395
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 396 IQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDE 455
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D +A+ Q+ + ++ F+ AY+ G L
Sbjct: 456 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNAL 515
Query: 596 HGLGQHKKAI 605
G+ +AI
Sbjct: 516 KDQGKLNEAI 525
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G A ++GK AI+ + + ++ DP
Sbjct: 312 SDQGKRDE--AIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDA 369
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI KA
Sbjct: 370 NAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKA 429
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 430 IQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNE 489
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A + KAIQL+ NF A+ +L +D +A+ Q+ L
Sbjct: 490 AIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 532
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 369 CVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ ++ +F L+ G A ++GK AI+ + + ++ +P + A G A
Sbjct: 422 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 481
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE------ 479
+ Q +L AI+ + +AIQ NP+ A+ G A G+ EAI KAL
Sbjct: 482 SDQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVT 541
Query: 480 PNSADIL--HERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P +A L + G+V A+ + A +K+D +
Sbjct: 542 PTTAHTLAHNNLGLVYQPEGKLEEALREYEAALKIDPK 579
>gi|414079262|ref|YP_007000686.1| hypothetical protein ANA_C20172 [Anabaena sp. 90]
gi|413972541|gb|AFW96629.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 619
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + KY A S F Q ++ D Y EA R + A+ D +A++ +P
Sbjct: 360 RGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYRKALQDSNKALKIDP 419
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +A+ RGQAR L + AIQD +K++ F+P + RG+ ++ +D+ A+ED
Sbjct: 420 SCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDC 479
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD AY GLA+ I +Y +A + +AI+LD +++ + + L N
Sbjct: 480 TEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRN 539
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AL + Q + I+ ++AY +G + G+ K+AI+
Sbjct: 540 LGSALSDIDQAIQINPEIAEAYTDKGFIHLISGRKKEAIQ 579
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 397 YASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------A 448
Y AI + I+ P +YP A RG A +AAI DF + I P
Sbjct: 229 YKEAIEFYTAIINIKPDLYP-AYHYRGYAYYLLDNYQAAIDDFRQIIHFKPHNLLTYLLL 287
Query: 449 GEAWKRRGQARAALGESVEAI---QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ ++ +AAL + AI L K L+ I + G + K ++ A+E+
Sbjct: 288 TSVFIKKLDYQAALEQCKIAIILNNHLDKELDIL-----IYIQCGWIFNKIGNYEEAIEN 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + + Y G + + +Y+ A +AI+LD +++EA+G+ + L
Sbjct: 343 FNEAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLK 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N KAL+ + L ID + AY RG GL Q+K AI+D +
Sbjct: 403 NYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYT 446
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A+ +Y AI + + + DP A RG A+ + + AI D TEA
Sbjct: 423 DAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDCTEA 482
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P+ A+ RG A + + AI D ++A++ + A + RG + ++ +
Sbjct: 483 LKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRNLGS 542
Query: 502 AVEDLSACVKLDKENKSAYT 521
A+ D+ ++++ E AYT
Sbjct: 543 ALSDIDQAIQINPEIAEAYT 562
>gi|434385884|ref|YP_007096495.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
gi|428016874|gb|AFY92968.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
Length = 1119
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG + G+ A AI + + + DP Y +GRG A+ + AI D++ AI
Sbjct: 831 FDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITL 890
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A EA+ RG A+ LG+ EAI+D S A+ P A + RG + AA++
Sbjct: 891 NPQAAEAYFGRGTAKYNLGQHREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAID 950
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
D + + ++ ++ AY G A S+G+++ A + + I ++ EA+ G T Y +
Sbjct: 951 DYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKY-N 1009
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L + A++ + ++ + + AY+ RGL LG+ ++AI D
Sbjct: 1010 LGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDD 1053
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 352 WDMLKET----SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
WD E +E RN+ C+ R S + ++++ R + I +N+ Y S +++
Sbjct: 769 WDKAVEIWGKLGDEDGRNR--CLLRSSINNCVAIEDRSGQNIEAIND--YDS-----ERV 819
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ DP +A RGT + + AI D++ AI +P + RG A+ LG+ E
Sbjct: 820 IEIDPQDAKAYFDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVYVGRGAAKYNLGQHRE 879
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI D S+A+ P +A+ RG + A+ED S + L+ ++ AY G A
Sbjct: 880 AIDDYSRAITLNPQAAEAYFGRGTAKYNLGQHREAIEDYSHAITLNPQDAFAYYNRGFAK 939
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+G+Y+ A + + I ++ ++A+ L + A++ V+ I+ + ++A
Sbjct: 940 HSLGQYQAAIDDYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEA 999
Query: 588 YHLRGLLLHGLGQHKKAIKD 607
Y RG + LGQH+ AI D
Sbjct: 1000 YVGRGTAKYNLGQHQAAIDD 1019
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I++D + RG A+ N G++ AI + + + +P EA GRGTA+ +
Sbjct: 851 SRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITLNPQAAEAYFGRGTAKYNLGQ 910
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI D++ AI NP A+ RG A+ +LG+ AI D + + P D RG
Sbjct: 911 HREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAIDDYNCVIMINPQDIDAYFRRG 970
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
AA++D + + ++ + AY G A ++G+++ A + AI L+
Sbjct: 971 AARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNLGQHQAAIDDCNFAITLNPQA 1030
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + L +A++ + ++ +++ AY+ RGL + LGQ + AI D
Sbjct: 1031 TDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYNRGLSKYNLGQSQAAIPDF 1088
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
CV I+ +D RG A+ + G++ +AI ++ ++ +P EA +GRGTA+
Sbjct: 954 CVIMINPQ---DIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNL 1010
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ +AAI D AI NP A +A+ RG A+ +LG EAI D + A+ P A +
Sbjct: 1011 GQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYN 1070
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL-DKENK 517
RG+ + AA+ D +L D+EN+
Sbjct: 1071 RGLSKYNLGQSQAAIPDFIKATELFDRENQ 1100
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G+Y +AI ++ ++ +P +A RG AR + +AAI D+ I N
Sbjct: 934 NRGFAKHSLGQYQAAIDDYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMIN 993
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A EA+ RG A+ LG+ AI D + A+ P + D + RG+ A++D
Sbjct: 994 PQAAEAYVGRGTAKYNLGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDD 1053
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + L+ + AY GL+ ++G+ + A +KA +L
Sbjct: 1054 YNFAITLNPQYAVAYYNRGLSKYNLGQSQAAIPDFIKATEL 1094
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 37/158 (23%)
Query: 463 GESVEAIQDL--SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+++EAI D + +E +P A +RG ++ A++D S + +D + Y
Sbjct: 805 GQNIEAINDYDSERVIEIDPQDAKAYFDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVY 864
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G A ++G++++A + + +AI L+
Sbjct: 865 VGRGAAKYNLGQHREAIDDYSRAITLN--------------------------------- 891
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ ++AY RG + LGQH++AI+D S T+ P
Sbjct: 892 -PQAAEAYFGRGTAKYNLGQHREAIEDYSHAI-TLNPQ 927
>gi|334116936|ref|ZP_08491028.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
gi|333461756|gb|EGK90361.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
Length = 732
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G AI + Q +K P + +AL RG AR + A+ DFT+ ++ NP
Sbjct: 382 RANARYDMGATEQAIQDYTQAIKVHPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S GEA+ +RG A LG+ AI+D ++A+ PN A RG+ D A+ D
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADF 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ + Y G A ++ +Y+ A E + KAI+L + +A+ + Y +LA
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KA+ + + + + AY+ R + L Q +KA +D S
Sbjct: 562 YDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCS 604
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG A+A Q + AI+D+T+AI N E + +R AR +G + +AIQD ++A++
Sbjct: 346 FARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKV 405
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P+ L+ RG+ D AVED + V+L+ + AY+ GLA +G+Y+ A E
Sbjct: 406 HPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIE 465
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI+L N A+ + + A+ Q L I + + Y+ RG L
Sbjct: 466 DYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNL 525
Query: 599 GQHKKAIKDLS 609
++ A++D +
Sbjct: 526 ADYQGAMEDYT 536
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+++ G A+ F Q+++ +P EA RG A + AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+A G+ A+ D ++AL+ P A + + RG F D+ A+ED
Sbjct: 475 PNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AYT A ++ Y KA + I+L A+ + Y +L
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLK 594
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+KA E + ++ KAY RGL G + A++D + R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIR 642
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A+ +G AI+ + Q + + E R AR E AI D+T+AI+
Sbjct: 346 FARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKV 405
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS +A RG AR +G+ A++D ++ + P+ + +RG+ + D+ A+E
Sbjct: 406 HPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIE 465
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L + +AY+ GLA S+ G+ A +A+Q+ + + +L
Sbjct: 466 DYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNL 525
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
A+ + A+E + + + + AY R L + KAI D + G R
Sbjct: 526 ADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIR 574
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A++ F Q L+ P RG AR + + A+ D+T+AI+
Sbjct: 483 NRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQ 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R A L +AI D ++ + P + R I K F A ED
Sbjct: 543 PDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASED 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ N AY+ GLA + G+ + A E +AI+L+ + A+ + Y +L
Sbjct: 603 CSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELK 662
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
N A+E L ++ + + A++ RGL+ L AI+D + +
Sbjct: 663 NYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLKDRAGAIEDFQKAATLFL 713
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ N Y A+ + + ++ P +A R +A + AI+D TE I+
Sbjct: 517 SRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLA 576
Query: 446 P----------------------------------SAGEAWKRRGQARAALGESVEAIQD 471
P + +A+ RG AR A G+ A++D
Sbjct: 577 PKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVED 636
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A+ P+ A RG + + K++ AVED + ++L+ +N SA+ GL +
Sbjct: 637 FTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLK 696
Query: 532 EYKKAEEAHLKAIQLDRNFLE 552
+ A E KA L FLE
Sbjct: 697 DRAGAIEDFQKAATL---FLE 714
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 34/169 (20%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + W RG A+A G++ AI D ++A+ A+ ++R + A++
Sbjct: 338 SPGRAKEWFARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQ 397
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K+ + A G+A IG+ + A
Sbjct: 398 DYTQAIKVHPSHTKALYNRGMARLDIGDKRGA---------------------------- 429
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+E QV+ ++ +AY RGL + LG ++ AI+D + R
Sbjct: 430 ------VEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIR 472
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 118/221 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A G+Y A++ +D L+ DP Y A +G A + E A++ + +++ +
Sbjct: 37 NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEID 96
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG ALG EA++ +ALE +P A +G V + D+N ++E
Sbjct: 97 PDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIEC 156
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D ++ A+ LG +L + GEY+++ E + +A+++D + AW + L
Sbjct: 157 YERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLG 216
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++AL+C ++ L I+ A + +G+ L LG+ ++A++
Sbjct: 217 RHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVE 257
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y +I +++ L+ DP EA G + E E +I + EA++ +P AW
Sbjct: 148 GDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNN 207
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EA+ +AL+ EP+ L+ +GI AVE A +K+D
Sbjct: 208 KGIALGTLGRHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDP 267
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G+AL +G ++A ++ +A++LD + +AW + L E+AL+
Sbjct: 268 SYPPAWYNRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSY 327
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q+ L ID +S+A++ +G+ LG++++AI
Sbjct: 328 QRALEIDPAYSQAWYNQGVAFSALGRYQEAI 358
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 110/204 (53%)
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
++ + +E+P+YP A +G A + E A++ + A++ +P AW +G A +A
Sbjct: 19 AVGEGYAEENPLYPLAWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSA 78
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG + EA+ +++LE +P+ A + RG+V + A+E +++D A++
Sbjct: 79 LGRNEEALACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWS 138
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G S G+Y ++ E + +A+++D EAW +L + E+++E + L ID
Sbjct: 139 NQGGVFYSRGDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKID 198
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAI 605
++ A++ +G+ L LG+H++A+
Sbjct: 199 PLYATAWNNKGIALGTLGRHQEAL 222
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C K + V ++GIA G+ A+ +D +LK DP YP A RG A
Sbjct: 224 CYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLL 283
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A + + EA++ +P +AW RG A +LG EA+Q +ALE +P + +
Sbjct: 284 GRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYN 343
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + A+ ++LD E A+ G+ALS++G +++A E + +A+++
Sbjct: 344 QGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYERALEVG- 402
Query: 549 NFLEAWGHLTQ 559
L + G+LT+
Sbjct: 403 --LASAGNLTK 411
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y +I +D+ LK DP+Y A +G A + A+ + EA++ PS A
Sbjct: 182 GEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYN 241
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EA++ L+ +P+ + RG+ A +KLD
Sbjct: 242 KGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEALKLDP 301
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G+AL S+G ++A +++ +A+++D + +AW + + L ++A+
Sbjct: 302 GYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYNQGVAFSALGRYQEAISSY 361
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L +D S+A++ +G+ L LG+H++AI+
Sbjct: 362 DRALELDPELSEAWNNKGIALSALGRHQEAIE 393
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + DE +++D A A R I L L +L+++ +A+ I D +Q++
Sbjct: 283 LGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEI-DPAYSQAW 341
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
N+ +S L ++ I D+AL+LDP L +A+ KG A SALGR +EA+ +E
Sbjct: 342 -----YNQGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYE 396
Query: 128 KGYEHALHQSADLKQ 142
+ E L + +L +
Sbjct: 397 RALEVGLASAGNLTK 411
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ S+L ++ + D AL+LDP A+ KG A SALGR EEAL+ + + E
Sbjct: 37 NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLE 94
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L + D+AL+LDP QA+ +G A +LGR+EEAL +++ E
Sbjct: 275 NRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALE 332
>gi|166363102|ref|YP_001655375.1| hypothetical protein MAE_03610 [Microcystis aeruginosa NIES-843]
gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 1179
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY A+S + + + +P + EA + RG ++ E A+SD+T+AI N
Sbjct: 725 NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDIN 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + L + A+ D SKA++ PN A + RG++ + ++ A+ D
Sbjct: 785 PNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSD 844
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+ S + +Y A + KAI ++ N+ EA+ + Y++L
Sbjct: 845 YTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQ 904
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E AL + + I+ +++AY RG L L +++ A+ D S
Sbjct: 905 KYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYS 948
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 368 FCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
++ SK+ I+ ++ ++ RG+ + KY A+S + + + +P Y EA + RG
Sbjct: 806 LALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVL 865
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ ++ + A+SD+++AI NP+ EA+ RG L + A+ D SKA++ PN A+
Sbjct: 866 YSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAE 925
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG + + + A+ D S + ++ + Y G + +Y A + KAI
Sbjct: 926 AYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAI 985
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++ N+ +A+ + Y++L E AL + + I+ +F++AY+ RGLL + ++ A
Sbjct: 986 EINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLA 1045
Query: 605 IKDLS 609
+ D S
Sbjct: 1046 LSDFS 1050
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + KY A+S + + + +P Y EA + RG ++ E A+SD+++AI
Sbjct: 860 VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDI 919
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG L + A+ D SKA++ PN A + + RG + + + ++ A+
Sbjct: 920 NPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALS 979
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++++ AY G ++ +Y+ A + KAI ++ F EA+ + Y +
Sbjct: 980 DYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQ 1039
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AL + + I+ + AY+ RG L L +++ A+ D S
Sbjct: 1040 QKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYS 1084
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 115/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ KY A+S +++ ++ +P + +A RG ++ E A+SD+++AI N
Sbjct: 691 NRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYELALSDYSKAIDIN 750
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG L + A+ D +KA++ PN A + RG + + ++ A+ D
Sbjct: 751 PKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNLYSDLQKYDLALSD 810
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + ++ AY G+ S + +Y A + KAI ++ N+ EA+ + Y DL
Sbjct: 811 YSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQ 870
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AL + + I+ +++AY RG L L +++ A+ D S
Sbjct: 871 KYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYS 914
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFD 405
D N K +K+ + SK+I ++ + + A VN G KY A+S +
Sbjct: 721 DAYNNRGNLYKNLQKYELALSDYSKAIDINPKFAE--AYVNRGNLYKNLQKYELALSDYT 778
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ + +P Y A RG + ++ + A+SD+++AI NP+ A+ RG + L +
Sbjct: 779 KAIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKY 838
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
A+ D +KA++ PN A+ RG++ + ++ A+ D S + ++ AY G
Sbjct: 839 DLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGN 898
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
++ +Y+ A + KAI ++ N+ EA+ + Y++L E AL + + I+ +
Sbjct: 899 LYKNLQKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDA 958
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLS 609
K Y+ RG L + ++ A+ D S
Sbjct: 959 KVYYNRGNLYYNQQKYDLALSDYS 982
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 367 KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ ++ SK+ I+ ++ ++RG N KY A+S + + + +P + RG
Sbjct: 907 ELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGN 966
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
Q++ + A+SD+++AI+ NP+ +A+ RG L + A+ D SKA++ P A
Sbjct: 967 LYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFA 1026
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG++ + + ++ A+ D S + ++ + AY G S + +Y+ A + KA
Sbjct: 1027 EAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKA 1086
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I ++ N+ A+ + Y + + AL + + I+ + AY R +L LGQ +K
Sbjct: 1087 IDINPNYANAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYVSRSILYAILGQPEK 1146
Query: 604 AIKDL 608
DL
Sbjct: 1147 VKIDL 1151
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 380 SVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++D + +A N G KY A+S + + + +P Y A RG + ++ +
Sbjct: 780 AIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYD 839
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+SD+T+AI NP+ EA+ RG + L + A+ D SKA++ PN A+ RG +
Sbjct: 840 LALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNL 899
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ D S + ++ AY G ++ +Y+ A + KAI ++ N +
Sbjct: 900 YKNLQKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAK 959
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y + + AL + + I+ ++KAY+ RG L L +++ A+ D S
Sbjct: 960 VYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYS 1016
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF S G + Y A+++ +Q + P P + + + ++ T+A
Sbjct: 620 DFSTSAGREREARENYEQALTVINQAISLLPNNPNYYNEKWAVLDKLKRYDEGLAAITQA 679
Query: 442 IQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P A AW RG L + A+ D +KA+E PN AD + RG + + +
Sbjct: 680 IDLAPRA--AWYSNRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYE 737
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D S + ++ + AY G ++ +Y+ A + KAI ++ N+ A+ +
Sbjct: 738 LALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNL 797
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y DL + AL + + I+ ++ AY+ RG+L L ++ A+ D +
Sbjct: 798 YSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYT 846
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 23 IDELVRVDSVMASAITARIELAKLCS------------------LRNWSKAIRILDSLLA 64
+D+L R D +A AIT I+LA + L +W+KAI L+ A
Sbjct: 663 LDKLKRYDEGLA-AITQAIDLAPRAAWYSNRGNLYIDLQKYELALSDWNKAIE-LNPNFA 720
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
+Y NR Y L+ ++ + D KA+ ++P +AY+ +G + L + E ALS
Sbjct: 721 DAYN-----NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALS 775
Query: 125 VWEK 128
+ K
Sbjct: 776 DYTK 779
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L ++SKAI I + A +Y NR YS L+ + + D KA+ ++P +AY
Sbjct: 806 LALSDYSKAIDI-NPNYAMAYN-----NRGVLYSDLQKYDLALSDYTKAIDINPNYAEAY 859
Query: 107 ILKGCAFSALGRKEEALSVWEKG------YEHALHQSADLKQFLELEEL 149
+ +G +S L + + ALS + K Y A +L + L+ EL
Sbjct: 860 VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYEL 908
>gi|428320482|ref|YP_007118364.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244162|gb|AFZ09948.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1011
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 240/547 (43%), Gaps = 67/547 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR--IELA---KLCSLRNWSKAIRILDSLLAQSY 67
+ + + + ++ + +D +++A R ++ A K +L ++++AI L+ + +Y
Sbjct: 496 IGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIH-LEPKFSAAY 554
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR S L I D ++A++L+P L AY+ +G A S LG K EA+S
Sbjct: 555 -----VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAIS--- 606
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMS- 186
D Q L+L+ L A +R + +Y++ +++ ++ + K++
Sbjct: 607 -----------DYNQALDLDPKLAVAYANRG-SAKYELGQKAEAISDYNQAIDLDPKLAI 654
Query: 187 -ETSENHNKSDICDSSSQSRDVSETCSKSSHDPD--LCNGRSDEAKGGSSVPVSKSGLHI 243
+ K D+ + D ++ + + D G ++ A G + P++ I
Sbjct: 655 AYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAI 714
Query: 244 NGKLREVSENHNGSSDG----SKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
E++ N+ SD S + A A EI + D+ + S N + R
Sbjct: 715 -----ELNPNY---SDAYYTRSVANSALETAEEILVDYTQALDL-----NYNSANA-YFR 760
Query: 300 QTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETS 359
+ + DV K + ++ D N E K +++ N + K+++ +
Sbjct: 761 RGSSKSDVEKK----AEAIADYNQAIELNPKDAVAYNNRGLA---------KYNLGENEE 807
Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
A N+ + S D +RG+A+ G+ AI+ ++Q L + Y +A +
Sbjct: 808 ALADYNQAIHLN------SCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYL 861
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A++ + AI+D+ +AI +P A+ RG ++ALGE EAI D +KA+E
Sbjct: 862 NRGLAKSALGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELN 921
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+ + RG+ + + AA+ D S ++L N AY GLA S +G+ +A
Sbjct: 922 YYNPHPYYNRGLTKYNLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAIAD 981
Query: 540 HLKAIQL 546
+ KA L
Sbjct: 982 YQKAADL 988
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 121/224 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G+ A AIS ++Q + DP A + RG + E E AISD+ +AI+ N
Sbjct: 624 NRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELN 683
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG A +ALG++ + + D ++A+E PN +D + R + N + + D
Sbjct: 684 PNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVD 743
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + +AY G + S + + +A + +AI+L+ A+ + +L
Sbjct: 744 YTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLG 803
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+E+AL Q ++++ ++ AY+ RGL LGQ ++AI D +
Sbjct: 804 ENEEALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYN 847
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A+ EGK AI+ ++Q + +P Y +A RG A+ + E AI+D+ +AI N
Sbjct: 318 TQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLN 377
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A++ LG EA+ D ++A+E + N AD + RG V ++ A D
Sbjct: 378 PKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARAD 437
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
L+ K A+ Y G+ S + E +A A A+ L+ A+ +
Sbjct: 438 FVKANDLNP--KLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGE 495
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ N E+AL Q +++D + S AY RG++ LG +A+ D +
Sbjct: 496 IGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYN 541
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 6/228 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A+ G A AIS ++Q L DP A RG+A+ + AISD+ +AI
Sbjct: 589 VNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYELGQKAEAISDYNQAIDL 648
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + LGE EAI D ++A+E PN AD + RG+ N +
Sbjct: 649 DPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLA 708
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFY 561
D + ++L+ AY +A S++ + AEE + +A+ L+ N A+
Sbjct: 709 DRTQAIELNPNYSDAYYTRSVANSAL---ETAEEILVDYTQALDLNYNSANAYFRRGSSK 765
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D+ +A+ Q + ++ + + AY+ RGL + LG++++A+ D +
Sbjct: 766 SDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYN 813
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 127/239 (53%), Gaps = 5/239 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I +D +L+ RG + + G+ AIS ++Q ++ +P Y +A RG A + +
Sbjct: 643 NQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGK 702
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E ++D T+AI+ NP+ +A+ R A +AL + E + D ++AL+ NSA+ RG
Sbjct: 703 TEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVDYTQALDLNYNSANAYFRRG 762
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A+ D + ++L+ ++ AY GLA ++GE ++A + +AI L+ +
Sbjct: 763 SSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYNQAIHLNSCY 822
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + L +E+A+ Q L ++ ++ AY RGL LGQ +AI D +
Sbjct: 823 ADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQKAEAIADYN 881
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + + G+ A AIS ++Q ++ +P A + RG A++ AISD+ +A+
Sbjct: 555 VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDL 614
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A+ LG+ EAI D ++A++ +P A ERG V + + A+
Sbjct: 615 DPKLAVAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAIS 674
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ AY GLA S++G+ + +AI+L+ N+ +A+ + + +
Sbjct: 675 DYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAY-----YTRSV 729
Query: 565 ANSEKALECLQQVL 578
ANS ALE +++L
Sbjct: 730 ANS--ALETAEEIL 741
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 117/225 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R + + GK A+S + + + D A +GRG ++ E AI+D+T+AI+
Sbjct: 181 VGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEAIADYTKAIEL 240
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+K RG A+ +LG EA+ D ++A++ +PN AD + RG V ++ + A
Sbjct: 241 NPKDVGAYKNRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEARA 300
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D L+ + AY GLA G+ ++A + +AI L+ N+ +A+ + +L
Sbjct: 301 DFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNL 360
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ Q + ++ + + Y+ RGL LG+ ++A+ D +
Sbjct: 361 EKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYN 405
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + + GK A+S ++Q + DP A +GR + + E A+SD+T+AI
Sbjct: 147 LNRGLTKSSLGKKEEALSDYNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAIDL 206
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ A+ RG ++ L E EAI D +KA+E P RG+ F A+
Sbjct: 207 DSKLDVAYVGRGLVKSELEEKAEAIADYTKAIELNPKDVGAYKNRGLAKFSLGRIEEALA 266
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD + AY G +GE ++A +KA L+ A+ + Q L
Sbjct: 267 DYNQAIDLDPNDADAYNNRGKVKYELGEKEEARADFVKANNLNPKLAVAY-----YTQGL 321
Query: 565 ANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A E+A+ Q + ++ ++ AYH RGL + L + ++AI D +
Sbjct: 322 AKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYN 371
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 4/250 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG+A GK ++ Q ++ +P Y +A R A + E + D+T+
Sbjct: 687 ADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVDYTQ 746
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ N ++ A+ RRG +++ + + EAI D ++A+E P A + RG+ + +
Sbjct: 747 ALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENE 806
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + + L+ AY GLA S +G+ ++A + +A+ L+ + +A+ +
Sbjct: 807 EALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLA 866
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR--TMMPH 618
L +A+ Q + ID + + AY+ RG LG+ +AI D + PH
Sbjct: 867 KSALGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPH 926
Query: 619 LIWN--LTRW 626
+N LT++
Sbjct: 927 PYYNRGLTKY 936
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 120/221 (54%), Gaps = 2/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ GK A+S ++Q ++ +P A + RG ++ + E A+SD+ +AI +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQAIDLD 173
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVE 504
P A+ R + LG+ EA+ D +KA++ + + D+ + RG+V + ++ A+
Sbjct: 174 PKRAAAYVGRALVKHELGKKEEALSDYTKAIDLD-SKLDVAYVGRGLVKSELEEKAEAIA 232
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ ++ AY GLA S+G ++A + +AI LD N +A+ + + +L
Sbjct: 233 DYTKAIELNPKDVGAYKNRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYEL 292
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A + ++ + + AY+ +GL + G+ ++AI
Sbjct: 293 GEKEEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAI 333
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 8/232 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + RG ++ + K A AI+ ++Q ++ +P A RG A+ E E A++D+
Sbjct: 754 SANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYN 813
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI N +A+ RG A++ LG++ EAI D ++AL+ AD RG+
Sbjct: 814 QAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQK 873
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--- 556
A+ D + + +D + AY G S++GE +A + KAI+L N+ +
Sbjct: 874 AEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIEL--NYYNPHPYYNR 931
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
LT++ +L E A+ +V+ + + AY+ RGL LGQ +AI D
Sbjct: 932 GLTKY--NLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAIAD 981
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G+ A++ ++Q + DP +A RG + E E A +DF +A N
Sbjct: 250 NRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEARADFVKANNLN 309
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ +G A+ G+ EAI + ++A++ PN AD H RG+ + + A+ D
Sbjct: 310 PKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIAD 369
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + + Y GLA S +G ++A + +AI+LD N +A+ + +L
Sbjct: 370 YNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELG 429
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL 593
++A + ++ + + Y RG+
Sbjct: 430 AKQEARADFVKANDLNPKLAFVYFKRGV 457
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + G A++ ++Q + DP A + RG ++ A++D+ +AI
Sbjct: 487 LLRGNIKGEIGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHL 546
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG ++ LG+ EAI D ++A+E P A RG + A+
Sbjct: 547 EPKFSAAYVNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAIS 606
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD + AY G A +G+ +A + +AI LD A+ DL
Sbjct: 607 DYNQALDLDPKLAVAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDL 666
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+ Q + ++ ++ AY+ RGL LG+ + + D
Sbjct: 667 GEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLAD 709
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P + +A RG A+ ++E A+SD+ +AI+ NP A+ RG +++LG+ EA+ D
Sbjct: 106 PTFADAYNNRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSD 165
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A++ +P A R +V + A+ D + + LD + AY GL S +
Sbjct: 166 YNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELE 225
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
E +A + KAI+L+ + A+ + L +F L E+AL Q + +D + AY+
Sbjct: 226 EKAEAIADYTKAIELNPKDVGAYKNRGLAKF--SLGRIEEALADYNQAIDLDPNDADAYN 283
Query: 590 LRGLLLHGLGQHKKAIKDLSSGS----RTMMPHLIWNLTRWR 627
RG + + LG+ ++A D + + + + L ++R
Sbjct: 284 NRGKVKYELGEKEEARADFVKANNLNPKLAVAYYTQGLAKYR 325
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N K AI+ ++Q + +P RG A++ +E A++D+ +AI+ +
Sbjct: 352 NRGLAKYNLEKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIELD 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG + LG EA D KA + P A + +RG+ + + A+
Sbjct: 412 ANDADAYNNRGNVKYELGAKQEARADFVKANDLNPKLAFVYFKRGVGKSELAEKAEALAA 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V L+ + AY G IG ++A + +AI LD A+ + L
Sbjct: 472 FSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALG 531
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +AL Q ++++ +FS AY RG++ LGQ +AI D +
Sbjct: 532 HKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDYN 575
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ + + A A++ F + +P A + RG + E A++D+ +AI
Sbjct: 453 FKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHL 512
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG ++ALG EA+ D ++A+ EP + RG+V A+
Sbjct: 513 DPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAIS 572
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ + AY G A S +G +A + +A+ LD A+ + +L
Sbjct: 573 DYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYEL 632
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ Q + +D + + AY RG + + LG+ ++AI D +
Sbjct: 633 GQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYN 677
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG++++ + AI+D+ +AI+ NP A+ RG A+ LGE+ EA+ D ++A+
Sbjct: 757 AYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYNQAI 816
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
AD + RG+ A+ D + + L+ AY GLA S++G+ +A
Sbjct: 817 HLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQKAEA 876
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ +AI +D A+ + L +A+ + + ++ Y+ RGL +
Sbjct: 877 IADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPHPYYNRGLTKY 936
Query: 597 GLGQHKKAIKDLS 609
LG+ + AI D S
Sbjct: 937 NLGEQEAAIADYS 949
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G+ A++ ++Q ++ D +A RG + + A +DF +A N
Sbjct: 386 NRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARADFVKANDLN 445
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +RG ++ L E EA+ S A+ P A RG + + + A+ D
Sbjct: 446 PKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALAD 505
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD + +AY G+ S++G +A + +AI L+ F A+ + DL
Sbjct: 506 YNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLG 565
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ Q + ++ + + AY RG LG +AI D +
Sbjct: 566 QKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYN 609
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARI----ELAKLC-SLRNWSKAIRILDSLLAQSY 67
L K + + + ++ + +D A+A R EL K +L +++KAI LDS L +Y
Sbjct: 156 LGKKEEALSDYNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAID-LDSKLDVAY 214
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
R S+LE I D KA++L+P + AY +G A +LGR EEAL+ +
Sbjct: 215 -----VGRGLVKSELEEKAEAIADYTKAIELNPKDVGAYKNRGLAKFSLGRIEEALADYN 269
Query: 128 K 128
+
Sbjct: 270 Q 270
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 39 ARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQ 97
A+ +L K+ +L ++++AI L+ LA +Y NR S L + + D ++A+
Sbjct: 118 AKYKLGKIEEALSDYNQAIE-LNPKLASAY-----LNRGLTKSSLGKKEEALSDYNQAID 171
Query: 98 LDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
LDP AY+ + LG+KEEALS + K
Sbjct: 172 LDPKRAAAYVGRALVKHELGKKEEALSDYTK 202
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 25 ELVRVDSVMASAITARIELAKLC-------------SLRNWSKAIRILDSLLAQSYEIQD 71
E R D V A+ + ++ +A ++ N+++AI L+ A +Y
Sbjct: 296 EEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAID-LNPNYADAYH--- 351
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR LE + I D ++A+ L+P L Y +G A S LGR EEAL+ + + E
Sbjct: 352 --NRGLAKYNLEKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIE 409
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR +L + + D ++A++L+P L AY+ +G S+LG+KEEALS + +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQ 168
>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1694
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/561 (21%), Positives = 237/561 (42%), Gaps = 46/561 (8%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQSAD 139
LE ++ + +KAL++ P +A+ LKG A L R EEA++ +EK E H++
Sbjct: 375 LERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWF 434
Query: 140 LK-----QFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDKMSETS 189
LK EE + A ++ + ++ + N++ +L E + A +K E
Sbjct: 435 LKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIK 494
Query: 190 ENHN-----KSDICDSSSQSRDVSETCSKS------SHDPDLCNGRS--DEAKGGSSVPV 236
+ + K + + + + K+ HD G + + + +V
Sbjct: 495 PDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAA 554
Query: 237 SKSGLHINGKLREVSENHNGSSDGS-----KSTHASRDASEINRQSSDDFDICNGPIDKA 291
+ L I E G++ G+ ++ A A EI + + + +
Sbjct: 555 YEKALEIKPDFHEAW-FLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNL 613
Query: 292 SVNER----HGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK 347
E + + D HD +L N E Y ++ + K+ E +
Sbjct: 614 ERYEEAVAAYEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKA---LEIKPD 666
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIF 404
+ W + +R ++ V K+ I DF + +GIA +Y A++ F
Sbjct: 667 FHYAWFLKGNALGNLERYEE-AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAF 725
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
++ L+ P + EA +G A E A++ F +A++ P EAW +G A L
Sbjct: 726 EKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER 785
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ KALE +P+ + + +GI K + + AV +++ + A+ G
Sbjct: 786 YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKG 845
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
AL ++ Y++A A+ KA+++ +F EAW + ++L E+A+ ++ L I F
Sbjct: 846 NALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDF 905
Query: 585 SKAYHLRGLLLHGLGQHKKAI 605
+A++ +G+ L L ++++A+
Sbjct: 906 HEAWNNKGIALEKLERYEEAV 926
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF + +GIA N +Y A++ +++ L+ P + EA +G A
Sbjct: 857 AVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIAL 916
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ F +A++ P EAW +G A L EA+ KALE +P+
Sbjct: 917 EKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYA 976
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GI K + + AV +++ + A+ G+AL + Y++A A+ KA++
Sbjct: 977 WFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALE 1036
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F EAW + ++L E+A+ ++ L I F +A+H +G+ L L ++++A+
Sbjct: 1037 IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAV 1096
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 128/593 (21%), Positives = 235/593 (39%), Gaps = 75/593 (12%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLK 141
LE ++ + +KAL++ P +A+ LKG A L R EEA++ YE AL D
Sbjct: 579 LERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVA----AYEKALEIKPDFH 634
Query: 142 Q--FLE---------LEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDKM 185
FL+ EE + A ++ + ++ + N++ +L E + A +K
Sbjct: 635 DAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVAAFEKA 694
Query: 186 SETSEN-----HNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEA-------KGGS 232
E + +NK + + + K+ PD +++ +
Sbjct: 695 LEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEE 754
Query: 233 SVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF-DICNGPIDKA 291
+V + L I E N + + + + A E + DF + N
Sbjct: 755 AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 814
Query: 292 SVNERHGRQTNGTH-------DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
ER+ D HD +L N E Y ++ + K+ +
Sbjct: 815 EKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKALE---- 866
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFC----------VTRISKSKSISVDFRLS---RGIAQ 391
+K +EA NK V K+ I DF + +GIA
Sbjct: 867 ----------IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIAL 916
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+Y A++ F++ L+ P + EA +G A E A++ + +A++ P A
Sbjct: 917 EKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYA 976
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G A L EA+ KALE +P+ + +GI K + + AV ++
Sbjct: 977 WFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALE 1036
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A+ G+AL ++ Y++A A+ KA+++ +F EAW + ++L E+A+
Sbjct: 1037 IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAV 1096
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
++ L I + A+H +G L L ++++A+ + + P H WN
Sbjct: 1097 AAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEK-ALEIKPDYHYAWN 1148
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/557 (20%), Positives = 225/557 (40%), Gaps = 72/557 (12%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQSAD 139
LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK E H++ +
Sbjct: 851 LERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWN 910
Query: 140 -----LKQFLELEELLTAAKQDRSVTCEY-----DVSNSMSSLTVSESGLNANDKMSETS 189
L++ EE + A ++ + ++ + N++ +L E + A +K E
Sbjct: 911 NKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIK 970
Query: 190 ENHN-----------KSDICDSSSQSRDVSETCSKSSHDPDLCNG-------RSDEAKGG 231
+ + K + + + + + + H+ G R +EA
Sbjct: 971 PDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEA--- 1027
Query: 232 SSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKA 291
V + L I E N + + + + A E + DF
Sbjct: 1028 --VAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDF---------- 1075
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFK 351
H+ + +L N E Y ++ + K+ E + +
Sbjct: 1076 ----------------HEAWHNKGIALE----NLERYEEAVAAYEKA---LEIKPDYHYA 1112
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W + +R ++ V K+ I D+ + +GIA + +Y A++ F++ L
Sbjct: 1113 WHNKGDALENLERYEE-AVAAYEKALEIKPDYHYAWNGKGIALIKLERYEEAVAAFEKAL 1171
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ P + +A +G A E A++ F +A++ P EAW +G A L EA
Sbjct: 1172 EIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEA 1231
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ KALE +P+ + H +G K + + AV +++ + A+ G AL
Sbjct: 1232 VAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALI 1291
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ Y++A A+ KA+++ +F EAW L E+A+ ++ L I F +A+
Sbjct: 1292 KLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAW 1351
Query: 589 HLRGLLLHGLGQHKKAI 605
L+G L L ++++A+
Sbjct: 1352 FLKGNALIKLERYEEAV 1368
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 119/567 (20%), Positives = 228/567 (40%), Gaps = 44/567 (7%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--- 131
+ +LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK E
Sbjct: 1014 KGIALGKLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKP 1073
Query: 132 ---HALHQSADLKQFLE-LEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNAN 182
A H + LE EE + A ++ + +Y + +++ +L E + A
Sbjct: 1074 DFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAY 1133
Query: 183 DKMSETSENHN-----------KSDICDSSSQSRDVSETCSKSSHDPDLCNGRS--DEAK 229
+K E +++ K + + + + + + HD G + + +
Sbjct: 1134 EKALEIKPDYHYAWNGKGIALIKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLER 1193
Query: 230 GGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPID 289
+V + L I E N + + + + A E + DF
Sbjct: 1194 YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKG 1253
Query: 290 KASVN-ERHGRQTNGTH-------DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDS 341
A + ER+ D HD +L E Y ++ + K+
Sbjct: 1254 NALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNAL----IKLERYEEAVAAYEKA--- 1306
Query: 342 TESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYA 398
E + W + + +R ++ V K+ I DF +G A + +Y
Sbjct: 1307 LEIKPDFHEAWFLKGNALIKLERYEE-AVAAYEKALEIKPDFHEAWFLKGNALIKLERYE 1365
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A++ +++ L+ P + EA +G A E A++ + +A++ P EAW +G A
Sbjct: 1366 EAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIA 1425
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ KALE +P+ + H +G K + + AV +++ +
Sbjct: 1426 LGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHE 1485
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A+ G AL + Y++A A+ KA+++ +F EAW L E+A+ ++ L
Sbjct: 1486 AWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKAL 1545
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAI 605
I F +A+ L+G L L ++++A+
Sbjct: 1546 EIKPDFHEAWFLKGNALIKLERYEEAV 1572
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/535 (20%), Positives = 216/535 (40%), Gaps = 48/535 (8%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
+ +LE ++ + +KAL++ P +A+ LKG A L R EEA++ +EK
Sbjct: 980 KGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKA----- 1034
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
LE++ A ++ + E ++ ++ E L E HNK
Sbjct: 1035 ---------LEIKPDFHEAWHNKGIALE-NLERYEEAVAAYEKALEIKPDFHEAW--HNK 1082
Query: 195 SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
++ + + K+ PD ++ ++ + + K E+ +
Sbjct: 1083 GIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPD 1142
Query: 254 HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
++ + +G I + ++ +KA D HD
Sbjct: 1143 YHYAWNGKG----------IALIKLERYEEAVAAFEKA---------LEIKPDFHDAWFL 1183
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
+L N E Y ++ + K+ E + W+ K + E + V
Sbjct: 1184 KGNALG----NLERYEEAVAAFEKA---LEIKPDFHEAWNN-KGIALEKLERYEEAVAAF 1235
Query: 374 SKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
K+ I DF + +G A + +Y A++ +++ L+ P + +A +G A
Sbjct: 1236 EKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLER 1295
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A++ + +A++ P EAW +G A L EA+ KALE +P+ + +G
Sbjct: 1296 YEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKG 1355
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + + AV +++ + A+ G AL ++ Y++A A+ KA+++ +F
Sbjct: 1356 NALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDF 1415
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + L E+A+ ++ L I F +A+H +G L L ++++A+
Sbjct: 1416 HEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAV 1470
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 17/247 (6%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF +GIA +N +Y A++ +++ L+ P + EA +G A
Sbjct: 279 AVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIAL 338
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ + +A++ P EAW +G A L EA+ KALE +P+ +
Sbjct: 339 INLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEA 398
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GI + + AV +++ + A+ G AL ++ Y++A A+ KA++
Sbjct: 399 WFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALE 458
Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +F EAW G+L ++ + +A EKALE I F A+ L+G L L
Sbjct: 459 IKPDFHEAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHDAWFLKGNALGNL 511
Query: 599 GQHKKAI 605
++++A+
Sbjct: 512 ERYEEAV 518
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 17/247 (6%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF +GIA +N +Y A++ +++ L+ P + EA +G A
Sbjct: 313 AVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHEAWFLKGNAL 372
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ + +A++ P EAW +G A L EA+ KALE +P+ +
Sbjct: 373 GNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEA 432
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G + + AV +++ + A+ G AL ++ Y++A A+ KA++
Sbjct: 433 WFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALE 492
Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +F +AW G+L ++ + +A EKALE I F A+ L+G L L
Sbjct: 493 IKPDFHDAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHDAWFLKGNALGNL 545
Query: 599 GQHKKAI 605
++++A+
Sbjct: 546 ERYEEAV 552
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +N +Y A++ +++ L+ P + EA +G A E A++ + +A++
Sbjct: 265 NKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIK 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A L EA+ KALE +P+ + +G + + AV
Sbjct: 325 PDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAA 384
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+AL ++ Y++A A+ KA+++ +F EAW G+L
Sbjct: 385 YEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLE 444
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A EKALE I F +A+ L+G L L ++++A+
Sbjct: 445 RYEEAVAAYEKALE-------IKPDFHEAWFLKGNALGNLERYEEAV 484
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 17/247 (6%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF +G A N +Y A++ +++ L+ P + EA +G A
Sbjct: 347 AVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIAL 406
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ + +A++ P EAW +G A L EA+ KALE +P+ +
Sbjct: 407 GNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEA 466
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G + + AV +++ + A+ G AL ++ Y++A A+ KA++
Sbjct: 467 WFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALE 526
Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +F +AW G+L ++ + +A EKALE I F +A+ L+G L L
Sbjct: 527 IKPDFHDAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHEAWFLKGNALGNL 579
Query: 599 GQHKKAI 605
++++A+
Sbjct: 580 ERYEEAV 586
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI D+ LK +P A +G+A E A++ + +A++ P EAW +G A
Sbjct: 244 EAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIA 303
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ KALE +P+ + +GI + + AV +++ +
Sbjct: 304 LINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHE 363
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKAL 571
A+ G AL ++ Y++A A+ KA+++ +F EAW G+L ++ + +A EKAL
Sbjct: 364 AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKAL 423
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E I F +A+ L+G L L ++++A+
Sbjct: 424 E-------IKPDFHEAWFLKGNALGNLERYEEAV 450
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI EA++ P+ AW +G A L EA+ KALE +P+ + +GI
Sbjct: 243 EEAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGI 302
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + AV +++ + A+ G+AL ++ Y++A A+ KA+++ +F
Sbjct: 303 ALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFH 362
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
EAW G+L ++ + +A EKALE I F +A+ L+G+ L L ++++A
Sbjct: 363 EAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHEAWFLKGIALGNLERYEEA 415
Query: 605 I 605
+
Sbjct: 416 V 416
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF + +GIA +Y A++ F++ L+ P + EA +G A
Sbjct: 1401 AVAAYEKALEIKPDFHEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNAL 1460
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ + +A++ P EAW +G A L EA+ KALE +P+ +
Sbjct: 1461 IKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEA 1520
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G K + + AV +++ + A+ G AL + Y++A A+ KA++
Sbjct: 1521 WFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALE 1580
Query: 546 L 546
+
Sbjct: 1581 I 1581
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
N+ LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK
Sbjct: 1047 NKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIK 1106
Query: 130 --YEHALHQSADLKQFLE-LEELLTAAKQDRSVTCEY 163
Y +A H D + LE EE + A ++ + +Y
Sbjct: 1107 PDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDY 1143
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ +LE ++ + +KAL++ P A+ LKG A L R EEA++ +EK E
Sbjct: 809 NKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALE 866
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD + G A G Y A+ +D + P P RG LE A+ F E
Sbjct: 501 VDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDE 560
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ +PS W+ +G A ALG S EAI +ALE P+ + + RG+V F +
Sbjct: 561 VIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYG 620
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E ++LD+ K G AL S+G Y +A E + K +++ +AW
Sbjct: 621 EAIESYDRVIELDRYEK------GEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLA 674
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+Q L + E++ EC +V+ ID + + RG +L LG + A+
Sbjct: 675 HQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGAL 719
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S D +RG+A + G+Y A+ +D+ + DP + +G A
Sbjct: 115 CYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFDPAQGDLWYQKGLALCGL 174
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI + AI + +W + A +LG + EAI +A++ +P+ D+ +
Sbjct: 175 GRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYN 234
Query: 489 RGIVNF-------KFKDFNAA-----------------------VEDLSAC----VKLDK 514
+GI + FK ++AA VE+ C + +D
Sbjct: 235 KGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDP 294
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G AL ++G + +A+E + +A+++D + W +L Q L E+ALE
Sbjct: 295 SLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAY 354
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++ ID S+A++ RGL L+ LG++ +A
Sbjct: 355 DRLIEIDPNLSEAWYNRGLALYSLGRYDEA 384
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + I + Y A+ ++ L DP YP+A +G + L+ A+S F +++
Sbjct: 29 LGKAIGFYSNESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEI 88
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P W +G LG EAI +A+EF D+ RG+ + + AV
Sbjct: 89 DPQDPHIWYSKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVR 148
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
+ D + GLAL +G Y+KA E++ AI +D + +W G Y
Sbjct: 149 SYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYS- 207
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L +E+A++C + + ID + ++ +G+ L+ LG+H++A K
Sbjct: 208 LGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFK 250
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 365 NKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
N+ + + + +KS+ +D +G + G+ A+S F++ L+ DP P
Sbjct: 38 NESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEIDPQDPHIWY 97
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+G + AI + A++ N + + W+ RG A +LG EA++ +A+ F+
Sbjct: 98 SKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFD 157
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P D+ +++G+ + A+E + +D ++ +++ LAL S+G ++A +
Sbjct: 158 PAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDC 217
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI +D + + W + L E+A +C + ID + A+ +GL + LG
Sbjct: 218 YDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLG 277
Query: 600 QHKKAIKDLSSGSRTMMPHL--IWN 622
+ ++AI D + + P L +WN
Sbjct: 278 RVEEAI-DCYDRAIDIDPSLVAVWN 301
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R D ++GIA G++ A +D ++ DP+Y A +G A
Sbjct: 217 CYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSL 276
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E AI + AI +PS W +G A ALG EA + +A+E +P ++ +
Sbjct: 277 GRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYN 336
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+V + A+E +++D A+ GLAL S+G Y +A + + +++D
Sbjct: 337 LGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDP 396
Query: 549 NFLEAW-------GHLTQFYQDLANSEKALE---------------------------CL 574
+ W G L ++ + L ++ALE C
Sbjct: 397 ENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCY 456
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
V+ ID + A++ RG+ L+ LG++++A
Sbjct: 457 GDVIGIDPGYENAWYNRGVALYTLGRYEEA 486
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ +A + G+ AI +D+ + DP + +G A E A + A++ +
Sbjct: 200 GKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEID 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A +LG EAI +A++ +P+ + + +G + F+ A E
Sbjct: 260 PLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQEC 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V++D E + + LG+ L +G ++A EA+ + I++D N EAW + L
Sbjct: 320 YRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLG 379
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A C +VL ID ++ + L L LG++++A+
Sbjct: 380 RYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEAL 419
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 44/287 (15%)
Query: 363 KRNKKFCVTRISKS-----KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDP 412
K N + + R ++ +++ +D S G+ G+ A+ +D++++ DP
Sbjct: 303 KGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDP 362
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG A + A + ++ +P G+ W + A +LG EA+
Sbjct: 363 NLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCY 422
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ALE P ++L+ R + + + +N +V + +D ++A+ G+AL ++G
Sbjct: 423 DEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGR 482
Query: 533 YKKAEEAHLKAIQLDRNFLEAW---------------------GHLTQFYQD-------- 563
Y++A ++ +A L+ + ++AW G + + D
Sbjct: 483 YEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRG 542
Query: 564 --LANS---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L N+ E+A+E +V+ ID + + L+GL L+ LG+ +AI
Sbjct: 543 LLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAI 589
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y ++ + ++ DP Y A RG A E A + + EA N S +AW
Sbjct: 448 RYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVGM 507
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A AA G A++ A+ P + + RG++ + AVE +++D
Sbjct: 508 GDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPS 567
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + GLAL ++G +A + + +A+++ + + W + L +A+E
Sbjct: 568 YEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESYD 627
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+V+ +D+ + +G L+ LG++ +AI+
Sbjct: 628 RVIELDR------YEKGEALYSLGRYDEAIE 652
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + + L RG + G Y A++ +D L+EDP EA GRG A
Sbjct: 687 CYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLEAARGRGEALLAL 746
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A + F + + G AW RG A A L EAI +A+ + +
Sbjct: 747 GRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAIAINSSDNLLWIG 806
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG V + AV + LD+E+ A++ G AL G + A + +AI LD
Sbjct: 807 RGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIALDP 866
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
+ EA ++ +E+A+ C + + +D
Sbjct: 867 SSGEAQRGRGSVFEAQGRAEEAIGCYEAAIALDP 900
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 99/238 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + + D + +A + G+Y A+ +D+ L+ P PE L R
Sbjct: 387 CYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSL 446
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + + I +P AW RG A LG EA +A + D
Sbjct: 447 ERYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVG 506
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G ++ AVE + L + + + GL L + ++A E+ + I++D
Sbjct: 507 MGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDP 566
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ W L S++A++C + L I ++ RG++L LG++ +AI+
Sbjct: 567 SYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIE 624
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + + +G+A G Y + +D++++ DP Y E ++ RG
Sbjct: 653 CYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRL 712
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A++ + A+Q +P EA + RG+A ALG EA + L H
Sbjct: 713 GDYDGALASYDLALQEDPDDLEAARGRGEALLALGRFEEASATFDRILANASEDGGAWHG 772
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ ++ A++ + ++ + + G L G + A + +AI LD+
Sbjct: 773 RGLALAGLLRYDEAIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQ 832
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + E A + + +D +A RG + G+ ++AI
Sbjct: 833 EDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQRGRGSVFEAQGRAEEAI 889
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
S + I +D R +G A + G+Y AI ++++L+ P+ +A +G A + E
Sbjct: 625 SYDRVIELD-RYEKGEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYER 683
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ + ++ +P E RRG LG+ A+ AL+ +P+ + RG
Sbjct: 684 SAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLEAARGRGEAL 743
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A + E+ A+ GLAL+ + Y +A +++ +AI ++ +
Sbjct: 744 LALGRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAIAINSSDNLL 803
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
W ++ E A+ + + +D+ +A+ +RG L G+ + A
Sbjct: 804 WIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDA 854
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + K I D + +D A++ + L SL +AI D + + D+
Sbjct: 174 LGRYEKAIESYDFAITIDGDDAASWHGKA--LALYSLGRAEEAIDCYDRAIDIDPSLTDV 231
Query: 73 C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ L H+ + D A+++DP A+ KG AF +LGR EEA+ +++ +
Sbjct: 232 WYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAID 291
Query: 132 -------------HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTV---- 174
+AL+ L +F E +E R+V + + SN +L V
Sbjct: 292 IDPSLVAVWNNKGNALYA---LGRFDEAQECYR-----RAVEIDPEYSNPWYNLGVVLQR 343
Query: 175 ---SESGLNANDKMSETSENHNKS 195
E L A D++ E N +++
Sbjct: 344 LGRGEEALEAYDRLIEIDPNLSEA 367
>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
Length = 605
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ I + RGI E K Y AI+ F+ ++ +P Y +A R AR + AA
Sbjct: 31 NRRIDAETYCKRGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAA 90
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADIL 486
I+D+ +A+Q NP+ E + RG A A G+ +AI + +EF+P + A+
Sbjct: 91 IADYDQALQINPTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAY 150
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ N ++ A+ DL ++ +AY+ G +GEY++A H +A+QL
Sbjct: 151 YYRGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQL 210
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N EA+ + + L +KA+ + L I+ AY+ RGL+ L ++++A
Sbjct: 211 DPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFA 270
Query: 607 DLS 609
D +
Sbjct: 271 DFN 273
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 113/214 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI+ ++Q L+ +P EA GR A R+ AI+D+T++I+ +P A+
Sbjct: 365 GDYRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCN 424
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG++ A+ D ++AL P ++ + RG +++ +++ +A+ D + ++L
Sbjct: 425 RGNARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQP 484
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ Y+ A ++ +Y+ A + ++I ++ + E W + + + L E+AL L
Sbjct: 485 ESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADL 544
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q L ++ AY LR +L G ++ AI D
Sbjct: 545 NQALKFHPHWASAYLLRADILRNRGDYQAAIADF 578
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++G Y AI Q L+ P + A RG E AI+D A+Q +P
Sbjct: 153 RGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ RG A ALG +AI D ++ LE P+ + RG+++F ++ A D
Sbjct: 213 NLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFADF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + + AY GL + +Y+ A + +++QL+ +G Y+ L +
Sbjct: 273 NQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL ++L + F+ Y R LG ++ AI D +
Sbjct: 333 YPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYN 375
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y AI+ ++ ++ DP EA RG A + AI+D+ ++ NP
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG L E +A D ++ L F PN A ++RG++ ++D+ +A+ D
Sbjct: 247 HQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADY 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ E Y +G+Y A + ++L NF + + L +
Sbjct: 307 NQSLQLNSELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGD 366
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
A+ Q L I+ ++AY+ R + L AI D + R
Sbjct: 367 YRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIR 413
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ +++ L+ +P A RG + E + A +DF + + N
Sbjct: 220 NRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFADFNQVLNFN 279
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ +RG A + A+ D +++L+ A + R + D+ +A+ D
Sbjct: 280 PNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGDYPSALAD 339
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + Y + +G+Y+ A + +A+Q++ N EA+ ++ L
Sbjct: 340 GNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNIAEAYYGRAIAHEALR 399
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ A+ Q + I F+ AY RG LG K A+ D + + T+ P L
Sbjct: 400 DFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQ-ALTINPQL 452
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 108/224 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A + F+Q+L +P +A RG ++ ++A++D+ +++Q N
Sbjct: 254 NRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLN 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R LG+ A+ D ++ LE +PN A +R D+ A+ D
Sbjct: 314 SELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIAD 373
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A ++ ++ A + ++I++ +F A+ + + L
Sbjct: 374 YNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLG 433
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+++ A+ Q L I+ + S+AY+ RG L + ++ AI D +
Sbjct: 434 DTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYT 477
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ ++EA R+ + ++S IS DF +RG A+ G A++ ++Q L +P
Sbjct: 391 RAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTINP 450
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG+ Q+ +AI+D+T+A++ P + + R AR AL + A+ D
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++++ P A+ + RG + A+ DL+ +K SAY L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILRNRGD 570
Query: 533 YKKA 536
Y+ A
Sbjct: 571 YQAA 574
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 367 KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K VT +++ +I+ +RG ++ Y SAI+ + Q L+ P R
Sbjct: 436 KGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAH 495
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-- 481
AR ++ + A++D+T++I NP E W RG++ LG EA+ DL++AL+F P+
Sbjct: 496 ARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWA 555
Query: 482 -----SADILHERGIVNFKFKDFNAAVEDLSACVKL 512
ADIL RG D+ AA+ D L
Sbjct: 556 SAYLLRADILRNRG-------DYQAAIADFQKSADL 584
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL------AQ 65
+ I + D ++AS I I A N+ +AI L L A
Sbjct: 123 QAIANYISTIEFDPLLASNINEDIANAYYYRGLNNNDQGNYQEAIIDLQQALQWHPYFAA 182
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y I R Y +L ++ I D ++A+QLDP L +AY +G A ALG ++A++
Sbjct: 183 AYSI-----RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIAD 237
Query: 126 WEKGYEHALHQ 136
+ + E HQ
Sbjct: 238 YNRTLEINPHQ 248
>gi|443646836|ref|ZP_21129514.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335665|gb|ELS50129.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 260
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEAAARLAL 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806]
Length = 268
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 38 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 97
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 98 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 157
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 158 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 213
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 214 AEAYHNRGLTYYKLGNREKAIADLEAAARLAL 245
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 76 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 135
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 136 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 195
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 196 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 233
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 28 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 87
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 88 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 147
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 148 IYRGNAKDDLGRHLEAIEDYT 168
>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
Length = 1148
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 117/224 (52%), Gaps = 5/224 (2%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA---FQRELEAAISDFTEAIQSN 445
I +N Y I +LK++P A RG A A FQ ++AI+D ++AIQ
Sbjct: 443 IVLLNTKNYDGCIEQLTSLLKDNPNIIGAYHVRGAAYAKKGFQ-SADSAIADLSKAIQLQ 501
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A E W+RR + +LG + EA+ DL+ A+ P++ H RG V+FK +++ AA ED
Sbjct: 502 PNAPEGWERRAEIYMSLGRTNEALADLTTAITLVPSAKAYAH-RGTVHFKEENYLAAEED 560
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + GLAL G+ K + E ++L+ ++ L Y++L
Sbjct: 561 FQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELG 620
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E +++ L + + ++ LRG LL+ G+ +A+KD +
Sbjct: 621 DFETSMQHFNTALSLQEDHVQSLQLRGSLLYQSGRPLEALKDFN 664
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
+NEA + +T + +K+ + RG E Y +A F + L+ D E +
Sbjct: 521 TNEALADLTTAITLVPSAKAYA-----HRGTVHFKEENYLAAEEDFQKSLELDSKQSEIM 575
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG A Q +++ +I F ++ P + + G A LG+ ++Q + AL
Sbjct: 576 HFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELGDFETSMQHFNTALSL 635
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ + L RG + ++ A++D + C+ +D N++ GL+ +SIG+Y +A +
Sbjct: 636 QEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSVDSTNEACEYMRGLSHASIGQYYEAVK 695
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ K +Q + FL +K +VLYI + +S+ H R
Sbjct: 696 SNAK-VQSNPPFL---------------GQKTSNEFARVLYI-REYSRYLHAR 731
>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 386
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ LS G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G L EA++ +AL+ +P + +G + A
Sbjct: 78 KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++++N A+ G L S+G+Y++A E + KA+Q++ F+EAW + +
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALILE 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++ALEC ++ L ID ++ +G LL +G+ +KAI
Sbjct: 198 ELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAI 240
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 120/237 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ +Y A+ +++ L+ DP +G
Sbjct: 72 CYEKILKNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTI 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AI + +A++ N +AW +G +LG+ EA++ KAL+ + +
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ ++ + K ++ A+E +++D E+ + G L +IG+ +KA E + KA+++++
Sbjct: 192 KALILEELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AW + ++L ++ALEC ++ L I+ + + +G+LL LG++++A+
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEAL 308
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ +++ L+ + + EA + + + A+ + A+Q +P W
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALECYERALQIDPEDDGTWNN 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +G+ +AI+ KALE +A + +G+V + K ++ A+E ++++
Sbjct: 226 KGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+ L +G+Y++A E KA++++ F +AW +DL E+AL+C
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWKWKGIILEDLKKPEEALKCH 345
Query: 575 QQVLYID 581
+Q L ++
Sbjct: 346 KQALKLN 352
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI +++ L+ + +A +G + E A+ + +A+Q N EAW
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L EA++ +AL+ +P + +G + A+E +++++
Sbjct: 192 KALILEELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G+ L + Y +A E + KA++++ E W + + L E+ALEC
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ L I+ F+ A+ +G++L L + ++A+K
Sbjct: 312 EKALEINPEFADAWKWKGIILEDLKKPEEALK 343
>gi|158341361|ref|YP_001522526.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158311602|gb|ABW33212.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
Length = 505
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q N+ K +AI ++ + ++ + Y A RG R + + AI+DF +AIQ NP
Sbjct: 262 QQNDNK--AAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSF 319
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A + LG+ AI D SKA++ P +A + RGI ++ D A+ D +
Sbjct: 320 AYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTI 379
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+L+ +N AY G ALS +G+ A + KAIQL+ ++ A+ + L++ A
Sbjct: 380 QLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGA 439
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + + ++ + AY+ R ++ LG K AI D++ ++
Sbjct: 440 ITDYDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAAQ 482
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G AI+ + + ++ +P+ A RG R + AI+DF + IQ N
Sbjct: 323 NRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLN 382
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + LG+ AI D KA++ P+ + RG F+ D N A+ D
Sbjct: 383 PDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGAITD 442
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++L+ ++ AY + S+G+ K A +A QL
Sbjct: 443 YDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAAQL 483
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W + E + + NK + +++ ++ D+ + RG+ + N AI+ F++ +
Sbjct: 253 WFLRAEKARQQNDNKA-AIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAI 311
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P A RG A + + E AI+D+++AIQ NP A+ RG R LG++ A
Sbjct: 312 QLNPDDSFAYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGA 371
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D K ++ P++A + RG + D N A+ D ++L+ + AY G
Sbjct: 372 IADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRF 431
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A + KAIQL+ + A+
Sbjct: 432 RLSDPNGAITDYDKAIQLNPDHAGAY 457
>gi|425457014|ref|ZP_18836720.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
gi|389801728|emb|CCI19133.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
Length = 260
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + SR +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEAASRLAL 237
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG ++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYGELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYDESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYT 160
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 115/223 (51%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ LS G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G L EA++ +AL+ +P + +G + A
Sbjct: 78 KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++++N A+ G L S+G+Y++A E + KA+Q++ F+EAW + ++
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIFE 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++ALEC + L ID + ++ +G LL +G+ +KAI
Sbjct: 198 ELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAI 240
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 110/212 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ +++ L+ + + EA + + + A+ + A+Q +P W
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDGTWNN 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +G+ +AI+ KALE +A + +G+V + K ++ A+E ++++
Sbjct: 226 KGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+ L +G+Y++A E KA++++ F +AW +DL E+AL+C
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCY 345
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ L ++ + ++++G L LG+H+KA K
Sbjct: 346 EKALKLNPQDKTLWYMQGKTLQKLGKHQKAKK 377
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 120/237 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ +Y A+ +++ L+ DP +G
Sbjct: 72 CYEKILKNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTI 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AI + +A++ N +AW +G +LG+ EA++ KAL+ + +
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ ++ + K ++ A+E +++D ++ + G L +IG+ +KA E + KA+++++
Sbjct: 192 KALIFEELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AW + ++L ++ALEC ++ L I+ + + +G+LL LG++++A+
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEAL 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI +++ L+ + +A +G + E A+ + +A+Q N EAW
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L EA++ +AL+ +P + +G + A+E +++++
Sbjct: 192 KALIFEELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G+ L + Y +A E + KA++++ E W + + L E+ALEC
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ L I+ F+ A+ +G++L L + ++A+K
Sbjct: 312 EKALEINPEFADAWEWKGIILEDLKKPEEALK 343
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI +++ L+ + +A +G + + A+ + +A++ N E W
Sbjct: 234 GKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWAN 293
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG+ EA++ KALE P AD +GI+ K A++ +KL+
Sbjct: 294 KGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNP 353
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++K+ + G L +G+++KA++++ KA+++D
Sbjct: 354 QDKTLWYMQGKTLQKLGKHQKAKKSYKKALKID 386
>gi|300870120|ref|YP_003784991.1| hypothetical protein BP951000_0487 [Brachyspira pilosicoli 95/1000]
gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
95/1000]
Length = 420
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 9/247 (3%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + K+ + D+ + RG+ + + G AI FD+ L DP +A +G
Sbjct: 149 KEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGL 208
Query: 424 AR---AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
F +E AI DF +AI+ NP+ A+ RG A+ LG EAI+D +KA++ P
Sbjct: 209 LEDELGFSKE---AIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNP 265
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG + A+ED +KL +N AY G A ++ Y++A + +
Sbjct: 266 NYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDY 325
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I+L+ N+ A+ + +L E+A+E + + ++ + AY+ RG LG
Sbjct: 326 DKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGL 385
Query: 601 HKKAIKD 607
+++A KD
Sbjct: 386 YEEAFKD 392
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F++ +K +P Y A RGTA+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ +P++ D + RG
Sbjct: 251 EEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGN 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A++D +KL+ AY G A ++G Y++A E KAI+L+ +++
Sbjct: 311 AKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYV 370
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
+A+ + ++L E+A + ++ L +D
Sbjct: 371 DAYNNRGFTKENLGLYEEAFKDYKKALELD 400
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N ++E+YS + ++ E +K +S K + +N NK+ + R++
Sbjct: 39 NNIDAENYSDFDDFNERAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++
Sbjct: 99 H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ A+ RG ++ LG EAI+D KAL +PN D + +G++ +
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +KL+ AY G A ++G Y++A + + KAI+L+ N+ A+ +
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+L E+A+E + + + + AY+ RG + L +++AIKD
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKD 324
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D +KA++ PN A + RG +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D + +KL+ AY G A ++G Y++A E KAI+L + +A+ +
Sbjct: 252 EAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNA 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+L E+A++ + + ++ ++ AY+ RG LG +++AI+D + + P +
Sbjct: 312 KYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIK-LNPDYV 370
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G Y AI FD+ +K P +A RG A+ E AI D+ + I+ N
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLN 332
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LG EAI+D KA++ P+ D + RG + A +D
Sbjct: 333 PNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKD 392
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 393 YKKALELDPSNECA 406
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K + D +RG A+ N Y AI +D+ +K +P Y A RG A+ E A
Sbjct: 296 KLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEA 355
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
I DF +AI+ NP +A+ RG + LG EA +D KALE +P
Sbjct: 356 IEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKDYKKALELDP 401
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
A+AF EL +SD FT + +N + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I A T LGL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAI---------------------------AKTKLGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AY+ +GLL LG K+AIKD +
Sbjct: 202 AYNNKGLLEDELGFSKEAIKDFN 224
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I+D +KA++L+P AY
Sbjct: 219 AIKDFNKAIK-LNPNYALAYN-----NRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL++ I+D DK ++L+P AY +G A LG EEA+ ++K
Sbjct: 307 NRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362
>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 838
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN G+ AI+ +D+ L+ P Y EA RG A E AI+ + EA++
Sbjct: 521 NRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALKFK 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +AL+F+P+ + + RG+ A+
Sbjct: 581 PDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIAS 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL + A+ LG+ L +G + A ++ KA+++ ++ EAW + +L
Sbjct: 641 YGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RGL L LG+ ++AI
Sbjct: 701 RFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAI 740
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G++ AI+ D+ L+ P E RG A LE AI+ + +A++ P
Sbjct: 183 RGLALGNLGRFEEAIASCDKALEIKPDLHEVWNNRGRALDDLGRLEDAIASYDKALKFKP 242
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG +AI KAL+F+P+ ++ + RG+ F A+
Sbjct: 243 DKHEAWSSRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASY 302
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K + A+ GLAL ++G ++A + KA+++ + E W + DL
Sbjct: 303 DKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEVWYNRGYALDDLGR 362
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL + L + + +A++ RGLLLH LG+ ++A+
Sbjct: 363 FEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEAL 401
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 355 LKETSNEAKRNKKFCVTRIS----------KSKSISVDFR---LSRGIAQVNEGKYASAI 401
+K +EA N+ + + + K+ I D+ +RG+A VN G+ AI
Sbjct: 511 IKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAI 570
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +D+ LK P EA RG A E AI+ + EA++ P EAW RG A
Sbjct: 571 ASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVN 630
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG +AI KAL+ +P+ + + G+V A+ +++ + A+
Sbjct: 631 LGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWF 690
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ L ++G +++A + KA++ ++ EAW +L E+A+ + L
Sbjct: 691 NQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFK 750
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAI 605
+A+++RGL+L+ LG+ ++AI
Sbjct: 751 PDKHEAWYIRGLVLYNLGRFEEAI 774
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 136/616 (22%), Positives = 254/616 (41%), Gaps = 77/616 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
L + I D+ ++ A ++R + L KL L++ AI D L + +
Sbjct: 224 LGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQD---AIASYDKALKFKPDKHE 280
Query: 72 ICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N R L + I DKAL+ P L +A+ ++G A LGR+EEA++ W+K
Sbjct: 281 VWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKAL 340
Query: 131 E--HALHQSA--------DLKQFLELEELLTAAKQDRSVTCEY-DVSNS----MSSLTVS 175
E LH+ DL +F EE LT+ + + +Y + N+ + +L
Sbjct: 341 EIKPDLHEVWYNRGYALDDLGRF---EEALTSYNKALELKPDYHEAWNNRGLLLHNLGRF 397
Query: 176 ESGLNANDKMSETSENH-----NKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAK 229
E L + +K E ++ N+ + D + + + K+ PD ++
Sbjct: 398 EEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRG- 456
Query: 230 GGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASR--------DASEINRQSSDDF 281
+ L G+L E +++ + + H + + I +S D
Sbjct: 457 ---------NALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIEAIASYDK 507
Query: 282 DICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS---DNKS 338
+ P D + N R G + + ++S +L E++ ++ +
Sbjct: 508 ALEIKPDDHEAWNNR-GYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRR 566
Query: 339 SDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI------SVDFR------- 384
D+ S + L FK D+ +EA N+ + + + + ++ F+
Sbjct: 567 EDAIASWDEALKFKPDL-----HEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAW 621
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A VN G+ AI+ + + LK P + EA G +E AI+ + +A++
Sbjct: 622 YNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEI 681
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G LG EAI KAL+F+ + + + RG+ F A+
Sbjct: 682 KPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAIT 741
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+K + A+ GL L ++G +++A ++ KA++ + EAW +L
Sbjct: 742 SWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAWYIRGLALYNL 801
Query: 558 TQFYQDLANSEKALEC 573
+ + +A+ +KALE
Sbjct: 802 GRIKEAIASYDKALEI 817
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A V G+ AI+ +D+ LK P E RG A E AI+ + +A++
Sbjct: 250 SRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASYDKALKFK 309
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI KALE +P+ ++ + RG F A+
Sbjct: 310 PDLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEVWYNRGYALDDLGRFEEALTS 369
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + A+ GL L ++G +++A ++ KA++L ++ EAW + L
Sbjct: 370 YNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAWNNRGNALDKLG 429
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + + +A++ RG L LG+ ++AI
Sbjct: 430 RIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAI 469
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +D+ L+ P EA RG A +E AI+ + +A++ P EAW RG A
Sbjct: 501 AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVAL 560
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG +AI +AL+F+P+ + + RG+ A+ +K + A
Sbjct: 561 VNLGRREDAIASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEA 620
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ GLAL ++G + A ++ KA++L +F EAW +L DL E A+ + L
Sbjct: 621 WYNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALE 680
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
I + +A+ +G++LH LG+ ++AI
Sbjct: 681 IKPDYHEAWFNQGVVLHNLGRFEEAI 706
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A VN G+ AI+ +D+ LK P EA RG A E AI+ + +A++
Sbjct: 589 NRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKLK 648
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW G LG +AI KALE +P+ + +G+V F A+
Sbjct: 649 PDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIAS 708
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ GLAL ++G +++A + +A++ + EAW +L
Sbjct: 709 FGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLG 768
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L +A+++RGL L+ LG+ K+AI
Sbjct: 769 RFEEAIASYDKALKFKPDKHEAWYIRGLALYNLGRIKEAI 808
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G++ AI+ +D+ LK P EA RG A E AI+ + +A++ P
Sbjct: 285 RGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKP 344
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E W RG A LG EA+ +KALE +P+ + + RG++ F A+
Sbjct: 345 DLHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSY 404
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L + A+ G AL +G ++A ++ KA++L ++ EAW + ++L
Sbjct: 405 NKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGR 464
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
E+A+ + L I + +A++ R LLL LG+
Sbjct: 465 LEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR 498
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+ AI+ +D+ LK P EA RG A L+ AI+ + +A++
Sbjct: 216 NRGRALDDLGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQDAIASYDKALKFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A LG EAI KAL+F+P+ + + RG+ + A+
Sbjct: 276 PDKHEVWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIAS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G AL +G +++A ++ KA++L ++ EAW + +L
Sbjct: 336 WDKALEIKPDLHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLG 395
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL + L + + +A++ RG L LG+ ++AI
Sbjct: 396 RFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAI 435
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G+ AI+ +D+ L+ P E RG A E A++ + +A++ P
Sbjct: 319 RGLALYNLGRREEAIASWDKALEIKPDLHEVWYNRGYALDDLGRFEEALTSYNKALELKP 378
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG LG EA+ +KALE +P+ + + RG K A+
Sbjct: 379 DYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASY 438
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L + A+ G AL ++G ++A ++ KA+++ ++ EAW + +L
Sbjct: 439 DKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR 498
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + L I +A++ RG L LG+ ++AI
Sbjct: 499 IE-AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAI 536
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 4/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +K+ + D+ + RG A G+ AI+ +D+ L+ P Y EA RG A
Sbjct: 400 ALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNAL 459
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE AI+ + +A++ P EAW R LG +EAI KALE +P+ +
Sbjct: 460 RNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLG-RIEAIASYDKALEIKPDDHEA 518
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG A+ +++ + A+ G+AL ++G + A + +A++
Sbjct: 519 WNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALK 578
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + +L E A+ + L +A++ RGL L LG+ + AI
Sbjct: 579 FKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAI 638
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G++ A++ +++ L+ P Y EA RG E A++ + +A++
Sbjct: 352 NRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELK 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI KALE +P+ + + RG A+
Sbjct: 412 PDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIAS 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ L L ++G +A ++ KA+++ + EAW + +L
Sbjct: 472 YDKALEIKPDYHEAWNNRVLLLDNLGRI-EAIASYDKALEIKPDDHEAWNNRGYALVNLG 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L I + +A++ RG+ L LG+ + AI
Sbjct: 531 RIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAI 570
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ ++G+ N G++ AI+ F + LK Y EA RG A
Sbjct: 671 AIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLAL 730
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + EA++ P EAW RG LG EAI KAL+F+P+ +
Sbjct: 731 VNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEA 790
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ RG+ + A+ +++ ++ A +AL +G
Sbjct: 791 WYIRGLALYNLGRIKEAIASYDKALEIKPDDHLASKNRTIALKKLG 836
>gi|91976940|ref|YP_569599.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisB5]
gi|91683396|gb|ABE39698.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisB5]
Length = 629
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 6/220 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ +GKYA AI D+ +K+DP +P A RG A+ + + A+SDF EA++ +P A
Sbjct: 117 IEQGKYAGAIVELDRAVKQDPKFPFAYAWRGVAKMRIGKFDEAMSDFNEALKLDPRNAFA 176
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+RG A AL ++ + + D++ ALE + +A RG++ D + A+ DL+ VK
Sbjct: 177 LGQRGNAFFALRDNGKGLADVNAALEIDNTAAAPYAFRGMIYSDMGDQDKALADLTRAVK 236
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSE 568
L+ A+ LG S + E++K+ A+ +A++L N +L G++ + L +
Sbjct: 237 LNPNLPPAHGGLGSVYSKLQEFEKSLAAYNRALELAPNTAAYLSGRGYV---HFSLGEYD 293
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + Q + I+ RF++ Y RG AIKD
Sbjct: 294 RAITDISQAIAINSRFARPYINRGRAYIATNNLSAAIKDF 333
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ GK+ A+S F++ LK DP AL RG A R+ ++D A++ +
Sbjct: 146 RGVAKMRIGKFDEAMSDFNEALKLDPRNAFALGQRGNAFFALRDNGKGLADVNAALEIDN 205
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A + RG + +G+ +A+ DL++A++ PN G V K ++F ++
Sbjct: 206 TAAAPYAFRGMIYSDMGDQDKALADLTRAVKLNPNLPPAHGGLGSVYSKLQEFEKSLAAY 265
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L + + G S+GEY +A +AI ++ F + + + Y N
Sbjct: 266 NRALELAPNTAAYLSGRGYVHFSLGEYDRAITDISQAIAINSRFARPYINRGRAYIATNN 325
Query: 567 SEKALECLQQVLYIDKR 583
A++ + L I+ +
Sbjct: 326 LSAAIKDFDEALKIEPK 342
>gi|359460635|ref|ZP_09249198.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 562
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A Y +A+ ++Q+L+ D PEA + RG A A AAI D+ + I+
Sbjct: 268 LNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKF 327
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + A+ RG A + +G++ A+ D SKA++ +P A L+ RG+V + A+
Sbjct: 328 QPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIA 387
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A +++D + +AY G A G + A +AI + A+ + +
Sbjct: 388 DFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTA 447
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+E A+ QVL +D +F+ AY RG L G A+KD S
Sbjct: 448 GQNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYS 492
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ + +G + AI +D+ ++ + Y A + RG A ++AI+D+T+ IQ
Sbjct: 197 LRQGVEKYGQGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSQSAIADYTKVIQL 256
Query: 445 NP-------------------------------------SAGEAWKRRGQARAALGESVE 467
NP EA+ RG+A AA G +
Sbjct: 257 NPKNIELTKIYLNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLA 316
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AIQD + ++F+P SA RG+ K D A+ D S ++LD + +A GL
Sbjct: 317 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQ 376
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G + A +IQ+D + A+ + + N+E A+ Q + + + A
Sbjct: 377 LNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLA 436
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
Y+ RG+ GQ++ AI D S T+ P T NL
Sbjct: 437 YYNRGIAHSTAGQNEAAIADYSQ-VLTLDPKFAAAYTNRGNL 477
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A G + +AI + Q++K P A RG A + + A++D+++AIQ
Sbjct: 302 LNRGRAHAASGNHLAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQL 361
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A RG + G S +AI D + +++ + A RG + K + AA+
Sbjct: 362 DPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIA 421
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + + E+ AY G+A S+ G+ + A + + + LD F A+ + +
Sbjct: 422 DFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQ 481
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + AL+ Q + + + AY+ R L+ L Q+++A+ D ++
Sbjct: 482 GDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEALSDYQQAAK 530
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + + RG+ Q+N+G AI+ F ++ D Y A RGTA
Sbjct: 356 SKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGN 415
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI+DFT+AI N A+ RG A + G++ AI D S+ L +P A RG
Sbjct: 416 TEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRG 475
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++ D +AA++D S ++ + EN +AY L S++ +Y++A
Sbjct: 476 NLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEA 521
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G A+A++ + + ++ DP Y AL RG + Q + AI+DFT +IQ
Sbjct: 336 FNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQM 395
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--HERGIVNFKFKDFNAA 502
+ A+K RG A G + AI D ++A+ F N+ D L + RGI + AA
Sbjct: 396 DTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITF--NAEDTLAYYNRGIAHSTAGQNEAA 453
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S + LD + +AYT G ++ G+ A + + +AI+ + A+ + +
Sbjct: 454 IADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHS 513
Query: 563 DLANSEKALECLQQVLYI 580
L E+AL QQ I
Sbjct: 514 ALRQYEEALSDYQQAAKI 531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 378 SISVDFRLS-----RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQR 429
SI +D + + RG A + G +AI+ F Q + ED + A RG A +
Sbjct: 392 SIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAG 448
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ EAAI+D+++ + +P A+ RG AA G+ A++D S+A+E P +A + R
Sbjct: 449 QNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNR 508
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
+++ + + A+ D K+
Sbjct: 509 ALIHSALRQYEEALSDYQQAAKI 531
>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
Length = 815
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K D Y +A I RG Q E E A+ D+ AI+ N
Sbjct: 181 NRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLN 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG GE +A++D + A++F+ N D RG++ + + A++D
Sbjct: 241 PNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKD 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL++ AY G+ +GE KKA + + +AI+L+ + + + + +L
Sbjct: 301 YNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELG 360
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+KAL+ + V+ ++ ++ AY RG+L G+ + A+KD
Sbjct: 361 EKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDF 403
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ A+ F+ +K +P A RG + E E A+ DF AI+ + + +A+
Sbjct: 155 QGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYI 214
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKL 512
RG GE +A+ D + A++ PN A + RG+V FK K + A+ED + +K
Sbjct: 215 NRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVV-FKQKGEKQKALEDFNMAIKF 273
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D AY G+ GE +KA + + AI+L+RN+ +A+ + ++ L ++KAL+
Sbjct: 274 DSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQ 333
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
Q + ++ +++ Y+ RG+L LG+ +KA++D +
Sbjct: 334 DYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKN 371
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGI G++ A+ ++ +K +P +A G Q + + A+ +F AI+
Sbjct: 112 INRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKL 171
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG GE +A++D + A++F+ N D RG++ + + A+
Sbjct: 172 NPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALH 231
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ +AY G+ GE +KA E AI+ D N+++A+ + ++
Sbjct: 232 DYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQ 291
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
EKAL+ + +++ ++ AY RG+L LG+ KKA++D + R + I
Sbjct: 292 GEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYN 351
Query: 625 RWRNLC 630
R C
Sbjct: 352 RGVLFC 357
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 42/266 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ +A+ FD +K +P Y A RG Q ++E A++DF AI+ N
Sbjct: 385 NRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKLN 444
Query: 446 PSAGEAWKRRGQ------------------------------ARAAL----GESVEAIQD 471
P+ A++ RG R + GE V+A+QD
Sbjct: 445 PTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQD 504
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KA++ N A + RG++ + + A++D + +KL+ +AY G+ G
Sbjct: 505 FDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQG 564
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQ--------FYQDLANSEKALECLQQVLYIDKR 583
E +KA + + AI+L+ N+ A+ + + Y+ EKAL+ + ++
Sbjct: 565 EKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNPN 624
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLS 609
F+ AY+ RG+L G+ +KA++D +
Sbjct: 625 FATAYYNRGVLFGEQGEKEKALQDYN 650
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A+ F +++ +P Y A RG Q E+E A+ DF AI+ N
Sbjct: 351 NRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLN 410
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A++ RG G+ A+ D A++ P A RG + K + + A++D
Sbjct: 411 PNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQD 470
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ AY GL GE +A + KAIQL+ N+ A+ + Y +
Sbjct: 471 YNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQG 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EKAL+ + ++ + AY RG+L G+ +KA +D +
Sbjct: 531 EIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYN 574
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 8/233 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K +P Y A RG Q E E A D+ AI+ N
Sbjct: 521 NRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLN 580
Query: 446 PSAGEAWKRRGQ---ARAAL-----GESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
P+ A++ RG+ +R + GE +A+QD A++ PN A + RG++ +
Sbjct: 581 PNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQG 640
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + ++L+ +AY G+ GE +KA + + KAI+ + + A+ +
Sbjct: 641 EKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNR 700
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + E AL+ V++++ + AY RG L +G+ +KA++D +
Sbjct: 701 GNLFDERGEKEDALKDYNIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQ 753
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ AI ++ ++K + A I RG E E A+ D+ AI+ N
Sbjct: 79 NRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLN 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P+ +A+ G G+ +A+Q+ + A++ PN A + RG+V FK K + A+E
Sbjct: 139 PNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVV-FKQKGEKEKALE 197
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K D AY G+ GE +KA + AI+L+ N+ A+ + ++
Sbjct: 198 DFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVVFKQK 257
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KALE + D + AY RG+L G+ +KA+KD ++
Sbjct: 258 GEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNT 303
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +G+ A+ + +K +P + A RG Q E E A+ D+ EAIQ NP
Sbjct: 598 KGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNP 657
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG GE +A+QD +KA++ P A + RG + + + A++D
Sbjct: 658 NYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDY 717
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ + AY G IGE +KA + +AI+L+ N+ A+ + ++
Sbjct: 718 NIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGE 777
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
EKAL+ + +++ +S AY+ RGL L
Sbjct: 778 KEKALQDYNMAIQLNRNYSTAYYNRGLSL 806
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 103/191 (53%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG Q E E A+ D+ +AI NP + A+ RG GE +A++D + A++
Sbjct: 10 LNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIKL 69
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PN + RG++ + + + A++D + +KL++ N +AY G+ +GE++KA +
Sbjct: 70 NPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQ 129
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ AI+L+ N +A+ +L D +KAL+ + ++ + AY+ RG++
Sbjct: 130 DYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQK 189
Query: 599 GQHKKAIKDLS 609
G+ +KA++D +
Sbjct: 190 GEKEKALEDFN 200
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 8/232 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
+RG+ +G+ A ++ +K +P Y A RG + Q E E A+ D
Sbjct: 555 NRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQD 614
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ AI+ NP+ A+ RG GE +A+QD ++A++ PN A RG++ +
Sbjct: 615 YHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQG 674
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + +K + + +AY G GE + A + + I L+ N +A+ +
Sbjct: 675 EIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYINR 734
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++ EKAL+ Q + ++ ++ AY+ RG+L+ G+ +KA++D +
Sbjct: 735 GALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYN 786
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K D Y +A I RG Q E E A+ D+ AI+ N
Sbjct: 249 NRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLN 308
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG LGE+ +A+QD ++A+ P A + RG++ + + A++D
Sbjct: 309 RNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQD 368
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ +AY G+ GE + A + AI+L+ N+ A+ + + +
Sbjct: 369 FKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQG 428
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
E AL + ++ ++ AY RG L G+ KA++D + + + I TR
Sbjct: 429 QIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTR 488
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K S +D ++RG+ +G+ A+ ++ +K + Y +A I RG E + A
Sbjct: 272 KFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKA 331
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ D+ +AI+ NP + RG LGE +A+QD + PN A RG++
Sbjct: 332 LQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYG 391
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A++D +KL+ +AY G+ G+ + A AI+L+ + A+
Sbjct: 392 EQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAY 451
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + +KAL+ + ++ + AY+ RGL+ G+ +A++D
Sbjct: 452 QNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDF 505
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ +++ ++ +P Y A + RG Q E+E A+ D+ +AI+ N
Sbjct: 631 NRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDYNKAIKQN 690
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG GE +A++D + + PN AD RG + + + A++D
Sbjct: 691 PKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYINRGALFGEIGEKEKALQD 750
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +KL+ +AY G+ + GE +KA + + AIQL+RN+ A+
Sbjct: 751 FNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYNMAIQLNRNYSTAY 799
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+++ D L+RG+ +G+ A+ +++ + +P A RG + E E A+ D
Sbjct: 3 TVNADECLNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKD 62
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ AI+ NP+ A+ RG GE +AIQD + ++ N+ + RGI+ +
Sbjct: 63 YNMAIKLNPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLG 122
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + +KL+ + A+ LG L G+ KA + AI+L+ N A+ +
Sbjct: 123 EHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNR 182
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ EKALE + D + AY RG+L G+ +KA+ D +
Sbjct: 183 GVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYN 234
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++RG+ G+ A+ ++Q ++ +P Y RG E + A+ DF
Sbjct: 312 ADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKN 371
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ NP+ A++ RG GE A++D A++ PN A RG++ +
Sbjct: 372 VIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIE 431
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D +KL+ SAY G GE KA + + AI+L+ N+ A+
Sbjct: 432 NALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLI 491
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ +AL+ + + ++ ++ AY+ RG+L G+ +KA++D +
Sbjct: 492 FKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFN 540
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 79/146 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ +G+ A+ +++ +K++P Y A RG + E E A+ D+ I
Sbjct: 664 MNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFL 723
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG +GE +A+QD ++A++ PN A + RG++ + + A++
Sbjct: 724 NPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQ 783
Query: 505 DLSACVKLDKENKSAYTYLGLALSSI 530
D + ++L++ +AY GL+L I
Sbjct: 784 DYNMAIQLNRNYSTAYYNRGLSLRYI 809
>gi|428304133|ref|YP_007140958.1| hypothetical protein Cri9333_0484 [Crinalium epipsammum PCC 9333]
gi|428245668|gb|AFZ11448.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 1192
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG VN+ ++ AI+ ++ +K +P Y A + RG + Q++ + AI D+ AI+ NP
Sbjct: 688 RGNVYVNQKQWDKAINDYNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINP 747
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG + + +AI D + A++ N+A RG+V +K K +N A++D
Sbjct: 748 QYANAYLMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDY 807
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY+ GL ++ KA + + AI+++ + +A+ + +
Sbjct: 808 NTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQ 867
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+KA++ + I+ + Y LRGL+ Q KAI D ++ + + PH
Sbjct: 868 WDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIK-INPH 918
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ L RG+ VN+ ++ AI F +K +P A RG Q++ + AI DF A
Sbjct: 888 DYSL-RGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSA 946
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP A+ RG+ + + +AI D A++ PN A + RG V K ++
Sbjct: 947 IKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDL 1006
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D ++ +K++ + AY G+ S+ +++ A +AI+++ F EA+ + Y
Sbjct: 1007 AINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVY 1066
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N AL +Q L I++ A G + + +G+ + AI+
Sbjct: 1067 HTQENYSAALSDYKQALSINENLIAAISNIGFINYEMGETEAAIQ 1111
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + ++ AI ++ +K +P A RG Q++ + AI D+T AI+ N
Sbjct: 789 ARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKIN 848
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG+ + +AI D + A++ PN+A+ RG+V K ++ A++D
Sbjct: 849 PQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDD 908
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY+ GL ++ KA + AI+++ A+ + Y
Sbjct: 909 FTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQK 968
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KA++ + + I+ + AY+ RG + Q AI D +S
Sbjct: 969 QWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNS 1013
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + ++ AI + +K +P Y +A RG Q++ + AI DFT AI+ N
Sbjct: 823 ARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKIN 882
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + +AI D + A++ P+ A RG+V + K ++ A++D
Sbjct: 883 PNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDD 942
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + SAY G S ++ KA + AI+++ N A+ + Y +
Sbjct: 943 FKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQK 1002
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+ A+ + I+ ++++AY+ RG++
Sbjct: 1003 QWDLAINDYNSAIKINPQYAEAYYNRGIV 1031
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++ ++ AI ++ +K +P Y A + RG + Q++ + AI D+ AI+
Sbjct: 720 LMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYNTAIKI 779
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG + +AI D + A++ P A RG+V + K ++ A++
Sbjct: 780 NSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAID 839
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ + AY+ G ++ KA + AI+++ N + Y +
Sbjct: 840 DYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQ 899
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KA++ + I+ + AY +RGL+ Q KAI D S
Sbjct: 900 KQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKS 945
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + ++ AI F +K +P A + RG ++Q++ + AI DF AI+ NP
Sbjct: 926 RGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINP 985
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG + AI D + A++ P A+ + RGIV K + A+ D
Sbjct: 986 NDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADW 1045
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY G + Y A + +A+ ++ N + A ++ ++
Sbjct: 1046 NQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSINENLIAAISNIGFINYEMGE 1105
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+E A++ Q+V+ +D + ++ + ++ G+ K ++
Sbjct: 1106 TEAAIQQWQKVVKVDSQQAEPQLALAVAMYTKGESDKGVQ 1145
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + ++ AI F +K +P RG Q++ + AI DFT AI+ NP
Sbjct: 858 RGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINP 917
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG + +AI D A++ P A RG V K ++ A++D
Sbjct: 918 HDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDF 977
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY G + ++ A + AI+++ + EA+ + Y +
Sbjct: 978 KSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKK 1037
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E AL Q + I+ +F++AY RG + H + A+ D
Sbjct: 1038 WELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSD 1078
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++ ++ AI ++ +K + A RG Q++ AI D+ AI+
Sbjct: 754 LMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKI 813
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + +AI D + A++ P AD RG V+ + K ++ A++
Sbjct: 814 NPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAID 873
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ N + Y+ GL + ++ KA + AI+++ + A+ YQ+
Sbjct: 874 DFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQ 933
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KA++ + + I+ + AY RG + Q KAI D S
Sbjct: 934 KQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKS 979
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG + ++ AI F +K +P A RG Q++ + AI+D+ AI+
Sbjct: 958 LSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKI 1017
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EA+ RG + + A+ D ++A++ P A+ RG V ++++AA+
Sbjct: 1018 NPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALS 1077
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++ +A + +G +GE + A + K +++D E L
Sbjct: 1078 DYKQALSINENLIAAISNIGFINYEMGETEAAIQQWQKVVKVDSQQAEPQLALAVAMYTK 1137
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
S+K ++ Q L +DK+F+ +L+
Sbjct: 1138 GESDKGVQLAAQALKLDKQFADVAYLK 1164
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ + KY+ A + + P Y AL + ++L+ A+ +AI
Sbjct: 586 GRGLVLYAQKKYSEASVAISTAISKKPDYYPALKLQSQVLTQLKQLDEALVAIEKAIVIQ 645
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + + L EAI + K ++ P +A + RG V K ++ A+ D
Sbjct: 646 PQDPNLYFIKTSILSDLKRYPEAIATIQKGIDISPRAA-LYWIRGNVYVNQKQWDKAIND 704
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + +AY G S ++ KA + + AI+++ + A+ Y D
Sbjct: 705 YNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQK 764
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KA++ + I+ + AY RGL+ + Q KAI D ++
Sbjct: 765 QWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNT 809
>gi|425448155|ref|ZP_18828134.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
gi|389731136|emb|CCI04771.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
Length = 260
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYT 160
>gi|441498582|ref|ZP_20980777.1| TPR repeat protein [Fulvivirga imtechensis AK7]
gi|441437688|gb|ELR71037.1| TPR repeat protein [Fulvivirga imtechensis AK7]
Length = 370
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 14/262 (5%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
LK N+ + + ++ +SK + RG A+ G + AI ++ L+ D Y
Sbjct: 29 LKSIENDQYKEAIELLNKVVESKPKDKEVYNKRGFARNQLGNFYGAIGDYNIALEIDSTY 88
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
+AL+ RG A+ + A+ D+ +AI+ P + +A+ R A+ L + A D SK
Sbjct: 89 ADALLNRGEAKFNLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLEGAYFDFSK 148
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +PN AD RG++ + +++ +A++D + + LD + Y Y +A +I + +
Sbjct: 149 AIEMDPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNIDQVE 208
Query: 535 KAEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+A + + KAI++D N A L + LA+ +K++E +
Sbjct: 209 EAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDED-------PDT 261
Query: 588 YHLRGLLLHGLGQHKKAIKDLS 609
Y+LRG++ + L H+ AI+D S
Sbjct: 262 YNLRGVVKYNLENHEGAIEDYS 283
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 317 SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS 376
+L D E Y K+ + KS+ + SR+ + + L+ F ++ +
Sbjct: 101 NLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLE--------GAYFDFSKAIEM 152
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
D +RG+ + +Y SAI +++ L D P+ R A+ ++E A+
Sbjct: 153 DPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNIDQVEEAMK 212
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI+ + + ++ R A++ L + A+ D K++E D + RG+V +
Sbjct: 213 DYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDEDPDTYNLRGVVKYNL 272
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ A+ED S ++LD N Y L+ +I +YK A + +I+L
Sbjct: 273 ENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIEL 322
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S D L+RG A+ N G A+ +D+ +K +P +A R A+ +LE A D
Sbjct: 86 STYADALLNRGEAKFNLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLEGAYFD 145
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESV------------------------------- 466
F++AI+ +P+ + + RG +A L E +
Sbjct: 146 FSKAIEMDPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNID 205
Query: 467 ---EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EA++D +KA+E + R + +D+ A+ D ++L E+ Y
Sbjct: 206 QVEEAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDEDPDTYNLR 265
Query: 524 GLALSSIGEYKKAEEAHLKAIQLD 547
G+ ++ ++ A E + KAI+LD
Sbjct: 266 GVVKYNLENHEGAIEDYSKAIELD 289
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
+ Y+K+ D+ D R+ F D ++E + + + T K ++
Sbjct: 178 DDYNKALSLDDSDPDIYNYRAVAKFNIDQVEEAMKDYNKAIEMDTTDPIKYEN------- 230
Query: 386 SRGIAQVNEGKYASAISIFD---QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
R +A+ Y A++ +D ++ EDP + RG + E AI D+++AI
Sbjct: 231 -RALAKSTLEDYEGALADYDKSIELFDEDP---DTYNLRGVVKYNLENHEGAIEDYSKAI 286
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P + R ++ A+ + AI+D S ++E P + H+RG+ D
Sbjct: 287 ELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIELFPTDPETFHQRGLAKISKGDKYDG 346
Query: 503 VEDLSACVKLDKEN 516
DL+ V+L E+
Sbjct: 347 CLDLNTAVELGSED 360
>gi|431808625|ref|YP_007235523.1| hypothetical protein BPP43_10480 [Brachyspira pilosicoli P43/6/78]
gi|430781984|gb|AGA67268.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 925
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 125/228 (54%), Gaps = 1/228 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ KY +I+ F+++++ +P + RG + ++ E +I+DF + I+
Sbjct: 246 FNRGVSKAKLEKYEESIADFNKVIELNPKNEISYFARGVSNYELKKYEESIADFNKVIEL 305
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG A+A LG+ E+I D +KA+E PN+ RG+ K + + A+E
Sbjct: 306 NPNNKEAYFFRGLAKADLGQYKESIADFNKAIELNPNNERAYLNRGVSKVKLERYEEAIE 365
Query: 505 DLSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++L+ + N+ AY G++ + + Y++A KAI+L+ N A+ +
Sbjct: 366 DFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLI 425
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L +K+++ + + ++ K Y RG+ + L ++++AI+D +
Sbjct: 426 LGLYKKSIKDFNKAIKLNPNDEKLYFNRGISNYELKKYEEAIEDFNKA 473
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
L+RG+++V +Y AI F++ ++ +P EA RG ++A E AI+DF +AI+
Sbjct: 348 LNRGVSKVKLERYEEAIEDFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIE 407
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ A+ +G + LG ++I+D +KA++ PN + RGI N++ K + A+
Sbjct: 408 LNPNNEYAYFNKGFLKLILGLYKKSIKDFNKAIKLNPNDEKLYFNRGISNYELKKYEEAI 467
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
ED + +KL+ ++ AY + ++ +YK+A
Sbjct: 468 EDFNKAIKLNPNDEDAYFNRAILKINLKKYKQA 500
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ + G+Y +I+ F++ ++ +P A + RG ++ E AI DF +AI+ NP
Sbjct: 316 RGLAKADLGQYKESIADFNKAIELNPNNERAYLNRGVSKVKLERYEEAIEDFNKAIELNP 375
Query: 447 SAGE-AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E A+ RG ++A L EAI D +KA+E PN+ +G + + +++D
Sbjct: 376 DNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLILGLYKKSIKD 435
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +KL+ ++ Y G++ + +Y++A E KAI+L+ N +A+
Sbjct: 436 FNKAIKLNPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPNDEDAY 484
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V+ K AI + D+ +++D + + RG + + I DF ++I+ E
Sbjct: 13 VSSKKVEEAIKLIDEAIEKDNNDSDLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEV 72
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG A+A LG+ EAI+D +KA+E PN+ RG + + + A+ED + ++
Sbjct: 73 YFFRGLAKADLGQYKEAIEDFNKAIELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIE 132
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
L+ N+ Y +GL+ + ++++A E K I+L+ N A+
Sbjct: 133 LNPNNERTYFSIGLSKVELEKHEEAIEDFNKVIELNPNNKRAY 175
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+ K I F++ ++ E RG A+A + + AI DF +A
Sbjct: 37 DLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEVYFFRGLAKADLGQYKEAIEDFNKA 96
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ A+ RG ++A L + EAI+D +KA+E PN+ G+ + +
Sbjct: 97 IELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIELNPNNERTYFSIGLSKVELEKHEE 156
Query: 502 AVEDLSACVKLDKENKSAY 520
A+ED + ++L+ NK AY
Sbjct: 157 AIEDFNKVIELNPNNKRAY 175
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ +Y AI+ F++ ++ +P A +G + + +I DF +AI+
Sbjct: 383 FNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLILGLYKKSIKDFNKAIKL 442
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ + + RG + L + EAI+D +KA++ PN D R I+ K + AV
Sbjct: 443 NPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPNDEDAYFNRAILKINLKKYKQAVN 502
Query: 505 DLSACVK 511
D K
Sbjct: 503 DFKIFAK 509
>gi|425434489|ref|ZP_18814958.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
gi|389676033|emb|CCH94905.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
Length = 260
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL +R +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTPNPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|429123527|ref|ZP_19184060.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
gi|426280600|gb|EKV57611.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
Length = 352
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKL-SFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N + E+YS + ++ E +K+ S K + +N A NKK + ++
Sbjct: 39 NNIDPENYSDFDDFNERAKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A +G ++A L+ AI ++
Sbjct: 99 H-DYN-SKGIHKSANGEYAEAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ P +A+ RG ++ LG EAI+D KAL +PN D + +G++ + F
Sbjct: 157 KAIKLKPDYADAYYNRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLF 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +K+ ++ Y G + ++ Y+++ + + KAI+L+ + A+ +
Sbjct: 217 KEAIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L E+A++ + + + ++ AY+ RG LG +K A+KD
Sbjct: 277 AKDSLGLYEEAIKDFDKAIELKPDYADAYNNRGYSKENLGLYKDALKD 324
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 105/201 (52%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI++ G AI +D+ +K P Y +A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKGISKAKLGLLKEAIEEYDKAIKLKPDYADAYYNRGLIKSDLGFLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG EAI+D +KA++ + A I + RG + + +
Sbjct: 192 ALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADDDAVIYNNRGNSKYNLELYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+++D +KL+ SAY G A S+G Y++A + KAI+L ++ +A+ +
Sbjct: 252 ESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYNNRGYS 311
Query: 561 YQDLANSEKALECLQQVLYID 581
++L + AL+ ++ L +D
Sbjct: 312 KENLGLYKDALKDYKKALKLD 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
K++S+D L ++G+ + G + AI F++ +K +D +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E +I D+ +AI+ NP A+ RG A+ +LG EAI+D KA+E +P+ AD +
Sbjct: 247 LELYEESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
RG + A++D +KLD N+ A
Sbjct: 307 NRGYSKENLGLYKDALKDYKKALKLDPNNEYA 338
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K D +RG+ + + G AI FD+ L DP +A +G + A
Sbjct: 160 KLKPDYADAYYNRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEA 219
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I DF +AI+ + RG ++ L E+I+D KA++ P A + RG
Sbjct: 220 IKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGNAKD 279
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ A++D ++L + AY G + ++G YK A + + KA++LD N
Sbjct: 280 SLGLYEEAIKDFDKAIELKPDYADAYNNRGYSKENLGLYKDALKDYKKALKLDPN 334
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 51/207 (24%)
Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
A+ F EL ISD T I S N + + +G ++A GE
Sbjct: 56 AKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDYHDYNSKGIHKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + +GI K LGL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGISKAK---------------------------LGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ +A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IKLKPDYADAYYNRGLIKSDLGFLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGSR 613
AY+ +G+L + LG K+AIKD + +
Sbjct: 202 AYNNKGVLENELGLFKEAIKDFNKAIK 228
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A + I AKL L+ + KAI+ L A +Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIK-LKPDYADAY-----Y 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 171 NRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A +LG EEA+ ++K E
Sbjct: 273 NRGNAKDSLGLYEEAIKDFDKAIE 296
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ KAI+ L+ A +Y NR L L++ I+D DKA++L P AY
Sbjct: 253 SIKDYDKAIK-LNPYYASAYN-----NRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G + LG ++AL ++K
Sbjct: 307 NRGYSKENLGLYKDALKDYKKA 328
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
++ ++I +D L+ +G A G Y AI FD+ ++ DP +G A
Sbjct: 146 LAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGM 205
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q AI + EAI+ +P +AW RG A LG+ EAI L KA+E +P A +
Sbjct: 206 QGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWN 265
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + ++ A++ ++LD E A++ G L+ G+Y +A +A+ +AI+L
Sbjct: 266 NKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLH 325
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N+++AW + + N +A++ + + +D + ++ +G L LG + + I
Sbjct: 326 PNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGI 383
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA N+G Y A FD+ ++ DP Y A +G A + + AI + EAI+ +
Sbjct: 96 NKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLD 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW ++G A G EAIQ +A+ +P A + +G+ ++ A+
Sbjct: 156 PELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPA 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD E+ A+ G AL+ +G+Y +A A KAI+LD W + +
Sbjct: 216 YDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
N +A++ + + +D + A+ +G +L G++ +AI+ R + P+ +
Sbjct: 276 NYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIR-LHPNYV 329
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +G Y +I +D+ ++ DP + A +G A Q A F EAI+ +
Sbjct: 62 NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G+A + G AI +A+ +P A H++G F+ ++ A++
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD E+ + + G+AL G Y +A A+ +AI+LD +AW + +L
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELG 241
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
++A+ L + + +D + ++ +G L G + +AI+ R + P L
Sbjct: 242 KYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIR-LDPEL 294
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y I +D+ ++ DP + + +G + Q + + AI + EAI+ +P + W
Sbjct: 377 GNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVS 436
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-FNAAVEDLSACVKLD 513
+G + G+ EAIQ +A+ +P AD+ +G +F+ + ++ A++ ++LD
Sbjct: 437 KGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKG-NSFRMQGKYDEAIQAYDEAIRLD 495
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E A+ G AL +Y +A +A+ +AI+L+ ++ EAW + ++A++
Sbjct: 496 PEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQA 555
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + +D F+ + +G++L LG+ +A
Sbjct: 556 YDEAIRLDPEFAYPWFSKGVVLEYLGKVAEA 586
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D S+G+ G Y A+ +D+ ++ DP Y A +G A +Q + +I + E
Sbjct: 23 ADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDE 82
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P AW +G A G EA + +A+ +P A + +G + ++
Sbjct: 83 AIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYT 142
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ ++LD E +A+ G AL G Y +A +A +AI+LD W +
Sbjct: 143 GAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVA 202
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N +A+ + + +D + A++ RG L+ LG++ +AI L
Sbjct: 203 LGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHAL 250
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI FD+ ++ DP Y +A +G ++ A+ + EAI+ +P AW
Sbjct: 2 QGNYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWN 61
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+G A G E+I+ +A+ +P A + +GI ++ A ++LD
Sbjct: 62 NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E A+ G ALS G Y A A+ +AI+LD AW + N +A++
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +D + ++ +G+ L G + +AI
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAI 213
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +S+G + +GKY AI +D+ ++ DP + + +G + Q + + AI + E
Sbjct: 397 ADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDE 456
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P + W +G + G+ EAIQ +A+ +P A + +G ++ ++
Sbjct: 457 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYD 516
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHL 557
A++ ++L+ + K A+ G AL G+Y +A +A+ +AI+LD F W G +
Sbjct: 517 EAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVV 576
Query: 558 TQFYQDLANSEKALECLQQVLY 579
++ +A + +A +++ Y
Sbjct: 577 LEYLGKVAEANEAYAKAEELGY 598
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +++G A +G Y AI +D+ ++ DP +G A + I + E
Sbjct: 329 VDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDE 388
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-F 499
AI+ +P + W +G + G+ EAIQ +A+ +P AD+ +G +F+ + +
Sbjct: 389 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKG-NSFRMQGKY 447
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A++ ++LD E + G + G+Y +A +A+ +AI+LD F AW +
Sbjct: 448 DEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGN 507
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++A++ + + ++ + +A++ +G L G++ +AI+
Sbjct: 508 ALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQ 554
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI FD+ ++ DP A +GT A Q + + AI + EAI+ +P+ +AW
Sbjct: 275 GNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWIN 334
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A G EAIQ +A+ +P++A + +G + ++ + ++LD
Sbjct: 335 KGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDP 394
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E + G + G+Y +A +A+ +AI+LD + W ++ ++A++
Sbjct: 395 EEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAY 454
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +D + + +G G++ +AI+
Sbjct: 455 DEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQ 486
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI F EAI+ +P +AW +G G EA+Q +A+ +P A + +G+
Sbjct: 8 AIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNKGLAL 67
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+++ +++ ++LD E +A+ G+AL + G Y +A +AI+LD + A
Sbjct: 68 DYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLDPEYAGA 127
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
W + + + N A+ + + +D + A+H +G L G + +AI+ R
Sbjct: 128 WYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIR 187
Query: 614 TMMPHLIWNLTRWRN 628
+ P + T W N
Sbjct: 188 -LDPE---DATTWYN 198
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH- 556
++ A+E ++LD E A+ GL L G Y +A +A+ +AI+LD + AW +
Sbjct: 4 NYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNK 63
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L YQ N +++++ + + +D F+ A++ +G+ L G + +A +
Sbjct: 64 GLALDYQ--GNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATR 112
>gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 280
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 9/225 (4%)
Query: 364 RNKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
RN+ VT I ++ S + +F L +G Q + G + +AI+ + + + + Y
Sbjct: 35 RNQDLLVTEIGVNPPKRPTRKTSGAGEFYL-QGQNQHSRGNFQAAIAAYSKSISLNSDYA 93
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A RG A E AI+D+ +++Q NP+ E + RG ARA+LG+ AI+D ++A
Sbjct: 94 PAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEA 153
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ PN A+ + RG + + NAA+ED + +++D+ AY G A SS+G K
Sbjct: 154 IRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSK 213
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A + +AI+L+ F A+ + + + +AL+ LQ+ I
Sbjct: 214 AIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQKAATI 258
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AAI+ ++++I N A+K RG A L AI D +++L+ PN + + RG
Sbjct: 75 FQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRG 134
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A+ED + ++L A+ G + ++ G A E + +AI++D+N+
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNY 194
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y L N+ KA+ Q + ++ +F+ AY+ RG G ++A++DL
Sbjct: 195 SVAYNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDL 252
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AGE + +GQ + + G AI SK++ + A RG+ F + A+ D
Sbjct: 58 GAGEFY-LQGQNQHSRGNFQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDY 116
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ + Y Y G A +S+G+ K A E + +AI+L N+ EA+ + + N
Sbjct: 117 NQSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGN 176
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
ALE Q + ID+ +S AY+ RG LG KAI D + R
Sbjct: 177 KNAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSKAIADYNQAIR 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSL 62
++R L I + +E +R+ A A R + K +L ++++AIRI
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRI---- 190
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
Q+Y + NR YS L I D ++A++L+P AY +G AF++ G K A
Sbjct: 191 -DQNYSVA-YNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRA 248
Query: 123 LSVWEK 128
L +K
Sbjct: 249 LQDLQK 254
>gi|425450205|ref|ZP_18830037.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
gi|389769061|emb|CCI05989.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
Length = 260
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL +R +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|189347838|ref|YP_001944367.1| hypothetical protein Clim_2365 [Chlorobium limicola DSM 245]
gi|189341985|gb|ACD91388.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 308
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI Q EG AI F + L D A RG A++ +++ AI+D+T AI+ NP
Sbjct: 34 GIEQGREGNVREAIDFFSKALVLDTENAGAYYNRGLAKSLGGDVKGAITDYTRAIELNPK 93
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A RG ARA+LG+ A++D+SKA+ +P + + RG +DF A+ D S
Sbjct: 94 LLGAHNNRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYS 153
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ AY GLA S G+ K A AI+ D+ + AW + +
Sbjct: 154 RSISLNPRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDF 213
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A++ + L ++ +AY+ R LG + A+ DL+
Sbjct: 214 NGAVQDYNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLT 255
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI+ + + ++ +P A RG ARA + A+ D ++AI +
Sbjct: 66 NRGLAKSLGGDVKGAITDYTRAIELNPKLLGAHNNRGFARASLGDFRGAVEDISKAIALD 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + RG A++AL + AI D S+++ P A + RG+ D A+ D
Sbjct: 126 PEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGDPKGAISD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ D+ +A+ G A + G++ A + + KA+ L+ +EA+ + L
Sbjct: 186 FSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRAYAKAALG 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A++ L ++L + +AY+ RG+ LG AI DL
Sbjct: 246 DFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGAIGDL 288
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + A+ + + DP PE RGTA++ ++ + AI+D++ +I N
Sbjct: 100 NRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLN 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A++ G+ AI D S A+E + + RG DFN AV+D
Sbjct: 160 PRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQD 219
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ E AY A +++G+++ A + + +Q+ + EA+ + + L
Sbjct: 220 YNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLG 279
Query: 566 NSEKALECLQQVLYIDKRFS 585
+ A+ LQ+ + R S
Sbjct: 280 DISGAIGDLQKAATLGDRLS 299
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I++D F +RG A+ + AI+ + + + +P A RG A++ +
Sbjct: 119 SKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGD 178
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AISDF+ AI+ + AW RG AR A G+ A+QD +KAL + + R
Sbjct: 179 PKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRA 238
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
DF AV+DL+ +++ +N AY G+A +G+ A
Sbjct: 239 YAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGA 284
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E GI + + A++ S + LD EN AY GLA S G+ K A + +AI+L+
Sbjct: 32 EFGIEQGREGNVREAIDFFSKALVLDTENAGAYYNRGLAKSLGGDVKGAITDYTRAIELN 91
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L A + L + A+E + + + +D + Y+ RG L K AI D
Sbjct: 92 PKLLGAHNNRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIAD 151
Query: 608 LSSGSRTMMPHL 619
S S ++ P L
Sbjct: 152 YSR-SISLNPRL 162
>gi|440751922|ref|ZP_20931125.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176415|gb|ELP55688.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 260
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL +R +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 VSPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|425440193|ref|ZP_18820501.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
gi|389719413|emb|CCH96738.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
Length = 260
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
>gi|34540729|ref|NP_905208.1| hypothetical protein PG0982 [Porphyromonas gingivalis W83]
gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 750
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y AI + + ++ D + A RG A + E AI DF++AI+ +
Sbjct: 30 NRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELD 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A + G +AI+D S+A+E + + RG+ + + A++D
Sbjct: 90 DKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKD 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD + AY G A S G YKKA + + +AI+LD F A+ Y +
Sbjct: 150 YSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKG 209
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A++ Q + +D +++ AYH RG G +KKAIKD S
Sbjct: 210 SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYS 253
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + +RG+A +G Y AI F + ++ D + A GRG A + +
Sbjct: 49 SKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKKGW 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+++AI+ + + RG A G EAI+D SKA+E + A H RG
Sbjct: 109 YKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKDYSKAIELDDKYAPAYHGRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A++D S ++LD + AY G A G Y++A + + +AI+LD +
Sbjct: 169 NAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKGSYEEAIKDYSQAIELDDKY 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ Y +KA++ Q + +D ++ Y+ RG+ + +G +K+ D ++
Sbjct: 229 APAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNT 288
Query: 611 GSRTMMPHLIWNLTR 625
++ + + NL R
Sbjct: 289 VLYLILSNELINLIR 303
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG +G EAI+D SKA+E + + RG+ FK + A++D S +
Sbjct: 27 AYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAI 86
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD + AY G A S G YKKA + + +AI+LD ++ + Y + + E+A
Sbjct: 87 ELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ + + +D +++ AYH RG G +KKAIKD S
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYS 185
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG E AI D+++AI+ + A+ RG A G EAI+D SKA+
Sbjct: 27 AYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAI 86
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + H RG K + A++D S ++LD + Y G+A G Y++A
Sbjct: 87 ELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ + KAI+LD + A+ Y +KA++ Q + +D +F+ AY+ RG
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYC 206
Query: 597 GLGQHKKAIKDLS 609
G +++AIKD S
Sbjct: 207 EKGSYEEAIKDYS 219
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 479 EPNSADIL--HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EPN + + + RG+ + + A++D S ++LD + AY G+A G Y++A
Sbjct: 19 EPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEA 78
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+LD F+ A+ Y +KA++ Q + +D ++ Y+ RG+
Sbjct: 79 IKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYC 138
Query: 597 GLGQHKKAIKDLS 609
G +++AIKD S
Sbjct: 139 EKGSYEEAIKDYS 151
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS + +++ AY G+ +G Y++A + + KAI+LD F+ A+ + Y
Sbjct: 14 LSNVPEPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKG 73
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E+A++ + + +D +F AYH RG G +KKAIKD S
Sbjct: 74 SYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYS 117
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++SKAI LD A +Y R YS+ +K I+D +A++LD AY
Sbjct: 146 AIKDYSKAIE-LDDKYAPAYH-----GRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYY 199
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A+ G EEA+ + + E
Sbjct: 200 GRGNAYCEKGSYEEAIKDYSQAIE 223
>gi|425460167|ref|ZP_18839649.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
gi|389827162|emb|CCI21743.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
Length = 260
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
Length = 400
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A+ ++++L+E P Y EA G+G A + AI + +AI+ +P EAW
Sbjct: 169 GSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYY 228
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + + A+ + ++
Sbjct: 229 KGVDLDSLGSHRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINS 288
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + +++A EA+ KA QLD +LEA+ L L N E+ALE
Sbjct: 289 ENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETY 348
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ L +D+ + ++ + + L LG+ ++A
Sbjct: 349 EKALELDQGAADSWFGKAVCLSFLGREEEA 378
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWK 453
GK+ AI FD+ +++DP L + A +F R E A+ + +A++ N + W
Sbjct: 67 GKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGR-FEEALKLYQKAVEINSEDADLWN 125
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ + +GE A++ KALE P+ + + + + + + AVE ++
Sbjct: 126 NMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAYEKVLEES 185
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ K A+ G+AL +G Y +A A+ KAI++D FLEAW + L + +AL+
Sbjct: 186 PDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKA 245
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +D A++ G+ L L ++++AI
Sbjct: 246 YEKAVELDPENDDAWNNMGIDLENLEKYEEAI 277
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI D +A + E D+ N+ F SQ+ + + KA QLDP L+
Sbjct: 267 LENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLE 326
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSA 138
AY G + L EEAL +EK E L Q A
Sbjct: 327 AYTSLGFVLAQLKNFEEALETYEKALE--LDQGA 358
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L K ++ I D+ + D + + A L S + +A+++ + + E D
Sbjct: 65 KLGKFNEAIIAFDKAIEKDPKNIYLLNNKA--AALESFGRFEEALKLYQKAVEINSEDAD 122
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL+L P A+ K S G EEA+ + Y
Sbjct: 123 LWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV----EAY 178
Query: 131 EHALHQSADLKQ 142
E L +S D K+
Sbjct: 179 EKVLEESPDYKE 190
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 59/121 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ K FN A+ ++ D +N AL S G +++A + + KA++
Sbjct: 56 LNECGLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGRFEEALKLYQKAVE 115
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ Y + E+A+E + L + + A++ + L L G +++A+
Sbjct: 116 INSEDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV 175
Query: 606 K 606
+
Sbjct: 176 E 176
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L ++ +A+ + +L +S + ++ + Q+ + I DKA+++DP L+
Sbjct: 165 LSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLE 224
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ KG +LG +AL +EK E
Sbjct: 225 AWYYKGVDLDSLGSHRQALKAYEKAVE 251
>gi|75910751|ref|YP_325047.1| hypothetical protein Ava_4554 [Anabaena variabilis ATCC 29413]
gi|75704476|gb|ABA24152.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 547
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 4/226 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G Y +AI+ + Q + + ++ RG A + EAAI D+ +AI+ NP
Sbjct: 293 RGLTYYQLGDYEAAIADYSQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINP 352
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A +K R +AR+ LG++ AI+D ++A++ P AD RGI + A
Sbjct: 353 HAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLL----ATQPGF 408
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + +AY G A + IG+Y A E + +AIQ++ +A+ + DL +
Sbjct: 409 TQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGD 468
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
E A+ Q + I+ ++ AY+ RG + G+ + AI D +
Sbjct: 469 EEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAA 514
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ + G AI + Q +K +P Y + RG +R L A FT+AI+ N
Sbjct: 360 NRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY----LLATQPGFTQAIKIN 415
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+K RG ARA +G+ AI+D ++A++ P +AD + RG + D A+ D
Sbjct: 416 PNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIAD 475
Query: 506 LSACVKLDKENKSAY 520
+ ++++ AY
Sbjct: 476 YTQAIQINPSYADAY 490
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F Q +K +P A RG ARA + AI D+ +AIQ NP A +A+ RG AR LG
Sbjct: 408 FTQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLG 467
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
+ AI D ++A++ P+ AD + RG V KD A+ D + KE K A
Sbjct: 468 DEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I+++F + RG+A Y +AI ++Q ++ +P R AR+ +
Sbjct: 311 SQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGD 370
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+T+AI+ NP + +K RG +R L ++A++ PN A+ RG
Sbjct: 371 NQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRG 426
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D+ A+ED + ++++ + AY G A +G+ + A + +AIQ++ ++
Sbjct: 427 NARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSY 486
Query: 551 LEAW 554
+A+
Sbjct: 487 ADAY 490
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 75/133 (56%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A GE +I++ S+AL+ N+ ++ ++RG+ ++ D+ AA+ D S + L+ + +Y
Sbjct: 265 AQGEYTASIKNYSQALQASSNNGELYYKRGLTYYQLGDYEAAIADYSQAINLNFHDAKSY 324
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GLALS + Y+ A + + +AI+++ + + + + L +++ A+E Q + I
Sbjct: 325 HKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKI 384
Query: 581 DKRFSKAYHLRGL 593
+ +++ Y RG+
Sbjct: 385 NPQYADTYKNRGI 397
>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1056
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI+DF +A++ +P ++
Sbjct: 413 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 472
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A + GE AI + +AL+ +P A + + RG+ ++ ++ A+ D ++LD
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ YT G GE+ +A + +A++LD ++ A+ + +Q+ ++A+
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI-WNLTRWRNLCF 631
Q L +D +++ AY RG G++ +AI D + ++I +N R L F
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYN---GRGLAF 648
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 6/231 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ N+ +Y AI+ FDQ L+ DP +A+I R AF+ E + AI+++ +A+Q
Sbjct: 439 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 496
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+P RG A GE A+ D +AL+ +P A + RG V F+ K + + A
Sbjct: 497 LDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDV-FRIKGEHDRA 555
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + AY GL + GEY +A + + ++LD + A+ + +Q
Sbjct: 556 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQ 615
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ Q L + ++ AY+ RGL + G+H +AI D R
Sbjct: 616 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALR 666
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V +R +RG+A ++ G Y AI+ +Q L+ DP RG A F+ E + AI+D+ +
Sbjct: 27 VGYR-NRGLASLHNGAYDRAIADLNQALRLDPKSASTYNDRGIAFKFKGEYDRAIADYDQ 85
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DF 499
A++ +P + RG A A GE AI D ++AL P + RG V F+ K +
Sbjct: 86 ALRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDV-FRIKGEH 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D ++LD + K AY GL+ EY +A +A++LD + +
Sbjct: 145 DRAIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGD 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ ++A+ Q L +D +++ ++ RGL +G G++ +A+ D
Sbjct: 205 AFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALAD 252
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ +DQ L+ DP RG + E E AI+D+ +A++ +
Sbjct: 235 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG E +AI D +AL +P A I RG +++ A+ +
Sbjct: 295 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 354
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 355 YDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKG 414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+A+ Q L +D ++ AY+ RGL+ ++ +AI D R
Sbjct: 415 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALR 462
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP Y RG A + E A++D+ +A+Q +
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG GE AI D +AL +P + RG+V +++ A+ D
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
++LD + AY G S GEY +A + +A+Q + ++ A+ G FY+
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 651
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A+ ++ L +D + + A++ RG L+ G++ +AI DL R
Sbjct: 652 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALR 700
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ +DQ L+ DP RG + E E AI+D+ +A++ +
Sbjct: 371 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG E +AI D +AL +P A I RG +++ A+ +
Sbjct: 431 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 491 YDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKG 550
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Q L +D ++ AY+ RGL+ G++ +AI D
Sbjct: 551 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI D+ + ++ +P A+
Sbjct: 549 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYA 608
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + GE AI D +AL+ P + RG+ ++ + + A+ D ++LD
Sbjct: 609 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 668
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +A+ G AL+ GEY +A +A++L F H ++ + ++AL
Sbjct: 669 PKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALAD 728
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
L + + ++ +++ AY RG+ G+ +A+ D + R + P L + T
Sbjct: 729 LNEAVRLNPKYADAYQERGVTFQARGEPDRALADFAEAVR-LKPELEADAT 778
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RG A +G++ AI+ F+Q L +P Y A RG + E + AI+D+ +A+
Sbjct: 96 FYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIKGEHDRAIADYDQAL 155
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P A+ RG + E AI D +AL +P A I RG +++ A
Sbjct: 156 QLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRA 215
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + ++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 216 IANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFR 275
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+A+ Q L +D ++ AY+ RGL+ ++ +AI D R
Sbjct: 276 IKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALR 326
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI+DF +A++ +P ++
Sbjct: 277 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 336
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A + GE AI + +AL+ + A + + RG+ + ++ A+ D ++LD
Sbjct: 337 NRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLD 396
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ YT G GE+++A + +A++LD + A+ + +Q+ + ++A+
Sbjct: 397 PKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIAD 456
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q L +D + + Y RG G++ +AI
Sbjct: 457 FDQALRLDPKDAVIYRNRGDAFRSKGEYDRAI 488
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ N+ +Y AI+ FDQ L+ DP +A+I R AF+ E + AI+++ +A+Q
Sbjct: 303 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 360
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+ RG A GE A+ D +AL+ +P A + RG V F+ K + A
Sbjct: 361 LDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDV-FRIKGEHERA 419
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + K AY GL + EY +A +A++LD + + ++
Sbjct: 420 IADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFR 479
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Q L +D +++ ++ RGL + G++ +A+ D
Sbjct: 480 SKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALAD 524
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A GRG A + E + AI+D+ EA++ +
Sbjct: 609 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + A+ RG A GE AI DL +AL +P A+ + RG F+ K D + A+
Sbjct: 669 PKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTA-FRHKGDLDRALA 727
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFLEAWG 555
DL+ V+L+ + AY G+ + GE +A +A++L D FL+ G
Sbjct: 728 DLNEAVRLNPKYADAYQERGVTFQARGEPDRALADFAEAVRLKPELEADATFLKVRG 784
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSAC 509
++ RG A G AI DL++AL +P SA ++RGI FKFK +++ A+ D
Sbjct: 28 GYRNRGLASLHNGAYDRAIADLNQALRLDPKSASTYNDRGIA-FKFKGEYDRAIADYDQA 86
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++LD ++ Y G A + GE+ +A +A+ L+ + A+ + ++ ++
Sbjct: 87 LRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIKGEHDR 146
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
A+ Q L +D ++ AY+ RGL ++ +AI D R
Sbjct: 147 AIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALR 190
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
YR + + + + D+ +++D A T R ++ ++ ++ ++ +A+R LD
Sbjct: 513 YRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 571
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR + + I D D+ L+LDP AY +G F + G + A++
Sbjct: 572 AYN-----NRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 626
Query: 126 WEKGYEH 132
+++ +H
Sbjct: 627 YDQALQH 633
>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
Length = 458
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A + + ++ DP E+ RG QR L+ A++D+ +AI+ P +AW
Sbjct: 118 GDLNRAAADLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDAQAWSD 177
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG G++ +AI+DLS+AL +PN RG K + +V D + ++LD
Sbjct: 178 RGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEAIRLDP 237
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSEKALE 572
+ Y GL+L+++G+Y KA + +A++L NF G QF + AL
Sbjct: 238 KVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPNFFTNRGDSYQFKGEFG---AALS 294
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL-------------SSGSRTMMPHL 619
+ L +D F++ Y+ R +L +G+ +KA+ D ++G RTM+ +
Sbjct: 295 DYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGNDNAANGRRTMIAEI 354
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 402 SIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-R 459
+I DQ AL+ R A A L A+ D AI + +AW+ RG R
Sbjct: 55 AIIDQAANSSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLLR 114
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G+ A DLSKA+E +P A+ RG+V + + A+ D +KL + A
Sbjct: 115 EAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDAQA 174
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++ G+ G+ +KA +A++LD N + + Y+ L +K++ + +
Sbjct: 175 WSDRGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEAIR 234
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR-TMMPHLIWN 622
+D + + Y RGL L +G + KAI D R P+ N
Sbjct: 235 LDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPNFFTN 278
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI + L+ DP P RG A +L+ +++D EAI+ +P
Sbjct: 178 RGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEAIRLDP 237
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVED 505
E + RG + AA+G+ +AI D +AL P + RG +++FK +F AA+ D
Sbjct: 238 KVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKP-NFFTNRGD-SYQFKGEFGAALSD 295
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ +KLD Y + +GE +KA + A++LD
Sbjct: 296 YESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLD 337
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G Y AI+ +DQ L+ P P RG + F+ E AA+SD+ A++ +
Sbjct: 245 NRGLSLAAMGDYDKAIADYDQALRLAPK-PNFFTNRGDSYQFKGEFGAALSDYESALKLD 303
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
P+ + + R +GE +A+ D AL+ +P + + + R
Sbjct: 304 PNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGNDNAANGR 347
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +++ + ++ DP PE RG + A + + AI+D+ +A++
Sbjct: 211 NRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLA 270
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 271 PKP-NFFTNRGDSYQFKGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 329
Query: 506 LSACVKLDKENKSA 519
+KLD N +A
Sbjct: 330 YETALKLDPGNDNA 343
>gi|17228118|ref|NP_484666.1| hypothetical protein alr0622 [Nostoc sp. PCC 7120]
gi|17129968|dbj|BAB72580.1| alr0622 [Nostoc sp. PCC 7120]
Length = 547
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ S + + RG++ G Y +AI+ + Q + + ++ RG A + EAA
Sbjct: 281 QASSDNCELYYKRGLSYYQLGDYEAAIADYSQAININLHDAKSYHKRGLALSQLAAYEAA 340
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I D+ +AI+ NP A +K R +AR+ LG++ AI+D ++A++ P AD RGI +
Sbjct: 341 IDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY 400
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A + +K++ + +AY G A + IG+Y A E + +AIQ++ +A+
Sbjct: 401 LL----ATQPGFTQAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAY 456
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ DL + E A+ Q + I+ ++ AY+ RG + G+ + AI D +
Sbjct: 457 YNRGNARYDLGDEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAA 514
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 310 KLSSDSASLNDSNTNSE-SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKF 368
+L++ A+++D N + +SI N++ E+RS L +++ + K N ++
Sbjct: 333 QLAAYEAAIDDYNQAIRINPHAASIYKNRA----EARSHLGDNQGAIEDYTQAIKINPQY 388
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
T ++ +SR + G F Q +K +P A RG ARA
Sbjct: 389 ADTYKNRG--------ISRYLLATQPG--------FTQAIKINPNDANAYKNRGNARADI 432
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI D+ +AIQ NP A +A+ RG AR LG+ AI D ++A++ P+ AD +
Sbjct: 433 GDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYADAYYN 492
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
RG V KD A+ D + KE K A
Sbjct: 493 RGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 22/257 (8%)
Query: 354 MLKETSNEAKRN-----KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAI 401
+KE NEA+ + F T++ K K+ ++ F GI Q+ G + A
Sbjct: 146 FIKEDVNEAQSSYHLLLAGFLPTQMIKLKTGNISF----GIEQLLYGGGLWGYLEQLQAS 201
Query: 402 SIFDQILKEDPMY-----PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ + Q + P+Y PE L ++ + L I + Q + + + G
Sbjct: 202 ANYHQFQQSPPIYQYKPQPELLSKINQTQSIKPALFTGIKNILPYRQQE-AINIDYIKIG 260
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A GE +I++ S+AL+ ++ ++ ++RG+ ++ D+ AA+ D S + ++ +
Sbjct: 261 DECFAQGEYTASIKNYSQALQASSDNCELYYKRGLSYYQLGDYEAAIADYSQAININLHD 320
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+Y GLALS + Y+ A + + +AI+++ + + + + L +++ A+E Q
Sbjct: 321 AKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQ 380
Query: 577 VLYIDKRFSKAYHLRGL 593
+ I+ +++ Y RG+
Sbjct: 381 AIKINPQYADTYKNRGI 397
>gi|328872976|gb|EGG21343.1| Phosphatidylethanolamine N-methyltransferase [Dictyostelium
fasciculatum]
Length = 1335
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAVEDLSA 508
+A+KRRGQ+ A G + A+ D ++A+ + +D+ + R ++ ++ +++ A++D
Sbjct: 3 DAYKRRGQSLVAKGLDMAAMGDFTQAVALDKEGDSDLFYNRALLFYEMRNYERALKDFRR 62
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
V+LD +NK A+ +GL L+ G ++A A KAI+LD NF A+ ++ Q ++DL +
Sbjct: 63 SVELDADNKLAWNRIGLCLNVQGYPRQAFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQ 122
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L L I +S A HLRGLL G H AIKD +
Sbjct: 123 DSLASFNNALDISPSYSNALHLRGLLFFNSGYHLNAIKDWT 163
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S F +AI+ +P+ A+ GQ LG +++ + AL+ P+ ++ LH RG++
Sbjct: 90 AFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQDSLASFNNALDISPSYSNALHLRGLLF 149
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
F A++D + ++ + N + +SIG++K A
Sbjct: 150 FNSGYHLNAIKDWTEFIQNEPINIDVRQLRAITCTSIGKFKDA 192
>gi|284123878|ref|ZP_06386955.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829235|gb|EFC33646.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 237
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 106/220 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + +G ++G Y SAI +D+ + +P RG A+ + AISD+
Sbjct: 13 SAQNHVDKGNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAISDYD 72
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ E + RG A+ +G+ EAI D ++A+ PN++ + RGI
Sbjct: 73 EAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVNLGHP 132
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ D ++LD N +AY G A IG+Y +A + +AI+L+ + A+
Sbjct: 133 EAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGI 192
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+L +SE A+ + + ++ +K Y+ RG+ LG
Sbjct: 193 AKVNLGHSEAAISDFDEAIRLNPNEAKVYNNRGIANRKLG 232
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 75/170 (44%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
SN + + +G G+ AI KA+ PN A +RG + + + A+
Sbjct: 9 SNIESAQNHVDKGNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAI 68
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D ++L + Y G A IG+Y +A + +AI+L+ N A+ + +
Sbjct: 69 SDYDEAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVN 128
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L + E A+ + + +D + AY+ RG +GQ+ +AI D + R
Sbjct: 129 LGHPEAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYTEAIR 178
Score = 55.8 bits (133), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G+Y AIS + + ++ +P Y A RG A+ EAAISDF EAI+ N
Sbjct: 155 NRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGIAKVNLGHSEAAISDFDEAIRLN 214
Query: 446 PSAGEAWKRRGQARAALGESVEA 468
P+ + + RG A LG + +A
Sbjct: 215 PNEAKVYNNRGIANRKLGLTADA 237
>gi|427416698|ref|ZP_18906881.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759411|gb|EKV00264.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 272
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 102/195 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG +A Q +L AAI+ +T+ I+++ EA+ +RG A +G+ +AI D S AL
Sbjct: 48 LLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAALR 107
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ + + RG + NAA+ DL+ + LD E AY G L+ +G++ A
Sbjct: 108 LRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLAL 167
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A+ L+ + +A+ + Q Y L + + AL + +D ++AY RGLL H
Sbjct: 168 TDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHR 227
Query: 598 LGQHKKAIKDLSSGS 612
LG ++A+ DL +
Sbjct: 228 LGNSQQAMADLQQAA 242
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 353 DMLKETSNEAKRNKKFCV----TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
++L+ +AK+ + T++ ++ + + + L RGIA + G AI F L
Sbjct: 47 ELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAAL 106
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +PE RG A + AAI+D T+AI +P A+ RG A LG+ A
Sbjct: 107 RLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLA 166
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D +A+ EP++AD + R V +D A+ D ++LD E AY GL
Sbjct: 167 LTDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNH 226
Query: 529 SIGEYKKA 536
+G ++A
Sbjct: 227 RLGNSQQA 234
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ V A+Q + A+ +AD L ERG K AA+ + ++ D +N AY
Sbjct: 27 QPVRAVQP-AHAVPLMATNADELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQR 85
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G+A +G+ +A + A++L + E + H + Y +N A+ L Q + +D
Sbjct: 86 GIAYHDVGDINQAIDDFSAALRLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPE 145
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
F++AY RG +L LGQ A+ D
Sbjct: 146 FTRAYMDRGTVLAELGQFSLALTDF 170
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A ++ +AI+ Q + DP + A + RGT A + A++DF +A+ P
Sbjct: 119 RGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEP 178
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R Q L + A+ D A+ +P A+ RG++N + + A+ DL
Sbjct: 179 DNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADL 238
Query: 507 SACVKL 512
L
Sbjct: 239 QQAATL 244
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + ++++ + +F + RG G+++ A++ F Q + +P +A R
Sbjct: 128 NVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNR 187
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
R+ + A++DF AI+ +P EA+ RG LG S +A+ DL +A N
Sbjct: 188 AQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADLQQAATLFQN 247
Query: 482 SAD 484
D
Sbjct: 248 RGD 250
>gi|428310718|ref|YP_007121695.1| hypothetical protein Mic7113_2488 [Microcoleus sp. PCC 7113]
gi|428252330|gb|AFZ18289.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 548
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 1/237 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF L++GI ++ +Y AI F Q ++ + Y +A + RG R + + AI+D+T+
Sbjct: 146 DF-LNQGIEKLQNEQYKEAIEDFTQAIEINSQYADAYLLRGCTRIEIDDYQGAIADYTQT 204
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P + + RG+ AL + AI D +++++ P A+ + RG ++ +
Sbjct: 205 IQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQE 264
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +++D AY G L++ +YK+A + ++I+LD + + + + Y
Sbjct: 265 AIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAY 324
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
L N + A+ QV+ ID ++S AY +RG L L ++ AI D + +T H
Sbjct: 325 IALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNH 381
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG A + Y SAI + Q++K D Y +A RG A + + AI+DFTE
Sbjct: 315 DIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEV 374
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I++NP+ +A+ +RGQAR A+ + AIQD ++ ++ PN RG KD+N
Sbjct: 375 IKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNG 434
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AV D S ++++ Y G A S G+ + A + +AI+LD ++ A+
Sbjct: 435 AVADYSQVIQMEPNCADTYFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYAY 487
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG + Y SAI+ F Q +K +P Y EA RG + + AI+D+T+
Sbjct: 213 DIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQT 272
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ +PS +A++ RG AA + EAI D S+++ +P+ ADI RG +++ +
Sbjct: 273 IQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYIALENYKS 332
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +K+D + AY G + + +Y+ A + I+ + N +A+ Q
Sbjct: 333 AIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQAR 392
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + A++ +V+ I+ Y RG + + A+ D S
Sbjct: 393 IAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYS 440
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 44/261 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G + AI+ + Q ++ DP Y +A RG A Q + + AISD++E+I+ +P
Sbjct: 252 RGCIHSDIGNHQEAIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDP 311
Query: 447 SAGEAWKRRGQA-------RAALGESVE---------------------------AIQDL 472
S + + RRG+A ++A+G+ + AI D
Sbjct: 312 SDADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADF 371
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ ++ PN AD +RG KD+ A++D + +K++ + Y G A ++I +
Sbjct: 372 TEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKD 431
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-----ALECLQQVLYIDKRFSKA 587
Y A + + IQ++ N + T F + A SEK A+ Q + +D ++ A
Sbjct: 432 YNGAVADYSQVIQMEPNCAD-----TYFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYA 486
Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
Y R + G+ ++AI D
Sbjct: 487 YVKRAYVRKEKGKKQEAIADF 507
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L RG ++ Y AI+ + Q ++ P + RG + ++AI+DFT++
Sbjct: 179 DAYLLRGCTRIEIDDYQGAIADYTQTIQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQS 238
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP EA+ RG + +G EAI D ++ ++ +P+ D RG + +D+
Sbjct: 239 IKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKE 298
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D S ++LD + Y G A ++ YK A + + I++D + +A+
Sbjct: 299 AISDYSESIRLDPSDADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLC 358
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + + A+ +V+ + + AY RG + +K AI+D +
Sbjct: 359 AELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFT 406
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K S D RG Y AI+ F +++K +P + +A RG AR ++
Sbjct: 338 TQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKD 397
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI DFTE I+ NP+ + RG A A+ + A+ D S+ ++ EPN AD +RG
Sbjct: 398 YKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQVIQMEPNCADTYFKRG 457
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ D A+ D +KLD + AY G+ ++A KAI L
Sbjct: 458 CARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRAYVRKEKGKKQEAIADFQKAISL 513
>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
Length = 730
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 114/218 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ ++ L +P P G+G A + + A+ + EAIQ P+ +AW R
Sbjct: 376 RYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMER 435
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ LG++ EAI K ++F PN G + K +D+ A+ L+ ++++ +
Sbjct: 436 AEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPD 495
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ ++ G AL ++ Y++A +++ KA++++ +F +AW Y +L +A E +
Sbjct: 496 DEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYR 555
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + +A++ +G+ L+ L ++++A+K G++
Sbjct: 556 QAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQ 593
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++KS I+ D S +G A N Y AI +++ +K +P + +A +G +
Sbjct: 482 ALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSY 541
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A + +A+Q P +AW +G A L EA++ + + +PNS +
Sbjct: 542 MNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEA 601
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+++ + AVE + +L+ +N A+ G +L + +Y++A A+ + I
Sbjct: 602 WYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDYQQAIAAYQQVIS 661
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
LD++F AW L + L +A++ Q L
Sbjct: 662 LDKDFYPAWKSLGNSFFKLKRYSEAIKAYDQTL 694
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 105/219 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G QV YA+A+ ++ L+ +P + +G A + E AI + +A++ NPS
Sbjct: 470 GEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPS 529
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW ++G + L + +A + +A++F+P+ + +GI + + A++
Sbjct: 530 FSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFE 589
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ + A+ L ++ Y +A EA+ A +L+ +AW + L +
Sbjct: 590 EGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDY 649
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+ QQV+ +DK F A+ G L ++ +AIK
Sbjct: 650 QQAIAAYQQVISLDKDFYPAWKSLGNSFFKLKRYSEAIK 688
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK + AI +++++ P +A G + ++ A+ +++Q NP +W +
Sbjct: 443 GKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQ 502
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A L EAI+ KA++ P+ + +++G + ++ A E V+
Sbjct: 503 KGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQP 562
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL+ + Y++A +A + Q+ N EAW Q L +A+E
Sbjct: 563 DLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAY 622
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A++ +G L+ L +++AI
Sbjct: 623 NTATRLNPKNPQAWYNKGNSLYLLEDYQQAI 653
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A ++ +G ++ + + A++ A + + N + G AL ++ Y+ A EA+
Sbjct: 359 NNATKMYNKGNTLYQLQRYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAY 418
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+AIQL N+ +AW + + L + +A+ ++V+
Sbjct: 419 DEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVI 456
>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
Length = 1348
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 126/247 (51%), Gaps = 14/247 (5%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD S+G A ++ +Y AI +D+++K +P Y +A +GTA Q AI F E
Sbjct: 434 VDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDE 493
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF---KFK 497
AI+ NP +AW +G A +L + EAIQ +A P AD ++G+ + K+K
Sbjct: 494 AIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYK 553
Query: 498 DF----NAAVEDLSACVKLDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ N +++ ++ + E+ +A GLAL ++ +Y+ A +A+ +AI L
Sbjct: 554 ETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISL 613
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + AW + L ++A++ +VL ++ + A+ +G LH L +H++++K
Sbjct: 614 NPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVK 673
Query: 607 DLSSGSR 613
L R
Sbjct: 674 ALDEAIR 680
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 120/228 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A ++GKY AI +D+ ++ P Y +A +G A Q + + AI EAI +
Sbjct: 269 NKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G A G+S EAI+ +A+ P AD + +G+ ++ A++
Sbjct: 329 PENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQT 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD E+ +A+ GL L++ G+Y +A +A +AI+L+ +++AW +
Sbjct: 389 FNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQS 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A++ +V+ ++ ++ A++ +G + G++ +AIK R
Sbjct: 449 RYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIR 496
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 34/255 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +GKY AI +++ ++ DP Y A +G A Q + + AI + EAI+
Sbjct: 99 NKGLAFEKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLY 158
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P AW +G A + G EAI+ ++A+ +P N D L +G
Sbjct: 159 PEYANAWNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYA 218
Query: 499 FNAAV----EDLSA-----------------------CVKLDKENKSAYTYLGLALSSIG 531
++ A+ EDL++ ++LD EN A+ G+AL+S G
Sbjct: 219 YDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQG 278
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y +A +A+ +AI+L + +AW + ++A++ + + +D + ++++
Sbjct: 279 KYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIK 338
Query: 592 GLLLHGLGQHKKAIK 606
G+ L+ G+ +AIK
Sbjct: 339 GVALYNRGKSDEAIK 353
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N GK AI +D+ ++ P Y +A +G + Q + + AI F E I+ +P
Sbjct: 338 KGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDP 397
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G G+ EAIQ +A+ P D + +G ++ A++
Sbjct: 398 EHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAY 457
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL+ E A+ G A +S G Y +A +A +AI+ + + +AW + L
Sbjct: 458 DEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDK 517
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWN 622
E+A++ + ++ + A+ +G+ + LG++K+ I+ + + L WN
Sbjct: 518 YEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWN 573
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 114/228 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G ++GKY AI +D+ ++ +P + I +G A + + AI EAI+ +
Sbjct: 201 NKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLD 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A + G+ EAIQ +A+ P AD + +G ++ A++
Sbjct: 261 PENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQA 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD EN + + G+AL + G+ +A +A+ +AI+L + +AW + +
Sbjct: 321 SNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++A++ + + +D A++ +GL L+ G++ +AI+ R
Sbjct: 381 KYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIR 428
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A ++G Y AI +++ ++ DP + +G Q + E AI + EAI+ N
Sbjct: 167 SKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLN 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +W +G A LG+ EAI+ ++A+ +P + H +G+ ++ A++
Sbjct: 227 PEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQA 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L E A+ G AL G+Y +A +A +AI LD W +
Sbjct: 287 YDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
S++A++ + + + ++ A++ +GL L G++ +AI+ + R H+
Sbjct: 347 KSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHV 400
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +G Y AI + + ++ DP + +G A Q + + AI + EAI+ +
Sbjct: 65 NKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLD 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A G+ EAI+ ++A+ P A+ + +G + +++ A++
Sbjct: 125 PEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIKA 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD E + G L S G+Y+ A A+ +AI+L+ L +W + L
Sbjct: 185 YNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLG 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+ + + +D A+H +G+ L+ G++ +AI+
Sbjct: 245 KYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQ 285
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 111/227 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +++GKY AI ++ + DP +G A + + + AI + EAI+ +P
Sbjct: 304 KGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSP 363
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G + + G+ EAIQ ++ + +P + +G+ ++ A++
Sbjct: 364 EYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAF 423
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E A+ G AL S Y +A +A+ + I+L+ + +AW +
Sbjct: 424 DEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGR 483
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+A++ + + + ++ A++ +G+ L L ++++AI+ +R
Sbjct: 484 YNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATR 530
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ +G A Q + AI D+ EAI+ +P W +G A G+ EAI+ ++
Sbjct: 60 PDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNE 119
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ +P A+ H +G + ++ A++ + ++L E +A+ G AL S G Y
Sbjct: 120 AIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYD 179
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A +A+ +AI+LD F+ W + E A+ + + ++ ++ +G
Sbjct: 180 EAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAA 239
Query: 595 LHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRN 628
L+ LG++ +AI+ + R + P N+ W N
Sbjct: 240 LYRLGKYDEAIRASNEAIR-LDPE---NVYAWHN 269
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 48/217 (22%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A ++G+Y AI FD+ ++ +P Y +A +G A + E AI F EA + N
Sbjct: 473 SKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLN 532
Query: 446 PSAGEAWKRRGQARAALGESVE-------------------------------------- 467
P +AW ++G A LG+ E
Sbjct: 533 PEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGL 592
Query: 468 ----------AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A+Q +A+ P+ RG + ++ AV+ ++L+ E+
Sbjct: 593 ALETLDKYEDAVQAYDEAISLNPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPEDA 652
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+A+ G AL S+ E++++ +A +AI+L+ N W
Sbjct: 653 NAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCW 689
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/504 (20%), Positives = 203/504 (40%), Gaps = 54/504 (10%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
N+ +L + IR ++A++LDP + A+ KG A ++ G+ +EA+ + Y+
Sbjct: 234 INKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAI----QAYDE 289
Query: 133 ALHQSADLKQFL--ELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSE 190
A+ S + + E LL K D ++ S ++++ N +
Sbjct: 290 AIRLSPEYADAWNRKGEALLHQGKYDEAIQA------SNEAISLDPENANGWNIKGVALY 343
Query: 191 NHNKSD-ICDSSSQSRDVSETCSKSSHDPDLC---NGRSDEAKGGSSVPVSKSGLHINGK 246
N KSD + ++ +S + + ++ L G+ DEA + + H+
Sbjct: 344 NRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAW 403
Query: 247 L-REVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTH 305
+ ++ N+ G D ++ A +A +N + D + +D S R+
Sbjct: 404 YNKGLTLNNQGKYD--EAIQAFDEAIRLNPEYVDAWYSKGNALDSQS---RYDEAIQAYD 458
Query: 306 DV-------HDKLSSDSASLNDSNTNSES---YSKSSISDNKSSDSTESRSKLSFKWDML 355
+V D +S + N +E+ + ++ + + +D+ ++ D
Sbjct: 459 EVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKY 518
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISI-------FDQIL 408
+E TR++ + D L +G+A + GKY I + +D L
Sbjct: 519 EEAIQAFDE-----ATRLNPEDA---DAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDL 570
Query: 409 KEDPMYPEALIGRGTARAFQR-------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +P A + +G A + + E A+ + EAI NP AW+ RG A +
Sbjct: 571 RWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWENRGAALYS 630
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG+ EA+Q + L P A+ ++G ++ +V+ L ++L+ + +
Sbjct: 631 LGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCWL 690
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQ 545
L I +Y +A A +AI+
Sbjct: 691 IKSFNLLIIEKYDEAINASEEAIR 714
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S + W +G A G EAIQD +A+ +P + +G+ K ++ A++
Sbjct: 56 NESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIK 115
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++LD E +A+ G AL G+Y +A +A+ +AI+L + AW
Sbjct: 116 AYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQ 175
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N ++A++ + + +D F + +G L G+++ AI
Sbjct: 176 GNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAI 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F + D + +G + +++ A++D ++LD E + GLA G+Y +A
Sbjct: 55 FNESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAI 114
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A+ +AI+LD + AW + ++A++ + + + ++ A++ +G L+
Sbjct: 115 KAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYS 174
Query: 598 LGQHKKAIKDLSSGSRTMMPHLIWNLTRWRN 628
G + +AIK + R + P +W WRN
Sbjct: 175 QGNYDEAIKAYNEAIR-LDPEFMW---PWRN 201
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 28/249 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + GKY A+ +D++L+ +P A +G A E E ++ EAI+ N
Sbjct: 623 NRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLN 682
Query: 446 PSAGEAWKRRG-------QARAALGESVEAIQDLSK---------ALEFEPNSADILHER 489
P+ W + + A+ S EAI+ ++ +L E ++A + R
Sbjct: 683 PNDAGCWLIKSFNLLIIEKYDEAINASEEAIRAYNETITTYEEIVSLNPENSTASNIKSR 742
Query: 490 ------------GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
GI+ + ++N A++ + V L+ +++ G L+ G+Y +A
Sbjct: 743 TLIAKGNGWALKGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAI 802
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
EA AI L+ AW + + E+A+ + + ++ A++ +GL L+
Sbjct: 803 EAIDMAISLNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYS 862
Query: 598 LGQHKKAIK 606
G + +AI+
Sbjct: 863 QGNYSEAIQ 871
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + +Y A+ F++ + +P +G Q + AI AI NP
Sbjct: 754 KGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAISLNP 813
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G A G+ EAI +A+ P+ D + +G+ + +++ A++
Sbjct: 814 ESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAIQAY 873
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ L+ + A+ G AL ++ + +A AH + D N
Sbjct: 874 DRAIDLNSQLVQAWYNKGDALDALKNFTQAAMAHSLGRERDMN 916
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 429 RELEAAISDFTEAIQSNP--------------SAGEAWKRRGQARAALGESVEAIQDLSK 474
R I+ + E + NP + G W +G E EA+Q ++
Sbjct: 714 RAYNETITTYEEIVSLNPENSTASNIKSRTLIAKGNGWALKGIILGEQHEYNEAMQAFNE 773
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ P + I +G + A+E + + L+ E+ A+ Y G AL G+++
Sbjct: 774 AVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAISLNPESALAWNYKGAALRGQGKHE 833
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A A+ +AI+L+ + +AW + N +A++ + + ++ + +A++ +G
Sbjct: 834 EAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAIQAYDRAIDLNSQLVQAWYNKGDA 893
Query: 595 LHGLGQHKKA 604
L L +A
Sbjct: 894 LDALKNFTQA 903
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 3 KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
K LDS+ R ++ I DE+++++ A A ++ S +++AI+ D
Sbjct: 440 KGNALDSQSRYDEA---IQAYDEVIKLNPEYADAWNSK--GTAFNSQGRYNEAIKAFDEA 494
Query: 63 LAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
+ ++ E D N + L+ ++ I+ D+A +L+P A++ KG AF LG+ +E
Sbjct: 495 IRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKE 554
Query: 122 ALSV 125
+ V
Sbjct: 555 TIQV 558
>gi|445064286|ref|ZP_21376363.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
gi|444504339|gb|ELV05024.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
Length = 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 120/222 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+Y AI +D+ +K +P +A +G A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGQYLEAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG ++ LG EAI+D KAL +PN D H +G++ + F A++D
Sbjct: 163 ADYTDAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ ++ Y G + ++ Y+++ + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A++ + + ++ ++ AY+ RG LG +++A+KD
Sbjct: 283 LYEEAIKDFDKAIKLNPDYADAYNNRGYSKENLGLYEEALKD 324
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 105/201 (52%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GIA+ G AI +++ ++ Y +A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG EAI+D +KA++ + A I + RG + + +
Sbjct: 192 ALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADDDAVIYNNRGNSKYNLELYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+++D +KL+ AY G A ++G Y++A + KAI+L+ ++ +A+ +
Sbjct: 252 ESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYNNRGYS 311
Query: 561 YQDLANSEKALECLQQVLYID 581
++L E+AL+ ++ L +D
Sbjct: 312 KENLGLYEEALKDYKKALKLD 332
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ N Y +I +D+ +K +P Y A RG A+ E AI DF +AI+ N
Sbjct: 239 NRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLN 298
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
P +A+ RG ++ LG EA++D KAL+ +PN+
Sbjct: 299 PDYADAYNNRGYSKENLGLYEEALKDYKKALKLDPNN 335
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG+ + + G AI FD+ L DP +A +G + AI DF +
Sbjct: 166 TDAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNK 225
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ + RG ++ L E+I+D KA++ PN A + RG +
Sbjct: 226 AIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYE 285
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
A++D +KL+ + AY G + ++G Y++A + + KA++LD N
Sbjct: 286 EAIKDFDKAIKLNPDYADAYNNRGYSKENLGLYEEALKDYKKALKLDPN 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
K++S+D L ++G+ + G + AI F++ +K +D +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E +I D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ P+ AD +
Sbjct: 247 LELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
RG + A++D +KLD N+ A
Sbjct: 307 NRGYSKENLGLYEEALKDYKKALKLDPNNEYA 338
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 51/207 (24%)
Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
A+ F EL ISD FT + + + +G ++A G+ +
Sbjct: 56 AKTFNEELNKIISDKIYLIGSFTNIVDNKKKVDIDSLNILTDYHDYNSKGIYKSANGQYL 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + +GI A T LG
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGI---------------------------AKTKLGFL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ +A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYNKA-------IELRADYTDAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGSR 613
AYH +G+L + LG K+AIKD + +
Sbjct: 202 AYHNKGVLENELGLFKEAIKDFNKAIK 228
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A + I KL L+ ++KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKA 226
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIKDFDKA 294
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ KAI+ L+ A +Y NR L L++ I+D DKA++L+P AY
Sbjct: 253 SIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G + LG EEAL ++K
Sbjct: 307 NRGYSKENLGLYEEALKDYKKA 328
>gi|427710488|ref|YP_007052865.1| hypothetical protein Nos7107_5206 [Nostoc sp. PCC 7107]
gi|427362993|gb|AFY45715.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 609
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 373 ISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I+ +DF ++R G+A+ G Y A++ F Q L+ P Y RG
Sbjct: 135 INPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQYAAVYSSRGNIFHI 194
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E E AI+D A+Q +P EA+ RG ALG+ AI D ++AL+ P+ A +
Sbjct: 195 LEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQINPHFAQAYY 254
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+V KD+ AA+ D + ++L+ ++ AY GL +++G++ A + +A+ +
Sbjct: 255 NRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKN 314
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+G L L + + + +L I +++ Y R LG ++ AI D
Sbjct: 315 PTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILD 374
Query: 608 LS 609
+
Sbjct: 375 YN 376
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI+ +++ L+ +P + +A RG R++ ++ AAI+DF +A+Q NP +A+
Sbjct: 230 GDYPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYE 289
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG RA LG+ AI D +AL P A + + D+ + D + +++
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E Y A +G+Y+ A + +A+QL N A+ + L + A+E
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
Q + ID FS AY RG L LG ++A+ D + + + P L+
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIK-INPSLV 454
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 109/214 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI +++ L+ P A GRG AR ++ AA+ ++ +AI+ +P A+
Sbjct: 366 GDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCN 425
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG A+ D ++A++ P+ + + RG +++ +D++ A+ D + ++++
Sbjct: 426 RGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTTALQINP 485
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + Y+ A ++ +Y+KA + +AI LD +F E W H + L + + AL L
Sbjct: 486 NSAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADL 545
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q L ++ AY LR + L + AI D
Sbjct: 546 NQALQRQPHWASAYMLRADVYRQLEDFQGAIADF 579
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISD 437
++ D ++G + +G + AI+ + + ++ P + EA RG + R+ AAI+D
Sbjct: 1 MNADDFFNQGFNKNLQGDFQGAIADYTEAIQLKPNFAEAYYNRGNIFYSSLRDYRAAIAD 60
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +AIQ P+ EA+ RG +L + EAI + AL P A+ H RG V
Sbjct: 61 FHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRGNVYCALG 120
Query: 498 DFNAAVEDLSACVKLDKENKS--------AYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+++ A+ D ++++ E + A+ Y G+A S G+Y+ A +A+Q
Sbjct: 121 EYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQ 180
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + L E+A+ ++ L +D +AYH RG + LG + AI D +
Sbjct: 181 YAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYN 240
Query: 610 SGSRTMMPHL 619
+ + PH
Sbjct: 241 R-ALQINPHF 249
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI+ F + ++ P + EA RG + E AI+++ A+ NP E+ RG
Sbjct: 54 YRAAIADFHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRG 113
Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
ALGE AI D +A+E P + A H RG+ + D+ A+ D
Sbjct: 114 NVYCALGEYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQ 173
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ + + Y+ G + EY++A H +A+QLD + +EA+ + L +
Sbjct: 174 ALQWYPQYAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYP 233
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + L I+ F++AY+ RGL+ L + AI D +
Sbjct: 234 GAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFN 274
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + Y +AI+ F+Q L+ +P +A RG RA + AI+D+ +A+ N
Sbjct: 255 NRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKN 314
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + AR LG+ I D + L+ P A+ +R D+ A+ D
Sbjct: 315 PTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILD 374
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L +AY GLA ++ +Y A E + +AI++D +F A+ + + L
Sbjct: 375 YNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLG 434
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++AL Q + I+ +AY+ RG L + L + AI D ++
Sbjct: 435 AEQRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTTA 480
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G + AI+ ++Q L ++P AR + + I+D +Q +P
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E + R AR LG+ AI D ++AL+ PN A + RG+ +D+ AAVE+
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K+D + AY G AL +G ++A + +AI+++ + +EA+ + + L +
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQD 469
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ L I+ + Y R + L ++KAI D +
Sbjct: 470 YHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYN 512
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 11/255 (4%)
Query: 364 RNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R+ + + K+ + +F +RG + Y AI+ ++ L +P E+ G
Sbjct: 52 RDYRAAIADFHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHG 111
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPS--------AGEAWKRRGQARAALGESVEAIQDL 472
RG E + AI+D+ +AI+ NP A+ RG AR+ G+ A+ D
Sbjct: 112 RGNVYCALGEYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADF 171
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL++ P A + RG + +++ A+ D ++LD AY Y G ++G+
Sbjct: 172 QQALQWYPQYAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGD 231
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A + +A+Q++ +F +A+ + L + A+ Q L ++ +AY+ RG
Sbjct: 232 YPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERG 291
Query: 593 LLLHGLGQHKKAIKD 607
L+ LG AI D
Sbjct: 292 LVRATLGDFPGAITD 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYP 415
+ EA ++ V +++ I DF + RG A G A++ ++Q +K +P
Sbjct: 395 AREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLV 454
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG+ ++ AI+D+T A+Q NP++ + R A AL + +AI D ++A
Sbjct: 455 EAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQA 514
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +P+ A+ + RG D A+ DL+ ++ SAY
Sbjct: 515 IVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAY 559
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +RG Y AI+ + L+ +P R +A ++ + AI+D+ +
Sbjct: 454 VEAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQ 513
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI +PS E W RG++R LG+ A+ DL++AL+ +P+ A R V + +DF
Sbjct: 514 AIVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQLEDFQ 573
Query: 501 AAVEDL--SACVKLDKENKSAYTYLGLALSSI 530
A+ D SA + + N Y + A++ +
Sbjct: 574 GAIADFQQSANIYYQEGNIEYYQQMLTAIAQL 605
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S F R A Y AI+ ++Q + DP + E RG +R +L+ A++D
Sbjct: 487 SAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADLN 546
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+A+Q P A+ R L + AI D + SA+I ++ G + +
Sbjct: 547 QALQRQPHWASAYMLRADVYRQLEDFQGAIADFQQ-------SANIYYQEGNIEY 594
>gi|384215071|ref|YP_005606236.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
gi|354953969|dbj|BAL06648.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
Length = 461
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A + + ++ DP EA RG QR L+ A++D+ +AI+ P +AW
Sbjct: 121 GDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSD 180
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG G++ +AI+DLS+AL +PN RG K + AV D ++LD
Sbjct: 181 RGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDP 240
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALE 572
+ Y GL L+++GEY KA + +A++L NF G Q +L AL
Sbjct: 241 KVPEYYDNRGLVLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSHQLKGELG---AALS 297
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L ID F++ Y+ R +L +G+ KKA+ D
Sbjct: 298 DYEAALKIDPNFAQTYNNRAVLYKKMGERKKALAD 332
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 402 SIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-R 459
+I DQ AL+ R A A L A+ D AI N +AW+ RG R
Sbjct: 58 AIIDQTANSSADRAAALLVRADANARTSGGLTQALRDIDRAIALNGRNAKAWRLRGDLLR 117
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G+ A DLSKA+E +P A+ RG+V + + A+ D +KL ++ A
Sbjct: 118 EAGGDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQA 177
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++ G+ G+ +KA +A++LD N A+ + Y+ L +KA+ + +
Sbjct: 178 WSDRGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIR 237
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR-TMMPHLIWN 622
+D + + Y RGL+L +G++ KAI D R P+ N
Sbjct: 238 LDPKVPEYYDNRGLVLAAMGEYDKAIADYDQALRLAPRPNFFTN 281
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI + L+ DP P A RG A +L+ A++D EAI+ +P
Sbjct: 181 RGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDP 240
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E + RG AA+GE +AI D +AL P + RG + + AA+ D
Sbjct: 241 KVPEYYDNRGLVLAAMGEYDKAIADYDQALRLAPRP-NFFTNRGDSHQLKGELGAALSDY 299
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A +K+D Y + +GE KKA + A++LD
Sbjct: 300 EAALKIDPNFAQTYNNRAVLYKKMGERKKALADYETALKLD 340
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A++ + ++ DP PE RG A E + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLVLAAMGEYDKAIADYDQALRLA 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 274 PRP-NFFTNRGDSHQLKGELGAALSDYEAALKIDPNFAQTYNNRAVLYKKMGERKKALAD 332
Query: 506 LSACVKLDKENKSA 519
+KLD N++A
Sbjct: 333 YETALKLDPGNENA 346
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+Y AI+ +DQ L+ P P RG + + EL AA+SD+ A++ +
Sbjct: 248 NRGLVLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSHQLKGELGAALSDYEAALKID 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ + + R +GE +A+ D AL+ +P + + + R + + F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERKKALADYETALKLDPGNENAANGRRSMVAEIAKFGA 362
>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
Length = 738
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A + +D+ ++ P Y EA IGRG A ++ + AI+ F A++ + EAW +
Sbjct: 416 RYEEARNAYDKAIQIQPDYAEAWIGRGNALDSLQQYKEAINSFDRALEFKSDSLEAWNNK 475
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L + +AI KA+E +PN A + RG + + AV+ + V+ +
Sbjct: 476 GNVQIKLQKYSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPD 535
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+A+ G AL ++ +Y++A E++ KA+Q NF +AW +L E+A
Sbjct: 536 FPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFD 595
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + + S+A++ RG LH L ++++A+
Sbjct: 596 QAVKFNPDDSEAWYNRGWSLHQLQRYQEAV 625
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS S++ ++G Q+ KY+ AI+ FD+ ++ P Y RG A R+ E A+
Sbjct: 465 KSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQYEEAVK 524
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A++ P AW +RG A L + EA++ KA++F+PN + RG
Sbjct: 525 SYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNL 584
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + A VK + ++ A+ G +L + Y++A ++ KAIQL + F +A +
Sbjct: 585 RQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFYQAQYN 644
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + L + A +VL I +A++ RG L L +++ AI
Sbjct: 645 LGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAI 693
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ +++ ++ P Y A G+G + E A + + +AIQ P EAW R
Sbjct: 382 RYDDALASYNRAVELKPEYAAAWNGKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIGR 441
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +L + EAI +ALEF+ +S + + +G V K + ++ A+ ++L
Sbjct: 442 GNALDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPN 501
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G AL ++ +Y++A +++ KA++ +F AW +L ++A+E
Sbjct: 502 YAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYD 561
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + F KA++ RG L L Q+++A
Sbjct: 562 KAVQFQPNFYKAWYSRGSALLNLRQYEQAF 591
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R + V +K+ DF RG A +N KY A+ +D+ ++ P + +A
Sbjct: 517 RQYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYS 576
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG+A R+ E A + F +A++ NP EAW RG + L EA+ +KA++
Sbjct: 577 RGSALLNLRQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRK 636
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ G V +K K + A + +++ + A+ G AL ++ Y+ A +++
Sbjct: 637 KFYQAQYNLGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSY 696
Query: 541 LKAIQLDRNFLEA 553
KA+Q ++ A
Sbjct: 697 NKALQYKPDYQAA 709
>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
Length = 1196
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ AI+ ++++++ P A RG A + E AI+ + + I+
Sbjct: 703 NRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFK 762
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG + EAI KA+E +P+ + RGIV FK F A+
Sbjct: 763 PDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALAS 822
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G AL + +K+A + KAI++ ++ AW + ++L
Sbjct: 823 YDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKAIEIKADYHYAWNNRGWALRNLG 882
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+A+ + L I +A++ RG+ L LG+ ++A+ L
Sbjct: 883 RFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEALASL 925
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D RG+A N G+ AI+ +D+ +K P Y +A RG A + E A++ +
Sbjct: 493 SADDWFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYD 552
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ P EAW RG A LG +AI KA+E + + + RG F
Sbjct: 553 KTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRF 612
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ +++ ++ A+ Y G AL +G +++A ++ K I+ + AW +
Sbjct: 613 EEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGW 672
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q+L E+A+ +V+ +A++ RG+ L LG++++AI
Sbjct: 673 ALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAI 718
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D++++ P EA RG A E AI+ + + I+
Sbjct: 669 NRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFK 728
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG+ EAI K +EF+P+ + + RG+ F A+
Sbjct: 729 PDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIAS 788
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+ L +G +++A ++ KAI++ + EAW G L
Sbjct: 789 YEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELR 848
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F + L + +KA+E I + A++ RG L LG+ ++AI
Sbjct: 849 RFKEALTSCDKAIE-------IKADYHYAWNNRGWALRNLGRFEEAI 888
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G++ AI+ +D+ ++ EA RG A E AI+ + + I+ P
Sbjct: 602 RGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKP 661
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG+ EAI K +EF+P+ + + RG+ F A+
Sbjct: 662 DDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASY 721
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ A+ G AL ++G++++A ++ K I+ + EAW + +L
Sbjct: 722 EKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGR 781
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWNLT 624
+E+A+ ++ + I F +A+ RG++L LG+ ++A+ + P H WN
Sbjct: 782 NEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIE-IKPDDHEAWNNR 840
Query: 625 RW 626
W
Sbjct: 841 GW 842
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D++++ P EA RG A E AI+ + +AI+
Sbjct: 737 NRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIK 796
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG LG EA+ KA+E +P+ + + RG + + F A+
Sbjct: 797 PDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALTS 856
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLT 558
+++ + A+ G AL ++G +++A ++ KA+++ + EAW +L
Sbjct: 857 CDKAIEIKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLG 916
Query: 559 QFYQDLANSEKALE--------------------CLQQVLY-------IDKRFSKAYHLR 591
+F + LA+ +KA+E C ++ L ID ++ A++ +
Sbjct: 917 RFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNCYEEALISLDKAIEIDPNYTSAWYNQ 976
Query: 592 GLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
L+LH L +++++ K + P+ +W + RW
Sbjct: 977 ILVLHKLKRYEESAKSFYK-VIELNPNYLW-MRRW 1009
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
RN++ + K+ I D+ RG A + G++ A++ +D+ ++ P + EA
Sbjct: 509 RNEE-AIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYDKTIEIKPDHQEAWFN 567
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A E AI+ + +AI+ EAW RG A LG EAI KA+E +
Sbjct: 568 RGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKH 627
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG + F A+ ++ ++ A+ G AL ++G++++A ++
Sbjct: 628 DDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASY 687
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I+ + EAW + +L +E+A+ ++V+ A++ RG L LGQ
Sbjct: 688 DKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQ 747
Query: 601 HKKAI 605
++AI
Sbjct: 748 FEEAI 752
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ +D+ ++ EA RG A E AI+ + +AI+
Sbjct: 566 FNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEI 625
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
EAW RG A LG EAI K +EF+P+ + RG F A+
Sbjct: 626 KHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIA 685
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + A+ G+AL ++G ++A ++ K I+ + AW + Q+L
Sbjct: 686 SYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNL 745
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ +V+ +A++ RG+ L LG++++AI
Sbjct: 746 GQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAI 786
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 35/164 (21%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ N SA + W RG A LG + EAI KA++ +P+ ++RG
Sbjct: 488 IKINGSADD-WFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGN---------- 536
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AL +G++++A ++ K I++ + EAW +
Sbjct: 537 ------------------------ALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWAL 572
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L EKA+ + + I +A+ RG L LG+ ++AI
Sbjct: 573 RKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAI 616
>gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 442
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +G A+ +++ L+ +P Y EA R A QR+ AISD+T A+Q P
Sbjct: 111 RGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEP 170
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG+AR+A + +AI D S+A+ A L RG +K F+ A+ D
Sbjct: 171 GNARSFYERGEARSAKADWEQAINDYSEAVRLNSREALYLGARGFACYKTGRFDQALSDY 230
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++D + +Y L SS+G+ KA AI+L+ + +G L
Sbjct: 231 DEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGM 290
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ALE Q++ +D + + Y R + G+ KKA+ D
Sbjct: 291 LDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDD 331
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G++ A+ + ++++ +P +A RG A A + LE A+ D+ A++ N
Sbjct: 76 TRGLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R A + EAI D + A++FEP +A +ERG D+ A+ D
Sbjct: 136 PKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAIND 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V+L+ G A G + +A + +AI++D N +++ + L
Sbjct: 196 YSEAVRLNSREALYLGARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+KAL + ++ ++ Y RG + LG +A++D
Sbjct: 256 QLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGMLDQALED 297
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---------------------- 431
+G Y +IS ++ L+ +P Y EA RG A A + EL
Sbjct: 18 DGNYDLSISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSRAYSTR 77
Query: 432 ----------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
+ A+ D+ E ++ P +A++ RG+A AA G +A+QD ++ALE P
Sbjct: 78 GLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPK 137
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ +R F + FN A+ D + V+ + N ++ G A S+ ++++A +
Sbjct: 138 YAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYS 197
Query: 542 KAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L+ +L A G ++AL + + ID K+YH R L+ L
Sbjct: 198 EAVRLNSREALYLGARGFAC---YKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSL 254
Query: 599 GQHKKAIKDLSSGSR 613
GQ KA+ + R
Sbjct: 255 GQLDKALMNFDVAIR 269
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ + + AI+ + + ++ + L RG A + A+SD+ EAI+ +
Sbjct: 179 RGEARSAKADWEQAINDYSEAVRLNSREALYLGARGFACYKTGRFDQALSDYDEAIRIDA 238
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +++ R ++LG+ +A+ + A+ A + RG + K + A+ED
Sbjct: 239 NHYKSYHGRALIFSSLGQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGMLDQALEDY 298
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+KLD +N Y + GE+KKA + L+++ LD
Sbjct: 299 HQLIKLDPKNAMGYMARAAVHARKGEFKKALDDSLESVWLD 339
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ A+S +D+ ++ D + ++ GR + +L+ A+ +F AI+ N
Sbjct: 212 ARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLN 271
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + RG LG +A++D + ++ +P +A R V+ + +F A++D
Sbjct: 272 ATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDD 331
Query: 506 LSACVKLDK-----ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
V LD N A+ L SI ++A E KA L
Sbjct: 332 SLESVWLDPISVKTHNSLAWLLATCPLDSIRNGREAFEIAQKACDL 377
>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 517
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 117/231 (50%), Gaps = 4/231 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A+ YA AI+ ++Q +K +P +A RG + + EAAI D+ +A
Sbjct: 258 DIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQA 317
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP +K R AR+ LG++ AI+D ++A++ PN A + I + +
Sbjct: 318 IRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTN--- 374
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ + +KL+ + AY A +G+Y+ A +++ I+++ N+++A+ +
Sbjct: 375 -QQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNAR 433
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
DL + E A+ QV+ I+ + AY+ RG +G + +++D +
Sbjct: 434 YDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMGNKQGSLEDFQKAA 484
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +AA++++ +A++ +P + + +RG AR + + AI D ++A++ PN+A ++R
Sbjct: 238 DFDAALTNYNKALKLHPDDADIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNKR 297
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ +++ D+ AA++D + ++++ + A S +G+ + A E + +AI+++ N
Sbjct: 298 GLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPN 357
Query: 550 F--LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++ G ++++ L N +K + ++ ++ + AY R + LG ++ AI D
Sbjct: 358 YAIVDTNGSISRYL--LTNQQKFTKAIK----LNPHDAVAYKNRADARYDLGDYEGAIAD 411
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + ++V+F+ +R A+ G AI + Q +K +P Y A++ T + R L
Sbjct: 318 IRINPHVAVNFK-NRADARSQLGDNQGAIEDYTQAIKINPNY--AIVD--TNGSISRYLL 372
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
FT+AI+ NP A+K R AR LG+ AI D + ++ PN D + G
Sbjct: 373 TNQQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNA 432
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ D+ A+ + +K++ AY G A ++G + + E KA +
Sbjct: 433 RYDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMGNKQGSLEDFQKAADM 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 68/125 (54%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A G+ A+ + +KAL+ P+ ADI ++RG+ + D+ A+ D + +K++ N AY
Sbjct: 235 ARGDFDAALTNYNKALKLHPDDADIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAY 294
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL+ +G+Y+ A + + +AI+++ + + + L +++ A+E Q + I
Sbjct: 295 NKRGLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKI 354
Query: 581 DKRFS 585
+ ++
Sbjct: 355 NPNYA 359
>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
Length = 290
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+T + + S + +RG+A G++ AI+ F Q +K DP A R A Q
Sbjct: 66 SLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALA---Q 122
Query: 429 REL---EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R++ EAA +DF AIQ NP+ A+ R A G +A+ DL A+ P SA
Sbjct: 123 RQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDTAIRLNPESAQA 182
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
H RG+++ K D AV D + D + Y G +L ++G+Y KA E A+
Sbjct: 183 FHARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALN 242
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+D AW L Y+ N +KA E Q+ L +D +
Sbjct: 243 VDNKSALAWAWLGLAYEKNGNRQKAQESYQRALQLDPQ 280
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 420 GRGTARAFQRELEAA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
GRG A + +AA I TE I+ NPS+ EA+ RG A A +G EAI D ++A+
Sbjct: 46 GRGIAEIADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAI 105
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +PNSA R + + AA D ++++ + AY L + G +A
Sbjct: 106 KLDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQA 165
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
AI+L+ +A+ +Q ++ +A+ + D + Y RG L
Sbjct: 166 LSDLDTAIRLNPESAQAFHARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLV 225
Query: 597 GLGQHKKAIKDLSS 610
LG++ KA++D ++
Sbjct: 226 ALGKYDKAVEDFNA 239
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RGI D AA ++ + ++ + N S AY G+A + +G + +A +AI+
Sbjct: 47 RGIAEIADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIK 106
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD N A+ + + + +E A + ++ + AY R LL G +A+
Sbjct: 107 LDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQAL 166
Query: 606 KDLSSGSR 613
DL + R
Sbjct: 167 SDLDTAIR 174
>gi|427708152|ref|YP_007050529.1| hypothetical protein Nos7107_2781 [Nostoc sp. PCC 7107]
gi|427360657|gb|AFY43379.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 539
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G YA AI+ + Q ++ + + I RG A + AAI D+T+AI+ NP
Sbjct: 285 RGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIKRGLANYQLGDYIAAIDDYTQAIRLNP 344
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+K R AR+ LG++ AI+D ++AL+ PN A RG+ + F +
Sbjct: 345 NMAVAYKNRADARSHLGDNQGAIEDYTQALKINPNYAITYKNRGMSRY----FLGYQQSF 400
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ ++ AY G A + IG+Y+ A + + + I ++ + A+ + D+ +
Sbjct: 401 TKAIKINPQDAIAYKNRGNARADIGDYEGAIDDYTQVIAINPHDAHAYYNRGNARYDMGD 460
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A E Q + I+ ++ AY+ RG + +G ++AI D
Sbjct: 461 NAGAFEDYTQAIKINPNYADAYYNRGNVQSEIGDQQEAIADF 502
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F + RG+A G Y +AI + Q ++ +P A R AR+ + + AI D+T+A+
Sbjct: 315 FYIKRGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQAL 374
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ +K RG +R LG Q +KA++ P A RG D+ A
Sbjct: 375 KINPNYAITYKNRGMSRYFLGYQ----QSFTKAIKINPQDAIAYKNRGNARADIGDYEGA 430
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D + + ++ + AY G A +G+ A E + +AI+++ N+ +A+ +
Sbjct: 431 IDDYTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINPNYADAYYNRGNVQS 490
Query: 563 DLANSEKALECLQQVL 578
++ + ++A+ Q+ +
Sbjct: 491 EIGDQQEAIADFQKAV 506
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F + +K +P A RG ARA + E AI D+T+ I NP A+ RG AR +G
Sbjct: 400 FTKAIKINPQDAIAYKNRGNARADIGDYEGAIDDYTQVIAINPHDAHAYYNRGNARYDMG 459
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++ A +D ++A++ PN AD + RG V + D A+ D V+L
Sbjct: 460 DNAGAFEDYTQAIKINPNYADAYYNRGNVQSEIGDQQEAIADFQKAVEL 508
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI+ +++A++ + E + +RG + LG+ EAI D S+A++ N A +R
Sbjct: 260 EYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIKR 319
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ N++ D+ AA++D + ++L+ AY A S +G+ + A E + +A++++ N
Sbjct: 320 GLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKINPN 379
Query: 550 FLEAW----------GHLTQFYQ--------------------DLANSEKALECLQQVLY 579
+ + G+ F + D+ + E A++ QV+
Sbjct: 380 YAITYKNRGMSRYFLGYQQSFTKAIKINPQDAIAYKNRGNARADIGDYEGAIDDYTQVIA 439
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
I+ + AY+ RG + +G + A +D +
Sbjct: 440 INPHDAHAYYNRGNARYDMGDNAGAFEDYT 469
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
GE +AI S+AL+ N A+I ++RG+ ++ D+ A+ D S ++++ + Y
Sbjct: 259 GEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIK 318
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLA +G+Y A + + +AI+L+ N A+ + L +++ A+E Q L I+
Sbjct: 319 RGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKINP 378
Query: 583 RFSKAYHLRGLLLHGLGQHK---KAIK 606
++ Y RG+ + LG + KAIK
Sbjct: 379 NYAITYKNRGMSRYFLGYQQSFTKAIK 405
>gi|422301645|ref|ZP_16389012.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
gi|389789312|emb|CCI14645.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
Length = 642
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++ AI+ +DQ L+ P Y EA RG A L AI+ + +A++
Sbjct: 189 NRGIALDNLGRFEEAIASYDQALEFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG E I +ALE +P+ + + RG F A+
Sbjct: 249 PDKHEAWYNRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIAS 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G+AL ++G ++A ++ +A+++ +F AW + +L
Sbjct: 309 YDKALEIKPDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLG 368
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q L I F A+ RG L LG+ +AI
Sbjct: 369 RLEEAIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAI 408
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF L+ RG+A N G+ AI+ +DQ LK P + A RG A
Sbjct: 339 AIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAWTNRGAAL 398
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
AI+ A+ P +AW RG A LG E I +ALEF+P+ +
Sbjct: 399 VNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYDRALEFKPDYHEA 458
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + + +++ ++ A+ G+AL+++G +++A ++ + ++
Sbjct: 459 WYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNRGIALANLGRFEQAIASYDRVLE 518
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F AW +L E+AL Q L I F A+ RG L LG+ +AI
Sbjct: 519 IKPDFHPAWSDRGIVLDNLGRFEEALASCDQALAIKPDFHLAWTNRGAALVNLGRWAEAI 578
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +G + G + AI+ +DQ L+ P EA RG A E AI+ + +A+
Sbjct: 152 FWFEQGYQKYTNGDFIGAIASYDQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQAL 211
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P EAW RG A LG EAI KALE +P+ + + RG F
Sbjct: 212 EFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRFAEE 271
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ +++ + A+ G AL ++G +++A ++ KA+++ + AW +
Sbjct: 272 IASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALG 331
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLI 620
+L E+A+ Q L I F A+ RG+ L LG+ ++AI + + P HL
Sbjct: 332 NLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALK-IQPDFHLA 390
Query: 621 W--------NLTRW 626
W NL RW
Sbjct: 391 WTNRGAALVNLGRW 404
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 14/271 (5%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D L+ RG+A N G+ AI+ +DQ L+ P + A RG A
Sbjct: 305 AIASYDKALEIKPDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVAL 364
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE AI+ + +A++ P AW RG A LG EAI +AL +P+
Sbjct: 365 GNLGRLEEAIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQA 424
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + + ++ + A+ G+AL+++G + + ++ KA++
Sbjct: 425 WTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALE 484
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + AW + +L E+A+ +VL I F A+ RG++L LG+ ++A+
Sbjct: 485 IKPDDHLAWYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEAL 544
Query: 606 KDLSSGSRTMMP--HLIW--------NLTRW 626
+ + P HL W NL RW
Sbjct: 545 ASCDQ-ALAIKPDFHLAWTNRGAALVNLGRW 574
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF L+ RG A VN G++A AI+ D+ L P +A RG A
Sbjct: 373 AIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAAL 432
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
I+ + A++ P EAW RG A A LG E I KALE +P+
Sbjct: 433 VNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDDHLA 492
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ +++ + A++ G+ L ++G +++A + +A+
Sbjct: 493 WYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALASCDQALA 552
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F AW + +L +A+ + L I +A+ RG L LG+ +AI
Sbjct: 553 IKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEAI 612
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ A AI+ +D+ L+ P EA RG A I+ + A++
Sbjct: 223 NRGIALDNLGRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRFAEEIASYGRALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI KALE +P+ + RG+ A+
Sbjct: 283 PDKHEAWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALGNLGRLEEAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+T G+AL ++G ++A ++ +A+++ +F AW + +L
Sbjct: 343 YDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAWTNRGAALVNLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L I +A+ RG L LG+ + I
Sbjct: 403 RWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEI 442
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN G++A I+ +D+ L+ P Y EA RG A A I+ + +A++
Sbjct: 427 NRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIK 486
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A A LG +AI + LE +P+ +RGIV F A+
Sbjct: 487 PDDHLAWYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALAS 546
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + A+T G AL ++G + +A + +A+ + + +AW + +L
Sbjct: 547 CDQALAIKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 606
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+ + L I + +A+ R L LG+
Sbjct: 607 RWAEAIASCDRALEIKPDYHEAWTNRENALRNLGR 641
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++A I+ + + L+ P EA RG A E AI+ + +A++
Sbjct: 257 NRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI +ALE +P+ RG+ A+
Sbjct: 317 PDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+T G AL ++G + +A + +A+ + + +AW + +L
Sbjct: 377 YDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 436
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + L + +A++ RG+ L LG+ + I
Sbjct: 437 RWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEI 476
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
L + + I D+ +++ A T R A L +L W++AI D LA ++ Q
Sbjct: 367 LGRLEEAIASYDQALKIQPDFHLAWTNRG--AALVNLGRWAEAIASCDRALAIKPDLHQA 424
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L I D+AL+ P +A+ +G A + LGR E ++ ++K E
Sbjct: 425 WTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALE 484
>gi|425463465|ref|ZP_18842804.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
gi|389832747|emb|CCI23369.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
Length = 308
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A GKY A++ + Q+++ +P Y +A RG A +E + AI+D+T+A
Sbjct: 3 DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ +P+ +A+ RG LGES +AI D ++AL +PN D RGIV+ + +
Sbjct: 63 LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ D + ++L+ + AY G + +Y+KA + +AI+L+ N + G
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIG 176
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A RG A + + A++D+T+ I+ NP+ +A+ RG A L ES +AI D ++A
Sbjct: 3 DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +PN D RGIV+ + + A+ D + + LD AY G+ + +GE ++
Sbjct: 63 LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A + +AI+L+ +A+ Y L +KAL +Q +
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAI 165
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A+ RG A LG+ +A+ D ++ + PN AD RG+ + K+ A+ D +
Sbjct: 3 DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ LD AY G+ + +GE ++A + +A+ LD N ++A+ + + L S++
Sbjct: 63 LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
A+ + + ++ + + AY+ RG + L +++KA+ D R + P+L
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIR-LNPNL 171
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + D +RG+A + AI+ + Q L DP +A RG E
Sbjct: 26 TQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQALSLDPNLVDAYFNRGIVHNRLGE 85
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+T+A+ +P+ +A+ RG LGES +AI D ++A+ P AD ++RG
Sbjct: 86 SQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTEAIRLNPKLADAYNKRG 145
Query: 491 IVNFKFKDFNAAVEDLSACVKLD 513
+ K + A+ D ++L+
Sbjct: 146 DTYYWLKKYQKALTDYEQAIRLN 168
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD RG+ + + A+ D + ++L+ AY GLA + + E +KA + +
Sbjct: 2 ADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQ 61
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+ LD N ++A+ + + L S++A+ Q L +D AY RG++ + LG+ +
Sbjct: 62 ALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQ 121
Query: 603 KAIKDLSSGSR 613
+AI D + R
Sbjct: 122 QAIADYTEAIR 132
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L ++++ IR L+ A +Y NR Y++L+ + I D +AL LDP L+ AY
Sbjct: 21 ALADYTQVIR-LNPNYADAY-----FNRGLAYNRLKESQKAIADYTQALSLDPNLVDAYF 74
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
+G + LG ++A+ AD Q L L+ L A +R +
Sbjct: 75 NRGIVHNRLGESQQAI--------------ADYTQALSLDPNLVDAYFNRGIV 113
>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 261
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++G Y AI +D+ L+ DP P A +GTA QR E AI F E I+
Sbjct: 28 LERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRI 87
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P AW +G A LGE EAI L +A+ EP + I +G + +++ A+
Sbjct: 88 DPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALT 147
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++L+ ++ A++ L G+Y++A A + I+L ++ AW + + L
Sbjct: 148 AIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRL 207
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++LE L + + +D + A++ RG L G+ ++A
Sbjct: 208 ERYDESLEALDRAIQLDSDLADAWYNRGEALKAQGRDEEA 247
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG Q + E AI + EA++ +P AW +G A EAIQ +
Sbjct: 25 EEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEV 84
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P A +G + +++ A+ L + L+ EN S ++ G AL GEY +
Sbjct: 85 IRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDE 144
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A +AI+L+ + AW + + ++A+ + +V+ + + A+ RG LL
Sbjct: 145 ALTAIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELL 204
Query: 596 HGLGQHKKAIKDL 608
L ++ ++++ L
Sbjct: 205 WRLERYDESLEAL 217
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI DQ + +P +G+A FQ E + A++ EAI+ P + AW
Sbjct: 106 GEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALTAIEEAIRLEPDSTIAWSL 165
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ G+ EAI + + + P+ RG + ++ + ++ ++E L ++LD
Sbjct: 166 KADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDS 225
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ A+ G AL + G ++A+ A+ +A +L
Sbjct: 226 DLADAWYNRGEALKAQGRDEEADVAYTRAKEL 257
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
ERG F D+ A+E ++LD EN A++ G AL + Y++A +A + I++D
Sbjct: 29 ERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRID 88
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AW + +L ++A+ L Q + ++ + L+G L+ G++ +A+
Sbjct: 89 PELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALTA 148
Query: 608 LSSGSR 613
+ R
Sbjct: 149 IEEAIR 154
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+EN + G L S G+Y++A EA+ +A++LD AW + + E+A++
Sbjct: 21 QENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQA 80
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+V+ ID + A+ +G LH LG++ +AI
Sbjct: 81 FDEVIRIDPELASAWSYKGGALHELGEYDEAI 112
>gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
sp. PCC 6506]
gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
sp. PCC 6506]
Length = 735
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 34/280 (12%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K + D RG+A Y AI F Q+++ P +A RG ARA +
Sbjct: 431 TQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGAD 490
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---- 486
L+ A+ D+TEAI+ PS +A+ RG+AR LG+ A+ D S+ + + S D
Sbjct: 491 LQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRC 550
Query: 487 ------------------------------HERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ R I KD+ A++D S +K++ +N
Sbjct: 551 STQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIKVNPKN 610
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SAY+ GLA S+ G+ + A + AI L+ N EA+ + + + DL N E AL Q
Sbjct: 611 DSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKIHYDLKNYEDALADYVQ 670
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
+ ++ F+ AY RG + LG AI D + +
Sbjct: 671 AIRLNPNFAAAYVGRGNVRRILGDKPGAISDFEKAGKLYL 710
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ + G A AI+ F++ ++ +P E R A + EAAI+D+T+AI
Sbjct: 343 FDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAAIADYTQAIAL 402
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ +A+ RG R + + AI+D ++ L+ +PN D +ERG+ F +D+ A++
Sbjct: 403 DPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIK 462
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L A+ G+A ++ + + A + +AI+L+ + ++A+ + L
Sbjct: 463 DFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHL 522
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + AL QV+ ID + AY R LG H+ AI D
Sbjct: 523 GDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDD 565
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI+ + Q + DP Y +A RG R ++L AI D+T+ ++ P+ +A+ RG
Sbjct: 389 YEAAIADYTQAIALDPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERG 448
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L + AI+D ++ + +P+ A H RG+ D A+ D + ++L+ N
Sbjct: 449 LAYFGLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSN 508
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G A +G+YK A + + I++D ++A+ + +L + A++ Q
Sbjct: 509 VDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQ 568
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++ + S Y+ R + L ++KAI D S
Sbjct: 569 AIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCS 601
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + AI + Q+LK P P+A RG A ++ AI DFT+ I+
Sbjct: 411 FNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRL 470
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS +A RG ARAA + A+ D ++A+ EP++ D + RG F D+ A+
Sbjct: 471 QPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALA 530
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S +++D ++ AY ++G ++ A + +AI L+ + + Y +L
Sbjct: 531 DYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNL 590
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ +KA++ Q + ++ + AY RGL G + A+ D ++
Sbjct: 591 KDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDREGAVADYTA 636
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P+ + RG ++ + AI+ F ++IQ NP + E + +R A L A
Sbjct: 333 RPNPVKAKEYFDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAA 392
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D ++A+ +PN RG+ F+ KD A+ED + +KL + AY GLA
Sbjct: 393 IADYTQAIALDPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYF 452
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +Y A + + I+L + +A A+ + A+ + + ++ AY
Sbjct: 453 GLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAY 512
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
+ RG LG +K A+ D S
Sbjct: 513 YSRGRARFHLGDYKGALADYS 533
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD SRG A+ + G Y A++ + Q+++ D +A R + + +AAI D T
Sbjct: 508 NVDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCT 567
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI N + R A L + +AI D S+A++ P + RG+ + D
Sbjct: 568 QAIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDR 627
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AV D +A + L+ + AY+ + Y+ A +++AI+L+ NF A+
Sbjct: 628 EGAVADYTAAIGLNPNDYEAYSNRAKIHYDLKNYEDALADYVQAIRLNPNFAAAYVGRGN 687
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
+ L + A+ ++ LY+D+ S Y
Sbjct: 688 VRRILGDKPGAISDFEKAGKLYLDQGRSGGY 718
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIEL-----AKLCSLRNWSKAIRILDSLL 63
+R+ L + + +++R+DS A R A ++ + ++AI L+S
Sbjct: 518 ARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAI-ALNSQD 576
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ Y NR Y L+ ++ I DC +A++++P AY +G A SA G +E A+
Sbjct: 577 SVPYN-----NRCIAYLNLKDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDREGAV 631
Query: 124 SVW 126
+ +
Sbjct: 632 ADY 634
>gi|428307503|ref|YP_007144328.1| hypothetical protein Cri9333_4011 [Crinalium epipsammum PCC 9333]
gi|428249038|gb|AFZ14818.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 1095
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N +Y A++ F Q + +P Y A RG +E + AI+D+T AI+
Sbjct: 843 NRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQ 902
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +A+ D + A+ +P+ AD + RG +++ A+ D
Sbjct: 903 PDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIAD 962
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L ++ AY G+ ++ EY+KA + +AI L N +A+ + Y +L
Sbjct: 963 YNRAIALQPDDTEAYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQ 1022
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+KA+ + + + +KAY RGL L +++KA DL ++
Sbjct: 1023 EYQKAIADYNRAIALQPDDAKAYGNRGLTYSKLQEYQKAFADLQKAAQ 1070
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 116/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y A++ +++ +K P Y + RG + +E + A++++ AI
Sbjct: 673 NRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFYLQEYQKALAEYNRAIALQ 732
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG L E +A+ D ++A+E +P+ A++ + RG +++ A+ D
Sbjct: 733 LDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALAD 792
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY+ G S+ EY+KA + +AI L + +A+ + Y +L
Sbjct: 793 YTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQ 852
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KAL Q + ++ ++ AY+ RGL L +++KAI D +
Sbjct: 853 EYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYT 896
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ +++ ++ P E RG +E + A++D+T AI+
Sbjct: 741 NRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQ 800
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG +L E +A+ D ++A+ +P+ A + RG+ +++ A+ D
Sbjct: 801 PDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALAD 860
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + SAY GL ++ EY+KA + +AI+L + +A+ Y +L
Sbjct: 861 FTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQ 920
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KAL + + + AY+ RG L +++KAI D +
Sbjct: 921 EYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYN 964
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 380 SVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + IA N G +Y A++ + + + P +A RG +E +
Sbjct: 796 AIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQ 855
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT+AI P A+ RG L E +AI D ++A+E +P+ AD + RG+
Sbjct: 856 KALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVT 915
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ +++ A+ D ++ + L + AY G + EY+KA + +AI L + E
Sbjct: 916 YYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTE 975
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y +L +KAL + + + + AY RGL L +++KAI D +
Sbjct: 976 AYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQEYQKAIADYN 1032
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 111/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ + + ++ P A RG +E + A++D+T AI
Sbjct: 775 NRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALK 834
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +A+ D ++A+ EP+ A + RG+ +++ A+ D
Sbjct: 835 PDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIAD 894
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY G+ ++ EY+KA + AI L + +A+ + Y DL
Sbjct: 895 YTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQ 954
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+KA+ + + + ++AY+ RG+ + L +++KA+ D +
Sbjct: 955 EYQKAIADYNRAIALQPDDTEAYYNRGITYYNLQEYQKALADYN 998
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ +Y A++ +++ + +A RG +E + A++D+ A
Sbjct: 703 DGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRA 762
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P E + RG L E +A+ D ++A+E +P+ A RG +++
Sbjct: 763 IELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQK 822
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + + L ++ AY G+ ++ EY+KA +AI L+ ++ A+ + Y
Sbjct: 823 ALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTY 882
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+L +KA+ + + + + AY+ RG+ + L +++KA+ D +S + + P L
Sbjct: 883 DNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTS-AIALQPDL 939
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ N +Y A++ + + P +A RG +E + AI+D+ AI
Sbjct: 911 SRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQ 970
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG L E +A+ D ++A+ +PN AD RG+ F +++ A+ D
Sbjct: 971 PDDTEAYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQEYQKAIAD 1030
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L ++ AY GL S + EY+KA KA QL F E G + Q YQ++
Sbjct: 1031 YNRAIALQPDDAKAYGNRGLTYSKLQEYQKAFADLQKAAQL---FYEQ-GDM-QMYQEVQ 1085
Query: 566 NSEKALEC 573
+ K L+
Sbjct: 1086 EAIKELQS 1093
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 400 AISIFD---QILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
A++ FD QI++ P Y +A G+G + + A+ +A Q +P +A
Sbjct: 544 ALAAFDKAIQIIQHQPNFSKQYYAQAYYGKGLTLYWMEKYSEAVDALKQATQIDPKFHQA 603
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W+ RG A +L + EA+ +A++ P + E G + + A+ S +K
Sbjct: 604 WRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVELGNTFSNLERYQDAIVAYSDAIK 663
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEK 569
+ K++ AY GL S+ EY+KA + +AI+L ++ + + + +T FY L +K
Sbjct: 664 I-KQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFY--LQEYQK 720
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL + + + +KAY+ RG L +++KA+ D +
Sbjct: 721 ALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYN 760
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 33/247 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA------- 448
KY+ A+ Q + DP + +A RG A ++ A++ + +AI+ +P
Sbjct: 582 KYSEAVDALKQATQIDPKFHQAWRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVEL 641
Query: 449 GE--------------------------AWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
G A+ RG +L E +A+ D ++A++ +P+
Sbjct: 642 GNTFSNLERYQDAIVAYSDAIKIKQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDY 701
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RG+ F +++ A+ + + + L +N AY G ++ EY+KA + +
Sbjct: 702 ADGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNR 761
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+L + E + + Y +L +KAL + + + + AY RG L +++
Sbjct: 762 AIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQ 821
Query: 603 KAIKDLS 609
KA+ D +
Sbjct: 822 KALADYT 828
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI + +K +P A RG +E + A++D+ AI+ P + + R
Sbjct: 650 RYQDAIVAYSDAIKIK-QHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNR 708
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +A+ + ++A+ + ++A + RG +++ A+ D + ++L +
Sbjct: 709 GVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPD 768
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G ++ EY+KA + +AI+L + A+ + Y+ L +KAL
Sbjct: 769 LAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYT 828
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + +KAY+ RG+ L +++KA+ D +
Sbjct: 829 RAIALKPDDAKAYYNRGVTYGNLQEYQKALADFT 862
>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 1104
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + +AIS F + D + EA RG A E E AI+DF++AI N
Sbjct: 76 NRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAISLN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A G +AI+D ++A E +P+ ++ L RGI + F AV D
Sbjct: 136 PSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVAD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ E GLA +G+ + A +L+ ++ + ++ EA +L Y L
Sbjct: 196 YTRALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E AL+ + + I+ F +AY+ RG+L + +G+ +AI + S
Sbjct: 256 LLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFDEAIAEFS 299
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 149/639 (23%), Positives = 253/639 (39%), Gaps = 88/639 (13%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQSY 67
LN+ I + V +D+ A R +E A++ ++ ++SKAI L+ A +Y
Sbjct: 84 LNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAIS-LNPSYAAAY 142
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGR--------- 118
NR +++ +H+ I D +A +LDP+ +A +G FS LG
Sbjct: 143 N-----NRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYT 197
Query: 119 ------KEEALSVWEKGYEHA-LHQS-ADLKQFLE-LEELLTAAKQDRSVTCEYDVSNSM 169
E+A ++ +G + L QS A + +L+ LE+ + A+ ++ EY
Sbjct: 198 RALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEY------ 251
Query: 170 SSLTVSESGLNANDKMSETS----ENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
S L + E+ L+ K E + E +N + + D E ++ S ++ S
Sbjct: 252 SHLGLLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFD--EAIAEFSRALEII---S 306
Query: 226 DEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRD-----------ASEIN 274
+E + + P ++ L + G + ++T + EIN
Sbjct: 307 EETQAEAVTPQPEASLSGMAAETAPGQGAPGGEEKGETTIPPVEELVEDPAIRQLTDEIN 366
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
R S DD ++ N + R G+ D + D + Y + +
Sbjct: 367 R-SPDDPELYN---RRGVEYSRLGQSEKAIEDFTRAIDIDPGYIEAYFNRGNEYDRLGMV 422
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
D +D T + K N KF + +RGI
Sbjct: 423 DEAIADYTHA-----------------LKINPKFA------------EACFARGIEYQKA 453
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
AIS F + L+ P YP+AL RG A + A+ DF+ A++ EA
Sbjct: 454 NLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVA 513
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R + + G S A +DL+ AL EP SA + RGI + A+ D S + ++
Sbjct: 514 RAEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEP 573
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N AY L L G ++++ + I+L +A+ + +L NS +A+
Sbjct: 574 SNADAYFQRALILQKQGRFEESASDISRVIELRPADAQAYLFRGRQNSELGNSSEAIADF 633
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ L ID R AY RG GQ +KA++D S+ R
Sbjct: 634 SRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIR 672
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
D A G G HD + SA++ + SE++ ++
Sbjct: 35 DDAEAYHNRGVAKAGKHDYPGAIEDYSAAIRINPHFSEAFYNRGVA-------------- 80
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFD 405
+ +L N ++ + + ++ DF +RG+ G+Y AI+ F
Sbjct: 81 ---YSLLNRPEN--------AISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFS 129
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ + +P Y A RG A + E AI D+T A + +PS EA RG + LG
Sbjct: 130 KAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHF 189
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+A+ D ++ALE P ADIL+ RG+ K AA+ D C++ + A+ LG+
Sbjct: 190 EDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGV 249
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEKALECLQQ 576
S +G + A + + KAI+++ +F+EA+ + + +F + +A +ALE + +
Sbjct: 250 EYSHLGLLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFDEAIAEFSRALEIISE 307
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +G + AI+ + + ++ +P EA RG A+A + + AI D++ AI+ N
Sbjct: 8 NRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAAIRIN 67
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + L AI D + A+ + + + + RG+ + ++ A+ D
Sbjct: 68 PHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIAD 127
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ +AY G+ + G ++KA E + +A +LD +F EA + + L
Sbjct: 128 FSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLG 187
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ E A+ + L I + + RGL LGQ + AI D
Sbjct: 188 HFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIAD 229
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I +D ++RG +G + AI+ F ++++ +P A RG +
Sbjct: 736 SKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSRVIEINPGNAVAFYNRGIEYGERGM 795
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI D +A+ P EA+ RG A G EAI D ++ALE P++ + RG
Sbjct: 796 LDEAIMDLGKAVMLRPDLAEAYYNRGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRG 855
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ ++ A+ED S ++++ +N +AY G+ G +KA E +AI + +
Sbjct: 856 NAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPDL 915
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + YQ + E+A+ + + I KAY+ RG LG + +A+ D S
Sbjct: 916 AEAYYNRGVAYQRVERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSDFS 974
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 8/266 (3%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V I+ +++ +RGI G AI + + P EA RG A +
Sbjct: 772 VIEINPGNAVAF---YNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYYNRGVAYHKKG 828
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
LE AI+D+ A++ +P +A+ RG A AALG EAI+D S+A+E P++ + R
Sbjct: 829 MLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNR 888
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI K A+ED S + + + AY G+A + Y++A + +AIQ+
Sbjct: 889 GIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIADYSRAIQISPA 948
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + + L +A+ + + I+ AY+ RG+ G +AI D S
Sbjct: 949 NEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIADFS 1008
Query: 610 S--GSRTMMPHLIWNLTRW---RNLC 630
G R + +N+ RN+C
Sbjct: 1009 KAVGLRPDLAEAYYNMGNIYYNRNMC 1034
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG A + + AI+D+T AI+ NP EA+ RG A+A + AI+D S A
Sbjct: 4 EIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAA 63
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ P+ ++ + RG+ A+ D ++ V LD + AY GL + IGEY+
Sbjct: 64 IRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYEL 123
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI L+ ++ A+ + + EKA+E + +D FS+A RG+
Sbjct: 124 AIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEF 183
Query: 596 HGLGQHKKAIKDLS 609
LG + A+ D +
Sbjct: 184 SRLGHFEDAVADYT 197
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+ S + RGI Q GK A++ F + + +P +A R Q E + S
Sbjct: 538 EPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEPSNADAYFQRALILQKQGRFEESAS 597
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D + I+ P+ +A+ RG+ + LG S EAI D S+ALE +P D RG +
Sbjct: 598 DISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRC 657
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEA 553
AVED S ++L+ + A T S +G Y+ A E +A++ D + L A
Sbjct: 658 GQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSILLA 717
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G L Y+ L ++A+ +V+ ID KAY RG LL G G +AI D S
Sbjct: 718 RGLL---YERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFS 770
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI F + ++ +P P A RG + +E A+ DF+ AI
Sbjct: 853 NRGNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIK 912
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + EAI D S+A++ P + + RG + +N AV D
Sbjct: 913 PDLAEAYYNRGVAYQRVERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSD 972
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ +N +AY G+ G + +A KA+ L + EA+ ++ Y +
Sbjct: 973 FSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRN 1032
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L + +++A+ + L L ++AI
Sbjct: 1033 MCREAIREFDRALGVKPGYARAFLNKALAYEKLSMTEEAI 1072
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
++R+ + + L RG G + AI+ F + L+ DP +A IGRG R+
Sbjct: 599 ISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRCG 658
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ D++ AI+ N + EA R + LG +A++DLS+ALE P IL R
Sbjct: 659 QPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSILLAR 718
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G++ + + A+ D S +++D ++ AY G L+ G +A + I+++
Sbjct: 719 GLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSRVIEINPG 778
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y + ++A+ L + + + ++AY+ RG+ H G ++AI D +
Sbjct: 779 NAVAFYNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYYNRGVAYHKKGMLEEAIADYN 838
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
GE + RG A G EAI D ++A+E P+ A+ H RG+ D+ A+ED SA
Sbjct: 3 GEIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSA 62
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++++ A+ G+A S + + A A+ LD +F+EA+ + Y + E
Sbjct: 63 AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYE 122
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + ++ ++ AY+ RG++ G H+KAI+D +
Sbjct: 123 LAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYT 163
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +G A+ F + + P EA RG A E AI+D++ AIQ +
Sbjct: 887 NRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIADYSRAIQIS 946
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG A AALG EA+ D S+A+E P++ + RGI K F+ A+ D
Sbjct: 947 PANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIAD 1006
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V L + AY +G + ++A +A+ + + A+ + Y+ L+
Sbjct: 1007 FSKAVGLRPDLAEAYYNMGNIYYNRNMCREAIREFDRALGVKPGYARAFLNKALAYEKLS 1066
Query: 566 NSEKALECLQQVLYIDKRFSK 586
+E+A+ + L + SK
Sbjct: 1067 MTEEAIAAYEGFLKFARNESK 1087
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 7/297 (2%)
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV--- 381
+E YS+ +S+ + D T + + + E R+ K SK+I +
Sbjct: 515 AEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEPS 574
Query: 382 --DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D R + +G++ + S ++++ P +A + RG + AI+DF+
Sbjct: 575 NADAYFQRALILQKQGRFEESASDISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFS 634
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ +P +A+ RGQ R+ G+ +A++D S A+ S + L R + +
Sbjct: 635 RALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRY 694
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AVEDLS ++ + S GL +G +A + K I++D +A+ +
Sbjct: 695 EDAVEDLSRALEQAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGN 754
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
S +A+ +V+ I+ + A++ RG+ G +AI DL G M+
Sbjct: 755 LLAGKGLSSEAIADFSRVIEINPGNAVAFYNRGIEYGERGMLDEAIMDL--GKAVML 809
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++S+AI I L A++Y NR Y ++E ++ I D +A+Q+ P +AY
Sbjct: 901 AMEDFSRAIAIKPDL-AEAY-----YNRGVAYQRVERYEEAIADYSRAIQISPANEKAYN 954
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A +ALG EA+S + + E
Sbjct: 955 NRGNAHAALGMYNEAVSDFSRAIE 978
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++SKA+ + L Y + +I NR C + IR+ D+AL + P +A+
Sbjct: 1003 AIADFSKAVGLRPDLAEAYYNMGNIYYNRNMC-------REAIREFDRALGVKPGYARAF 1055
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFL 144
+ K A+ L EEA++ +E + A ++S +L F+
Sbjct: 1056 LNKALAYEKLSMTEEAIAAYEGFLKFARNESKELVDFV 1093
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY-E 68
R R + K + + +R++ A+TAR + L + A+ L L Q+ +
Sbjct: 654 RSRCGQPEKAVEDYSNAIRLNGRSVEALTARA--TEYSRLGRYEDAVEDLSRALEQAPGD 711
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + R Y +L + I D K +++DP +AYI +G + G EA++ + +
Sbjct: 712 VSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSR 771
>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 649
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ A++ ++Q ++ +P Y +A RG Q + + A++D +AIQ NP +A+K R
Sbjct: 305 EFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNR 364
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G G+ A+ D ++A++ P A+ + RG+V ++ A+ + + ++L+ +
Sbjct: 365 GNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPK 424
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G+ G+Y A + +AIQL+ + EA+ + Y + + A+
Sbjct: 425 YAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYN 484
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFN 632
Q + ++ + ++AY+ RG + G++ A+ D + R P L W R L +N
Sbjct: 485 QAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQL-WLPYNNRGLVYN 540
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 337 KSSDSTESRSKLSF---KWDMLKETSNEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQV 392
K +D+ ++R + + K+D+ N+A + N K+ + +RG+
Sbjct: 356 KYADAYKNRGNVYYNQGKYDLALADYNQAIQLNPKYA------------EAYNNRGLVYD 403
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
++GKY AI+ F+Q ++ +P Y A RG Q + + A++D+ +AIQ NP EA+
Sbjct: 404 DQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAY 463
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG G+ AI D ++A++ P A+ + RG V K ++ A+ D + ++L
Sbjct: 464 NNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRL 523
Query: 513 DKENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ Y GL + +Y A + +AIQL+ A+ + Y D + A+
Sbjct: 524 NNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQGKYDLAI 583
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q + ++ +++ AY+ RGL +KAI D
Sbjct: 584 ADYSQAIQLNPKYANAYYTRGLTNKDQRNMEKAISDF 620
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +GKY A++ +Q ++ +P Y +A RG Q + + A++D+ +AIQ N
Sbjct: 329 NRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLN 388
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG G+ AI + ++A++ P A + RG+V ++ A+ D
Sbjct: 389 PKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALAD 448
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G G+Y A + +AIQL+ EA+ + Y+
Sbjct: 449 YNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQG 508
Query: 566 NSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AL + + + + + Y+ RGL+ + ++ A+ D S
Sbjct: 509 KYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYS 553
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG +GKY A++ +++ ++ +P RG QR+ + A++D+++AIQ
Sbjct: 499 NRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQL 558
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG G+ AI D S+A++ P A+ + RG+ N ++ A+
Sbjct: 559 NPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYANAYYTRGLTNKDQRNMEKAIS 618
Query: 505 DLSACVKLDKE 515
D L K+
Sbjct: 619 DFEKAADLYKQ 629
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 66/128 (51%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A+ +E+G + ++F A+ D + ++L+ + AY G+ G+Y A
Sbjct: 289 NAESYYEQGDKHHDREEFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLN 348
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AIQL+ + +A+ + Y + + AL Q + ++ ++++AY+ RGL+ G++
Sbjct: 349 QAIQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKY 408
Query: 602 KKAIKDLS 609
AI + +
Sbjct: 409 DLAIAEFN 416
>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
Length = 412
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +D +LKE+ Y EA G+G A + AI + +A++ +P EAW
Sbjct: 181 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 240
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + ++ A+ ++++
Sbjct: 241 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 300
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + + +A EA+ KA+QLD +LEA+ L L E+AL+
Sbjct: 301 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 360
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ L +D + ++ + + L LG+ ++A
Sbjct: 361 EKALKLDPEAADSWFGKAVCLSYLGREEEA 390
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GIA G Y AI +D+ L+ DP + EA +G + A+ + +A++ +
Sbjct: 206 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G L EAI KA+E ++D+ + +G + + F+ AVE
Sbjct: 266 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+LD E AY+ LG L+ + +++A + + KA++LD ++W L
Sbjct: 326 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 385
Query: 566 NSEKALECLQQVLYIDKRFSK 586
E+A + ++ + ID R+++
Sbjct: 386 REEEAEDAYRKAVEIDPRYAE 406
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ + + L P YP A G+ + E A+ + ++ N + EAW
Sbjct: 147 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 206
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A +G EAI KALE +P + + +G+ F A++ V++D
Sbjct: 207 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 266
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ +G+ L ++ Y +A A KAI+++ + W + + ++A+E
Sbjct: 267 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 326
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +D + +AY G +L L + ++A+
Sbjct: 327 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEAL 357
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI F++ + +DP L + A E A+ + EA++ N + W
Sbjct: 79 GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 138
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +GE +A++ KAL+ +P+ + + + + + + AV+ +K +
Sbjct: 139 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENS 198
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
K A+ G+AL +G Y +A A+ KA+++D FLEAW + L + ++AL+
Sbjct: 199 NYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAY 258
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + ID A++ G+ L L ++ +AI
Sbjct: 259 EKAVEIDPENDDAWNNMGIDLENLERYDEAI 289
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI + + + E D+ N+ F SQ++ + KA+QLDP L+
Sbjct: 279 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 338
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
AY G + L R EEAL ++EK
Sbjct: 339 AYSSLGFVLAQLKRFEEALDIYEK 362
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K ++ I ++ + D + + A L SL + +A+++ + + E D
Sbjct: 77 RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 134
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL L P A+ K S GR EEA+ Y
Sbjct: 135 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 190
Query: 131 EHALHQSADLKQ 142
+ L ++++ K+
Sbjct: 191 DIVLKENSNYKE 202
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ Q+ + I DKAL++DP L+A+ KG +LG ++AL +EK E
Sbjct: 205 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 263
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++G ++ A+ + + ++ DP Y EA G A + E A+ + +A
Sbjct: 304 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 363
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ +P A ++W + + LG EA KA+E +P A+I
Sbjct: 364 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 407
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 58/120 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ + +N A+ + D N AL S+G +++A + + +A++
Sbjct: 68 LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 127
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ Y + EKA+E + L + + A++ + L L G++++A+
Sbjct: 128 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 187
>gi|313204456|ref|YP_004043113.1| hypothetical protein Palpr_1991 [Paludibacter propionicigenes WB4]
gi|312443772|gb|ADQ80128.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 301
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 33/266 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S +F +G+ N Y +AI F + ++ +P +A + RG A+ + ++ I D
Sbjct: 20 SANFYFDKGVTAYNNRDYKTAIENFTRSIQINPRNIKAYVSRGIAKYYIQDYIGGIEDQH 79
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP+ G+A+ G L + AI++ SKA+E P RG DF
Sbjct: 80 KALEINPTYGDAYFNIGDCEYNLQDYTAAIENYSKAIELNPKDIMAYMSRGFTKQYINDF 139
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD------------ 547
AV D S +KL YT G A S + ++K A + + KAIQ++
Sbjct: 140 AGAVSDFSIVIKLKPNLADGYTNRGFAKSYLEDFKGAIDDYTKAIQMNGSADAYFDRGKA 199
Query: 548 ---------------RNFLEAWGHLTQFYQ------DLANSEKALECLQQVLYIDKRFSK 586
+ E H Y L +++ ALE + L ID R++
Sbjct: 200 KEALNDHKGALSDFNKALRENAKHTKALYNRALTKISLQDTDGALEDFDKALEIDPRYAD 259
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGS 612
A++ RG+L +GQ + +DL + S
Sbjct: 260 AFYERGMLKIKVGQKEAGFQDLKAAS 285
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 35/165 (21%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG + +A A+S F ++K P + RG A+++ + + AI D+T+AIQ
Sbjct: 127 MSRGFTKQYINDFAGAVSDFSIVIKLKPNLADGYTNRGFAKSYLEDFKGAIDDYTKAIQM 186
Query: 445 NPSAGEAWKRRGQARAALGE----------------------------------SVEAIQ 470
N SA +A+ RG+A+ AL + + A++
Sbjct: 187 NGSA-DAYFDRGKAKEALNDHKGALSDFNKALRENAKHTKALYNRALTKISLQDTDGALE 245
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
D KALE +P AD +ERG++ K A +DL A L E
Sbjct: 246 DFDKALEIDPRYADAFYERGMLKIKVGQKEAGFQDLKAASGLGHE 290
>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
Length = 398
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +D +LKE+ Y EA G+G A + AI + +A++ +P EAW
Sbjct: 167 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 226
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + ++ A+ ++++
Sbjct: 227 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 286
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + + +A EA+ KA+QLD +LEA+ L L E+AL+
Sbjct: 287 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 346
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ L +D + ++ + + L LG+ ++A
Sbjct: 347 EKALKLDPEAADSWFGKAVCLSYLGREEEA 376
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GIA G Y AI +D+ L+ DP + EA +G + A+ + +A++ +
Sbjct: 192 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 251
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G L EAI KA+E ++D+ + +G + + F+ AVE
Sbjct: 252 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 311
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+LD E AY+ LG L+ + +++A + + KA++LD ++W L
Sbjct: 312 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 371
Query: 566 NSEKALECLQQVLYIDKRFSK 586
E+A + ++ + ID R+++
Sbjct: 372 REEEAEDAYRKAVEIDPRYAE 392
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ + + L P YP A G+ + E A+ + ++ N + EAW
Sbjct: 133 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 192
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A +G EAI KALE +P + + +G+ F A++ V++D
Sbjct: 193 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 252
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ +G+ L ++ Y +A A KAI+++ + W + + ++A+E
Sbjct: 253 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 312
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +D + +AY G +L L + ++A+
Sbjct: 313 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEAL 343
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI F++ + +DP L + A E A+ + EA++ N + W
Sbjct: 65 GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 124
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +GE +A++ KAL+ +P+ + + + + + + AV+ +K +
Sbjct: 125 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENS 184
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
K A+ G+AL +G Y +A A+ KA+++D FLEAW + L + ++AL+
Sbjct: 185 NYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAY 244
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + ID A++ G+ L L ++ +AI
Sbjct: 245 EKAVEIDPENDDAWNNMGIDLENLERYDEAI 275
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI + + + E D+ N+ F SQ++ + KA+QLDP L+
Sbjct: 265 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 324
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
AY G + L R EEAL ++EK
Sbjct: 325 AYSSLGFVLAQLKRFEEALDIYEK 348
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K ++ I ++ + D + + A L SL + +A+++ + + E D
Sbjct: 63 RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 120
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL L P A+ K S GR EEA+ Y
Sbjct: 121 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 176
Query: 131 EHALHQSADLKQ 142
+ L ++++ K+
Sbjct: 177 DIVLKENSNYKE 188
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ Q+ + I DKAL++DP L+A+ KG +LG ++AL +EK E
Sbjct: 191 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 249
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++G ++ A+ + + ++ DP Y EA G A + E A+ + +A
Sbjct: 290 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 349
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ +P A ++W + + LG EA KA+E +P A+I
Sbjct: 350 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 393
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 58/120 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ + +N A+ + D N AL S+G +++A + + +A++
Sbjct: 54 LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 113
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ Y + EKA+E + L + + A++ + L L G++++A+
Sbjct: 114 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 173
>gi|428302097|ref|YP_007140403.1| hypothetical protein Cal6303_5553 [Calothrix sp. PCC 6303]
gi|428238641|gb|AFZ04431.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 211
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G AI F+Q +K +P Y EA RG AR + + AI+D+T+AI+ N
Sbjct: 27 NRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGFARYELGDKQGAITDYTQAIKIN 86
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR+ LG+ A+ D ++A++ PN A+ + RG+V K D A+ D
Sbjct: 87 PNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDAEAYNNRGVVRSKLGDKQGAITD 146
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G+ S +G+ + A + KA G L + D A
Sbjct: 147 YTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDFQKA-----------GELLKQQGDNA 195
Query: 566 NSEKALECLQQV 577
E+ ++ ++Q+
Sbjct: 196 KYERVMKLIEQI 207
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 98/184 (53%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ +AI+ NP+ A+ RG R+ LG+ AI D ++A++ PN A+ + RG
Sbjct: 5 QGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGF 64
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ D A+ D + +K++ + AY+ G+A S +G+ + A +AI+++ N
Sbjct: 65 ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDA 124
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + L + + A+ Q + I+ ++AY+ RG++ LG + AI+D
Sbjct: 125 EAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDFQKA 184
Query: 612 SRTM 615
+
Sbjct: 185 GELL 188
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 97/182 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AI+ ++Q +K +P A RG+ R+ + + AI DF +AI+ NP+ EA+
Sbjct: 2 GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG+ AI D ++A++ PN A+ RGI + D A+ D + +K++
Sbjct: 62 RGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINP 121
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G+ S +G+ + A + +AI+++ N +A+ + +L + + A++
Sbjct: 122 NDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDF 181
Query: 575 QQ 576
Q+
Sbjct: 182 QK 183
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+G+ AI D ++A++ PN + RG D A+ D + +K++ AY
Sbjct: 1 MGDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYN 60
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G A +G+ + A + +AI+++ N EA+ + +L + + AL Q + I+
Sbjct: 61 NRGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKIN 120
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++AY+ RG++ LG + AI D +
Sbjct: 121 PNDAEAYNNRGVVRSKLGDKQGAITDYTQA 150
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
+RY L I + + ++++ A A + AR EL K +L ++++AI+I +
Sbjct: 65 ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKI-NPND 123
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A++Y NR S+L + I D +A++++P L QAY +G S LG ++ A+
Sbjct: 124 AEAYN-----NRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAI 178
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDR 157
++K E L Q D ++ + +L+ + R
Sbjct: 179 QDFQKAGE-LLKQQGDNAKYERVMKLIEQIQNLR 211
>gi|440684784|ref|YP_007159579.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681903|gb|AFZ60669.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 269
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 9/234 (3%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G Y AI + Q + + + I RG AR+ ++ + AI DF +AI+ +P +A+
Sbjct: 19 NSGDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAY 78
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG ARAA+GE+ AI+D +A++ P RG +F ++ A+ED S ++
Sbjct: 79 AERGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYSGNYQGALEDFSLITRM 138
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ S Y LG+ S G + + KA+ +D N + A+ DL + + A
Sbjct: 139 ERSAISYYN-LGILQYSQGINSQVIKHLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFA 197
Query: 573 CLQQVLYI-----DKRFSK---AYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ +I DK + + A + RGL H LG + AI DL ++ + H
Sbjct: 198 DFAEAKHIESVGADKIYFEDEFALYARGLAYHRLGNRENAIADLQESAQIALKH 251
>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
Length = 280
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 9/227 (3%)
Query: 365 NKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK+ VT I + + S + F + +G Q +G +AI+ +D+ + DP Y
Sbjct: 36 NKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQAAIASYDKAIGLDPDYSA 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A GRG A + + AI+D+ EAI+ +P+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D A+ED + ++L+ + AY G A +S G+ + A
Sbjct: 155 RLSPNYAEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ +AI+L+ NF A+ + + + ALE LQ+ I +R
Sbjct: 215 ISDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKAADIFQR 261
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + +AAI+ + +AI +P A++ RG A LG+ +AI D ++A+ PN A+ +
Sbjct: 72 QGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFN 131
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG D A+ D + ++L AY G A S G+ + A E +AI+L+
Sbjct: 132 SRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGALEDFNQAIRLN 191
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + + + A+ Q + ++ F AY+ RG G + A++D
Sbjct: 192 PKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALED 251
Query: 608 L 608
L
Sbjct: 252 L 252
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++ + +N AG+ + + GQ + A G+S AI KA+ +P+ + RG+
Sbjct: 43 EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F D A+ D + ++L + A+ G A +S+G+ A + +AI+L N+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + + ALE Q + ++ +++ AY+ RG G + AI D +
Sbjct: 162 EAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQA 221
Query: 612 SR 613
R
Sbjct: 222 IR 223
>gi|334117425|ref|ZP_08491516.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460534|gb|EGK89142.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 673
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 112/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N GK +AI+ +D+ L+ P Y EA RG A LEAAI+ F +A++
Sbjct: 302 NRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIK 361
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+ + + + RG AA+
Sbjct: 362 PEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGRLEAAIAS 421
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL ++G ++ A ++ KA+++ ++ W + +L
Sbjct: 422 YDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLG 481
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 482 RLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAI 521
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 9/298 (3%)
Query: 333 ISDNKSSDSTESRSKLSFKW---DMLKETSNEAKRNK---KFCVTRISKSKSISVDFRLS 386
+S +K ESR S +W D L T E KR + + ++ +
Sbjct: 175 LSMDKELLQLESRQACSERWKQEDYLALTPQERKRELVRIQSLIDEDGQTPEQQAELFYE 234
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ + A AI+ FD+ L+ P A RG A E AI+ + +A++ P
Sbjct: 235 QGLLYGYAEESAKAIASFDKALEFKPDNHVAWYNRGIALGSLGRFEEAIASYDKALEFKP 294
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG+ AI KALE +P+ + + RGI AA+
Sbjct: 295 DEEYAWNNRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSF 354
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ E A+ G+AL ++G +++A ++ +A++ + EAW + +L
Sbjct: 355 DKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGR 414
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
E A+ + L I +A++ RG+ L LG+ + AI + + P H+ WN
Sbjct: 415 LEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDK-ALEIKPDYHVPWN 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + RGIA N G+ +AI+ FD+ L+ P Y EA RG A
Sbjct: 316 AIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIAL 375
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI + +A++ EAW RG A LG AI KALE + S +
Sbjct: 376 GNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEA 435
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI + AA+ +++ + + G+AL ++G ++A + KA++
Sbjct: 436 WYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALE 495
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + EAW + +L E+A+ + L I + ++ RG L LG+ K+AI
Sbjct: 496 IKPDDDEAWYNRGIALGNLGRWEEAIASFDKALEIKPDYHVGWYNRGNALGNLGRGKEAI 555
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G++ AI+ +D+ L+ P A RG A +LEAAI+ + +A++
Sbjct: 268 NRGIALGSLGRFEEAIASYDKALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIK 327
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI KALE +P + + RGI + A+
Sbjct: 328 PDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVS 387
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G + A ++ KA+++ EAW + +L
Sbjct: 388 YDQALEFKADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLG 447
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + L I + ++ RG+ L LG+ ++AI
Sbjct: 448 RWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAI 487
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I ++ + RGIA N G++ AI +DQ L+ EA RG+A
Sbjct: 350 AITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSAL 409
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LEAAI+ + +A++ + EAW RG A LG AI KALE +P+
Sbjct: 410 GNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVP 469
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI A+ +++ ++ A+ G+AL ++G +++A + KA++
Sbjct: 470 WNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALE 529
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ W + +L ++A+ + L A++ RG+ L LG+ ++AI
Sbjct: 530 IKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYRGISLDDLGRGEEAI 589
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K+ S + +RGIA N G++ +AI+ +D+ L+ P Y RG A LE AI+
Sbjct: 429 KAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAIA 488
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F +A++ P EAW RG A LG EAI KALE +P+ + RG
Sbjct: 489 SFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALEIKPDYHVGWYNRGNALGNL 548
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-- 554
A+ ++ ++ +A+ Y G++L +G ++A ++ KA++ + AW
Sbjct: 549 GRGKEAIASYDKALEFKPDDHAAWYYRGISLDDLGRGEEAIASYDKALEFKPDDDAAWNN 608
Query: 555 -----GHLTQFYQDLANSEKALE 572
G+L + + +A+ +KALE
Sbjct: 609 RGLALGNLGRLEEAIASYDKALE 631
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ +AI+ +D+ L+ EA RG A EAAI+ + +A++
Sbjct: 404 NRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIK 463
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W RG A LG EAI KALE +P+ + + RGI + A+
Sbjct: 464 PDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIAS 523
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G AL ++G K+A ++ KA++ + AW + DL
Sbjct: 524 FDKALEIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYRGISLDDLG 583
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L A++ RGL L LG+ ++AI
Sbjct: 584 RGEEAIASYDKALEFKPDDDAAWNNRGLALGNLGRLEEAI 623
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + +RGIA N G+ AI+ FD+ L+ P EA RG A
Sbjct: 452 AIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIAL 511
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ F +A++ P W RG A LG EAI KALEF+P+
Sbjct: 512 GNLGRWEEAIASFDKALEIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAA 571
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI A+ ++ ++ +A+ GLAL ++G ++A ++ KA++
Sbjct: 572 WYYRGISLDDLGRGEEAIASYDKALEFKPDDDAAWNNRGLALGNLGRLEEAIASYDKALE 631
Query: 546 LDRNFLEAW 554
+ AW
Sbjct: 632 FKPDDDAAW 640
>gi|425470454|ref|ZP_18849324.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
9701]
gi|389883930|emb|CCI35726.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
9701]
Length = 282
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ RG A N G++ AI+ +D+ L+ P Y EA RG A
Sbjct: 4 AIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVAL 63
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R E AI+ + A++ P +AW RG A LG EAI +ALEF+P+ +
Sbjct: 64 GNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEA 123
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
H RGI F A+ ++ + A+ G+AL ++G +++A + +A++
Sbjct: 124 WHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALE 183
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ + EAW + + ALE + I+ ++ AY+
Sbjct: 184 IKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYY 227
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N ++ AI+ +D+ L+ P P+A GRG A E AI+ + A++
Sbjct: 58 NRGVALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFK 117
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALEF+P+ D + RG+ F A+
Sbjct: 118 PDYHEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIAS 177
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL+ +G YK A E++ AI+++ N+ A+ + Y
Sbjct: 178 CDRALEIKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYYNKACCYGLQN 237
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D +
Sbjct: 238 NVELAIENLQRAINLDVEY 256
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +D+ L+ P Y +A GRG A E AI+ + ++ P EAW RG A
Sbjct: 4 AIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVAL 63
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EAI +ALE +P+ D + RG+ F A+ ++ + A
Sbjct: 64 GNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEA 123
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL ++G +++A + +A++ ++ +AW + +L E+A+ + L
Sbjct: 124 WHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALE 183
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
I +A+ RG L +G++K A++
Sbjct: 184 IKPDLHEAWDSRGAALTFMGRYKDALE 210
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI+ + A++ P +AW RG A LG EAI + LEF+P+ + + RG
Sbjct: 1 MEEAIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRG 60
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + F A+ +++ ++ A+ G+AL ++G +++A + +A++ ++
Sbjct: 61 VALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDY 120
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + ++L E+A+ + L + A++ RG+ L LG+ ++AI
Sbjct: 121 HEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAI 175
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR L + I CD+AL++ P L +A+ +G A + +GR ++AL + Y+HA
Sbjct: 160 NRGVALGNLGRFEEAIASCDRALEIKPDLHEAWDSRGAALTFMGRYKDAL----ESYDHA 215
Query: 134 L 134
+
Sbjct: 216 I 216
>gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413]
gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 280
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 9/227 (3%)
Query: 365 NKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK+ VT I + + S + F + +G Q +G AI+ +D+ + DP Y
Sbjct: 36 NKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQGAIASYDKAIGLDPDYGA 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A GRG A + + AI+D+ EAI+ +P+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D + ++ED + ++L+ + AY G A +S G+ + A
Sbjct: 155 RLSPNYAEAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARASQGDSQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ +AI+L+ NF A+ + + + ALE LQ+ I +R
Sbjct: 215 ISDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKAADIFQR 261
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + + AI+ + +AI +P G A++ RG A LG+ +AI D ++A+ PN A+ +
Sbjct: 72 QGDSQGAIASYDKAIGLDPDYGAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFN 131
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG D A+ D + ++L AY G A S G+ + E +AI+L+
Sbjct: 132 SRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKSGSIEDFNQAIRLN 191
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + +S+ A+ Q + ++ F AY+ RG G + A++D
Sbjct: 192 PKYAIAYNNRGNARASQGDSQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALED 251
Query: 608 L 608
L
Sbjct: 252 L 252
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++ + +N AG+ + + GQ + A G+S AI KA+ +P+ RG+
Sbjct: 43 EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQGAIASYDKAIGLDPDYGAAYRGRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F D A+ D + ++L + A+ G A +S+G+ A + +AI+L N+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + ++E Q + ++ +++ AY+ RG G + AI D +
Sbjct: 162 EAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARASQGDSQGAISDYNQA 221
Query: 612 SR 613
R
Sbjct: 222 IR 223
>gi|427729657|ref|YP_007075894.1| hypothetical protein Nos7524_2456 [Nostoc sp. PCC 7524]
gi|427365576|gb|AFY48297.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 276
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 99/183 (54%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ F++ ++ +P + RG ARA +L AI+DF +A+Q N + +A+K
Sbjct: 63 GDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQINSNDADAYKN 122
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+AR G+ AI D ++AL+ PN AD + RG+ D ++ED + ++++
Sbjct: 123 RGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGSIEDFNQALRINP 182
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+ + G+ K A E +A++++ N +++ + Y L + +KA+ L
Sbjct: 183 NYVDAYNNRGVNRALEGDLKSAIEDFNQALEINPNNADSYKNRGIAYSQLGDVKKAIADL 242
Query: 575 QQV 577
Q+
Sbjct: 243 QKA 245
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI+ F+Q L+ + +A RG AR +L AI+DF +A+Q N
Sbjct: 88 NRGKARALSGDLPGAIADFNQALQINSNDADAYKNRGKARVLSGDLPGAIADFNQALQIN 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG AR G+ +I+D ++AL PN D + RG+ D +A+ED
Sbjct: 148 PNDADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIED 207
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ ++++ N +Y G+A S +G+ KKA KA +L
Sbjct: 208 FNQALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D SRG+A+ N G +I F+Q L+ +P Y +A RG RA + +L++AI DF +
Sbjct: 151 ADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIEDFNQ 210
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
A++ NP+ +++K RG A + LG+ +AI DL KA E
Sbjct: 211 ALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248
>gi|145495192|ref|XP_001433589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400708|emb|CAK66192.1| unnamed protein product [Paramecium tetraurelia]
Length = 652
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI N Y AI +D+I+ +P Y A G+G + E AI + E
Sbjct: 231 FDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNE 290
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP+ + W +G L + EAI+ ++A+ D + +GI +
Sbjct: 291 AISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYK 350
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + ++ + A+ G L ++ +Y++A + + +AI ++ + +AW +
Sbjct: 351 EAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGAT 410
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L E+A+EC +++ I+++F A++ +G L L Q+++AIK
Sbjct: 411 LDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIK 456
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI + +Y AI +D+I+ +P Y A G+G + E AI + E
Sbjct: 95 FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNE 154
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP AW +G A L + EAI+ ++A+ PN D+ + +G +
Sbjct: 155 AISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYE 214
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ + + ++ + A+ G+ L ++ Y++A E + + I ++ ++ AW
Sbjct: 215 EAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNT 274
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++L E+A++C + + I+ ++ +G L L Q+++AIK
Sbjct: 275 LRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIK 320
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 104/214 (48%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y AI ++Q + +P Y +A +G E AI + E I NP AW
Sbjct: 209 NLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAW 268
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G L + EAI+ ++A+ PN D+ + +G + A++ + + +
Sbjct: 269 NGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISI 328
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + A+ G+ L + +YK+A E + + I ++ ++ AW ++L E+A++
Sbjct: 329 NHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIK 388
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
C Q + I+ ++ A++ +G L L Q+++AI+
Sbjct: 389 CYNQAISINPKYFDAWYNKGATLDNLNQYEEAIE 422
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 109/220 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G +N +Y AI +++ + +P + A +G A + E AI + EAI NP
Sbjct: 135 KGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINP 194
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + W +G L + EAI+ ++A+ P D + +GI + A+E
Sbjct: 195 NQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECY 254
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + A+ G L ++ +Y++A + + +AI ++ N + W ++L
Sbjct: 255 DEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQ 314
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++C + + I+ ++ A++ +G+ L L Q+K+AI+
Sbjct: 315 YEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIE 354
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y AI +++ + +P Y +A +G R + E AI + EAI N +AW
Sbjct: 40 NLNQYEEAIKCYNEAVSMNPKYFQAWNNKGNLRNL-NQYEEAIKCYNEAISINHKYFDAW 98
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G L + EAI+ + + P +G + A++ + + +
Sbjct: 99 YNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISI 158
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ ++ A+ G+AL ++ +Y++A + + +AI ++ N + W ++L E+A++
Sbjct: 159 NPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIK 218
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
C Q + I+ ++ A++ +G+ L L +++AI+
Sbjct: 219 CYNQAISINPKYFDAWYNKGITLDNLNYYEEAIE 252
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 9/219 (4%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQ--------RELEAAISDFTEAIQSNPS 447
+Y AI +D+ L +P Y +AL +G + + E AI + EA+ NP
Sbjct: 1 QYQVAIECYDEALSINPQYFKALNNKGNLKNLNLGISLENLNQYEEAIKCYNEAVSMNPK 60
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW +G R L + EAI+ ++A+ D + +GI + A+E
Sbjct: 61 YFQAWNNKGNLR-NLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYD 119
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ + A+ G L ++ +Y++A + + +AI ++ AW + Q+L
Sbjct: 120 EIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQY 179
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++C + + I+ ++ +G L L Q+++AIK
Sbjct: 180 EEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIK 218
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 86/188 (45%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y AI +++ + + Y +A +G + + AI + E I NP AW
Sbjct: 311 NLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAW 370
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G L + EAI+ ++A+ P D + +G + A+E + +
Sbjct: 371 NGKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISI 430
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+++ A+ G L + +Y++A + + +AI ++ + +AW + Q+L E+A++
Sbjct: 431 NQKFIHAWNGKGNTLRKLNQYEEAIKCYNEAISINHKYFDAWNNKGISLQNLNQYEEAIK 490
Query: 573 CLQQVLYI 580
C + + I
Sbjct: 491 CYNEAISI 498
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI + +Y AI +D+I+ +P Y A G+G + E AI + +
Sbjct: 333 FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQ 392
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP +AW +G L + EAI+ + + + +G K +
Sbjct: 393 AISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYE 452
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A++ + + ++ + A+ G++L ++ +Y++A + + +AI +
Sbjct: 453 EAIKCYNEAISINHKYFDAWNNKGISLQNLNQYEEAIKCYNEAISI 498
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++G N +Y AI +D+I+ + + A G+G + E AI + E
Sbjct: 401 FDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIKCYNE 460
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
AI N +AW +G + L + EAI+ ++A+ +P
Sbjct: 461 AISINHKYFDAWNNKGISLQNLNQYEEAIKCYNEAISIKP 500
>gi|145524609|ref|XP_001448132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415665|emb|CAK80735.1| unnamed protein product [Paramecium tetraurelia]
Length = 879
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ S+G + + AI + L +P + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHSQGFDARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD+T+AI+ + A+ RG + G+ AI+D +K++E +P+ AD H +G K
Sbjct: 324 SDYTKAIEMDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +G++ KA++ +L A + N
Sbjct: 384 KNLVREAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
H+ E AL+ L ID+ ++ AY+ RGL+ +G+ +KA +D +
Sbjct: 444 HIGILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKA 499
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K A+ F+ LK D Y A GRG E E A DF +AI+ P
Sbjct: 446 GILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQ 505
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
RG + ++ + EA++D KAL + + I G+V K +DF AV S
Sbjct: 506 NPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAVYCYS 565
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +EN G L+ +G++ +A + KAI LD + A + + +
Sbjct: 566 QELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIHAIYNRGICNERIGEF 625
Query: 568 EKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KA+E V+ + + + + AY RG +G+ AI D S
Sbjct: 626 RKAIEDFTSVIQLQNDQGANAYFNRGCCYDNIGEMDLAIADYSKA 670
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 126/603 (20%), Positives = 247/603 (40%), Gaps = 79/603 (13%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY---E 131
RA Y + ++ I+DC+K L+ D + Y L+GCA LG+ + A+ + K E
Sbjct: 48 RASAYIKKGEYQTAIQDCNKLLETDSDNVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDE 107
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMS-SLTVSESGLNANDKMSETSE 190
+ ++ + L L+ A +D + E D + S++ S ++++ L N M + E
Sbjct: 108 NHVNAAFARASCLNLKGDFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKK-DE 166
Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREV 250
+ K++ +++ + + DL N ++DE ++ ++
Sbjct: 167 PYPKTEAFQFTTKKNKYQQ-----PEEDDLMNPQNDEE-------------YLQNDQSQI 208
Query: 251 SENHNGSSDGSKST-HASRDASEINRQSSD---DFDICNGPIDKASVNERHGRQTNGTHD 306
+S S++ + S DA+E+N Q D +I + P+ + ++ N
Sbjct: 209 QNQPQQTSFMSQNPLYTSIDANELNIQRPSQIIDKEI-SQPMQQQLISMIPENIQNDNKK 267
Query: 307 VHDKLSS---DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
+ D S D+ D E Y+ + + + S +R F +D L+ N+A
Sbjct: 268 ISDWFHSQGFDARKKEDFIKAIEFYTMALMFNPNHFKSIFNR---GFAFDKLR-MYNDAI 323
Query: 364 RNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ T+ + S + +RGI+ +G Y AI F + ++ DP + +G
Sbjct: 324 SD----YTKAIEMDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGF 379
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD------------ 471
A + + AI +F E I+ + + +A+ R LG+ +A QD
Sbjct: 380 AMKKKNLVREAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNP 439
Query: 472 ----------------------LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ +L+ + N A + RG+V K +F A +D +
Sbjct: 440 NTLTHIGILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKA 499
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++++ +N G S+ ++++A E KA+ LD + ++ + + + E
Sbjct: 500 IEIEPQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFET 559
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR--TMMPHLIWNLTRWR 627
A+ C Q L + ++ + RG L LGQ +AI D + + H I+N R
Sbjct: 560 AVYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIHAIYN----R 615
Query: 628 NLC 630
+C
Sbjct: 616 GIC 618
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + K+ A+ F + L D P G + E A+ +++ + +
Sbjct: 512 NRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAVYCYSQELIYS 571
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
RG A LG+ EAI D +KA+ +P + ++ RGI N + +F A+ED
Sbjct: 572 QENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIHAIYNRGICNERIGEFRKAIED 631
Query: 506 LSACVKL-DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++ ++L + + +AY G +IGE A + KA+++D
Sbjct: 632 FTSVIQLQNDQGANAYFNRGCCYDNIGEMDLAIADYSKALEID 674
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
L++ +Q KY +I+I + I LK P + +AL R +A + E + AI D
Sbjct: 6 LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
+ ++++ + RG A LG+ AI+D SK L + N + R +N K
Sbjct: 66 NKLLETDSDNVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124
Query: 498 DFNAAVEDLSACVKLD 513
DF A+ED + ++ D
Sbjct: 125 DFAGAIEDYTRALEKD 140
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T +++ P+ +A R A GE AIQD +K LE + ++ + RG N K
Sbjct: 32 TGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDCNKLLETDSDNVGGYYLRGCANEKLGQ 91
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ A+ED S + LD+ + +A L+ G++ A E + +A++ D
Sbjct: 92 IDLAIEDFSKVLSLDENHVNAAFARASCLNLKGDFAGAIEDYTRALEKD 140
>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 703
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G A + G+ +A+ +DQ ++ YPEA GRG A A + EAAIS F + +
Sbjct: 370 LGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKGRGEALAALQRYEAAISAFDQVTKL 429
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W+RRG + L AI KALE +PN + + RG + + A++
Sbjct: 430 QPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIK 489
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+ ++ + G A ++ +++ A +++ KA+Q +F AW +L
Sbjct: 490 SYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNL 549
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL +Q + + +A++ R LH L ++ +A+
Sbjct: 550 NQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEAL 590
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 110/210 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S +++ ++ P Y EA +G+G A + EAA+ + +AIQ EAWK R
Sbjct: 347 RYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKGR 406
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A AAL AI + + +P + RG+V K + ++AA+ +++
Sbjct: 407 GEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPN 466
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ G AL ++ +Y++A +++ KA++ + E W + +L A++ Q
Sbjct: 467 YSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQ 526
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + F +A++ +G +L+ L Q+++A+
Sbjct: 527 KAVQFQPDFYRAWYSQGSILNNLNQYQEAL 556
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A +Y +AIS FDQ+ K P E RG + + AAI+ + +A++
Sbjct: 405 GRGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQ 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RRG A L + EAI+ KA+E +P+SA+ ++RG AV+
Sbjct: 465 PNYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDS 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ + A+ G L+++ +Y++A A +A++L N EAW L
Sbjct: 525 YQKAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQ 584
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL ++ + + +A++ RG + + L Q++ AI
Sbjct: 585 RYDEALMAYEKAVKLRPNSEQAWYNRGNVFYTLEQYQDAI 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 112/234 (47%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+++K + V+ RG+ Q+ +Y++AI+ +D+ L+ P Y A RG A ++
Sbjct: 425 QVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQY 484
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI + +A++ P + E W +RG A L + +A+ KA++F+P+ + +G
Sbjct: 485 EEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGS 544
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+ VKL + A+ AL + Y +A A+ KA++L N
Sbjct: 545 ILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSE 604
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AW + + L + A+ Q + + +A++ R L L ++ +A+
Sbjct: 605 QAWYNRGNVFYTLEQYQDAIAAYDQAVAHKRSHYQAWNSRANALFNLKRYNEAL 658
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S ++ RG A VN K+ A+ + + ++ P + A +G+ + + A++
Sbjct: 498 KPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNLNQYQEALA 557
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F +A++ P++ EAW R A L EA+ KA++ PNS + RG V +
Sbjct: 558 AFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSEQAWYNRGNVFYTL 617
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ V + + A+ AL ++ Y +A ++ A+ N+ EA
Sbjct: 618 EQYQDAIAAYDQAVAHKRSHYQAWNSRANALFNLKRYNEALTSYENALTYQPNYKEA 674
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 34/178 (19%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R E A+S + A++ P EAW +G A ALG+S A+ +A++ + +
Sbjct: 346 RRYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKG 405
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + AA+ KL E+ + G+ + Y A
Sbjct: 406 RGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAA------------ 453
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+A+ +KALE I +S A++ RG LH L Q+++AIK
Sbjct: 454 ---------------IASYDKALE-------IQPNYSSAWYRRGWALHNLQQYEEAIK 489
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
D+ L ++ + D+ +++ A R E L +L+ + AI D + Q
Sbjct: 374 DALLALGQSEAALDAYDQAIQIQREYPEAWKGRGE--ALAALQRYEAAISAFDQVTKLQP 431
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+++ R +L+ + I DKAL++ P A+ +G A L + EEA+ +
Sbjct: 432 EDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSY 491
Query: 127 EKGYEH 132
+K EH
Sbjct: 492 DKAVEH 497
>gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
Length = 724
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ I S+G+ ++ +G +A+ Q + + PEA RG A + +
Sbjct: 327 FNRPDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYYDLEQYQ 386
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+T+AIQ NP+ A+ RG AR + AI D SK +E EP D ++RG+
Sbjct: 387 NAIEDYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAYYKRGLA 446
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFL 551
++ +D+ A+ED S +++ ++ AY G+A + G+ + + +AI+LD +N L
Sbjct: 447 HYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRLDSKNIL 506
Query: 552 EAWGH-LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ T+F+ L + + AL +V+ + S Y R L +H+ AI D
Sbjct: 507 AYYDRGRTRFH--LGDYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAIDD 561
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA+VN G ++ + Q ++ D A RG R + + A++D+ I+
Sbjct: 476 SRGIARVNSGDLQGGLADYTQAIRLDSKNILAYYDRGRTRFHLGDYQGALADYDRVIELQ 535
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + R + L + AI D +KA++ EPN+ + R + + + A+ D
Sbjct: 536 PDNSFVYGNRCSTQINLSKHQAAIDDCTKAIQLEPNAV-AYNNRCVAYLNISELDKALAD 594
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY+ G+ + +++ A + KAI+L+ N +++ + Y +L
Sbjct: 595 CTKAIELTPTDHKAYSNRGMVQVAQQDFQAAIADYTKAIELNPNDAQSYSNRATTYYELQ 654
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
+ +A+ Q + + + AY+ RG++ LG AI D + + +
Sbjct: 655 DYNQAIADYVQAIRLKPDYPNAYYGRGIVRVALGDKSGAINDFRTAGQLYL 705
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A+ + + AI+ + ++++ +P +A RG A + + AI D++E I+
Sbjct: 407 FNRGLARYDAQDLSGAIADYSKVIELEPTDVDAYYKRGLAHYALEDYQKAIEDYSEVIRI 466
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
A++ RG AR G+ + D ++A+ + + ++RG F D+ A+
Sbjct: 467 QSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRLDSKNILAYYDRGRTRFHLGDYQGALA 526
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L +N Y ++ +++ A + KAIQL+ N + A+ + Y ++
Sbjct: 527 DYDRVIELQPDNSFVYGNRCSTQINLSKHQAAIDDCTKAIQLEPNAV-AYNNRCVAYLNI 585
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +KAL + + + KAY RG++ + AI D +
Sbjct: 586 SELDKALADCTKAIELTPTDHKAYSNRGMVQVAQQDFQAAIADYT 630
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P A + +G+ + + AAV L+ + + +N AY G A + +Y+ A E
Sbjct: 331 DPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYYDLEQYQNAIE 390
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AIQL+ N+ A+ + D + A+ +V+ ++ AY+ RGL + L
Sbjct: 391 DYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAYYKRGLAHYAL 450
Query: 599 GQHKKAIKDLSSGSRTMMPH 618
++KAI+D S R H
Sbjct: 451 EDYQKAIEDYSEVIRIQSDH 470
>gi|434402232|ref|YP_007145117.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428256487|gb|AFZ22437.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 537
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + + G + AI+ FD L+ P + A RG + AI+D+ +AI+ N
Sbjct: 82 SRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNIFYILGKYSDAIADYDQAIRLN 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R AL + AI D +++LE PN + + RG+ K + A+ D
Sbjct: 142 PNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIAD 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A +KL+ ++ AY GL S++G+ +KA + +A+Q + +G L
Sbjct: 202 FNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ ++L ++ ++ Y R LG ++ AI+D +
Sbjct: 262 DYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYN 305
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI +++ L+ + A GRG AR ++ + AI D T AI+ P A+
Sbjct: 295 GDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCN 354
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG+ AI D S+AL+ P+ + + RG + +++ A+ D + ++++
Sbjct: 355 RGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINP 414
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ Y+ A ++ +Y A + +AI LD++ E W + + L N E AL L
Sbjct: 415 DSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDL 474
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
Q L + ++ AY LR + LGQ + AI D + + H N +R +
Sbjct: 475 NQALQLQPDWATAYILRADVHRNLGQEENAIADFQQAAE--LYHQQGNTQYYRQI 527
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY+ AI+ +DQ ++ +P + A RG R + AI+D+ +++ NP+ GEA+
Sbjct: 125 GKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYS 184
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L + +AI D + AL+ P+ +ERG+V D A+ D + ++ +
Sbjct: 185 RGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQALQENP 244
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y + A +G+Y+ A + +QL+ N E + + L + + A++
Sbjct: 245 TLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDY 304
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L I+ + AY+ RG+ L + AI+D
Sbjct: 305 NRALQINVNLAFAYYGRGIAREALKDFQGAIED 337
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI+ ++Q L+E+P R AR + + AI+D +Q NP
Sbjct: 219 RGLVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNP 278
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E + R AR ALG+ AIQD ++AL+ N A + RGI KDF A+ED
Sbjct: 279 NLAEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDN 338
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ E AY G A +G+ + A + +A+Q++ + +EA+ + L
Sbjct: 339 TLAIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEE 398
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E A+ Q L I+ + Y R + L + AI D +
Sbjct: 399 YEGAIADFTQALQINPDSAPFYSDRANAYYALEDYPAAIADYN 441
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++S I+ +F SRG+ + KY AI+ F+ LK +P +A RG
Sbjct: 164 AIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVY 223
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+D+ +A+Q NP+ + R AR LG+ AI D ++ L+ PN A+
Sbjct: 224 SALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEG 283
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+R D+ A++D + ++++ AY G+A ++ +++ A E + AI+
Sbjct: 284 YCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIE 343
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ F A+ + + L + + A+ Q L I+ +AY+ RG + L +++ AI
Sbjct: 344 IAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAI 403
Query: 606 KDLS 609
D +
Sbjct: 404 ADFT 407
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ +++ L+ +P + EA RG + ++ E AI+DF A++ NP +A+ RG
Sbjct: 161 YPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERG 220
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ALG+ +AI D ++AL+ P A + R + D+ A+ D + ++L+
Sbjct: 221 LVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNL 280
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y A ++G+Y+ A + + +A+Q++ N A+ + L + + A+E
Sbjct: 281 AEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTL 340
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ I F+ AY RG LG + AI D S + + P LI
Sbjct: 341 AIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQ-ALQINPDLI 383
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M E LI +G + Q + AI+ + EA++ NP A+ RGQA AL E EAI +
Sbjct: 1 MNAEDLINQGLNKDLQGDYLGAIALYNEALRLNPCLALAFYHRGQAYFALSEYSEAIANY 60
Query: 473 SKALEFEPNS------ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+E + A H RG+ F D A+ D + ++ +AY+ G
Sbjct: 61 RQAIEHKLTQNINFDIAKAYHSRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNI 120
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+G+Y A + +AI+L+ NF A+ + L + A+ + L I+ F +
Sbjct: 121 FYILGKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGE 180
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSS 610
AY+ RGL L +++KAI D ++
Sbjct: 181 AYYSRGLFFSHLKKYEKAIADFNA 204
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 24/267 (8%)
Query: 297 HGRQTNGTHDVHDKLSS--DSASLNDSNTN-SESY-----SKSSISDNKSSDSTESRS-- 346
+G + N H + D + DS L N N +E Y ++ ++ D + + +R+
Sbjct: 250 YGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYNRALQ 309
Query: 347 ---KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASA 400
L+F + + + EA ++ + + + + I+ +F + RG A+ G A
Sbjct: 310 INVNLAFAY-YGRGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCNRGNARRLLGDEQGA 368
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ + Q L+ +P EA RG+ R E E AI+DFT+A+Q NP + + R A
Sbjct: 369 IADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINPDSAPFYSDRANAYY 428
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
AL + AI D ++A+ + + A+ RG + A+ DL+ ++L + +AY
Sbjct: 429 ALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAY 488
Query: 521 TY-------LGLALSSIGEYKKAEEAH 540
LG ++I ++++A E +
Sbjct: 489 ILRADVHRNLGQEENAIADFQQAAELY 515
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI+ ++Q + D E RG +R+ LE A++D +A+Q P A+ R
Sbjct: 433 YPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAYILRA 492
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
LG+ AI D +A E + + R I+N
Sbjct: 493 DVHRNLGQEENAIADFQQAAELYHQQGNTQYYRQILN 529
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI- 69
Y L K I + D+ +R++ A A R +L ++ AI + +S EI
Sbjct: 122 YILGKYSDAIADYDQAIRLNPNFAPAYHNRGN--TRYALEDYPGAIADYN----RSLEIN 175
Query: 70 ----QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+ +R +S L+ ++ I D + AL+L+P +QAY +G +SALG ++A++
Sbjct: 176 PNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIAD 235
Query: 126 WEK 128
+ +
Sbjct: 236 YNQ 238
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 1491
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A++ FDQ + P Y A RG A E A+++F +AI
Sbjct: 521 NRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQ 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +RG A LG EA+ + + + +P+ +RG+ FK A+ +
Sbjct: 581 PDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTN 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ SA+ G+ L +G +++A +AI L ++ + W + L
Sbjct: 641 FDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL QV+ + + +A+ RG++L LG+HK+A+ +
Sbjct: 701 RYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANF 743
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E R+K+ +T + S+ D+ + RG+ G++ A++ FDQ++ P
Sbjct: 799 GELGRHKE-ALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYH 857
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG A E A+++F +AI P AW RG A LG EA+ + +A+
Sbjct: 858 AWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAI 917
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+P+ RG++ K + A+ + + L + A+ G+ALS +G Y++A
Sbjct: 918 SLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEA 977
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+AI L ++ + W + L E+AL L Q + + + +A+ R +L
Sbjct: 978 LANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLS 1037
Query: 597 GLGQHKKAI 605
LG++++A+
Sbjct: 1038 NLGRYREAL 1046
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 14/303 (4%)
Query: 309 DKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKF 368
+KL+ A L S N ES S+ ST S ++ F + T E R ++
Sbjct: 146 EKLNQLLAGLKGSGYNQESVPVSN-------SSTVSGAEFWFNQGV---TLYELGRYEE- 194
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ + ++ S+ D+ +RG + G++ A++ FD+ + P Y +A GRG
Sbjct: 195 ALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAISLQPDYYQAWRGRGVVL 254
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A+++ +AI P + W RG A LG EA+ + +A+ +P+ +
Sbjct: 255 GMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSA 314
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+V FK A+ + L ++ A+ LG+AL +G ++A + + I
Sbjct: 315 WNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVIS 374
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L ++ AW + L E+AL QV+ + + A+ RG L LG++++A+
Sbjct: 375 LQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEAL 434
Query: 606 KDL 608
+
Sbjct: 435 ANF 437
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G++ A++ FDQ++ P A RG A E A+++F + I
Sbjct: 588 FKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISL 647
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + +A+ +P+ RG FK + A+
Sbjct: 648 QPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALA 707
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+ L +G +K+A + I L + AW + +L
Sbjct: 708 NFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGEL 767
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL QV+ + S A+ RG+LL LG+HK+A+
Sbjct: 768 GRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEAL 808
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G++ A++ FDQ++ P A RG E A+++F +AI
Sbjct: 622 FKRGVALFKLGRHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISL 681
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + W RG A LG EA+ + + + +P+ RG+V + A+
Sbjct: 682 QPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALA 741
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L ++ SA+ G+ L +G Y++A ++ + I L + AW + +L
Sbjct: 742 NFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGEL 801
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL QV+ + + A+ RG++L LG+HK+A+ +
Sbjct: 802 GRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANF 845
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G+ A++ FDQ++ P Y A RG A E A+++F + I P
Sbjct: 353 GVALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPD 412
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW RG A LG EA+ + + + +P+ RG FK A+
Sbjct: 413 YYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFD 472
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L ++ A+ G+AL +G ++A + + I L ++ AW + +L +
Sbjct: 473 QVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRN 532
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL Q + + +S A++ RG L LG+H++A+ +
Sbjct: 533 EEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNF 573
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ S+ DF + RG+A G++ A++ FDQ + P Y A RG
Sbjct: 875 ALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVML 934
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A+++F +AI P +AW+ +G A + LG EA+ + +A+ +P+
Sbjct: 935 IKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQT 994
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+V K + A+ +L + L + A+ LS++G Y++A + + I
Sbjct: 995 WDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVIS 1054
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + +AW + +L E+AL Q + + + + RG+ L LG+H++A+
Sbjct: 1055 LQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEAL 1114
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G+Y A++ FDQ + P + A RG A E A+++F +AI
Sbjct: 860 FKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISL 919
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + +A+ +P+ +G+ + + A+
Sbjct: 920 QPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALA 979
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + + GL L +G Y++A +AI L ++ +AW + + +L
Sbjct: 980 NFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNL 1039
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AL QV+ + +A+H RG L LG++++A+ +
Sbjct: 1040 GRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANF 1083
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G+ A++ FDQ++ P Y A RG E A+++F +AI
Sbjct: 486 FKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAISL 545
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A LG EA+ + +A+ +P+ +RG+ FK A+
Sbjct: 546 QPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEALT 605
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L ++ A+ G+AL +G +++A + I L + AW + +L
Sbjct: 606 NFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDSSAWDNRGVVLGEL 665
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL Q + + + + + RG L LG++++A+ +
Sbjct: 666 GRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANF 709
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G++ A++ FDQ + P Y + RG A E A+++F + I
Sbjct: 657 NRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQ 716
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG EA+ + + + +P+ + RG++ + + A+
Sbjct: 717 PDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTS 776
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ SA+ G+ L +G +K+A ++ + I L ++ AW + +L
Sbjct: 777 YDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELG 836
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL QV+ + A+ RG+ L LG++++A+ +
Sbjct: 837 RHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANF 879
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ G++ A++ +DQ++ P Y A RG + A+++F + I
Sbjct: 792 FNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISL 851
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW +RG A LG EA+ + +A+ +P+ RG+ + A+
Sbjct: 852 QPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALA 911
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+ L +G Y++A +AI L +F +AW +L
Sbjct: 912 NFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSEL 971
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL Q + + + + + RGL+L LG++++A+ +L
Sbjct: 972 GRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANL 1015
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 4/257 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E RN++ + ++ S+ D+ + RG A G++ A++ FDQ +
Sbjct: 519 WDNRGVVLFELGRNEE-ALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAI 577
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P A RG A E A+++F + I P AW +RG A LG EA
Sbjct: 578 SLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEA 637
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + + +P+ + RG+V + A+ + + L + + G AL
Sbjct: 638 LTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALF 697
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G Y++A + I L ++ +AW + +L ++AL QV+ + S A+
Sbjct: 698 KLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAW 757
Query: 589 HLRGLLLHGLGQHKKAI 605
RG+LL LG++++A+
Sbjct: 758 FNRGVLLGELGRYEEAL 774
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G++ A++ FDQ++ P A RG E A++ + + I
Sbjct: 725 NRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQ 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG EA+ + + +P+ RG+V + A+ +
Sbjct: 785 PDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALAN 844
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ A+ G+AL +G Y++A +AI L +F AW + +L
Sbjct: 845 FDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELG 904
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL Q + + + A+ RG++L LG++++A+ +
Sbjct: 905 RHEEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANF 947
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W L E RN++ + + S+ D+ + RG A G+Y A++ FDQ++
Sbjct: 349 WFKLGVALGELGRNEE-ALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVI 407
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P Y A RG A E A+++F + I P AW RG A LG + EA
Sbjct: 408 SLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEA 467
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + +P+ +RG+ + A+ + L + A+ G+ L
Sbjct: 468 LASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLF 527
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G ++A +AI L ++ AW + L E+AL Q + + A+
Sbjct: 528 ELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAW 587
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
RG+ L LG+H++A+ +
Sbjct: 588 FKRGVALFKLGRHEEALTNF 607
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A++ FDQ++ P A RG A E A++ F + I
Sbjct: 453 NRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQ 512
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG + EA+ + +A+ +P+ + + RG FK A+ +
Sbjct: 513 PDYYPAWDNRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTN 572
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ A+ G+AL +G +++A + I L + AW L
Sbjct: 573 FDQAISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLG 632
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL QV+ + S A+ RG++L LG+H++A+ +
Sbjct: 633 RHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANF 675
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E R+++ + ++ S+ D+ + RG A G+Y A++ FDQ++
Sbjct: 655 WDNRGVVLGELGRHEE-ALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVI 713
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P Y +A RG + A+++F + I P AW RG LG EA
Sbjct: 714 SLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEA 773
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + +P+ + RG++ + A+ + L + A+ G+ L
Sbjct: 774 LTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLG 833
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G +K+A + I L + AW +L E+AL Q + + F A+
Sbjct: 834 ELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAW 893
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
RG+ L LG+H++A+ +
Sbjct: 894 DNRGVALGELGRHEEALANF 913
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ G+Y A++ +DQ++ P A RG + A++ + + I
Sbjct: 758 FNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISL 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + + + +P+ +RG+ + + A+
Sbjct: 818 QPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALA 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+AL +G +++A +AI L ++ AW + L
Sbjct: 878 NFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKL 937
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL Q + + F +A+ +G+ L LG++++A+ +
Sbjct: 938 GRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANF 981
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + + ++ S+ DF + RG A G+Y A++ FDQ + P A RG
Sbjct: 261 KEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGV 320
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
E A++ F + I P AW + G A LG + EA+ + + +P+
Sbjct: 321 VLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYY 380
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RG FK + A+ + + L + A+ G AL +G Y++A +
Sbjct: 381 PAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQV 440
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I L ++ AW + L +E+AL QV+ + A+ RG+ L LG++++
Sbjct: 441 ISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEE 500
Query: 604 AI 605
A+
Sbjct: 501 AL 502
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A++ FDQ++ P A G A E A++ F + I
Sbjct: 317 NRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQ 376
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EA+ + + + +P+ RG FK + A+ +
Sbjct: 377 PDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALAN 436
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ G AL +G ++A + + I L + AW +L
Sbjct: 437 FDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELG 496
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+E+AL QV+ + + A+ RG++L LG++++A+ +
Sbjct: 497 RNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANF 539
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E R+++ + ++ S+ D+ + RG+ + G+Y A++ FDQ +
Sbjct: 893 WDNRGVALGELGRHEE-ALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAI 951
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P + +A G+G A + E A+++F +AI P + W RG LG EA
Sbjct: 952 SLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEA 1011
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ +L +A+ +P+ R + + A+ + L ++ A+ G AL
Sbjct: 1012 LANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISLQPDDYQAWHNRGAALG 1071
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G Y++A +AI L + + W + +L E+AL Q + + + +A+
Sbjct: 1072 ELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALASCDQAISLQPDYYQAW 1131
Query: 589 HLRGL 593
RG+
Sbjct: 1132 SNRGV 1136
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ G++ A++ DQ + P + + RG A E A+++F +AI
Sbjct: 249 GRGVVLGMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQ 308
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG + EA+ + + +P+ + G+ + A+
Sbjct: 309 PDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALAS 368
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ G AL +G Y++A + I L ++ AW + L
Sbjct: 369 FDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLG 428
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL QV+ + + A+ RG L LG++++A+
Sbjct: 429 RYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEAL 468
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQS 444
+RG+ + G+Y A++ DQ + P Y +A R + R EA SD + I
Sbjct: 997 NRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSD-DQVISL 1055
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG A LG EA+ + +A+ P+ RGI + A+
Sbjct: 1056 QPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALA 1115
Query: 505 DLSACVKLDKENKSAYTYLGL-ALSSIGEYKKAEEAHLKAIQLDRN 549
+ L + A++ G+ A+ S G ++ +L+RN
Sbjct: 1116 SCDQAISLQPDYYQAWSNRGVAAMESFGYEYFWQQNFTDCFRLERN 1161
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + + D+ + + A R + L +L +L N+ +AI SL Y
Sbjct: 869 LGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAI----SLQPDYY 924
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
D NR +L ++ + + D+A+ L P QA+ KG A S LGR EEAL+
Sbjct: 925 PAWD--NRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALA 979
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L + +A+ LD ++ Q Q NR+ S L ++ + D+ + L P Q
Sbjct: 1002 LIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISLQPDDYQ 1061
Query: 105 AYILKGCAFSALGRKEEALSVWEKG-------YEHALHQSADLKQFLELEELLTAAKQDR 157
A+ +G A LGR EEAL+ +++ Y+ L++ L + EE L + Q
Sbjct: 1062 AWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALASCDQAI 1121
Query: 158 SVTCEYDVSNSMSSLTVSES 177
S+ +Y + S + ES
Sbjct: 1122 SLQPDYYQAWSNRGVAAMES 1141
>gi|340505014|gb|EGR31393.1| peptidase c14 caspase catalytic subunit p20, putative
[Ichthyophthirius multifiliis]
Length = 974
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+ I++ K IS D+ +G + +AI ++ L+ +P + +A+ RG A +E
Sbjct: 318 SHITEKKQIS-DWYHQQGFEARKNNELETAIQLYTIALQYNPQHFKAVFNRGFAFDKLKE 376
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+T+A++ + A+ RG + G+ AI+D +KA+ P +D H RG
Sbjct: 377 YDLAIKDYTKALEIENNNCYAYYNRGISYDRKGDFDYAIKDFTKAIALNPQKSDFYHNRG 436
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K FN A++D + ++ + ++ ++ + +G+++ AE +L+A+ L N
Sbjct: 437 FAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRAICYEKMGDFQLAENDYLQALSLQPNN 496
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+L L S +ALE + L ID + Y+ +GL+L +G+ ++A ++ S
Sbjct: 497 TSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQ 556
Query: 611 G 611
Sbjct: 557 A 557
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + K AI F+ LK DP L G + E AI + E I+
Sbjct: 570 NRGCCLRSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIG 629
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG + A LG+ EAIQD S+A+ +P + LH RGI K F A+ED
Sbjct: 630 GENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIED 689
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
S +K + N +A+ G ++G+ +A + + KA+++D
Sbjct: 690 FSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEID 731
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ F++ LK D P G+G +LE A +F++AI+ + RG
Sbjct: 516 ALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQAIELDRQNPTYVHNRGCCL 575
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ + +EAI+D AL+ +PN+ IL G+V K + F A++ + +++ EN +
Sbjct: 576 RSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIGGENVRS 635
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
G + + +G++ +A + + +A+ L A + Y+ L +KA+E QV+
Sbjct: 636 LNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIEDFSQVIK 695
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+ RG LG+ +AI+D S
Sbjct: 696 QNPLNANAFFNRGCCFDNLGKIDQAIQDYS 725
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG A +G + AI F ++ + + ++ R + + A +D+ +A
Sbjct: 430 DFYHNRGFAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRAICYEKMGDFQLAENDYLQA 489
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ P+ L S+EA++ +K+L+ + + + +G++ K
Sbjct: 490 LSLQPNNTSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEE 549
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A ++ S ++LD++N + G L S + +A + A++LD N +L +
Sbjct: 550 AQQNFSQAIELDRQNPTYVHNRGCCLRSGDKLLEAIKDFENALKLDPNNTVILSNLGLVF 609
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP---H 618
+ L E A++C + + I ++ + RG LG+ +AI+D S ++ P H
Sbjct: 610 RKLEQFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFNEAIQDYSQAV-SLQPENTH 668
Query: 619 LIWNLTRWRNLCF 631
+ N R +C+
Sbjct: 669 ALHN----RGICY 677
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A F Q ++ D P + RG +L AI DF A++ +P+
Sbjct: 545 GKLEEAQQNFSQAIELDRQNPTYVHNRGCCLRSGDKLLEAIKDFENALKLDPNNTVILSN 604
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G L + AIQ ++ + + L+ RG K FN A++D S V L
Sbjct: 605 LGLVFRKLEQFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQP 664
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A G+ +G+++KA E + I+ + A+ + + +L ++A++
Sbjct: 665 ENTHALHNRGICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDY 724
Query: 575 QQVLYIDKR 583
+ L ID +
Sbjct: 725 SKALEIDNK 733
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ +AI +++ ++ +L RG + A + AI D+++A+ P A R
Sbjct: 614 QFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNR 673
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +AI+D S+ ++ P +A+ RG + A++D S +++D +
Sbjct: 674 GICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEIDNK 733
Query: 516 NKS 518
+S
Sbjct: 734 QQS 736
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++S+A+ + Q + NR CY +L + I D + ++ +P A+
Sbjct: 652 AIQDYSQAVSL------QPENTHALHNRGICYEKLGKFQKAIEDFSQVIKQNPLNANAFF 705
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+GC F LG+ ++A+ + K E
Sbjct: 706 NRGCCFDNLGKIDQAIQDYSKALE 729
>gi|296127342|ref|YP_003634594.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019158|gb|ADG72395.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 352
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG ++ L EAI+D KAL +PN D + +G++ + F A++D
Sbjct: 163 ADYADAYYNRGLLKSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ + Y G + ++ Y++A + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKISDNDAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+E + + + ++ AY+ RGL LG +++A+KD
Sbjct: 283 LYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKD 324
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++ IA+ G AI +D+ ++ Y +A RG ++ LE AI DF +A
Sbjct: 133 DAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYADAYYNRGLLKSDLVLLEEAIKDFDKA 192
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ +P+ +A+ +G LG EAI+D +KA++ N A I + RG + + +
Sbjct: 193 LSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISDNDAVIYNNRGNSKYNLELYEE 252
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D +KL+ AY G A ++G Y++A E KAI+L ++ +A+ +
Sbjct: 253 AIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTK 312
Query: 562 QDLANSEKALECLQQVLYID 581
++L E+AL+ ++ L +D
Sbjct: 313 ENLGLYEEALKDYKKALKLD 332
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQR 429
K++S+D L ++G+ + G + AI F++ +K +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISD--NDAVIYNNRGNSKYNLE 248
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ +P+ AD + R
Sbjct: 249 LYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNR 308
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ + A++D +KLD N+ A
Sbjct: 309 GLTKENLGLYEEALKDYKKALKLDPNNEYA 338
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI FD+ L DP +A +G + AI DF +AI+ + + + RG ++
Sbjct: 185 AIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISDNDAVIYNNRGNSK 244
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EAI+D KA++ PN A + RG + A+ED +KL + A
Sbjct: 245 YNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADA 304
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
Y GL ++G Y++A + + KA++LD N
Sbjct: 305 YNNRGLTKENLGLYEEALKDYKKALKLDPN 334
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 51/207 (24%)
Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
A+ F EL ISD T I S N + + +G ++A GE
Sbjct: 56 AKTFNEELNKIISDKTYLIGSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN +D + + I A T LGL
Sbjct: 116 EAIKYYDEAIKLNPNMSDAYYNKAI---------------------------AKTKLGLL 148
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+I EY KA I+L ++ +A+ + DL E+A++ + L ID
Sbjct: 149 KEAIEEYDKA-------IELRADYADAYYNRGLLKSDLVLLEEAIKDFDKALSIDPNLFD 201
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGSR 613
AY+ +G+L + LG K+AIKD + +
Sbjct: 202 AYNNKGVLENELGLFKEAIKDFNKAIK 228
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ M+ A A+ +L L ++ + KAI L + A +Y
Sbjct: 116 EAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIE-LRADYADAY----- 169
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 170 YNRGLLKSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D+ + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKISDN------DAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
>gi|427738006|ref|YP_007057550.1| hypothetical protein Riv7116_4584 [Rivularia sp. PCC 7116]
gi|427373047|gb|AFY57003.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 247
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ +G Y AI+ ++++ +P A RG ARA ++ + AI+DFT+ IQ NP+
Sbjct: 56 GNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPN 115
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A L ++ AI D +K ++F PN +ERG K +D+ A+ D S
Sbjct: 116 DTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFS 175
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++++ + Y G+A S + +Y+ A KAIQL+
Sbjct: 176 KAIQINPKIDITYYNRGIARSRLEDYQTAIADFTKAIQLN 215
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 329 SKSSISDNKSSDSTESRSKLSF----KWDMLKETSNEAKRNKK--FCVTRISKSKSISVD 382
SK++ + S++ + SKL D L+ N KR +K + +K I ++
Sbjct: 20 SKANATGLPSTNQLKPESKLQLAQANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQIN 79
Query: 383 FRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+L+ RG+A+ AI+ F ++++ +P EA RG A ++ + AI+D
Sbjct: 80 PQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIAD 139
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
FT+ IQ NP+ +A+ RG AR L + AI D SKA++ P + RGI + +
Sbjct: 140 FTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLE 199
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
D+ A+ D + ++L+ ++ AY G+A + ++K
Sbjct: 200 DYQTAIADFTKAIQLNPQSDIAYYNRGVARRKLKAHRK 237
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q+NP + + G R G+ AI DL+K ++ P A + RG+ + +D A
Sbjct: 43 QANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGA 102
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++ + + AY G+AL + + + A K IQ + N +A+
Sbjct: 103 IADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARL 162
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L + + A+ + + I+ + Y+ RG+ L ++ AI D +
Sbjct: 163 KLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLEDYQTAIADFT 209
>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1303
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +D+ ++ +P A RG + A + AI+ + +A++ N
Sbjct: 775 NRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVN 834
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A+LG EAI KA+E +P+ + + RG + A+
Sbjct: 835 PDDHLAWYNRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIAS 894
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+++ +N SA+ G +L+S+G Y++A ++ KA++L + AW + +L
Sbjct: 895 YDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLG 954
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
++A+ + + + A++ RG LH LG++++AI + + P H WN
Sbjct: 955 RYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVE-LKPDKHEAWN 1012
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 120/239 (50%), Gaps = 3/239 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + VN G+Y AI+ +D+ ++ +P A RG + E AI+ + +A++ N
Sbjct: 741 NRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVN 800
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A LG EAI +A+E P+ + RGI + A+
Sbjct: 801 PDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIAS 860
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+L ++ +++ G +L+++G Y++A ++ +A++++ + AW + L
Sbjct: 861 YDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLG 920
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
+ ++A+ + + + A++ RG LH LG++++AI + + P HL WN
Sbjct: 921 HYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVE-LKPDNHLAWN 978
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +DQ ++ +P A RG + A + AI+ + +A++
Sbjct: 877 NRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELK 936
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + LG EAI +KA+E +P++ + RG + A+
Sbjct: 937 PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 996
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L + A+ G +L+++G Y++A ++ KA++L + AW + ++L
Sbjct: 997 YNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLG 1056
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ + + I KA RG + LGQH++A+ DL+
Sbjct: 1057 RYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLN 1100
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI+ + G Y AI+ +D+ ++ P + RG + A E AI+ + +A++ N
Sbjct: 843 NRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVN 902
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A+LG EAI KA+E +P++ + RG + A+
Sbjct: 903 PDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 962
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L +N A+ G +L ++G Y++A ++ KA++L + EAW + +L
Sbjct: 963 YNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLG 1022
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + + + A++ RG L LG++++AI
Sbjct: 1023 RYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAI 1062
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + N G+Y AI+ +DQ ++ +P A RG + A + AI+ + +A++
Sbjct: 809 SRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIASYDKAVELK 868
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +W RG + A LG EAI +A+E P++ + RG + A+
Sbjct: 869 PDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIAS 928
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+L +N A+ G +L ++G Y++A ++ KA++L + AW + +L
Sbjct: 929 YDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLG 988
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
++A+ + + + +A++ +G L LG++++AI + P HL WN
Sbjct: 989 RYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVE-LKPDDHLAWN 1046
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDP 412
K T+ E R K + +K+ I D L ++G+ G+ AI+ +D + +P
Sbjct: 674 KGTALEKLRKYKEALISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINP 733
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ RG + E AI+ + +A++ NP+ AW RG + LG EAI
Sbjct: 734 NDHNSWNNRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASY 793
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA+E P++ + RG + A+ V+++ ++ A+ G++L+S+G
Sbjct: 794 DKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGH 853
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y++A ++ KA++L + +W + +L E+A+ Q + ++ A++ RG
Sbjct: 854 YQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRG 913
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
L LG +++AI + P HL WN
Sbjct: 914 NSLASLGHYQEAIASYDKAVE-LKPDNHLAWN 944
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 376 SKSISVDFRLSR-GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
S VD L + G++ N G Y AI+ +D+ L +P A IG+GTA R+ + A
Sbjct: 628 SPDFVVDLYLWKLGLSLHNLGHYVEAIASYDKALNINPDDHNAWIGKGTALEKLRKYKEA 687
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ +A++ P W +G LG EAI A+ PN + + RG
Sbjct: 688 LISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLV 747
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ A+ V+++ + +A+ G +L+++G Y++A ++ KA++++ + AW
Sbjct: 748 NLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAW 807
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++A+ Q + ++ A++ RG+ L LG +++AI
Sbjct: 808 YSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAI 858
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G Y AI+ +D+ ++ P A RG++ + AI+ + +A++
Sbjct: 911 NRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELK 970
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + LG EAI +KA+E +P+ + + +G + A+
Sbjct: 971 PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIAS 1030
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+L ++ A+ G +L ++G Y++A ++ KA+ + + +A + ++ L
Sbjct: 1031 YDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLG 1090
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL L + + ++ A RG L Q++ A++DL
Sbjct: 1091 QHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDL 1133
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +K+ + D L+ RG + N G+Y AI+ +++ ++ P EA +G++
Sbjct: 959 AITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSL 1018
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A E AI+ + +A++ P AW RG + LG EAI KA++ +P+
Sbjct: 1019 ANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKA 1078
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG ++ + A+ DL+ + L + A G + + +Y+ A E + I+
Sbjct: 1079 LANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIE 1138
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+D + A G+ + Y L + AL L
Sbjct: 1139 IDPDDTWAIGYRGELYLWLHRYQAALTAFNHAL 1171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +++ ++ P A RG++ + AI+ + +A++
Sbjct: 945 NRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELK 1004
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G + A LG EAI KA+E +P+ + RG + A+
Sbjct: 1005 PDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIAS 1064
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V + ++ A G +G++++A AI L ++ A Q Y L
Sbjct: 1065 YDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQ 1124
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E ALE L + + ID + A RG L L +++ A+
Sbjct: 1125 QYETALEDLDRTIEIDPDDTWAIGYRGELYLWLHRYQAAL 1164
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G + N G+Y AI+ +D+ ++ P A RG + E AI+ + +A+
Sbjct: 1013 NQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIK 1072
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A RG LG+ +A+ DL+ A++ +P+ A + RG + + + A+ED
Sbjct: 1073 PDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALED 1132
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L +++D ++ A Y G + Y+ A A A++
Sbjct: 1133 LDRTIEIDPDDTWAIGYRGELYLWLHRYQAALTAFNHALE 1172
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +D+ + P +AL RG + + A++D AI
Sbjct: 1047 NRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLK 1106
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RGQ A L + A++DL + +E +P+ + RG + + AA+
Sbjct: 1107 PDYAWAIATRGQTYAQLQQYETALEDLDRTIEIDPDDTWAIGYRGELYLWLHRYQAALTA 1166
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEE 538
+ L+K++ S +T LAL+ I + A E
Sbjct: 1167 FNHA--LEKKSDSDWTLYCRALALALITNQELATE 1199
>gi|428209080|ref|YP_007093433.1| hypothetical protein Chro_4160 [Chroococcidiopsis thermalis PCC
7203]
gi|428011001|gb|AFY89564.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 588
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ KS S DF ++G + + G + AI+ + Q + +P Y +A RG AR Q +
Sbjct: 263 RLENPKSAS-DF-FAKGSVERDRGDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDK 320
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A++D+ +A++ +P+ A+ +R G EA+ + + PN A H RG
Sbjct: 321 QGALADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHSRGA 380
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D +D V+L+ +N AY LA + + + K A + A+ LD ++
Sbjct: 381 IRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLDPSWT 440
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + L + + A++ +V+ I+ + ++A++ RGL+ LG + AI+DL
Sbjct: 441 TVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIEDL 497
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG A+ ++G A++ +DQ LK DP Y A R + + A+S F
Sbjct: 305 DAYYQRGNARYDQGDKQGALADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRY 364
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I P+ +A+ RG R ++G+ D + + EP+++ + R + +D
Sbjct: 365 ITLVPNDAQAYHSRGAIRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKG 424
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D S + LD + Y + +G+ + A + K I ++ EA +
Sbjct: 425 ALDDFSHALNLDPSWTTVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVR 484
Query: 562 QDLANSEKALECLQ 575
+DL + + A+E LQ
Sbjct: 485 RDLGDRQGAIEDLQ 498
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + + G FD++++ +P A R AR R+ + A+ DF+ A+ +
Sbjct: 377 SRGAIRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLD 436
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS + R R LG+ A+ D SK + EP +A+ + RG+V D A+ED
Sbjct: 437 PSWTTVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIED 496
Query: 506 LSACVKLDKENKSAYTY 522
L + ++ + Y
Sbjct: 497 LQLAANIFQQKNDSTNY 513
>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
Length = 461
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 5/285 (1%)
Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S+I D S+ S++ + L + D TS + + I+ + +RL +
Sbjct: 57 SAIVDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLL 116
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+ G A + + ++ DP E+ RG QR L+ A++D+ +AI+ P +
Sbjct: 117 REAGGDLNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQ 176
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW RG G++ +AI+DLS+AL +PN RG K AV D +
Sbjct: 177 AWSDRGVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQLAKAVFDDGEAI 236
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSE 568
+LD + Y GL+L+++GEY KA + +A++L NF G +L
Sbjct: 237 RLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG--- 293
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
AL + L +D F++ Y+ R +L +G+ KKA+ D + R
Sbjct: 294 AALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALADYETALR 338
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI + L+ DP P + RG A +L A+ D EAI+ +P
Sbjct: 181 RGVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQLAKAVFDDGEAIRLDP 240
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------NSADILHERGIVNFKFKDFN 500
E + RG + AA+GE +AI D +AL P N D H +G +
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKG-------ELG 293
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
AA+ D A +KLD Y + +GE KKA + A++LD
Sbjct: 294 AALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALADYETALRLD 340
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A A+ + ++ DP PE RG + A E + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALAD 332
Query: 506 LSACVKLDKENKSA 519
++LD N +A
Sbjct: 333 YETALRLDPGNDNA 346
>gi|435851441|ref|YP_007313027.1| putative endonuclease related to Holliday junction resolvase
[Methanomethylovorans hollandica DSM 15978]
gi|433662071|gb|AGB49497.1| putative endonuclease related to Holliday junction resolvase
[Methanomethylovorans hollandica DSM 15978]
Length = 913
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 113/221 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A + G+ AI FD++++ D YP A +G A + E AI + +AI+ +
Sbjct: 647 SKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKAIEID 706
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G A ++LG EAIQ KA+E P SA I +G+ + A++
Sbjct: 707 PKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRYEEAIQA 766
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + SA+ GLALSS+G Y++A +A KAI+++ +W + L
Sbjct: 767 YDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWANTGYVLSSLG 826
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+ + + ID A+ G L G++++AI+
Sbjct: 827 KYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQ 867
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 115/222 (51%), Gaps = 2/222 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
S+G A + G+Y AI +D+ ++ +P A +G A R+ R+ E AI ++ +AI+
Sbjct: 579 SKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLGRD-EEAIQEYDKAIEI 637
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W +G A ++LG EAIQ K +E + +G+ A++
Sbjct: 638 NPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQ 697
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D + + ++ G ALSS+G Y++A +A+ KAI+++ W L
Sbjct: 698 AYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSIL 757
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++ +V+ I+ R A+ +GL L LG++++AI+
Sbjct: 758 GRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQ 799
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A G+ AI +D+ ++ DP + +G A + E AI + +AI+ N
Sbjct: 681 NKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEIN 740
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + W +G A + LG EAIQ K +E P S +G+ + A++
Sbjct: 741 PRSASIWSGKGLALSILGRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQA 800
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ ++ G LSS+G+Y++A A KAI++D AW + D
Sbjct: 801 FDKAIEVNPKSDISWANTGYVLSSLGKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAG 860
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++ V+ I+ + S +H +G L LG+ ++AI+
Sbjct: 861 RYEEAIQAFDVVIEINPKSSVIWHTKGFALRSLGREEEAIQ 901
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ FD+ ++ D M A + G A E AI F I+ NP + W
Sbjct: 826 GKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPKSSVIWHT 885
Query: 455 RGQARAALGESVEAIQDLSKALE 477
+G A +LG EAIQ +A E
Sbjct: 886 KGFALRSLGREEEAIQAFDRAKE 908
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + I E D+ + ++ AS ++ + L+ L +++ + K I I DS ++
Sbjct: 621 LGRDEEAIQEYDKAIEINPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEI-DSKYPHAW 679
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ N+ S L + I+ DKA+++DP + KG A S+LGR EEA+ ++
Sbjct: 680 D-----NKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYD 734
Query: 128 KGYE 131
K E
Sbjct: 735 KAIE 738
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + I D+++ +DS A + + L+ L +++ + KAI I D +
Sbjct: 655 LGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKAIEI-DPKFEGPW 713
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
++ F S L ++ I+ DKA++++P + KG A S LGR EEA+ ++
Sbjct: 714 -----SSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRYEEAIQAYD 768
Query: 128 K 128
K
Sbjct: 769 K 769
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ + G AI+ F++ L+ DP + A G G AI+ F +A++ +
Sbjct: 187 NQGVERYYAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEID 246
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW G ALG + EAI KALE +P H GI + A+
Sbjct: 247 PKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAA 306
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + A+ LG AL+++G +A A KA+++D F AW L DL
Sbjct: 307 FEKALEIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLG 366
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ ++ L ID +F A+H G +L+ LG++ +AI
Sbjct: 367 RYSEAIAAFEKALEIDPKFHFAWHGLGNVLNALGRYSEAI 406
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 137/315 (43%), Gaps = 14/315 (4%)
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
H + A LND NSE+ + + E K W L T N RN +
Sbjct: 216 HHAWNGLGAPLNDLGRNSEAIAAFE-------KALEIDPKEHIAWHGLGITLNALGRNSE 268
Query: 368 FCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
+ K+ I ++ GI G+ + AI+ F++ L+ DP A G G A
Sbjct: 269 -AIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKAHIAWKGLGNA 327
Query: 425 -RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A R EA I+ F +A++ +P AW G LG EAI KALE +P
Sbjct: 328 LNALGRNSEA-IAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKFH 386
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
H G V ++ A+ +++D + A+ LG AL +G Y +A A+ KA
Sbjct: 387 FAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKA 446
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHK 602
+++D F AW L + L + +A+ + L I +F +A+ RG L LG++
Sbjct: 447 LEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEITGNQFWQAWANRGSALFYLGRYS 506
Query: 603 KAIKDLSSGSRTMMP 617
+AI++ G + P
Sbjct: 507 EAIQNWDEGLQKYQP 521
>gi|451819922|ref|YP_007456123.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785901|gb|AGF56869.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 759
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T I+ +K+ V +G+ G+ AI +++ ++ P Y E +G +
Sbjct: 515 TDINNAKAYFV-----KGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNILQDLGQ 569
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI + +AI+ NP +A+ +G A LG++ EAI+ KA E P+ + + +G
Sbjct: 570 NEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKG 629
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ ++L + +AY G AL ++G+ ++A E + KAI+L ++
Sbjct: 630 TALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQNEEAIECYDKAIELSPDY 689
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ A+ + Q+L +E+A+EC + + ++ ++KAY+ +G L LG+++KA
Sbjct: 690 VNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAKAYYNKGNALKILGKNEKA 743
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F S+ + NE Y + ++I+ D +A +G + E AI + +AI
Sbjct: 490 FNESKRLLDNNE--YTKLLEKSNEIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAI 547
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P E + +G LG++ EAI+ KA+E P+ + +G A
Sbjct: 548 ELKPDYAEVYNNKGNILQDLGQNEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEA 607
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E +L + +AY G AL ++G+ ++A + KAI+L +++ A+ + +
Sbjct: 608 IECYDKAKELSPDYVNAYYNKGTALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALK 667
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L +E+A+EC + + + + AY+ +G +L LGQ+++AI+
Sbjct: 668 NLGQNEEAIECYDKAIELSPDYVNAYNNKGNVLQNLGQNEEAIE 711
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
DKA++L+P ++AY KG A LG+ EEA+ ++K E
Sbjct: 578 DKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKE 616
>gi|354565547|ref|ZP_08984721.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353548420|gb|EHC17865.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 279
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
K+ RI ++ + D ++G+ + N+G AI+ F + DP A + RG R
Sbjct: 34 KQITSPRIEQAATTKADDFYNQGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTR 93
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI DFT AI+ NP A+ RG +R LG S AIQD ++A+ +PN A
Sbjct: 94 YDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALA 153
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ED S ++L+ + AY G G++K A E + +A++
Sbjct: 154 YYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVR 213
Query: 546 LDRNFLEAWGH 556
L+ N EA+ +
Sbjct: 214 LNPN--EAFAY 222
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 8/213 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q +LE AI+ F+ AI +P+ A+ RG R LG+ AI+D + A+ P
Sbjct: 55 QGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTRYDLGDKQGAIEDFTAAIRLNP 114
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
RG + + +A++D + + LD AY GLA + +G+ K A E +
Sbjct: 115 RDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALAYYNRGLARNDLGDKKGALEDY 174
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
AI+L+ N A+ + + + A+E Q + ++ + AY+ RG+ +
Sbjct: 175 STAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVRLNPNEAFAYYNRGVTRYNQAD 234
Query: 601 HKKAIKD--------LSSGSRTMMPHLIWNLTR 625
+ AI+D L G+ T ++ LT+
Sbjct: 235 YFGAIEDFEKAADLFLRQGNTTQYQQVLELLTK 267
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + + G AI F ++ +P P A + RG +R ++AI D+ AI
Sbjct: 87 VNRGYTRYDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINL 146
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG AR LG+ A++D S A+ PN A RG V + D A+E
Sbjct: 147 DPNYALAYYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIE 206
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V+L+ AY G+ + +Y A E KA L FL G+ TQ+ Q L
Sbjct: 207 DYNQAVRLNPNEAFAYYNRGVTRYNQADYFGAIEDFEKAADL---FLR-QGNTTQYQQVL 262
>gi|145516292|ref|XP_001444040.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411440|emb|CAK76643.1| unnamed protein product [Paramecium tetraurelia]
Length = 681
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 1/234 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ S+G + + AI + L +P + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHSQGFEARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD+T+AI+ + A+ RG + G+ AI+D +K++E +P+ AD H +G K
Sbjct: 324 SDYTKAIELDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +G++ KA++ +L A + N
Sbjct: 384 KNLIKEAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
H+ E+AL+ L ID+ ++ AY+ RGL+ +G+ +KA +D +
Sbjct: 444 HIGILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFN 497
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K A+ F+ LK D Y A GRG E E A DF +AI+ P
Sbjct: 446 GILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQ 505
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
RG + ++ + EA++D KAL + + I G+V K +DF A S
Sbjct: 506 NPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAAYCYS 565
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +EN G L+ +G++ +A + KAI+LD + A + + +
Sbjct: 566 QELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKLDPVNIHAIYNRGICNERIGEF 625
Query: 568 EKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
KA+E QV+++ + + + AY RG +G+ AI D S
Sbjct: 626 RKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIGEMDLAIADYS 668
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 129/618 (20%), Positives = 246/618 (39%), Gaps = 109/618 (17%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY---E 131
RA Y + ++ I+DC+K L+ D + Y L+GCA LG+ + A+ + K E
Sbjct: 48 RASAYIKKGEYQTAIQDCNKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDE 107
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMS-SLTVSESGLNANDKMSETSE 190
+ ++ + L L+ A +D + E D + S++ S ++++ L N M + E
Sbjct: 108 NHVNAAFARASCLNLKGDFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKK-DE 166
Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREV 250
+ K+D +++ + + DL N ++DE ++ ++
Sbjct: 167 PYPKTDAFQFTTKKNKYQQ-----PEEDDLMNPQNDEE-------------YLQNDQSQI 208
Query: 251 SENHNGSSDGSKST-HASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
+S S++ + S DA+E+N Q IDK ++
Sbjct: 209 QNQPQQTSFMSQNPLYTSIDANELNIQRPSQI------IDK---------------EISQ 247
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK------LSFKWDMLKETSNEAK 363
+ S+ N +++ ISD S E+R K + F L N K
Sbjct: 248 PMQQQLISMIPENIKNDN---KKISDWFHSQGFEARKKEDFIKAIEFYTMALMFNPNHFK 304
Query: 364 R--NKKFCVTRI--------SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQIL 408
N+ F ++ +K+I +D + +RGI+ +G Y AI F + +
Sbjct: 305 SIFNRGFAFDKLRMYNDAISDYTKAIELDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSI 364
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ DP + +G A + ++ AI +F E I+ + + +A+ R LG+ +A
Sbjct: 365 ELDPSKADFYHNKGFAMKKKNLIKEAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKA 424
Query: 469 IQD----------------------------------LSKALEFEPNSADILHERGIVNF 494
QD + +L+ + N A + RG+V
Sbjct: 425 QQDYLIANNVVPNNPNTLTHIGILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFD 484
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K +F A +D + ++++ +N G S+ ++++A E KA+ LD +
Sbjct: 485 KIGEFEKACQDFNKAIEIEPQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIY 544
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR- 613
++ + + + E A C Q L + ++ + RG L LGQ +AI D + +
Sbjct: 545 SNMGLVLRKMEDFETAAYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKL 604
Query: 614 -TMMPHLIWNLTRWRNLC 630
+ H I+N R +C
Sbjct: 605 DPVNIHAIYN----RGIC 618
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--- 443
RG+ G++ A F++ ++ +P P + RG + + E A+ DF +A+
Sbjct: 479 RGLVFDKIGEFEKACQDFNKAIEIEPQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLDS 538
Query: 444 SNP-----------------SAGEAWKR--------------RGQARAALGESVEAIQDL 472
NP +A + + RG A LG+ EAI D
Sbjct: 539 KNPIIYSNMGLVLRKMEDFETAAYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIADY 598
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAYTYLGLALSSIG 531
+KA++ +P + ++ RGI N + +F A+ED S + L + + +AY G +IG
Sbjct: 599 TKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIG 658
Query: 532 EYKKAEEAHLKAIQLD 547
E A + KA+++D
Sbjct: 659 EMDLAIADYSKALEID 674
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-S 444
+RG G++ AI+ + + +K DP+ A+ RG E AI DF++ I
Sbjct: 580 NRGYCLAKLGQFDEAIADYTKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQ 639
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
N A+ RG +GE AI D SKALE + ++ +
Sbjct: 640 NDQGANAYFNRGCCYDNIGEMDLAIADYSKALEIDNKTSKV 680
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
L++ +Q KY +I+I + I LK P + +AL R +A + E + AI D
Sbjct: 6 LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
+ ++++ + RG A LG+ AI+D SK L + N + R +N K
Sbjct: 66 NKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124
Query: 498 DFNAAVEDLSACVKLD 513
DF A+ED + ++ D
Sbjct: 125 DFAGAIEDYTRALEKD 140
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T +++ P+ +A R A GE AIQD +K LE + + + RG N K
Sbjct: 32 TGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDCNKLLETDGENVGGYYLRGCANEKLGQ 91
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ A+ED S + LD+ + +A L+ G++ A E + +A++ D
Sbjct: 92 IDLAIEDFSKVLSLDENHVNAAFARASCLNLKGDFAGAIEDYTRALEKD 140
>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 579
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 113/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG EGK+ +A + + ++ +P + +A RG R +AA+ D+T+A++ +
Sbjct: 228 ARGFQYRQEGKFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMD 287
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG + G+ A+ D ++A+E P +AD H RG + K +F A+ D
Sbjct: 288 PHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIAD 347
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ + + + + +G Y++A + + A++++ A+ + Y +
Sbjct: 348 YSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMR 407
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++ +A+ + + + R +Y+ RGL LG+H++A++D +
Sbjct: 408 DTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFA 451
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG ++ +A+ + Q LK DP AL RG + + + A++DFT AI+
Sbjct: 261 FNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIEL 320
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ + + RG G AI D S+A+EF PN L+ R K + A +
Sbjct: 321 LPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQ 380
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A ++++ EN +AY G + + +A +AI L + ++ Y L
Sbjct: 381 DYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQL 440
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++AL+ L +D R + YH RG L +G+ ++A++D SS
Sbjct: 441 GRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSA 487
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A + L+ +P A RG+ R+ AI+DF AI P + ++
Sbjct: 373 GRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNS 432
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG EA+QD + AL +P SA H RG F AV+D S+ + L+
Sbjct: 433 RGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEP 492
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +AY G AL + +++A + A+ +D + + + E+A+
Sbjct: 493 RNVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADY 552
Query: 575 QQVLYIDKRFSKAYHLRGLL 594
Q+L +D + S + H R +L
Sbjct: 553 SQILTLDPQNSYSRHNRAIL 572
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 315 SASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS 374
+A+L N+ +Y + +K D+T + + + L+ S + ++ C ++
Sbjct: 383 TAALRVEPENANAYHNRGSTYDKMRDTTRAIADFD-RAIALQPRSVSSYNSRGLCYDQLG 441
Query: 375 KSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+ + DF L+ RG N G++ A+ + L +P A R
Sbjct: 442 RHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNNR 501
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A R + A++D+T A+ +P R + A + EAI D S+ L +P
Sbjct: 502 GYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYSQILTLDPQ 561
Query: 482 SADILHERGIVNFKFK 497
++ H R I+ K K
Sbjct: 562 NSYSRHNRAILTAKMK 577
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P + L+ RG A Q + I D TE + + S A RG A + LG+
Sbjct: 58 LVREPKDVKVLLARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQL 117
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AI+D S+ L+ P + + R DF A++D +
Sbjct: 118 AIRDFSRTLQINPEHVNAAYARASCYNSQGDFVRAIDDYN 157
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 49 LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+R+ ++AI D +A Q + +R CY QL H+ ++D AL LDP Y
Sbjct: 406 MRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYH 465
Query: 108 LKGCAFSALGRKEEALSVW 126
+G +GR EEA+ +
Sbjct: 466 NRGYCLRNMGRFEEAVQDY 484
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 22/247 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + Y I +++ D AL RG A + +++ AI DF+ +Q
Sbjct: 69 LARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQLAIRDFSRTLQI 128
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKA------LEFEPNSADILHERGIVNFKFKD 498
NP A R + G+ V AI D + A L+ + LH + +
Sbjct: 129 NPEHVNAAYARASCYNSQGDFVRAIDDYNCALLKDKKLKLQQKQQQELHRSANLTRQQLQ 188
Query: 499 FNAAVEDLSACVKLDKENKSA-------YTYL---------GLALSSIGEYKKAEEAHLK 542
E +S + L + K A ++ L G G+++ A + + +
Sbjct: 189 RQKQDESVSNTLVLSQRMKKAPISGTNNFSALDQAEVHHARGFQYRQEGKFQAAADEYSR 248
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQL+ +A+ + Y + + A+E Q L +D + A + RG+ L G ++
Sbjct: 249 AIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQ 308
Query: 603 KAIKDLS 609
A+ D +
Sbjct: 309 GALTDFT 315
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP +L RG FK +++ ++DL+ V LD N +A GLA S +G+ + A
Sbjct: 61 EPKDVKVLLARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQLAIR 120
Query: 539 AHLKAIQLDRNFLEA 553
+ +Q++ + A
Sbjct: 121 DFSRTLQINPEHVNA 135
>gi|166365168|ref|YP_001657441.1| hypothetical protein MAE_24270 [Microcystis aeruginosa NIES-843]
gi|425465366|ref|ZP_18844675.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
gi|166087541|dbj|BAG02249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
gi|389832406|emb|CCI24007.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
Length = 260
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLE-AWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G + +A E + KA+ L DR F A H E AL + L I+
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFYNRALAH-----NRAGQQEMALRDYNESLKINAN 204
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
F++AYH RGL + LG +KAI DL +R +
Sbjct: 205 FAEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L + Y AL R ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYT 160
>gi|126655454|ref|ZP_01726893.1| TPR repeat [Cyanothece sp. CCY0110]
gi|126622933|gb|EAZ93638.1| TPR repeat [Cyanothece sp. CCY0110]
Length = 391
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + +GK AI+ + + ++ P +P+A RG A Q++ E AI+DFT+AI+ N
Sbjct: 171 NRAMIYEGQGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVN 230
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + LG+ A+ D K ++ EPN + + RG + + K +N A+ D
Sbjct: 231 PNYASAYGNRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSD 290
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++L+ + +SAY GL S ++ A + KAI+L+ NF AW +
Sbjct: 291 FDKAIQLNPDYESAYYNRGLVYSRQQKHDLAIADYTKAIELNSNF--AWAYF 340
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 12/290 (4%)
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
S Y S+ N+ SD R K + + + E + +K+ + S +++I+++
Sbjct: 44 SYPYEPSNRQQNEPSD----RQKEAITY---YKQGGEYLKQEKWDLAISSYNQAITLEPT 96
Query: 385 L-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
L +RG+ N+GK A++ + + ++ P Y A R Q++L A++D+
Sbjct: 97 LLEAYNNRGVVYQNQGKLDLAVADYTKAIELSPNYASAYQNRAIVYHKQQQLPLALADYN 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I P A+ R G+ AI D +KA++++P H RGI +
Sbjct: 157 KLIDLAPDNAIAYNNRAMIYEGQGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKP 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + ++++ SAY GL S +G++ A + K IQL+ N + +
Sbjct: 217 ELAIADFTKAIEVNPNYASAYGNRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y AL + + ++ + AY+ RGL+ +H AI D +
Sbjct: 277 LYAQQKKWNLALSDFDKAIQLNPDYESAYYNRGLVYSRQQKHDLAIADYT 326
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q +L+ AI+D+T+AIQ P +A+ RG A + AI D +KA+E PN A
Sbjct: 179 QGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVNPNYASAYG 238
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ + +N A+ D ++L+ + Y G + ++ A KAIQL+
Sbjct: 239 NRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSDFDKAIQLN 298
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
++ A+ + Y + A+ + + ++ F+ AY RG
Sbjct: 299 PDYESAYYNRGLVYSRQQKHDLAIADYTKAIELNSNFAWAYFNRG 343
>gi|390441644|ref|ZP_10229686.1| Mom72 protein [Microcystis sp. T1-4]
gi|389835062|emb|CCI33812.1| Mom72 protein [Microcystis sp. T1-4]
Length = 260
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ L PN + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHAEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R A ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG EAI+D +KAL + I + R + +
Sbjct: 128 AITLNGNFADFFIYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + + + ++ N++ A G+ Y E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHAEAIEDYT 160
>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
Length = 708
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 135/277 (48%), Gaps = 23/277 (8%)
Query: 368 FCVTRISKSKSISVDFRLS--RGIAQVNEG-------KYASAISIFDQILKEDPMYPEAL 418
+ ++ +S+D+ LS N+G +Y A+ +D L +P A
Sbjct: 310 LAIIGLAAGGVVSIDYWLSLNNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAW 369
Query: 419 IGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
G+G T +A +R + A+ + EAIQ P + +AW RG+ LG ++EAI K +
Sbjct: 370 QGKGDTLQALKR-YQQALDSYDEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVII 428
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+ NS + G + K ++ A++DL +KL+ +N+ A+ G +L ++ +Y+ A
Sbjct: 429 FKDNSWEAWSNLGELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAI 488
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+++ + ++++ +F +AW Y +L +A E + + +A++ +G+ L+
Sbjct: 489 KSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNR 548
Query: 598 LGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAW 634
L ++++A+K ++ ++L F AW
Sbjct: 549 LNRYEEALKTFEKATQV------------QSLSFEAW 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G +V +Y+ AI ++ LK +P EA +G + ++ E AI + E ++ N S
Sbjct: 441 GELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSS 500
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW ++G L + EA ++ +KA++F+P+ + +GI + + A++
Sbjct: 501 FSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFE 560
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ + A+ L + Y +A A+ AI+L +AW + +
Sbjct: 561 KATQVQSLSFEAWYQKAWTLHILKRYAEAVSAYTTAIRLRPRDQQAWYNKANSLYNFGEY 620
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+A +QV+ + K + A+ G L L ++++AI + R
Sbjct: 621 EEATAAYKQVIALQKDYYPAWKSLGNSLLKLERYQEAINAYNQALR 666
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N KY AI +D+ +K + + +A +G + A ++ +A+Q P
Sbjct: 474 KGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQP 533
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G A L EA++ KA + + S + +++ K + AV
Sbjct: 534 DLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAVSAY 593
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L ++ A+ +L + GEY++A A+ + I L +++ AW L L
Sbjct: 594 TTAIRLRPRDQQAWYNKANSLYNFGEYEEATAAYKQVIALQKDYYPAWKSLGNSLLKLER 653
Query: 567 SEKALECLQQVL 578
++A+ Q L
Sbjct: 654 YQEAINAYNQAL 665
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L+ + AI+ D ++ S Q + Y LE + + KA+Q P L Q
Sbjct: 478 LQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQ 537
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
A+ +G A + L R EEAL +EK
Sbjct: 538 AWYSQGIALNRLNRYEEALKTFEKA 562
>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 434
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF++ G +++ Y AI F +++ +P EA RG AR+ ++ AI D+ +A
Sbjct: 47 DFQI--GQSKLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKA 104
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NP + RG A G+S A++D +KA+ P A+ RG + + +D+
Sbjct: 105 ISLNPKEARYYNNRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRR 164
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++LD +N +AY G+ LS++G +++ E +AI+LD + A+ +
Sbjct: 165 ALADHNQALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVR 224
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L + +E L + +D K Y R + G++++AI + S
Sbjct: 225 YLLGSYSGVIEDLNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYS 272
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I+++ ++S RG+A+ Y AI +++ + +P RG A +
Sbjct: 68 SKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNRGLALHRSGD 127
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++A+ D+ +AI NP EA+ RG R L + A+ D ++AL +P +A + RG
Sbjct: 128 SKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPKNATAYNNRG 187
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +F +ED ++LD AY G+ +G Y E ++ LD +
Sbjct: 188 VTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSE 247
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++ +G+ + + ++A++ QV+ + + AY+ RG+ +G ++AI D
Sbjct: 248 IKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQ 307
Query: 611 GSRTMMPHLI---WNLTRWRNLCFNA----WPF 636
+ + P L+ +++ RN NA PF
Sbjct: 308 AT-NLNPRLLITNFDVLLGRNPLKNAEAILQPF 339
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 5/239 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+IS++ +L+ RG + Y A++ +Q L+ DP A RG +
Sbjct: 136 NKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPKNATAYNNRGVTLSNLGN 195
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ + DF AI+ +PS A+ RG R LG I+DL+++ +P+ R
Sbjct: 196 FQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSEIKPYGNRA 255
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V + + A+++ S ++ + AY G+ + IG +++A + +++A L+
Sbjct: 256 TVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRL 315
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L + L N+E L+ Q + + S AYH RG + + L ++ AI+D +
Sbjct: 316 LITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYT 374
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQ++ + AI + SK + P ++ + RG+ KD+ A+ED + + L+ +
Sbjct: 51 GQSKLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPK 110
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y GLAL G+ K A E + KAI L+ EA+ + +L + +AL
Sbjct: 111 EARYYNNRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHN 170
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q L +D + + AY+ RG+ L LG ++ ++D R
Sbjct: 171 QALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIR 208
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI + Q+++ P A GRG A + AI D+ +A NP
Sbjct: 262 GRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRLLITNFD 321
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R L + +Q ++A++ P S+ H RG + ++ KD+ A+ED + ++ D
Sbjct: 322 VLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYTLAIRFDN 381
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+A +G+ K+ +A L+ + L Q +D A ++AL L
Sbjct: 382 NYALAYNNRGVARYQVGD-KQGAKADLQQAVI----------LFQQQKDAAKVQQALAVL 430
Query: 575 QQV 577
+
Sbjct: 431 NTI 433
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 117/291 (40%), Gaps = 68/291 (23%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G SA+ +++ + +P EA RG R R+ A++D +A++ +
Sbjct: 117 NRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLD 176
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + LG E ++D +A+ +P+ A + RGIV + ++ +ED
Sbjct: 177 PKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIED 236
Query: 506 LSACVKLD--------------------------------KENKSAYTYLGLAL--SSIG 531
L+ LD ++ K A+ Y G + + IG
Sbjct: 237 LNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIG 296
Query: 532 EYKKAEEAHLKAIQLD-------------RNFLE-AWGHLTQFYQ--------------- 562
+++A + +++A L+ RN L+ A L F Q
Sbjct: 297 SFQQAIDDYIQATNLNPRLLITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNR 356
Query: 563 -----DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L + A+E + D ++ AY+ RG+ + +G + A DL
Sbjct: 357 GNIRYQLKDYRGAIEDYTLAIRFDNNYALAYNNRGVARYQVGDKQGAKADL 407
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++KAI L+ LA++Y NR F +L ++ + D ++AL+LDP AY
Sbjct: 130 SALEDYNKAIS-LNPKLAEAY-----TNRGFIRDELRDYRRALADHNQALRLDPKNATAY 183
Query: 107 ILKGCAFSALGRKEEALSVWEK 128
+G S LG +E L +E+
Sbjct: 184 NNRGVTLSNLGNFQEGLEDFER 205
>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 732
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A G + +AI+ +Q+++ +P +A RG A Q
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P EA++ RG A G + D ++A+ P SA + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + Y ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633
Query: 605 IKDLS 609
I D S
Sbjct: 634 IADYS 638
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI F +IQ P
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPD 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + DF A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA + Y+ A + + I+ + EA+ + N
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + + + ++ + + AY+ RG LG ++ A+ D
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALAD 535
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + + L RG+ ++ G +AI F++ ++ P EA R A ++ E
Sbjct: 335 LNRPDPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYE 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A +G+ AI DL++ + P D ++RG+
Sbjct: 395 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ ++ AY G A G + + +AI+L+
Sbjct: 455 HYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAA 514
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S
Sbjct: 515 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 571
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG +AI D ++A+ PN A + RG+V D A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704
Query: 506 LSACVKL 512
KL
Sbjct: 705 FEQAGKL 711
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 67/140 (47%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P ++ +RG+ + D AA++ + ++L +N A+ A + +Y++A
Sbjct: 339 DPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIA 398
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI+LD + + + + Y + + A+ L QV+ ++ + A++ RGL +
Sbjct: 399 DYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQ 458
Query: 599 GQHKKAIKDLSSGSRTMMPH 618
++ AI D + R H
Sbjct: 459 ENYEAAILDYTEVIRRQPDH 478
>gi|409994049|ref|ZP_11277171.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
gi|409935123|gb|EKN76665.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
Length = 732
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A G + +AI+ +Q+++ +P +A RG A Q
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P EA++ RG A G + D ++A+ P SA + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + Y ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633
Query: 605 IKDLS 609
I D S
Sbjct: 634 IADYS 638
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI F +IQ P
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPD 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + DF A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA + Y+ A + + I+ + EA+ + N
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + + + ++ + + AY+ RG LG ++ A+ D
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALAD 535
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + + L RG+ ++ G +AI F++ ++ P EA R A ++ E
Sbjct: 335 LNRPDPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYE 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A +G+ AI DL++ + P D ++RG+
Sbjct: 395 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ ++ AY G A G + + +AI+L+
Sbjct: 455 HYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAA 514
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S
Sbjct: 515 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 571
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG +AI D ++A+ PN A + RG+V D A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704
Query: 506 LSACVKL 512
KL
Sbjct: 705 FEQAGKL 711
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 67/140 (47%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P ++ +RG+ + D AA++ + ++L +N A+ A + +Y++A
Sbjct: 339 DPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIA 398
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI+LD + + + + Y + + A+ L QV+ ++ + A++ RGL +
Sbjct: 399 DYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQ 458
Query: 599 GQHKKAIKDLSSGSRTMMPH 618
++ AI D + R H
Sbjct: 459 ENYEAAILDYTEVIRRQPDH 478
>gi|145530013|ref|XP_001450788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418413|emb|CAK83391.1| unnamed protein product [Paramecium tetraurelia]
Length = 652
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + KY AI +++ + +P Y A +G A + + + AI +AI N
Sbjct: 22 NKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWALCYLNKFQEAIECNNKAIAIN 81
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW+ +G A L + EAI+ KA+ P H +G + A+E
Sbjct: 82 PKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSAWHSKGQALEDQNKYQEAIEC 141
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + A+ G AL ++ +Y+KA + + KAI ++ + AW + +L
Sbjct: 142 YDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIVINPKYDSAWHNKGSALCNLN 201
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N ++A++C + + I+ ++ A+H +G L+ L ++++AIK
Sbjct: 202 NYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIK 242
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +D+ + +P A +G+A + + AI + +AI NP AW +G A
Sbjct: 2 AIECYDKSIAINPNEDSAWHNKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWAL 61
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + EAI+ +KA+ P +G K + A++ + ++ + SA
Sbjct: 62 CYLNKFQEAIECNNKAIAINPKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSA 121
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G AL +Y++A E + KAI ++ + AW Q +L +KA++C ++ +
Sbjct: 122 WHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIV 181
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
I+ ++ A+H +G L L +++AIK
Sbjct: 182 INPKYDSAWHNKGSALCNLNNYQEAIK 208
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 10/291 (3%)
Query: 317 SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS 376
+LN +E Y K+ I+ N DS++ + + D++K+ +K + S
Sbjct: 274 NLNKYQEANECYDKA-IAINPKYDSSQFNKGQALE-DLIKDQGAIQSYDKATAINPKYDS 331
Query: 377 KSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S S F + Q+ E + Y AI+I +P Y +G+ + + AI
Sbjct: 332 SSQSNGFCIQDLNKQLEEIECYIKAIAI-------NPKYDSTWHNKGSELHKLNKYQEAI 384
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ +AI NP+ W G A L + EAIQ KA+ + + +G+ +
Sbjct: 385 ECYNKAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYN 444
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+E + + ++ + A+ G AL ++ +Y++A E + KAI ++ + AW
Sbjct: 445 LNKYQEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYASAWN 504
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ D ++A+EC + + ++ ++ A+H +G LH L + +AI+
Sbjct: 505 NKGLALDDQNKYQEAIECYDKAMAVNPKYDGAWHNKGFALHKLNKFSEAIE 555
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A K+ AI ++ + +P Y A +G+A + + AI + +AI N
Sbjct: 56 NKGWALCYLNKFQEAIECNNKAIAINPKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAIN 115
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +GQA + EAI+ KA+ H +G + + A++
Sbjct: 116 PKYDSAWHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQC 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + SA+ G AL ++ Y++A + + KAI ++ + AW + L
Sbjct: 176 YEKAIVINPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLN 235
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++A++C + +Y++ ++ A+H G+ H LG
Sbjct: 236 KYQEAIKCYDKAIYMNPKYDSAWHKMGIRNHYLG 269
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A N KY A +D+ + +P Y + +G A + + AI + +A NP
Sbjct: 269 GWALENLNKYQEANECYDKAIAINPKYDSSQFNKGQALEDLIKDQGAIQSYDKATAINPK 328
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G L + +E I+ KA+ P H +G K + A+E +
Sbjct: 329 YDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKGSELHKLNKYQEAIECYN 388
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + S + + G AL ++ +Y++A + + KAI ++ EA + +L
Sbjct: 389 KAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYNLNKY 448
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+EC + + I+ ++ A++ +G L L ++++AI+
Sbjct: 449 QEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIE 487
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 41/262 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N Y AI +D+ + +P Y A +G A + + AI + +AI N
Sbjct: 192 NKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKCYDKAIYMN 251
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----------------FEPNSA--DILH 487
P AW + G LG ++E + +A E F A D++
Sbjct: 252 PKYDSAWHKMGIRNHYLGWALENLNKYQEANECYDKAIAINPKYDSSQFNKGQALEDLIK 311
Query: 488 ERGIVN--------------------FKFKDFNAAVEDLSACVK---LDKENKSAYTYLG 524
++G + F +D N +E++ +K ++ + S + G
Sbjct: 312 DQGAIQSYDKATAINPKYDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKG 371
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L + +Y++A E + KAI + N W H +L ++A++C + + I+ +
Sbjct: 372 SELHKLNKYQEAIECYNKAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKL 431
Query: 585 SKAYHLRGLLLHGLGQHKKAIK 606
++A + +GL L+ L ++++AI+
Sbjct: 432 NEAQNNKGLALYNLNKYQEAIE 453
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 368 FCVTRISKS--------KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMY 414
FC+ ++K K+I+++ + ++G KY AI +++ + +P
Sbjct: 338 FCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKGSELHKLNKYQEAIECYNKAISFNPNQ 397
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
G+A + + AI + +AI N EA +G A L + EAI+ +K
Sbjct: 398 DSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYNLNKYQEAIECFNK 457
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ P + +G + A+E + ++ + SA+ GLAL +Y+
Sbjct: 458 AIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYASAWNNKGLALDDQNKYQ 517
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR-------FSKA 587
+A E + KA+ ++ + AW + L +A+EC + + I+ + K
Sbjct: 518 EAIECYDKAMAVNPKYDGAWHNKGFALHKLNKFSEAIECYVKAIAINPKDDSSWNNQGKQ 577
Query: 588 YHLRGLLLHGLGQHKKAI 605
+ GL LH L + K AI
Sbjct: 578 LYYSGLALHKLQKFKDAI 595
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 211/524 (40%), Gaps = 81/524 (15%)
Query: 14 NKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDIC 73
NK + I D+ + ++S A ++ + L +L + KAI+ + + + +
Sbjct: 133 NKYQEAIECYDKAIAINSKYDCAWHSKGQA--LYNLNQYQKAIQCYEKAIVINPKYDSAW 190
Query: 74 -NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG--- 129
N+ L ++ I+ DKA+ ++P A+ KG A L + +EA+ ++K
Sbjct: 191 HNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKCYDKAIYM 250
Query: 130 ---YEHALHQSA-----------DLKQFLELEELLTAA-----KQDRSVTCEYDVSNSMS 170
Y+ A H+ +L ++ E E A K D S +++ ++
Sbjct: 251 NPKYDSAWHKMGIRNHYLGWALENLNKYQEANECYDKAIAINPKYDSS---QFNKGQALE 307
Query: 171 SLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVS-ETCSKSSHDPD-LCNGRSDEA 228
L + + + DK + + + DSSSQS + +K + + +
Sbjct: 308 DLIKDQGAIQSYDKATAINPKY------DSSSQSNGFCIQDLNKQLEEIECYIKAIAINP 361
Query: 229 KGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPI 288
K S+ S LH K +E E +N + S + ++D++ + S+ +CN
Sbjct: 362 KYDSTWHNKGSELHKLNKYQEAIECYNKAI----SFNPNQDSTWYHTGSA----LCNLNK 413
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK- 347
+ ++ +DK S + LN++ N + + NK ++ E +K
Sbjct: 414 YQEAI------------QCYDKAISINHKLNEAQNNK---GLALYNLNKYQEAIECFNKA 458
Query: 348 --LSFKWDMLKETSNEAKRN-KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYAS 399
++ K+D+ A N K+ K+I+++ + + +G+A ++ KY
Sbjct: 459 IAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYASAWNNKGLALDDQNKYQE 518
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +D+ + +P Y A +G A + AI + +AI NP +W +G+
Sbjct: 519 AIECYDKAMAVNPKYDGAWHNKGFALHKLNKFSEAIECYVKAIAINPKDDSSWNNQGKQL 578
Query: 460 AALGESVEAIQDLSKA---------LEFEP----NSADILHERG 490
G ++ +Q A L+ P N AD L E G
Sbjct: 579 YYSGLALHKLQKFKDAISCFDQALNLKITPQRLKNKADSLFEFG 622
>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 379
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ G+Y A+ +++ LK +P Y A +
Sbjct: 72 CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A+Q NP +AW +G L + +A++ KA+E P +
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI K + A++ ++L+ ++ A+ GL + +G Y ++ E + KA+Q++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + +L E+ALEC ++ L ID K ++ +GL+L LG++K A+
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDAL 308
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 121/240 (50%), Gaps = 8/240 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ +P +A +G+ + ++ + A+ F +AI+ NP AW
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EA++ K L+ P + +G+V + ++ ++E ++++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+ LS +G Y++A E + KA+++D + W + ++L + ALEC
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSSGSRTMMPHLIWNLTRWR 627
Q+ L I+ F+ A+ +G++L L + +KKA+K L+ + M H N T+ R
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALK-LNPPKQNTMVHARKNTTKTR 370
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ L+ G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G LG EA++ KAL+ P A + + +V + ++ A
Sbjct: 78 KNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++ + A+ G L + +YKKA + KAI+L+ AWG
Sbjct: 138 LECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLH 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+AL+C +VL ++ + KA++ +GL+ + LG++ +++
Sbjct: 198 NLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESL 240
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ G+Y ++ +++ L+ +P EA +G + E A+ + +A++ +
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEID 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P + W +G LG+ +A++ KALE P AD +GI+
Sbjct: 285 PEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGII 331
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ +++L + + +KALQ++P L +A+ KG S LGR EEAL +EK E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
K++ ++ +L+ +G+ G+Y A+ +++ L+ DP + +G +
Sbjct: 244 EKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGK 303
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-ILHER 489
+ A+ F +A++ NP +AWK +G L + E+++ KAL+ P + ++H R
Sbjct: 304 YKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMVHAR 363
>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 565
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N G++ I+ +++ L+ P Y +A RG A LE AI+ + +A++
Sbjct: 105 NRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASYDKALEFK 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI K LEF+P+ + + RGI + A+
Sbjct: 165 PDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIAS 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G ++A + KA++ ++ EAW + +L
Sbjct: 225 FDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLG 284
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RG+ L LG+ ++A+
Sbjct: 285 RLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEAL 324
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + + FD+ L+ P P+A RG A E AI+ + +A++ P EAW
Sbjct: 13 GLFEKGRAFFDETLEMKPE-PQACYDRGVALGNSGRWEEAIASYDKALEFKPDYHEAWNN 71
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG EAI KALEF+P+ + RGI + + + +++
Sbjct: 72 RGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKP 131
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL ++G ++A ++ KA++ ++ EAW + +L E+A+
Sbjct: 132 DYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASY 191
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++VL + +A++ RG+ L LG+ ++AI
Sbjct: 192 EKVLEFKPDYHEAWNNRGITLGNLGRWEEAI 222
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G++ AI+ +D+ L+ P Y EA RG A E AI+ F +A++ P
Sbjct: 38 RGVALGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASFDKALEFKP 97
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG LG E I +K LE +P+ + RGI A+
Sbjct: 98 DDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASY 157
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + A+ G AL ++G +++A ++ K ++ ++ EAW + +L
Sbjct: 158 DKALEFKPDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGR 217
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RG L LG+ ++AI
Sbjct: 218 WEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAI 256
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 18/246 (7%)
Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ +K+ I D+ +RGIA N G AI+ +D+ L+ P Y EA RG A
Sbjct: 120 IASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALG 179
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
E AI+ + + ++ P EAW RG LG EAI KALEF+ + +
Sbjct: 180 NLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAW 239
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG A+ ++ + A+ G AL ++G ++A + KA++
Sbjct: 240 NNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEF 299
Query: 547 DRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++ +AW G L + + LA+ +KALE K +A++ RG+ L LG
Sbjct: 300 KADYHQAWNNRGITLGKLGRLEEALASYDKALEI--------KPDDEAWYNRGIALGKLG 351
Query: 600 QHKKAI 605
+ ++A+
Sbjct: 352 RWEEAL 357
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ FD+ L+ P A RG E I+ + + ++
Sbjct: 71 NRGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIK 130
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI KALEF+P+ + + RG + A+
Sbjct: 131 PDYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIAS 190
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+ L ++G +++A + KA++ ++ EAW + +L
Sbjct: 191 YEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLG 250
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RG L LG+ ++AI
Sbjct: 251 RLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAI 290
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G++ A++ FD+ L+ P EA RG A E AI+ + +A++
Sbjct: 342 NRGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIASYDKALEII 401
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI KALE +P+S + + RG A+
Sbjct: 402 PDDA-AWNNRGIALGNLGRLEEAIASYDKALEIKPDSYESWYNRGSAMINLGRLEEAIAS 460
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ +A+ G +L ++G +++A ++ KA+++ + EA+ + Y +
Sbjct: 461 YDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFYNKACCYALQS 520
Query: 566 NSEKALECLQQVL 578
S++A+ LQQ +
Sbjct: 521 QSDQAIHNLQQAI 533
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 39/240 (16%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ D+ + RGI G+ A++ +D+ L+ P EA RG A
Sbjct: 289 AIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPD-DEAWYNRGIAL 347
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ F +A++ P EAW RG A LG EAI KALE P+ A
Sbjct: 348 GKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIASYDKALEIIPDDA-- 405
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
A+ G+AL ++G ++A ++ KA++
Sbjct: 406 ---------------------------------AWNNRGIALGNLGRLEEAIASYDKALE 432
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + E+W + +L E+A+ + L I A++ RG L LG+ ++AI
Sbjct: 433 IKPDSYESWYNRGSAMINLGRLEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAI 492
>gi|359460420|ref|ZP_09248983.1| hypothetical protein ACCM5_16963 [Acaryochloris sp. CCMEE 5410]
Length = 266
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G AQ +G Y AI+ ++Q L+ +P + E + RG A + + AI+DF +A+
Sbjct: 41 LEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNI 100
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAAV 503
P RG+ R+ +G+ A+ DL++A+E +PN A+ + R I+ + + + A+
Sbjct: 101 EPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILYSTRLGNLKLAL 160
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+DL +KL +AY G L+++G+ A + +AI +D EA+GH
Sbjct: 161 DDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGH 213
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G A+A Q + AI+ + +A+Q+NP E + RG A L +AI D ++AL
Sbjct: 40 LLEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALN 99
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS-IGEYKKA 536
EP +A +L+ RG D + A+ DL+ +++D A+ + S+ +G K A
Sbjct: 100 IEPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILYSTRLGNLKLA 159
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ AI+L N+ A+ + + + + A+ Q + ID + ++AY RGLLL
Sbjct: 160 LDDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGHRGLLLA 219
Query: 597 GLGQHKKAIKDLSSGS 612
G + +KDL +
Sbjct: 220 RKGDTQAGLKDLQKAA 235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A + Y AI+ F+Q L +P L RG R+ +L+ A+SD +AI+
Sbjct: 75 LARGLAYHDLQNYQQAIADFNQALNIEPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEV 134
Query: 445 NPSAGEAWKRRGQARAA-LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P+ EA+ R + LG A+ DL A++ +PN A+ + RG + D + A+
Sbjct: 135 DPNYAEAFNLRAILYSTRLGNLKLALDDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAI 194
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + + +D + AY + GL L+ G+ +A LK +Q + + G D
Sbjct: 195 TDYTQAINIDAKLAEAYGHRGLLLARKGD----TQAGLKDLQKAADLFQELG-------D 243
Query: 564 LANSEKALECLQQV 577
N +K L ++QV
Sbjct: 244 PENYQKTLMFIEQV 257
>gi|440755624|ref|ZP_20934826.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440175830|gb|ELP55199.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 971
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 117/223 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG N KY A+S +++ +K +P Y EA + RG + ++ + A+SD+++AI
Sbjct: 681 FNRGNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAIDI 740
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG + A+ D SKA++ PN A+ + RGI+ + + ++ A+
Sbjct: 741 NRNDAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALS 800
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + ++ AY GL ++ +Y+ A + +AI+++ NF A+ + Y DL
Sbjct: 801 DYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDL 860
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ AL + + I++ ++ AY RG+L + ++ A+ D
Sbjct: 861 QKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSD 903
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG ++ + A+SD+ +AI+ NP+ EA+ RG + L + A+ D SKA++
Sbjct: 683 RGNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAIDINR 742
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG++ + + ++ A+ D S + ++ + AY G+ + +Y A +
Sbjct: 743 NDAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDY 802
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ N+ EA+ + Y +L E AL Q + I+ F+ AY+ RG L L +
Sbjct: 803 SKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQK 862
Query: 601 HKKAIKDLS 609
+ A+ D S
Sbjct: 863 YDLALSDYS 871
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N+ KY A+S + + + +P EA RG QR+ + A+SD+++AI N
Sbjct: 750 NRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDYSKAIDIN 809
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG L + A+ D ++A+ PN A + RG + + ++ A+ D
Sbjct: 810 PNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSD 869
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH------LT- 558
S + +++ AY G+ + +Y A + KAI+++ N+ A+ + LT
Sbjct: 870 YSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTR 929
Query: 559 QFYQDLANSEKALECLQQ 576
+F + LA++EKA E +Q
Sbjct: 930 EFPKALADAEKASELYRQ 947
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK-RR 455
Y A+S+ +Q + P P + + + + ++ T+AI P A AW R
Sbjct: 626 YEQALSVINQAISLVPNNPNYYNEKYVVLSRLKRYDEGLAAITQAIDLAPRA--AWYFNR 683
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L + A+ D +KA++ PN A+ RG + + ++ A+ D S + +++
Sbjct: 684 GNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAIDINRN 743
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ AY GL + +Y A + KAI ++ N EA+ + Y + + AL
Sbjct: 744 DAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDYS 803
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + I+ +++AY+ RGLL + L +++ A+ D + R
Sbjct: 804 KAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIR 841
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+R ++ SK+ I+ ++ + RG+ N KY A++ ++Q ++ +P + A
Sbjct: 792 QRKYDLALSDYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYN 851
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG + ++ + A+SD+++AI N + A+ RG + A+ D +KA+E
Sbjct: 852 NRGNLYSDLQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEIN 911
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--NKSAY 520
PN A RG+V ++F A+ D +L ++ N++ Y
Sbjct: 912 PNYAYAYINRGVVYALTREFPKALADAEKASELYRQQGNEAGY 954
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITAR----IELAKL-CSLRNWSKAIRILDSLLAQ 65
Y L K + + ++ +R++ A A R +L K +L ++SKAI I + A
Sbjct: 824 YNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSDYSKAIDI-NRNYAY 882
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR Y + + + D +KA++++P AYI +G ++ +AL+
Sbjct: 883 AY-----VNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALAD 937
Query: 126 WEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
EK E Q + + + ++L++ +Q+ S
Sbjct: 938 AEKASE-LYRQQGNEAGYQQAQKLISMIRQEMS 969
>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 525
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV SRG+ GK +A++ +++ L+ DP Y A RG Q+ AI+DF
Sbjct: 202 SVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFN 261
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG--IVNFKFK 497
+A++ NPS+ A+ RRG+ A G +AI D SKAL+ + + RG N +
Sbjct: 262 KALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A+ D S ++++ N AY GL + G + +A +A++L F A+ +
Sbjct: 322 D--QAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPGFKLAYINR 379
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+D + +LE +VL ++ + AY RG +G++ +AI D +
Sbjct: 380 GDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYN 431
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG GKY AI+ F + ++ D P+A RG A ++ + A++DF + I
Sbjct: 71 LQRGNIYYTRGKYVEAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIAL 130
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ + G +A+ +A++D +K LE P L ERG V F + ++ A+
Sbjct: 131 NRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALR 190
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + Y GL + G+ + A + KA+++D +++ A+ + YQ
Sbjct: 191 DYNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQ 250
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + L ++ + AY RG + G + +AI D S
Sbjct: 251 KRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYS 295
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 108/222 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q ++ Y A+ + + L+ +P + +L RG + + A+ D+ AI+ +P
Sbjct: 142 GLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPR 201
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + + RG A G+ A+ D +KALE +P+ + RG + K + A+ D +
Sbjct: 202 SVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFN 261
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + +AY G + G Y +A + KA+ +D ++ A+ + Y +
Sbjct: 262 KALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ + I+ R + AY RGL+ G H +AI D S
Sbjct: 322 DQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFS 363
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + E A+SDF+ AI + S A+ +RG G+ VEAI D +++++ +
Sbjct: 39 RGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDA 98
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG+ K ++ A+ D + + L+++ AY GL +S Y++A +
Sbjct: 99 ANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDY 158
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K ++L+ + + + L ++AL + + +D R + Y+ RGL+ G+
Sbjct: 159 TKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGK 218
Query: 601 HKKAIKDLS 609
+ A+ D +
Sbjct: 219 PEAALADYN 227
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ F++ L+ +P A RG Q + AI+D+++A+ + A+ R
Sbjct: 252 RYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNR 311
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + G +AI D S A+E P +A RG+V + + A+ D S ++L
Sbjct: 312 GNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPG 371
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
K AY G G Y + E K + L+ +++ A+ Q Y + ++A+
Sbjct: 372 FKLAYINRGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYN 431
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L + + ++ + R LG+ +A+ D +
Sbjct: 432 KALALKPQVAEVHKNRADAYRKLGKATEAVADYDAA 467
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 184/479 (38%), Gaps = 72/479 (15%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++S+AI LDS A +Y R Y + I D +++QLD +A+
Sbjct: 52 AMSDFSRAIG-LDSSHAGAY-----LQRGNIYYTRGKYVEAIADFTRSIQLDAANPKAFY 105
Query: 108 LKGCAFSALGRKEEALS-----------VWEKGYEHALHQSADLKQFLELEELLTAAKQD 156
+G AF A ++AL+ WE Y+ L Q++ +E A +D
Sbjct: 106 SRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQAS--------KENYEQAVRD 157
Query: 157 RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSS-QSRDVSETCSKSS 215
+ T E + + SL + A ++ + ++N++ D S Q + +
Sbjct: 158 YTKTLELN-PRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAET 216
Query: 216 HDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS-SDGSKSTHASRDASEIN 274
P+ +D K P + G L ++ + + + +D +K A E+N
Sbjct: 217 GKPEAA--LADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNK-------ALELN 267
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
S+ +D + G D L DS ++ N +YS +
Sbjct: 268 PSSAAAYD------RRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
D +D + I+ +I+ +R +RG+ +
Sbjct: 322 DQAIADYS--------------------------LAIEINPRNAIA--YR-NRGLVYWTK 352
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ F Q L+ P + A I RG + + ++ DF + + N A++
Sbjct: 353 GMHDQAIADFSQALELRPGFKLAYINRGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQS 412
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQ A+GE AI D +KAL +P A++ R K AV D A +KL+
Sbjct: 413 RGQTYFAMGEYDRAIIDYNKALALKPQVAEVHKNRADAYRKLGKATEAVADYDAALKLN 471
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A S P + RG +G+ +A+ D S+A+ + + A +RG + + +
Sbjct: 25 ATVSEPQDANDFYERGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYV 84
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + ++LD N A+ GLA + Y +A K I L+R + EA+
Sbjct: 85 EAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLV 144
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N E+A+ + L ++ R + RG + L Q +A++D +
Sbjct: 145 QASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYN 193
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK++ +D R +RG A N G AI+ + ++ +P A RG +
Sbjct: 295 SKALDIDSRYIHAYNNRGNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGM 354
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DF++A++ P A+ RG G +++D +K L + RG
Sbjct: 355 HDQAIADFSQALELRPGFKLAYINRGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRG 414
Query: 491 IVNFKFKDFNAAVEDLSACVKLD-------KENKSAYTYLGLALSSIGEYKKA 536
F +++ A+ D + + L K AY LG A ++ +Y A
Sbjct: 415 QTYFAMGEYDRAIIDYNKALALKPQVAEVHKNRADAYRKLGKATEAVADYDAA 467
>gi|434404268|ref|YP_007147153.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,protein kinase family protein [Cylindrospermum
stagnale PCC 7417]
gi|428258523|gb|AFZ24473.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,protein kinase family protein [Cylindrospermum
stagnale PCC 7417]
Length = 704
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A++ +D+ ++ P Y EA GRG + A + AI+ F AIQ E W +
Sbjct: 380 KYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAK 439
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + AI+ KA+EF+P + +++G+ K ++ AV + V+L +
Sbjct: 440 GDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELKPD 499
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ LG AL ++ Y+ A A+ KA+Q ++ AW +L +A+E
Sbjct: 500 YNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFN 559
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
QV+ + +A++ RG LH + ++++AI+
Sbjct: 560 QVIKYNPSNYQAWYSRGWSLHQIQRYQEAIE 590
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N +Y +AI +++ ++ P Y EA +G A ++ + A+ F + ++
Sbjct: 438 AKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELK 497
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW G A L +A KA++++P+ RG + + + A+E
Sbjct: 498 PDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIES 557
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + N A+ G +L I Y++A E++ KA+ L RN W L L
Sbjct: 558 FNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQ 617
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + + ++++ RG L ++++AI
Sbjct: 618 KYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRRYQEAI 657
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G A VN +Y A +D+ ++ P Y A RG R AI F + I+ N
Sbjct: 506 SLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFNQVIKYN 565
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS +AW RG + + EAI+ +KAL + N + + G + + + A+
Sbjct: 566 PSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQKYEDAIAS 625
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ V+ ++ ++ G A ++ Y++A ++ +AI+ N+ +A
Sbjct: 626 YNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASYEQAIKYKPNYQQA 673
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N +Y A+ F+++++ P Y A G A + A + +A+Q P
Sbjct: 473 KGLALHNLKQYDEAVIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKP 532
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S AW RG L EAI+ ++ +++ P++ + RG + + + A+E
Sbjct: 533 SYNIAWFSRGNMLINLRRYPEAIESFNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESY 592
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L + + + LG + S+ +Y+ A ++ KA++ + E+W + +L
Sbjct: 593 NKALALKRNDYLVWYALGNSQYSLQKYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRR 652
Query: 567 SEKALECLQQVLYIDKRFSKAYHLR 591
++A+ +Q + + +A R
Sbjct: 653 YQEAIASYEQAIKYKPNYQQAIDAR 677
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
+K C + S + + + +A + G A A + +K P+ + + +
Sbjct: 248 DKMVCYDFRQRYPSAKLALQALQELAPLTSGTIALAPAALPNNIKTRPLNKKGIFLKFLL 307
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
F + S F +N +A E +K+ G L +A+ KA+ +PN
Sbjct: 308 AMFLVGVSGTASVFIVKEINNNNATELYKQ-GNTFLELQRYQDALAVYEKAVNLKPNYVQ 366
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +G F+ K + A+ +++ + A++ G +L+++ Y +A + +AI
Sbjct: 367 GWNGQGKALFELKKYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAI 426
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
QL ++ E W +++L + A++ ++ + + +A++ +GL LH L Q+ +A
Sbjct: 427 QLKNDYPEVWNAKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEA 486
Query: 605 I 605
+
Sbjct: 487 V 487
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E N+A L+++G + + + A+ V L + G AL + +Y +A
Sbjct: 325 EINNNNATELYKQGNTFLELQRYQDALAVYEKAVNLKPNYVQGWNGQGKALFELKKYPEA 384
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
A+ KAIQ+ ++LEAW +L +A+ + + + + + ++ +G
Sbjct: 385 LAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAKGDAFR 444
Query: 597 GLGQHKKAIK 606
L Q+ AIK
Sbjct: 445 NLNQYDNAIK 454
>gi|414075696|ref|YP_006995014.1| hypothetical protein ANA_C10400 [Anabaena sp. 90]
gi|413969112|gb|AFW93201.1| tetratricopeptide repeat-containing protein [Anabaena sp. 90]
Length = 280
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 6/218 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ R SK+ V +G Q +G Y +AI+ + + + +P Y A GRG
Sbjct: 53 IGRTSKAGEFYV-----QGQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTG 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI+D+ +A+ N EA+ R A ++G+ AI D ++A+ P A++ + R
Sbjct: 108 NKEGAIADYNQALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNR 167
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G D NAA+ED + ++++KE AY G A +S GE +KA + +A++++ N
Sbjct: 168 GNARANQGDKNAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPN 227
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
F A+ + Y + + AL+ LQ+ I DK +K
Sbjct: 228 FGAAFNNRGNAYAAIGDKRGALKDLQRAAAIFDKEGNK 265
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A V+ G Y AI+ ++Q + P Y E RG ARA Q + AA+ D+T+AI+ N
Sbjct: 132 NRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDKNAALEDYTQAIRIN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A A+ GE +AI D ++A+ PN + RG D A++D
Sbjct: 192 KEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPNFGAAFNNRGNAYAAIGDKRGALKD 251
Query: 506 LS-ACVKLDKE-NKSAY 520
L A DKE NK Y
Sbjct: 252 LQRAAAIFDKEGNKDLY 268
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGE + + GQ + G AI SK++ P A RG+V F + A+ D +
Sbjct: 59 AGEFYVQ-GQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTGNKEGAIADYN 117
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ ++ AY A SIG+Y++A + +AI + + E + + + +
Sbjct: 118 QALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDK 177
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
ALE Q + I+K ++ AY+ RG G+ +KAI D + R
Sbjct: 178 NAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVR 223
>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(modular protein) [Microcystis sp. T1-4]
gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(modular protein) [Microcystis sp. T1-4]
Length = 1080
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +G + G + AI+ +D+ L+ P + A + RG A E AI+ + A+
Sbjct: 152 FWFQQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFALDNLGRFEKAIASWDRAL 211
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P EAW RG A LG +AI +ALEF+P+ + RG + F A
Sbjct: 212 EIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQA 271
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ +++ + A+ G+AL ++G ++A ++ +A+++ ++ +AW +
Sbjct: 272 IASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALA 331
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
DL E+A+ Q L I F A++ RG+ L LG+ ++AI
Sbjct: 332 DLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAI 374
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 9/274 (3%)
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKF--CVTRISKSKSISVDFRLS---RGIAQ 391
K +D TE +F + + N+ N F + ++ I DF L+ RG A
Sbjct: 139 KETDLTEVVQDAAFWF----QQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFAL 194
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
N G++ AI+ +D+ L+ P EA RG A AI+ + A++ P A
Sbjct: 195 DNLGRFEKAIASWDRALEIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLA 254
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A LG +AI +ALE +P+ + + RG+ A+ ++
Sbjct: 255 WNNRGSALYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALE 314
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A+ Y G+AL+ +G +++A + +A+++ +F AW + +L E+A+
Sbjct: 315 IKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAI 374
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L I +A++ RG L LG+ ++AI
Sbjct: 375 ASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAI 408
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P A RG+A + E AI+ + A++
Sbjct: 223 NRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQAIASYDRALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG S +AI +ALE +P+ D + RGI F A+
Sbjct: 283 PDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+ L ++G ++A ++ +A+++ + +AW ++L
Sbjct: 343 FDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ L I + +A++ RG L LG+ +AI
Sbjct: 403 RFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAI 442
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + G++ AI+ FDQ L+ P + A RG LE AI+ + A++ P
Sbjct: 326 RGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKP 385
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG EAI ALE +P+ + + RG F A+
Sbjct: 386 DLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASY 445
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ A+ G AL ++G ++A ++ +A+++ +F EAWG+ L+
Sbjct: 446 DRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSK 505
Query: 567 SEKALECLQQVLY------IDKRFSKAYHLRGLLLH 596
+ + L+ ++Y ++ R + LR L H
Sbjct: 506 NRISTPSLEALIYRKPIVALNDREPHIFALREALPH 541
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ AI+ +D+ L+ P EA GRG A E AI+ + A++
Sbjct: 257 NRGSALYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A LG +AI +ALE +P+ + RGI A+
Sbjct: 317 PDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ A+++ ++ EAW + DL
Sbjct: 377 YDRALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLG 436
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L +A++ RG L LG+ ++AI
Sbjct: 437 RFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAI 476
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 18/259 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A N G+ AI+ +D+ L+ P Y +A RG A A E AI+ F +A++
Sbjct: 291 GRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIK 350
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG EAI +ALE +P+ + RG F A+
Sbjct: 351 PDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIAS 410
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL+ +G + +A ++ +A++ + EAW + +L
Sbjct: 411 YDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLG 470
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS--------------- 610
E+A+ + L I F +A+ RG + L +++ + L +
Sbjct: 471 RLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSKNRISTPSLEALIYRKPIVALNDREP 530
Query: 611 ---GSRTMMPHLIWNLTRW 626
R +PHLI W
Sbjct: 531 HIFALREALPHLIQGSPPW 549
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G++A AI+ +D+ L+ P EA RG A LE AI+ + A++
Sbjct: 427 NRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIK 486
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--NFKFKDFNAAV 503
P EAW RG A+ LSK P+ +++ + IV N + A
Sbjct: 487 PDFHEAWGNRGW----------AVCSLSKNRISTPSLEALIYRKPIVALNDREPHIFALR 536
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
E L ++ Y YLG A YK+
Sbjct: 537 EALPHLIQGSPPWGQIYRYLGQAYLKHSRYKE 568
>gi|425440272|ref|ZP_18820578.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
9717]
gi|389719348|emb|CCH96816.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
9717]
Length = 1539
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 6/256 (2%)
Query: 362 AKRNKKFCVTRISKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
+ + K + +K+ + D + +RG A + Y AI+ + + ++ P +A
Sbjct: 932 GQEDYKAAIVDYTKAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAF 991
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
GR A Q+ + AI+D+TEAI+ +P E + R Q R LG+ A+ DL++A+
Sbjct: 992 NGRAITYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALADLNEAVRL 1051
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P+ L ERG + + KD+ A+ D + ++L + AY GLA +Y +A +
Sbjct: 1052 DPDDVGNLRERGDIRRQLKDYQEAIADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIK 1111
Query: 539 AHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ +A+++ + F +G+ + ++ + ++A+ + + + F+ AY+ RGL
Sbjct: 1112 DYSEAVRIYPKPFY--YGNRGEAHRLQGDYQEAITDYTEAIGLKPDFADAYNARGLAKAE 1169
Query: 598 LGQHKKAIKDLSSGSR 613
+G + AI+DL ++
Sbjct: 1170 IGDKQGAIEDLQKAAQ 1185
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++S+ +VD L RGIA Y +AI+ +++ ++ P A RG A Q
Sbjct: 1215 QVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQENY 1274
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+T+AI+ NP A+ RG L E A+ D ++A+ +P+ AD +RG
Sbjct: 1275 QQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFKRGD 1334
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +D++ A+ D + ++L + +AY Y G++ S +Y+ A + +AI
Sbjct: 1335 ARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKDYQAAISDYSQAI 1387
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 382 DFRLSRGIA-QVNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +A +NE G+Y A+ ++ +K P + E+ RG R + + AI+D
Sbjct: 645 DFILYNWLAVPLNELGRYPEALKSGNKAIKIKPDHAESYFRRGQTRRYMGDYRGAIADVN 704
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV------- 492
EA++ P A++ RG ++ G++ AI D+++AL +P++A RGIV
Sbjct: 705 EALRLQPDLAIAYQFRGTLKSEQGDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQ 764
Query: 493 ---------------------------NFKFKDFNAAVEDLSACVKLDKENK-SAYTYLG 524
F KD+ AVED + ++L E+ YT G
Sbjct: 765 QRLAEDFNKALSLQPDDAWIHQNRGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTERG 824
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+YKKA E + +A++ N++ A+ + Y L N + E ++ L +
Sbjct: 825 FVRYQQEDYKKAIEDYTEALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDN 884
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ Y RG L +K I D R + P L WR F
Sbjct: 885 AWIYTERGDTYFFLKDKQKGIGDYDEAIR-LAPELADFYYNWRGNQF 930
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQ 443
+RG+A + KY AI + + ++ +YP+ RG A Q + + AI+D+TEAI
Sbjct: 1095 ARGLAYHLQEKYPEAIKDYSEAVR---IYPKPFYYGNRGEAHRLQGDYQEAITDYTEAIG 1151
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF------------------------- 478
P +A+ RG A+A +G+ AI+DL KA +
Sbjct: 1152 LKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQGNDDAYQVAQTKIREIQGIST 1211
Query: 479 --------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
P + D RGI ++K +D+ A+ + + ++L +N AY G A +
Sbjct: 1212 EDEQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQ 1271
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
Y++A + + +AI+L+ F A+ + Y +L + A+ + + I + Y
Sbjct: 1272 ENYQQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFK 1331
Query: 591 RG 592
RG
Sbjct: 1332 RG 1333
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 45/278 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTE 440
+RG A+ Y A+ + + ++ P Y E RG R Q + + AI D+TE
Sbjct: 787 NRGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTE----RGFVRYQQEDYKKAIEDYTE 842
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK--- 497
A++ P+ A+ RRG+A A LG +D KAL +P++A I ERG F K
Sbjct: 843 ALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDNAWIYTERGDTYFFLKDKQ 902
Query: 498 --------------------------------DFNAAVEDLSACVKLDKENKSAYTYLGL 525
D+ AA+ D + + L + Y G
Sbjct: 903 KGIGDYDEAIRLAPELADFYYNWRGNQFYGQEDYKAAIVDYTKAIGLKPDEAWYYYNRGD 962
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A +YK+A + +AI+L + +A+ Y N + A+ + + +D ++
Sbjct: 963 AYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYD 1022
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+ Y+ R + LG + A+ DL+ R + P + NL
Sbjct: 1023 ENYYSRSQVRQELGDLQGALADLNEAVR-LDPDDVGNL 1059
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+Q+ + +P +A +GRG A + + + AI+++ EAI+ P A+ RG A A
Sbjct: 1214 EQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQEN 1273
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+AI+D ++A+ P A RG + ++ +++ +AV D + +++ ++ Y G
Sbjct: 1274 YQQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFKRG 1333
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
A +Y A + +AI+L ++ A+ +Y+ ++ S++
Sbjct: 1334 DARDQSEDYSGAIADYTEAIRLKPDYTTAY-----YYRGISKSKQ 1373
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
R + A +AI+ PS EAW G A + + EA + KAL ++P D+
Sbjct: 555 RRYQQAQIALEKAIEIKPSY-EAWFVHGMALKSQKKYQEAKKSFQKALTYKPEYKVDKDL 613
Query: 486 -LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
L + G + D+ AV+ ++L ++ Y +L + L+ +G Y +A ++ KAI
Sbjct: 614 ALRQVGDSAWYSGDYEEAVKAFKEAIELKPDDFILYNWLAVPLNELGRYPEALKSGNKAI 673
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ + E++ Q + + + A+ + + L + + AY RG L G ++ A
Sbjct: 674 KIKPDHAESYFRRGQTRRYMGDYRGAIADVNEALRLQPDLAIAYQFRGTLKSEQGDNQGA 733
Query: 605 IKDLSSGSR 613
I D++ R
Sbjct: 734 IADINEALR 742
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + K DF RG A+ Y+ AI+ + + ++ P Y A RG +++ Q++
Sbjct: 1316 TEAIRIKPDDADFYFKRGDARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKD 1375
Query: 431 LEAAISDFTEAI 442
+AAISD+++AI
Sbjct: 1376 YQAAISDYSQAI 1387
>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 487
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 5/238 (2%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D R+ +RG A G+Y AI + + ++ +P Y A RG A + +
Sbjct: 84 SKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQ 143
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E +I DF+ AIQ +P + + RG A + E ++I+D +A++ +PN RG
Sbjct: 144 FEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRG 203
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A++DLS ++L+ E +AY G A G +A + KA+++
Sbjct: 204 NARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPIL 263
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + + N +AL + + + ++ SKAY RG + +G+ KA+ D
Sbjct: 264 ADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDF 321
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+++ ++ ++ D RG++ GK A+ + + ++ DP AL RG+A
Sbjct: 48 LLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRL 107
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E + AI D+ AI+ NP G A+ RG A G+ ++I+D S+A++ +P D+ +
Sbjct: 108 GEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNN 167
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + + ++ED ++LD AY G A G + A + +AI+L+
Sbjct: 168 RGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNP 227
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F A+ Y ++AL + + I + Y+ RG + G +A++D+
Sbjct: 228 EFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRGWVFFKKGNIAQALRDV 287
Query: 609 SSGSRTMMPHL 619
S ++ P L
Sbjct: 288 SKAV-SLNPEL 297
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++A A+ + + ++ + + RG + +L A+ D+++AI+ +P A R
Sbjct: 41 EHAKAVDLLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNR 100
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LGE AI+D +A+E P + RG F ++ED S +++D
Sbjct: 101 GSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPR 160
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+K Y G A + E K+ E +AIQLD N++ A+ + N E A++ L
Sbjct: 161 DKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLS 220
Query: 576 QVLYIDKRFSKAYHLR-------GLLLHGLGQHKKAIK 606
+ + ++ F+ AY R GLL L + KA++
Sbjct: 221 RAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVR 258
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D R +RG A + + +I FD+ ++ DP Y A RG AR
Sbjct: 152 SRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGN 211
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI D + AI+ NP A+ +RG A G EA+ D +KA+ P AD + RG
Sbjct: 212 VEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRG 271
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V FK + A+ D+S V L+ E AYT G SIGE KA +A++LD
Sbjct: 272 WVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELD 328
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G++ +I F + ++ DP + RG A E++ +I DF AIQ +
Sbjct: 133 NRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLD 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR G AIQDLS+A+E P A +RG + + A+ D
Sbjct: 193 PNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALND 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V++ Y G G +A KA+ L+ +A+ + ++ +
Sbjct: 253 YNKAVRISPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
KAL + L +D + Y R L + Q +A DL
Sbjct: 313 ECPKALPDFDRALELDPSAAAIYVFRAECLLSMHQTDRARSDL 355
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ ++AI++ + + RRG + LG+ EA+QD SKA+E +P L+ RG
Sbjct: 45 AVDLLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAY 104
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ +++ A++D ++L+ AY G A G+++K+ E +AIQ+D +
Sbjct: 105 YRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDV 164
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y + +K++E + + +D + AY RG G + AI+DLS
Sbjct: 165 YNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLS 220
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 3/250 (1%)
Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +S++ ++ +F L RG A V +G A++ +++ ++ P+ + R
Sbjct: 211 NVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNR 270
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + A+ D ++A+ NP +A+ RG ++GE +A+ D +ALE +P+
Sbjct: 271 GWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPS 330
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A I R + A DL LD N LG G+Y A E
Sbjct: 331 AAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFT 390
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K + L N A L + +A+E + + +D + +AY RG+ LG
Sbjct: 391 KLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDK 450
Query: 602 KKAIKDLSSG 611
K + D ++G
Sbjct: 451 KGSRNDFTTG 460
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A I + +I S +GE + L E +A+ LSKA+ ++D+ RG+
Sbjct: 10 AVIFLLSISIASAQESGEELFESAKMAQKLNEHAKAVDLLSKAIRNGVLNSDVFFRRGVS 69
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + N AV+D S +++D ++A G A +GEY +A + + +AI+L+ +
Sbjct: 70 HERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGL 129
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y EK++E + + ID R Y+ RG + + K+I+D
Sbjct: 130 AYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDF 185
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A++ G AI + ++ +P + A + RG A + L+ A++D+ +A++ +
Sbjct: 201 NRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRIS 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG G +A++D+SKA+ P + RG ++ + A+ D
Sbjct: 261 PILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQ 562
++LD + Y + L S+ + +A KA LD LE G L +
Sbjct: 321 FDRALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAG 380
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D + ALE +++ + S A+ G+ L G +A+++ +
Sbjct: 381 DYS---AALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFT 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK++S++ LS RG + G+ A+ FD+ L+ DP + R +
Sbjct: 288 SKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLSMHQ 347
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A SD +A +P+ E + G + G+ A++ +K ++ PN + + G
Sbjct: 348 TDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVDLG 407
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ K AVE+ + ++LD +N+ AY G+A +G+ K + +Q+
Sbjct: 408 MALGKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDKKGSRNDFTTGLQM 463
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y++A+ +F +++ P A + G A L A+ +FT AIQ +P EA+ R
Sbjct: 380 GDYSAALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLR 439
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
RG AR LG+ + D + L+ + ++ L +
Sbjct: 440 RGVARDLLGDKKGSRNDFTTGLQMKEETSPRLRQ 473
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L +++KA+RI +LA Y NR + + + +RD KA+ L+P L +AY
Sbjct: 249 ALNDYNKAVRI-SPILADPYN-----NRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYT 302
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
+G ++G +AL +++ E L SA E LL+ + DR+
Sbjct: 303 NRGWIHKSIGECPKALPDFDRALE--LDPSAAAIYVFRAECLLSMHQTDRA 351
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A S D+ DP PE L G+ + + AA+ FT+ + P+ A G A
Sbjct: 351 ARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVDLGMAL 410
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+++ ++A++ +P + + RG+ D + D + +++ +E
Sbjct: 411 GKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDKKGSRNDFTTGLQMKEE 466
>gi|33863210|ref|NP_894770.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33635127|emb|CAE21113.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 334
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI+ F++ ++ +P Y A RG A++ + + AI D+ AI N
Sbjct: 85 NRGLAKSKSGDNQGAIADFNKAIEINPQYVRAYNNRGLAKSKSGDNQGAIVDYNMAIAIN 144
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A+ L + EAI D +KA+ P A H+RG+ KD+ A+ D
Sbjct: 145 PVYLYGFLNRGLAKKNLNKYQEAIVDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIAD 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ ++ +AY G G+ + A KAI++D + +A+ + +L
Sbjct: 205 FNKAITLNPKDAAAYNNRGAVKGKSGDNQAAIADFNKAIEIDLQYADAYINRGLAKYNLG 264
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL----SSGSRTMMPHLIW 621
+++ A+ + + ID + AY+ RG + L ++ A D S GS++
Sbjct: 265 DNQGAITDYSEAIKIDPQDVFAYNNRGYVTWKLKDYQSACNDFKKAASLGSQST------ 318
Query: 622 NLTRWRNLCFNAW 634
+W N AW
Sbjct: 319 --AQWINRVDGAW 329
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A+ N KY AI +++ + +P A RG A+ ++ + AI+DF +AI
Sbjct: 152 LNRGLAKKNLNKYQEAIVDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITL 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + G++ AI D +KA+E + AD RG+ + D A+
Sbjct: 212 NPKDAAAYNNRGAVKGKSGDNQAAIADFNKAIEIDLQYADAYINRGLAKYNLGDNQGAIT 271
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D S +K+D ++ AY G + +Y+ A KA L W
Sbjct: 272 DYSEAIKIDPQDVFAYNNRGYVTWKLKDYQSACNDFKKAASLGSQSTAQW 321
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A+ + +AAI+D+ +AI NP +A+ RG A++ G++ AI D +KA+E P
Sbjct: 53 GNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIEINPQ 112
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ RG+ K D A+ D + + ++ + GLA ++ +Y++A +
Sbjct: 113 YVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAIVDYN 172
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI ++ A+ DL + + A+ + + ++ + + AY+ RG + G +
Sbjct: 173 KAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGAVKGKSGDN 232
Query: 602 KKAIKDLS 609
+ AI D +
Sbjct: 233 QAAIADFN 240
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+K+ G A+ G+ AI D +KA+ P AD + RG+ K D A+ D + ++
Sbjct: 49 YKKSGNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIE 108
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ + AY GLA S G+ + A + AI ++ +L + + ++L ++A+
Sbjct: 109 INPQYVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAI 168
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
+ + I+ + + AYH RGL L ++ AI D + + T+ P
Sbjct: 169 VDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNK-AITLNP 213
>gi|434390009|ref|YP_007125715.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428262587|gb|AFZ28535.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 227
Score = 94.7 bits (234), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI F ++++ +P Y E RG A++ ++ +AA+SDF +A++ N
Sbjct: 45 NQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLN 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG A A LG AI D ++ L +P S D + RG +N++ + A+ D
Sbjct: 105 PNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIAD 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY GLA ++G+ K A N LE L Q D
Sbjct: 165 FNQALQINPNLADAYGNRGLAEYALGDRKNA-----------INDLEQAASLFQRQGDTL 213
Query: 566 NSEKALECLQQV 577
++ LQQ+
Sbjct: 214 RYQQTQALLQQI 225
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 77/163 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI DF+ +Q NP E + RG A++ L + A+ D +AL P
Sbjct: 46 QGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLNP 105
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D + RG + + AA+ D + +++D ++ AY G G +K A
Sbjct: 106 NHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIADF 165
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+A+Q++ N +A+G+ L + + A+ L+Q + +R
Sbjct: 166 NQALQINPNLADAYGNRGLAEYALGDRKNAINDLEQAASLFQR 208
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
H +G+ + +FN A+ED S V+L+ + GLA S + ++K A +A++L
Sbjct: 44 HNQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRL 103
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ + +L + E A+ QVL ID + AY+ RG L + G HK AI
Sbjct: 104 NPNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIA 163
Query: 607 DLSSG 611
D +
Sbjct: 164 DFNQA 168
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ + +G + G AI+D S+ ++ P + RG+ + KDF AAV D
Sbjct: 41 QEYHNQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQA 100
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L+ + AY G A + +G + A + +++D ++A+ + N +
Sbjct: 101 LRLNPNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKL 160
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
A+ Q L I+ + AY RGL + LG K AI DL +
Sbjct: 161 AIADFNQALQINPNLADAYGNRGLAEYALGDRKNAINDLEQAA 203
>gi|300870997|ref|YP_003785868.1| hypothetical protein BP951000_1381 [Brachyspira pilosicoli 95/1000]
gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 790
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
S ++ I VD GIA+ N GKY +I +++ +K +P +A + RG ++ + + E+
Sbjct: 169 SNNEEIYVDI----GIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYES 224
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I+DF ++I+ P+ ++ RG ++A L E+I D +K +E N++D RG
Sbjct: 225 SINDFNKSIELTPNDENSYFNRGISKAYLRRYEESINDYNKVIELNSNNSDAYLNRGASK 284
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F + + A++D + ++L+ Y LG++ ++ +Y A E KAI+L+ N E+
Sbjct: 285 FNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNLKKYVDAIENFNKAIELNSNNEES 344
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ F + +E A++ ++ L I+K ++
Sbjct: 345 Y-FFRGFSKIYLENENAIDDIRSFLKINKNYN 375
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ N G+Y AI +++ ++ + E + G A++ + E +I + +AI+
Sbjct: 142 FNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIEYYNKAIKL 201
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG ++ LG+ +I D +K++E PN + RGI + + ++
Sbjct: 202 NPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAYLRRYEESIN 261
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ N AY G + ++ Y++A + K I+L+ N + + +L +L
Sbjct: 262 DYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNL 321
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
A+E + + ++ ++Y RG L +++ AI D+ S + + I+ +T
Sbjct: 322 KKYVDAIENFNKAIELNSNNEESYFFRGFSKIYL-ENENAIDDIRSFLKINKNYNIYIIT 380
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+++++ +P +A RG ++A+ + E ++ DF +I+ NP+ + +
Sbjct: 52 YEESIKYFNKVIELNPNNEKAYFNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLEKS 111
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ + +AI++L+KA+ N++ RGI + A++D + ++L+ N
Sbjct: 112 NVLLDINKYEDAIENLNKAITLNQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNSNN 171
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEK 569
+ Y +G+A S++G+Y+++ E + KAI+L+ N +A+ G+L ++ + + K
Sbjct: 172 EEIYVDIGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDFNK 231
Query: 570 ALECL--QQVLYIDKRFSKAYHLR 591
++E + Y ++ SKAY R
Sbjct: 232 SIELTPNDENSYFNRGISKAYLRR 255
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E +I F + I+ NP+ +A+ RG ++A L E+++D +++ PN + E
Sbjct: 50 KNYEESIKYFNKVIELNPNNEKAYFNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLE 109
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ V + A+E+L+ + L++ N AY G+A S++G Y+ A + + +AI+L+
Sbjct: 110 KSNVLLDINKYEDAIENLNKAITLNQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNS 169
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E + + +L E+++E + + ++ S AY RG+ LG+++ +I D
Sbjct: 170 NNEEIYVDIGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDF 229
Query: 609 SSGSRTMMPH 618
+ S + P+
Sbjct: 230 NK-SIELTPN 238
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ Y ++ FD +K +P + + + E AI + +AI
Sbjct: 74 FNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITL 133
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG A++ LG +AI D ++A+E N+ +I + GI + ++E
Sbjct: 134 NQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIE 193
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
+ +KL+ N AY G++ +G+Y+ + K+I+L N ++ + +++ Y
Sbjct: 194 YYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAY- 252
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L E+++ +V+ ++ S AY RG L +++AIKD +
Sbjct: 253 -LRRYEESINDYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFN 298
>gi|298492898|ref|YP_003723075.1| hypothetical protein Aazo_4774 ['Nostoc azollae' 0708]
gi|298234816|gb|ADI65952.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Query: 370 VTRISKSKSI---SVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
VT+I K+ + +++F L+ RG+A G SA++ ++ LK P + A R
Sbjct: 63 VTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYSNR 122
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + AISD+ +AIQ NP A+ RG +R AL + AI D ++ALE PN
Sbjct: 123 GNILHILGKYTEAISDYNQAIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPN 182
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG+V +D+ A+ D + ++ D E+ AY GL ++ +Y+ A + +
Sbjct: 183 FGEAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYN 242
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ +Q++ +G + N + A+ + ++L ++ + Y R + LG +
Sbjct: 243 QVLQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDY 302
Query: 602 KKAIKDLS 609
A+ D +
Sbjct: 303 NGALADYN 310
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M E LI +G + + E AI+ F EAIQ N + EA+ RG + L E +AI D
Sbjct: 1 MNGEQLIKQGVQKNLYGDYEGAITVFNEAIQLNCNLAEAYYHRGYSCLELAEFNQAIADY 60
Query: 473 SKALEFEPNSADI-----------LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+ + NSA + H RG+ F+ D +AV D++ +K E +AY+
Sbjct: 61 QQVTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYS 120
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ------ 575
G L +G+Y +A + +AIQL+ HL Y + NS AL+ Q
Sbjct: 121 NRGNILHILGKYTEAISDYNQAIQLNP-------HLAAAYHNRGNSRYALQDYQGAIADY 173
Query: 576 -QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q L I+ F +AY+ RGL++ L ++ AI D +
Sbjct: 174 NQALEINPNFGEAYYNRGLVMSHLQDYQGAIADFN 208
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 3/206 (1%)
Query: 416 EALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
+A RG A AFQ + ++A++D EA++ P A+ RG LG+ EAI D ++
Sbjct: 83 KAFHNRGLA-AFQCGDDQSAVTDINEALKFYPEFIAAYSNRGNILHILGKYTEAISDYNQ 141
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++ P+ A H RG + +D+ A+ D + ++++ AY GL +S + +Y+
Sbjct: 142 AIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPNFGEAYYNRGLVMSHLQDYQ 201
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A +AIQ D ++A+ Y+ L + E A++ QVL I+ Y LR
Sbjct: 202 GAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQVLQINPTLPTVYGLRANA 261
Query: 595 LHGLGQHKKAIKDLSSGSRTMMPHLI 620
H+ AI D++ + PHL+
Sbjct: 262 RRHQKNHQGAIADINK-LLQLNPHLV 286
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA N+ ++ + + DF L RG+ Y +AI ++Q+
Sbjct: 185 EAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQV 244
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L+ +P P R AR Q+ + AI+D + +Q NP E + R +R LG+
Sbjct: 245 LQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNG 304
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAY 520
A+ D ++AL+ PN A + RG + F+D AA++D L D+E Y
Sbjct: 305 ALADYNRALQINPNLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLY 358
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ Y AI+ ++Q L+ +P + EA RG + ++ + AI+DF +AIQ +
Sbjct: 155 NRGNSRYALQDYQGAIADYNQALEINPNFGEAYYNRGLVMSHLQDYQGAIADFNQAIQQD 214
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L + AIQD ++ L+ P + R K+ A+ D
Sbjct: 215 PEDIQAYLERGLIYRTLQDYENAIQDYNQVLQINPTLPTVYGLRANARRHQKNHQGAIAD 274
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++L+ Y ++ +G+Y A + +A+Q++ N A+ + YQ
Sbjct: 275 INKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQINPNLAAAYYARGEIYQHFR 334
Query: 566 NSEKALECLQQ 576
+ A++ Q+
Sbjct: 335 DIPAAIDDFQK 345
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ ++ + AI+ +++L+ +P E R +R F + A++D+ A+Q NP
Sbjct: 258 RANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQINP 317
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ A+ RG+ + AI D K+ + L+ + I+N
Sbjct: 318 NLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLYYQEIINL 365
>gi|427710065|ref|YP_007052442.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
gi|427362570|gb|AFY45292.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
Length = 575
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG AQ Y +AI+ +++ ++ DP Y +A RG R Q + +A++DF +AI+ +
Sbjct: 327 SRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYSNRGLTRIEQNDYPSALTDFDQAIRLD 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA+ R R + I + S+A+ P A + RG+ +D+ +A++D
Sbjct: 387 SNNAEAYNGRATIRRMQKDYAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQD 446
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ D + A+ YL GLA S+I ++K A + +AI++D N++EA+ + +
Sbjct: 447 YDKAI--DNSSGWAWAYLNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFN 504
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E A++ +++ D ++ AY +G L L + +A
Sbjct: 505 RKKYEDAIKDCDRIIQRDPNYAAAYENKGNALLALKKKPEA 545
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 118/216 (54%), Gaps = 4/216 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y +AI+ +++ ++ + + RG A++ + +AAI+D+ +AI+ +P+ G+A+
Sbjct: 301 KGRYPNAIAYYNKAIELNSRDAQTYTSRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYS 360
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG R + A+ D +A+ + N+A+ + R + KD+ A + + S ++++
Sbjct: 361 NRGLTRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRIN 420
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KAL 571
+ +AY GLA S++ +Y+ A + + KAI D + AW +L + A S+ A
Sbjct: 421 PKFAAAYNNRGLARSALQDYQSAIQDYDKAI--DNSSGWAWAYLNRGLARSAISQHKDAT 478
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + + ID+ + +AY+ R + +++ AIKD
Sbjct: 479 KDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKD 514
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK--R 454
YA+ I+ Q ++ +P + A RG AR+ ++ ++AI D+ +AI + S+G AW
Sbjct: 406 YAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQDYDKAIDN--SSGWAWAYLN 463
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR+A+ + +A +D +A+E + N + ++R + F K + A++D ++ D
Sbjct: 464 RGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQRDP 523
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+AY G AL ++ + +A+ A +A++L
Sbjct: 524 NYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A+ ++ A FD+ ++ D Y EA R AR +++ E AI D IQ
Sbjct: 462 LNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQR 521
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+P+ A++ +G A AL + EA +A++
Sbjct: 522 DPNYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLL 63
+R N + + D+ +R+DS A A R + ++ + S+AIRI +
Sbjct: 365 TRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRI-NPKF 423
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y NR S L+ ++ I+D DKA+ AY+ +G A SA+ + ++A
Sbjct: 424 AAAYN-----NRGLARSALQDYQSAIQDYDKAIDNSSGWAWAYLNRGLARSAISQHKDAT 478
Query: 124 SVWEKGYE 131
+++ E
Sbjct: 479 KDFDRAIE 486
>gi|186684314|ref|YP_001867510.1| hypothetical protein Npun_R4192 [Nostoc punctiforme PCC 73102]
gi|186466766|gb|ACC82567.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 269
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 15/244 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G N G Y AI + Q + ++ + + RG AR+ ++ + AI DF E I+ +
Sbjct: 12 SLGYILYNSGDYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLS 71
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ARAA+G++ AI+D ++A++ +P RG F ++ A+ED
Sbjct: 72 PQYAQAYAERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYSGNYQGALED 131
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------G 555
S +++ S Y LG+ S G +A + KA+ +D N + A+ G
Sbjct: 132 FSLIASMERSAVSYYN-LGILQYSQGINSQAIKHLTKALYVDPNLIAAYYVRGNACYELG 190
Query: 556 HLTQFYQDLANSEKALECLQQV-LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ D N K +E + + +Y + F A++ RGL H LG ++AI D+ ++
Sbjct: 191 DEQGAFADF-NEAKHIEAVGRGEIYSEDEF--AFYARGLASHRLGNREEAIADIQESAQI 247
Query: 615 MMPH 618
+ H
Sbjct: 248 ALKH 251
>gi|443329767|ref|YP_007378838.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428682393|gb|AFZ61157.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 227
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI F Q++K +P Y E RG A++ + +AA+ DF + +Q N
Sbjct: 45 NQGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLN 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S + + RG A A LG AI D ++ L+ +P S D + RG +N++ + A+ D
Sbjct: 105 SSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAISD 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +K++ AY GLA ++G+ K A
Sbjct: 165 FNQSLKINPNLADAYGNRGLAKYALGDRKSA 195
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G + +A+ F+Q+L+ + + + GRG A A L+AAI+DF + ++ +P
Sbjct: 80 RGLAKSQLGDFQAAVIDFNQVLQLNSSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDP 139
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG G AI D +++L+ PN AD RG+ + D +A+ DL
Sbjct: 140 QSVDAYYNRGFLNYRQGNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGDRKSAITDL 199
Query: 507 SACVKLDKENKSAYTY 522
L ++ Y
Sbjct: 200 QQAASLFQQQGDIQRY 215
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI DF++ ++ NP E + RG A++ LG+ A+ D ++ L+
Sbjct: 46 QGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLNS 105
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ D + RG+ + + + AA+ D + +K+D ++ AY
Sbjct: 106 SHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAY-------------------- 145
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+R FL Y+ N + A+ Q L I+ + AY RGL + LG
Sbjct: 146 -----YNRGFLN--------YRQ-GNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGD 191
Query: 601 HKKAIKDLSSGS 612
K AI DL +
Sbjct: 192 RKSAITDLQQAA 203
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + +FN A+ED S VKL+ + GLA S +G+++ A + +QL
Sbjct: 44 YNQGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQL 103
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + + + +L N + A+ QVL ID + AY+ RG L + G H+ AI
Sbjct: 104 NSSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAIS 163
Query: 607 DLSSGSRTMMPHL 619
D + S + P+L
Sbjct: 164 DFNQ-SLKINPNL 175
>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
Length = 4078
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 108/219 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A V ++ A+ F + L+ P AL RG A ++ A+ DF ++ P
Sbjct: 285 GLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPG 344
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EAW RRG A L EA++ ++ L N A L+ RGI + A+E
Sbjct: 345 NKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFD 404
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
A +++D SA G+A +S+G + +A ++ +A++++ +A H L +
Sbjct: 405 AALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRT 464
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E A++ ++ + D + +KA+H +GL L +G+ +AI+
Sbjct: 465 EDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIE 503
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 103/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA VN +Y A+ F++ L + +L RG A+A + AI F A+Q +P
Sbjct: 352 RGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDP 411
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A ++G A A+LG EA+ +AL P +D ++ +G K AV++
Sbjct: 412 SCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEF 471
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V D +N A+ GL L IG + +A EA +++ L F +A L
Sbjct: 472 ERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGAALIRLGK 531
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E AL+ Q + + ++ AY+ +GL L L + AI
Sbjct: 532 FEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAI 570
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + G +A A + FD+ + +P +AL G+G A +Q + AI+ A++
Sbjct: 3784 FEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEI 3843
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P ++G A AAL + +A+Q +ALE EP H +GI + + A+E
Sbjct: 3844 MPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAH-KGIALAELGMYRDAIE 3902
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ D A+ G +G+Y AE+A+ + + LD EAW
Sbjct: 3903 AFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQ 3962
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+ALE + L ID FS AY RG L + ++++A++
Sbjct: 3963 QKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVE 4004
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN +E++ K+S D S + R + L E + + F TR +
Sbjct: 2331 LNYHAAATEAFEKTSALDATSVPAAFGRGQ------SLAELDRDEEAIAAF--TRTLELD 2382
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S + RG A + Y AIS FD ++ P + ++ RG A Q + E AI
Sbjct: 2383 STQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRS 2442
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +A+ + S +A + G AAL ++ +A++ + LE P ADIL + F+
Sbjct: 2443 YKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLM 2502
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + A + ++ + + + G L +G ++++ EA+ +++ L+ + + W
Sbjct: 2503 RYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLK 2562
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ DLA E+A+ C +V+ D+ + A+ +G L LG+ AI+ L+
Sbjct: 2563 GRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALT 2614
Score = 89.7 bits (221), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 103/240 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ ++ L +G + ++ GK+A AI + L P RG A A
Sbjct: 2578 CFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAEL 2637
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A++ + AI N AW +G A LG +AIQ +P + ++
Sbjct: 2638 KQYEDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYD 2697
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + + AV + + A T GL+L + Y++A + A+ L+
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW H Y+ L N +A+ Q + +D R ++ +GL+L G Q A+ +
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817
Score = 89.4 bits (220), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIAQ G+ AI FD L+ DP A +G A A A++ + A++ NP
Sbjct: 386 RGIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINP 445
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A +G A + LG + +A+Q+ + + F+P +A H++G+ K F+ A+E
Sbjct: 446 GLSDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAF 505
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L A G AL +G+++ A +A +AI + ++ A+ L
Sbjct: 506 DESLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLER 565
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ +Q ID + + + RGL L L + +A+
Sbjct: 566 FSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAV 604
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 106/228 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A G++ A++ FD +L + AL +G + + E A S A+ N
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G A LG EAI +A+ +P S + +E+G+V + ++AAV +
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D K AY LGLAL ++ ++ +A +A K LD + +A + + L
Sbjct: 2818 RIAIECDGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQ 2877
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+A+ + + + + A++ +GL L +G + A RT
Sbjct: 2878 YREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRT 2925
Score = 83.2 bits (204), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 107/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ V G++ AI FD+ L P + +A +G A + E A+ F +AI +N
Sbjct: 488 KGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNS 547
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ ++G L +AI +A +P L+ RG+ K K F AV
Sbjct: 548 KYVNAYYQKGLTLVQLERFSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAF 607
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A + + EN +A G+AL + Y +A + +A++ + + W ++ + +
Sbjct: 608 DAVLAISPENTNARYEKGIALFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGH 667
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+AL + + ++ + ++AY +G++L L +H++A+ L+
Sbjct: 668 LEEALPAFNKAIALNPKLAEAYVRKGIVLFTLERHEEAVSTLN 710
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A +Y A+ +D+ L+ +P+ P +G A A AI F +AI+ +
Sbjct: 3854 KGLAYAALEQYRDAVQSYDRALEIEPL-PRVFAHKGIALAELGMYRDAIEAFDKAIEHDG 3912
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW +G + LG+ +A + + L +P +A+ +G+V + F A+E
Sbjct: 3913 NLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHY 3972
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D AY G AL ++ Y++A EA + + +F++A+ H + Q+L
Sbjct: 3973 DRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYIHKGRALQELEL 4032
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ AL ++ L ID + ++ G +L +G+H++A
Sbjct: 4033 YQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEA 4070
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 100/222 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G+Y A+ Q +P +A G A R+ + A+ FT ++ +P
Sbjct: 250 RGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHP 309
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A RG A L + EA+QD LE EP + + + RGI + A+E
Sbjct: 310 GNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESF 369
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L + + + + G+A + +G K+A E+ A+Q+D + A Y L
Sbjct: 370 NRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGR 429
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + L I+ S A + +G L LG+ + A+++
Sbjct: 430 FSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEF 471
Score = 79.7 bits (195), Expect = 6e-12, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A ++ AI +F+ +L+ DP +A +G A A + AI F + +Q P
Sbjct: 1134 KGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILP 1193
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G++ +G +AI L +A+E E + + + G K D+ A+E
Sbjct: 1194 DSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYALLKTGDYTGAIEAF 1253
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ D N + G+AL +++A E+ K++ D A+ H + Y DL
Sbjct: 1254 DRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGR 1313
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A + L + R++ A G+ + LG+ ++I D
Sbjct: 1314 HADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDF 1355
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 104/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + +Y AI +FD+ L+ DP +A+ +G A + A+ + + + +
Sbjct: 3242 KGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDA 3301
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +G A A LG +AI +KAL+ +P +A + +G+ A+E
Sbjct: 3302 GNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAF 3361
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + + + + GL+L ++G+Y A E++++AI +D + EAW
Sbjct: 3362 DRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGG 3421
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+E + L + AY+ +G L +G ++A+
Sbjct: 3422 YEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAV 3460
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 16/242 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A G Y A+ +D++L D E +G A A + AI F +A+ +P
Sbjct: 3276 KGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDP 3335
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A +G + A G +AI+ + +E EP S + RG+ F +N AVE
Sbjct: 3336 GNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESY 3395
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLTQ 559
+ +D N A+ + G A+ + G Y+ A EA KA++ +++ A+ H+
Sbjct: 3396 VRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGM 3455
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGSRTMMP 617
F + + + AL LQQ K YH +G L L Q+ +AI+ DL+ R
Sbjct: 3456 FREAVIAFDNAL-ALQQ-----KNVDALYH-KGTSLLRLEQYDEAIQAFDLALKIRPNHA 3508
Query: 618 HL 619
HL
Sbjct: 3509 HL 3510
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ G++ AI FD++++ +P E + RG + + A+ + AI +P
Sbjct: 3344 KGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDP 3403
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------------------------- 481
S EAW +G A A G +AI+ +KALEF P+
Sbjct: 3404 SNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAF 3463
Query: 482 ---------SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ D L+ +G + + ++ A++ +K+ + +T G+ALS++G
Sbjct: 3464 DNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRPNHAHLWTGKGIALSALGR 3523
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A KA+ +D A L Y L+ +A+ L+ L +A + +G
Sbjct: 3524 DQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKG 3583
Query: 593 LLLHGLGQHKKAI 605
L LG H AI
Sbjct: 3584 RALAMLGMHNDAI 3596
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA + G++ AI F++ L DP +A +G + A AI F I+ P
Sbjct: 3310 KGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREP 3369
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E W RG + ALG+ +A++ +A+ +P++A+ + +G F + A+E
Sbjct: 3370 GSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAF 3429
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + SAY G +L +G +++A A A+ L + ++A H L
Sbjct: 3430 NKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQ 3489
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A++ L I + + +G+ L LG+ + A+
Sbjct: 3490 YDEAIQAFDLALKIRPNHAHLWTGKGIALSALGRDQDAV 3528
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 101/212 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G I +++ L PM+ +L +G A E AI F A++ +P+ +A
Sbjct: 3216 GDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYD 3275
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+A +ALG EA++ K L + +A++ +++GI + A+ + + LD
Sbjct: 3276 KGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDP 3335
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N A + GL+L++ G + A EA + I+ + +E W H L A+E
Sbjct: 3336 GNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESY 3395
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + ID ++A++ +G + G ++ AI+
Sbjct: 3396 VRAIAIDPSNAEAWYFKGSAIFASGGYEDAIE 3427
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 98/219 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA V +Y AI+ F LK DP P G A ++ + AI +F+ A + +P
Sbjct: 862 KGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSRATELDP 921
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +A+ G A AA+G EA+ K+L P D + R + F+ VE
Sbjct: 922 SLLDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLERFSEVVETD 981
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L+ + G AL+S ++A A+ KA++++ F EAW DL
Sbjct: 982 DRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNK 1041
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ A+ + L I+ + +G L LG+ + AI
Sbjct: 1042 VQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAI 1080
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 103/217 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ ++ +D+ L +P +G + + E AI F I+++ + AW R
Sbjct: 2536 GRFEESLEAYDRSLALNPDSITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCAGAWLR 2595
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + +LG+ AI+ L+++L+ +P++A+ ++RGI + K + AV + +++
Sbjct: 2596 KGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAELKQYEDAVASYDRAIAINR 2655
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +A+ G+AL +G A +A +D F+ A+ L + A+
Sbjct: 2656 KYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYDKGLALARLGEHQDAVTAF 2715
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
VL I F A +GL L L ++++A L +
Sbjct: 2716 DGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAA 2752
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K++ +D R +R G++ + KY AI + L + P EA +G A A
Sbjct: 3532 TKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGM 3591
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI+ + +AI + EAW RG ++A+L + AI D AL P+ A RG
Sbjct: 3592 HNDAITAYDKAIAGKENFAEAWLYRGISQASLDQYDRAILDYDHALGLRPDYAPAHLFRG 3651
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I + AVE + + ++ E A Y GLAL Y +A +A+ + +
Sbjct: 3652 IALIHLSRHDQAVEAFNHALTVEPEYPEALFYKGLALLEQELYTEAIPVFDQALAANNRY 3711
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + E+A+ L I +++A RG L G ++AI
Sbjct: 3712 AEAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEALFERGRSLVHTGMFREAI 3766
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G+ A+S F + L D A G + + AI A+ P
Sbjct: 3514 KGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQP 3573
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA ++G+A A LG +AI KA+ + N A+ RGI ++ A+ D
Sbjct: 3574 ACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQASLDQYDRAILDY 3633
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L + A+ + G+AL + + +A EA A+ ++ + EA FY+ LA
Sbjct: 3634 DHALGLRPDYAPAHLFRGIALIHLSRHDQAVEAFNHALTVEPEYPEAL-----FYKGLAL 3688
Query: 567 SEK-----ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+ A+ Q L + R+++A+H +G+ L GQH++AI
Sbjct: 3689 LEQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAI 3732
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F L +GIA + ++ A + Q + P E RG + + A+ F +A
Sbjct: 2965 EFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKA 3024
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ N + + W + + A LG + EA+ K L P+ A+ RG + K F+
Sbjct: 3025 LALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDR 3084
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E + ++ +A+ G+AL +G Y++A A K ++ D +A + Y
Sbjct: 3085 AIESFDRVIGYLPQHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAY 3144
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +A+E + +L + A++ GL L L +HK AI R
Sbjct: 3145 AAIGKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIR 3196
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 99/225 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++ A+ FD +L P A +G A A+ +F EA++ NP
Sbjct: 590 RGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIALFHLLRYAEAVQEFHEALEQNP 649
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W G + A +G EA+ +KA+ P A+ +GIV F + AV L
Sbjct: 650 ALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAEAYVRKGIVLFTLERHEEAVSTL 709
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + ++ + Y GLALS++G + +A + KA++++R A+ L
Sbjct: 710 NRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFFERGNALLKLGK 769
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ Q L + K + +G+ L + +AI+ S
Sbjct: 770 PLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESA 814
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G Y AI FD+ ++ D EA +G+G + + A + + +P
Sbjct: 3887 KGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDP 3946
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW R+G +A + EA++ +AL +P + RG K + AVE
Sbjct: 3947 ENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAF 4006
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A + + + AY + G AL + Y+ A +A+++D E W + +
Sbjct: 4007 DAMLHIQPDFVDAYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGK 4066
Query: 567 SEKALECLQQ 576
E+A C ++
Sbjct: 4067 HEEARICYEK 4076
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 104/224 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G++ AIS +D L DP + + +G A A + AI + +AI+ P
Sbjct: 114 KGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVP 173
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +G + LG +A+ ++A E +P+ + + R + K A +
Sbjct: 174 GYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSA 233
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + G++L +G Y +A +A +A ++ + +AW +L +
Sbjct: 234 EKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQ 293
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A+E + L I + A RGL + L Q+++A++D S
Sbjct: 294 FDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDS 337
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y AI FD+ L D RG A R E A+ F +++ +P
Sbjct: 1237 GYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPG 1296
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ +G+ A LG +A K L+ +P D GI + F ++ D
Sbjct: 1297 NALAFYHKGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFD 1356
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-------------------- 547
+ + + A+ Y AL+ + +++A A+ A++LD
Sbjct: 1357 KTIAENANSSQAHYYKARALADLKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQF 1416
Query: 548 --------RNFLEAWGHLTQFYQD------LANSEKALECLQQVLYIDKRFSKAYHLRGL 593
R + + FYQ L A++ L Q + + R++ A + RGL
Sbjct: 1417 EKAIPEFERTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGL 1476
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHL 619
L+ LG+++++++ G+ + P L
Sbjct: 1477 ALNSLGRYRESLESF-DGALSADPQL 1501
Score = 73.2 bits (178), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 98/220 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + + G + A+ FD L +AL +GT+ + + AI F A++ P
Sbjct: 3446 KGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRP 3505
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G A +ALG +A+ +KAL + A ++ G+ K ++ A+ L
Sbjct: 3506 NHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYL 3565
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ A G AL+ +G + A A+ KAI NF EAW + L
Sbjct: 3566 EGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQASLDQ 3625
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+ L + ++ A+ RG+ L L +H +A++
Sbjct: 3626 YDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQAVE 3665
Score = 72.8 bits (177), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE----- 440
++G+A G++ AI+ F+ L Y EAL RG + AI+ F +
Sbjct: 3717 NKGVALARTGQHEEAIAAFNAALGIRSDYAEALFERGRSLVHTGMFREAIASFDQVLILA 3776
Query: 441 -----------------------------AIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
AI NPS +A +G+A G AI
Sbjct: 3777 PGNANAHFEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITA 3836
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
L +ALE P A + ++G+ + + AV+ ++++ + + + G+AL+ +G
Sbjct: 3837 LDRALEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPR-VFAHKGIALAELG 3895
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y+ A EA KAI+ D N EAW DL A + ++ L +D ++A+ +
Sbjct: 3896 MYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQ 3955
Query: 592 GLLLHGLGQHKKAIK 606
G++L + ++A++
Sbjct: 3956 GMVLSAQQKFEEALE 3970
Score = 72.4 bits (176), Expect = 8e-10, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G A + +Y AI FD + + EA +G A E AI F ++
Sbjct: 1098 IRQGKAFFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEI 1157
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P G+A +G A A LG+ +AI K L+ P+SA + +G + + A+
Sbjct: 1158 DPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIV 1217
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQ 562
L ++++ A+ YLG AL G+Y A EA + L R+ A GH + +
Sbjct: 1218 ALKRAIEIETSYTEAFYYLGYALLKTGDYTGAIEAFDR--NLTRDGSNAPGHFNRGIALE 1275
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E+ALE + L D + A++ +G + LG+H A
Sbjct: 1276 KSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADA 1317
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 101/225 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L GIA G++ A+ +FD+ L +P + +A+ R + +
Sbjct: 924 LDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLERFSEVVETDDR 983
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ NP+ + W ++G A A+ EAI SKALE A+ +G
Sbjct: 984 ILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKVQ 1043
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV S ++++ + G AL +G+ + A A+ K++++D + W +
Sbjct: 1044 DAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKA 1103
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ DL + A++ + +++R +A+ +GL L + +H+ AI
Sbjct: 1104 FFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAI 1148
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 39/269 (14%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I+++ +L+ +GI ++ A+S ++ L E+ +G A +
Sbjct: 676 NKAIALNPKLAEAYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGR 735
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+ F +A++ N A+ RG A LG+ +EA+ +ALE P+ IL+++G
Sbjct: 736 FDEAVRSFDKALEINRRCARAFFERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKG 795
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN- 549
+ + + F+ A+ + + L+ EN S YLG+A + Y A A AI LD
Sbjct: 796 MALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPTQ 855
Query: 550 -----------------------FLEAWGH-----LTQFYQDLA-----NSEKALECLQQ 576
FL A +T +Y LA + A+ +
Sbjct: 856 GQAFHFKGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSR 915
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D AY G+ L +G+H +A+
Sbjct: 916 ATELDPSLLDAYLYHGIALAAIGRHDEAV 944
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 97/217 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G+Y ++ FD L DP +A + + A A A+ AI P
Sbjct: 1474 RGLALNSLGRYRESLESFDGALSADPQLADAALQKAIALASLGRHADALGAADVAIAIRP 1533
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW R+G A A L EA+ +A+E +P +A ERG+V + A++
Sbjct: 1534 ELAQAWHRKGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRHIEAIQAF 1593
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L A+ GLAL ++G +++A + A+++ + L +
Sbjct: 1594 DQSLSLIPNYVPAFYNKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLES 1653
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
E A+ L ID + ++ + +GL L LG+H +
Sbjct: 1654 FEDAIGAFDAALAIDAQKTEYPYQKGLALAALGRHDE 1690
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 98/212 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A A+ F+ +L P A G A + + + AI F +AI+ P +A +
Sbjct: 3148 GKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEV 3207
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R ++ +LG+ E I ++AL +P LH +G+ + + + A++ +++D
Sbjct: 3208 RARSFDSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDP 3267
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A G ALS++G Y++A + + K + +D E L + A+
Sbjct: 3268 ACADAIYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAF 3327
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L +D ++A + +GL L G+H AI+
Sbjct: 3328 NKALDLDPGNAQAAYHKGLSLATTGRHPDAIE 3359
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 93/219 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + G++A A FD+ L+ P Y +A + G A + +I DF + I N
Sbjct: 1304 KGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENA 1363
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ +A + +A A L EA+ AL +P++ADI + +G + F A+ +
Sbjct: 1364 NSSQAHYYKARALADLKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQFEKAIPEF 1423
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
L N A+ GLAL + A + ++I L + A L
Sbjct: 1424 ERTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGR 1483
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++LE L D + + A + + L LG+H A+
Sbjct: 1484 YRESLESFDGALSADPQLADAALQKAIALASLGRHADAL 1522
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 35/287 (12%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + + K D RL GIA+ N GK+ +I FD+ + E+ +A + A A
Sbjct: 1319 FAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALAD 1378
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ E A+ + A++ +P + +G + L + +AI + + P +A +
Sbjct: 1379 LKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQFEKAIPEFERTEVLTPANAMAFY 1438
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK------------ 535
+ G+ + + N A++ L + L A GLAL+S+G Y++
Sbjct: 1439 QHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSAD 1498
Query: 536 ---AEEAHLKAIQLDR-------------------NFLEAWGHLTQFYQDLANSEKALEC 573
A+ A KAI L +AW +L +AL
Sbjct: 1499 PQLADAALQKAIALASLGRHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAA 1558
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ + ID ++++ RGL+L LG+H +AI+ S +++P+ +
Sbjct: 1559 FDRAIEIDPANARSHFERGLVLARLGRHIEAIQAFDQ-SLSLIPNYV 1604
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 100/210 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A + G + A+ F+ L+ P P L +G A E AI F A+ +
Sbjct: 1609 NKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGAFDAALAID 1668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E ++G A AALG EA S AL +P++ D L+ +G+ + F+ A+ED
Sbjct: 1669 AQKTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIED 1728
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ V+ + + +A+ G L ++ Y A ++ KA++L+ W + + +L
Sbjct: 1729 LAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLG 1788
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
N A+ +Q + I F +A++ G L
Sbjct: 1789 NDSDAVLAFEQAIKIVPDFGEAFYYMGQAL 1818
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 108/234 (46%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI +D + +G A ++ AI + + L+ + + EA I +G A ++
Sbjct: 983 RILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKV 1042
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A+ ++ A++ NP+ + W R+G A LG++ +AI K+L+ +P++ +G
Sbjct: 1043 QDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGK 1102
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F + A++ + L++ + A+ Y GLAL + ++ A +++D
Sbjct: 1103 AFFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNG 1162
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A H L + A+ + L I + A++ +G L +G++ AI
Sbjct: 1163 DAQFHKGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAI 1216
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 34/252 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQR- 429
G+ K A+ FD++L+ P Y EAL + A +
Sbjct: 2461 GLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLMRYEEALTAIDASLAIENN 2520
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
E ++ + ++ NP + W +G++ + L EAI
Sbjct: 2521 DVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDLARYEEAIPCFD 2580
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ +E + A +G F A+E L+ + L +N + + G+AL+ + +Y
Sbjct: 2581 RVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAELKQY 2640
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A ++ +AI ++R + AW L A++ + ID RF A++ +GL
Sbjct: 2641 EDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYDKGL 2700
Query: 594 LLHGLGQHKKAI 605
L LG+H+ A+
Sbjct: 2701 ALARLGEHQDAV 2712
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 2/234 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
+ + ++ + L+R + ++ K AI + ++ + P A + RG A RE E A
Sbjct: 1872 QPRDLNATYGLARSLDRLGSAK--EAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDA 1929
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++ FT ++ NP+ +AW +G+A L + +A++ L +P+ IL ++G+
Sbjct: 1930 VAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLV 1989
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K F A+ ++ + +T L +G ++ + +A+ LD + A
Sbjct: 1990 KLDRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRAL 2049
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ L E+A+ V+ D +A RG+ L LG+++ A+ +L
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIEL 2103
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 102/220 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + G++ AI +FD+ L P +A +G A + E AI+ + A+
Sbjct: 10 LRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIAAYDMAVSI 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS AW + A +G++ EA++ + L ++A+ +GI ++ F A+
Sbjct: 70 EPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYELGRFTDAIS 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +D + Y G+AL+ +G +++A ++ KAI++ + A+ + +L
Sbjct: 130 AYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYEL 189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
N + AL + +D ++ R +L Q++ A
Sbjct: 190 GNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFA 229
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 95/209 (45%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
++ L ++P + + RG + + A+ +A NP +AW G A +
Sbjct: 234 EKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQ 293
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+A++ ++ LE P +A L RG+ +++ K + AV+D + ++ + NK A+ G
Sbjct: 294 FDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRG 353
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+A ++ Y++A E+ + + L +N + L +++A+E L +D
Sbjct: 354 IACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDPSC 413
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ A +G+ LG+ +A+ R
Sbjct: 414 ASAAFQQGVAYASLGRFSEAVASYDRALR 442
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 6/236 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
+G A + A++ FD+ ++ DP + RG A R +EA I F +++
Sbjct: 1542 KGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRHIEA-IQAFDQSLSLI 1600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G A A+G EA+ + ALE P+ +L+++G+ + + F A+
Sbjct: 1601 PNYVPAFYNKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGA 1660
Query: 506 LSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
A + +D + K+ Y Y GLAL+++G + +AE A A+ D + +A H +L
Sbjct: 1661 FDAALAIDAQ-KTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAEL 1719
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGSRTMMPH 618
+A+E L + + + + + A+ ++G L + ++ A+ D + T PH
Sbjct: 1720 GRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPH 1775
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 102/226 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI+ G A+S F++ + DP R + Q + E A + +
Sbjct: 181 NKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQE 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + W RG + LG EA+ L +A P+ +D + G+ + + F+ AVE
Sbjct: 241 PDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEA 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ N A + GLA + +Y++A + ++ + EAW +L+
Sbjct: 301 FTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLS 360
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
E+ALE + L + + + + + RG+ LG++K+AI+ +
Sbjct: 361 RYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAA 406
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 103/224 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + G++ AI +++ ++ P Y A +G + L+ A+S F A + +
Sbjct: 147 NKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELD 206
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W R + ++ A Q K L EP+ ADI RG+ FK ++ A++
Sbjct: 207 PDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDA 266
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L ++ + A+ YLGLA ++ A EA + +++ A H + L
Sbjct: 267 LRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLK 326
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A++ L + +A++ RG+ L ++++A++ +
Sbjct: 327 QYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESFN 370
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 118/250 (47%), Gaps = 3/250 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYP 415
S+E + V+ ++ ++ D ++ +G++ + G A F+ + +P P
Sbjct: 2871 SSEHLEQYREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNP 2930
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
L+ G AR+ + E AI + A+ PS GE +G A A L EA L ++
Sbjct: 2931 AILLSLGKARSRLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQS 2990
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
E P+ + RG+ ++ AV + L++ + + + ++L+ +G ++
Sbjct: 2991 TERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISLAHLGRAEE 3050
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A K + L + EA+ + Y L + ++A+E +V+ + + A+H +G+ L
Sbjct: 3051 AVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWHEKGMAL 3110
Query: 596 HGLGQHKKAI 605
+ LG++++AI
Sbjct: 3111 YDLGRYEEAI 3120
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA + GK+ AI+ +D + +P P A + A + E A+ +
Sbjct: 46 KGIALYDLGKFEDAIAAYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRY 105
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G A LG +AI AL +P A + + +GI A+
Sbjct: 106 DNAEAWILKGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSY 165
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ AY G++L +G A A +A +LD + + W + +
Sbjct: 166 NKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQ 225
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+E A + ++ L + + + +RG+ L LG++ +A+ L +
Sbjct: 226 NEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQAT 271
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 34/259 (13%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + I+ + G+ A+ FD++L P EA +GRG A + + AI F
Sbjct: 3033 DIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRV 3092
Query: 442 IQSNPSAGEAWKRRGQA----------------------------------RAALGESVE 467
I P AW +G A AA+G+ E
Sbjct: 3093 IGYLPQHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAE 3152
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++ L P++A +E G+ + K A+ +++ + A+ +
Sbjct: 3153 AVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSF 3212
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+G+ K+ +A+ +A+ L + + L E+A++ + L ID + A
Sbjct: 3213 DSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADA 3272
Query: 588 YHLRGLLLHGLGQHKKAIK 606
+ +G L LG +++A+K
Sbjct: 3273 IYDKGRALSALGMYREAVK 3291
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ I D+ L D AL+ +G + A E A++ F I + A +
Sbjct: 2026 GRDEEVIRSADRALALDSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRG 2085
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + LG +A+ +L ALE + +AD+L +G ++ + VE L VK
Sbjct: 2086 RGVSLVQLGRYEDAVIELDHALENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRP 2145
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++++ + G A +G ++ A K +D +++ W + Q E AL
Sbjct: 2146 KDRTVLLFRGKAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAF 2205
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +++ + A++ +G L L +H +A+
Sbjct: 2206 ETAISLEETCAGAWYNKGRALGSLARHAEAV 2236
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + ++A A++ F++ L+ P +A +G A A Q A++ F A
Sbjct: 2221 NKGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLG 2280
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
GE W RG + L EA++ +K + P++A +G+ K AA E
Sbjct: 2281 LDQGELWYCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEA 2340
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LD + A G +L+ + ++A A + ++LD EA Y LA
Sbjct: 2341 FEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLA 2400
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+A+ + +++++ RGL L G+++KAI+
Sbjct: 2401 LYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIR 2441
Score = 62.8 bits (151), Expect = 7e-07, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 89/221 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L GI+ + G A+ F++ + +P EA + +G E A+S A+
Sbjct: 656 LYMGISLAHIGHLEEALPAFNKAIALNPKLAEAYVRKGIVLFTLERHEEAVSTLNRALDE 715
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N W +G A +ALG EA++ KALE A ERG K AV
Sbjct: 716 NAKDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFFERGNALLKLGKPLEAVV 775
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L ++ G+AL+ + +A A A+ L+ +L Y
Sbjct: 776 SYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGR 835
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ A+ + +D +A+H +G+ L ++ +AI
Sbjct: 836 ERYDDAIRAFDNAIALDPTQGQAFHFKGIALVQRERYTEAI 876
Score = 59.3 bits (142), Expect = 8e-06, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + + Y AI +FDQ L + Y EA +G A A + E AI+ F A+
Sbjct: 3684 KGLALLEQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNAALGIRS 3743
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-------F 499
EA RG++ G EAI + L P +A+ E+G + F
Sbjct: 3744 DYAEALFERGRSLVHTGMFREAIASFDQVLILAPGNANAHFEKGRALIALGNHAGATAAF 3803
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH-LKAIQLDRNFLEAWGHLT 558
+ A++ +C + A TY G +I +A E KAI D+ L A+ L
Sbjct: 3804 DRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEIMPKKAILHDQKGL-AYAALE 3862
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q+ + + ++ALE + + + +G+ L LG ++ AI+
Sbjct: 3863 QYRDAVQSYDRALEI--------EPLPRVFAHKGIALAELGMYRDAIE 3902
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S EA R+G LG EAI + L P A + +GI + F A+
Sbjct: 2 NKSDAEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIA 61
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V ++ + +A+ L+ +G+ ++A EA + + + + EAW +L
Sbjct: 62 AYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYEL 121
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ L ID R +K Y+ +G+ L LG+H++AI
Sbjct: 122 GRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAI 162
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 72/152 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G Q + GKYA A +++ L DP EA +G + Q++ E A+ + A+
Sbjct: 3919 MGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMI 3978
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A A+ EA++ L +P+ D +G + + + A+
Sbjct: 3979 DPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYIHKGRALQELELYQDALA 4038
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+++D K + +G L IG++++A
Sbjct: 4039 VFKRALEIDPTRKECWNDIGDILDRIGKHEEA 4070
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 92/228 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G + G++ A++ FD ++ D A GRG + E A+ + A+++
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIELDHALEN 2109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + + +G + L E ++ L KA++ P +L RG + + A
Sbjct: 2110 DATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLGRWENAYG 2169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+D + + Y G AL + Y+ A A AI L+ AW + + L
Sbjct: 2170 MFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYNKGRALGSL 2229
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
A +A+ + L + A + +GL L H A+ S +
Sbjct: 2230 ARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAA 2277
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 112/515 (21%), Positives = 191/515 (37%), Gaps = 59/515 (11%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAIR L I D + CY+ L + ++ D+ L+ P K
Sbjct: 2436 YEKAIRSYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKS 2495
Query: 111 CAFSALGRKEEALS--------------VWE-KGYEHALHQSADLKQFLELEELLTAAKQ 155
A L R EEAL+ VWE KG L++ ++ LE + A
Sbjct: 2496 RALFRLMRYEEALTAIDASLAIENNDVAVWEQKG--STLYELGRFEESLEAYDRSLALNP 2553
Query: 156 DRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSS-----QSRDVSET 210
D S+TC Y S+S L E + D++ ET E + + SS + E
Sbjct: 2554 D-SITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEA 2612
Query: 211 CSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS--SDGSKSTHAS 267
++S PD NG D + + + + + ++ + + G H
Sbjct: 2613 LTRSLDLQPDNANGWYDRGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALVHLG 2672
Query: 268 RDASEIN---RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTN 324
RD I ++ D N DK R G D +++ L S +
Sbjct: 2673 RDTDAIQAFENTTAIDPRFMNAFYDKGLALARLGEH-------QDAVTAFDGVLAISASF 2725
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+ ++ +S + E+ S L D L EA ++ +
Sbjct: 2726 VPALTQKGLSLFQLQRYEEAASSLGAALD-LNSGIFEAWYHQGLAYRHLGN--------- 2775
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S IA ++ AIS+ DP +G + Q + +AA+++F AI+
Sbjct: 2776 VSEAIASFDQ-----AISL-------DPRSFAVHYEKGLVLSGQEQWDAAVAEFRIAIEC 2823
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EA+ G A AL + EA +K +P AD + G+ + + + AV
Sbjct: 2824 DGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQYREAVS 2883
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+ + ++ A+ + GL+L IG + A +A
Sbjct: 2884 SFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADA 2918
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 74/167 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A V + AI + DQ + P Y A RG A ++ F A+ ++P
Sbjct: 1441 GLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSADPQ 1500
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A ++ A A+LG +A+ A+ P A H +G + A+
Sbjct: 1501 LADAALQKAIALASLGRHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAAFD 1560
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++D N ++ GL L+ +G + +A +A +++ L N++ A+
Sbjct: 1561 RAIEIDPANARSHFERGLVLARLGRHIEAIQAFDQSLSLIPNYVPAF 1607
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 95/227 (41%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + +G A GK AI + + LK DP I +G A + AI F A
Sbjct: 1061 DIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTRYQDAIDAFDNA 1120
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N + EA+ +G A + AI LE +P + D +G+ D
Sbjct: 1121 ISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRD 1180
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ ++ A+ G +L IG Y A A +AI+++ ++ EA+ +L
Sbjct: 1181 AIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYAL 1240
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+E + L D + + RG+ L + ++A++
Sbjct: 1241 LKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESF 1287
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 85/192 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + ++ A+ F++ + P A + +G AA F + +
Sbjct: 2290 RGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEAFEKTSALDA 2349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ A RGQ+ A L EAI ++ LE + A+ + RG + + A+
Sbjct: 2350 TSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLALYTEAISSF 2409
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ ++ GLAL + G+Y+KA ++ +A+ D + +A Y L
Sbjct: 2410 DYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRSYKQALTHDGSITDAVYQTGLCYAALNK 2469
Query: 567 SEKALECLQQVL 578
+++AL+ +VL
Sbjct: 2470 NDQALKTFDRVL 2481
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAW 452
G+Y A + F+Q+L P A G AR+ R + AI + + + P A+
Sbjct: 1856 GRYREAAAAFEQVLAMQPRDLNATYG--LARSLDRLGSAKEAIPAYAKVNRIAPDCERAF 1913
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A + E +A+ ++ +E P + D HE+G + + A+E +
Sbjct: 1914 LYRGFAHLQVREYEDAVAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQ 1973
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ GL+L + ++ A A AI N + L E+ +
Sbjct: 1974 KPDDPVILCQKGLSLVKLDRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIR 2033
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L +D ++A +G L LG+H++A+
Sbjct: 2034 SADRALALDSSETRALLAKGESLARLGRHEEAV 2066
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 98/232 (42%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+A G++ A + F L DP +AL +G + A AI D +
Sbjct: 1673 EYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIEDLAKT 1732
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP AW +G A+ +A+ KALE E + +G + +
Sbjct: 1733 VERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLGNDSD 1792
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV +K+ + A+ Y+G AL + +A A +A +L +F EA+ + +
Sbjct: 1793 AVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAFEEANRLMPDFTEAFQEKGRTF 1852
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L +A +QVL + R A + L LG K+AI + +R
Sbjct: 1853 FALGRYREAAAAFEQVLAMQPRDLNATYGLARSLDRLGSAKEAIPAYAKVNR 1904
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 92/222 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+ +A+A F++ D A GRG + A E AI+ FT ++
Sbjct: 2322 LNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLEL 2381
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + EA RG A L EAI +++ P+ A + RG+ + A+
Sbjct: 2382 DSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIR 2441
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ D A GL +++ + +A + + ++ + H ++ L
Sbjct: 2442 SYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRL 2501
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+AL + L I+ + +G L+ LG+ +++++
Sbjct: 2502 MRYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLE 2543
Score = 49.7 bits (117), Expect = 0.006, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 65/166 (39%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+ + + D +G A V KYA A+ FD L + P P L +G +
Sbjct: 1934 TRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLVKLDR 1993
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A++ FT AI + + LG E I+ +AL + + L +G
Sbjct: 1994 FEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRALLAKG 2053
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ AV + D EN A G++L +G Y+ A
Sbjct: 2054 ESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDA 2099
Score = 48.5 bits (114), Expect = 0.012, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 90/227 (39%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D G++ + +Y A+S FD+ + + A +G + E A F A
Sbjct: 2863 DAHYYEGLSSEHLEQYREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHA 2922
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P G+AR+ LG+ AI+ AL P+ + L E+GI +
Sbjct: 2923 RRTEPDNPAILLSLGKARSRLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEE 2982
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A L + + GL+L G Y A + KA+ L+ + W H
Sbjct: 2983 AEVVLGQSTERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISL 3042
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +E+A+ +VL + ++A+ RG + L +AI+
Sbjct: 3043 AHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESF 3089
Score = 44.3 bits (103), Expect = 0.26, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 88/238 (36%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ + + D +G + +Y + + +K P L+ RG A E A
Sbjct: 2108 ENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLGRWENA 2167
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
F + +P + W +GQA A +A+ A+ E A + +G
Sbjct: 2168 YGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYNKGRALG 2227
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AV + ++L + + A GLAL++ + A A A L + E W
Sbjct: 2228 SLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLGLDQGELW 2287
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
LA ++ALE + + + + A+ +GL L L H A + S
Sbjct: 2288 YCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEAFEKTS 2345
Score = 43.5 bits (101), Expect = 0.44, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 76 AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
Y Q + K+ I + +A +LDP+LL AY+ G A +A+GR +EA+ +++K
Sbjct: 897 GLAYLQDKQFKNAIPEFSRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDK 949
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+A C+ +L + VIR D+AL LD + +A + KG + + LGR EEA++ ++
Sbjct: 2018 QALCFLKLGRDEEVIRSADRALALDSSETRALLAKGESLARLGRHEEAVAAFD 2070
Score = 40.4 bits (93), Expect = 3.5, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 12 RLNKTHKTICEIDELVRV--DSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYE 68
RL + I D+ +RV D A + AR SL + + I + LA Q
Sbjct: 3180 RLKRHKDAIHAFDQAIRVRPDYFDAHEVRAR----SFDSLGDPKETIDAYNRALALQPMH 3235
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + + +LE ++ I+ D+AL++DP A KG A SALG EA+ ++K
Sbjct: 3236 VPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDK 3295
>gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 909
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 7/273 (2%)
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQV 392
++SS+S E+ +KL F+ +L + N+ ++ + ++ +++ D + RGI
Sbjct: 214 DESSNSPETTAKLYFEHGLLFFSGNQDEK----ALASFDQAIALNPDDYQAWNRRGIVLR 269
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+Y AI+ FDQ + +P Y +A GRG + E AI+ + +AI NP +AW
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIVLINLKRYEEAIASYDQAIALNPDDYQAW 329
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A L EAI +A+ P+ + RG+ + + A+ + L
Sbjct: 330 NNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIAL 389
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ +N A+ G L ++ Y++A ++ KA+ L+ + EAW + ++L E+A+
Sbjct: 390 NPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIA 449
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L ++ +A++ RG L L ++++AI
Sbjct: 450 SYDKALALNPDNYEAWNNRGGALGNLERYEEAI 482
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N +Y AI+ +DQ + +P +A RG A E AI+ + +AI N
Sbjct: 331 NRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALN 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L EAI KAL P++ + + RG + + A+
Sbjct: 391 PDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIAS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ +N A+ G AL ++ Y++A + +AI L+ ++ AW + +L
Sbjct: 451 YDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLE 510
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q L ++ S A++ RG+ L L ++++AI
Sbjct: 511 RYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAI 550
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RGI +N +Y AI+ +DQ + +P +A RG A E AI+ + +AI N
Sbjct: 297 GRGIVLINLKRYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALN 356
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A L EAI +A+ P++ + + RG + + A+
Sbjct: 357 PDDYQAWNNRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERYEEAIAS 416
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ +N A+ G L ++ Y++A ++ KA+ L+ + EAW + +L
Sbjct: 417 YDKALALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLE 476
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q + ++ +S A++ RG L L ++++AI
Sbjct: 477 RYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAI 516
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 4/246 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y AI +DQ L +P G E AI+ + +AI N
Sbjct: 535 NRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALN 594
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W G L EAI +A+ P+ +++ + RG+ K + A+
Sbjct: 595 PDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIAS 654
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ SA+ G+AL ++ +Y++A ++ +AI L+ +F +AW + ++L
Sbjct: 655 YDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLE 714
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
E+A+ Q + ++ S A+ +RG+ L L ++++AI + + + P + T
Sbjct: 715 RYEEAIASYDQAIALNPDDSSAWFMRGIALGNLERYEEAIASFNQ-AIALTPD---DSTA 770
Query: 626 WRNLCF 631
W NL F
Sbjct: 771 WNNLGF 776
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y AI+ +D+ L +P EA RG A E AI+ F +AI N
Sbjct: 433 NRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLN 492
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG L EAI +AL P+ + + RG+ + + A+
Sbjct: 493 PDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVS 552
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ S + G L ++ Y++A ++ +AI L+ + W + DL
Sbjct: 553 YDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLE 612
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q + ++ S ++ RG+ L L +++KAI
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAI 652
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N +Y AI+ FDQ + +P Y A RG E AI+ + +A+ N
Sbjct: 467 NRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALN 526
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG L EAI +AL P+ + + + G + A+
Sbjct: 527 PDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIAS 586
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ S + G+ L + Y++A ++ +AI L+ + W + +L
Sbjct: 587 YDQAIALNPDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLK 646
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ Q + ++ S A+ +RG+ L L ++++AI
Sbjct: 647 KYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAI 686
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQS 444
+RG+A N +Y AI+ +DQ + +P EA RG T R +R E AI+ + +A+
Sbjct: 365 NRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLER-YEEAIASYDKALAL 423
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EAW RG L EAI KAL P++ + + RG + + A+
Sbjct: 424 NPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLERYEEAIA 483
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L+ + SA+ G L ++ Y++A ++ +A+ L+ + AW + DL
Sbjct: 484 SFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDL 543
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q L ++ S ++ G L L ++++AI
Sbjct: 544 ERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAI 584
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQS 444
+RG N +Y AI+ +D+ L +P EA RG T R +R E AI+ + +A+
Sbjct: 399 NRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLER-YEEAIASYDKALAL 457
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EAW RG A L EAI +A++ P+ + + RG + + A+
Sbjct: 458 NPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIA 517
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L+ ++ SA+ G+ L + Y++A ++ +A+ L+ + W + +L
Sbjct: 518 SYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNL 577
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ Q + ++ S ++ G+ L L ++++AI
Sbjct: 578 DRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLERYEEAI 618
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 3/220 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +DQ + +P RG ++ E AI+ + +AI NP AW R
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMR 672
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + EAI +A+ P+ RG + + A+ + L+ +
Sbjct: 673 GIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASYDQAIALNPD 732
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ SA+ G+AL ++ Y++A + +AI L + AW +L Y +KA L
Sbjct: 733 DSSAWFMRGIALGNLERYEEAIASFNQAIALTPDDSTAWNNLGFLYLMQNQPQKAKSSLN 792
Query: 576 QVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDLSSGSRT 614
+ L I+ F Y L L L+H + + K K L S T
Sbjct: 793 RSLQINANF--FYPLFNLGLVHVIDNNIKEAKRLIQKSLT 830
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQ 70
RL + + I D+ + ++ A R + L +L+ + +AI D +A + Q
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIV--LINLKRYEEAIASYDQAIALNPDDYQ 327
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LE ++ I D+A+ L+P QA+ +G A L R EEA++ +++
Sbjct: 328 AWNNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQA 386
>gi|218248390|ref|YP_002373761.1| hypothetical protein PCC8801_3643 [Cyanothece sp. PCC 8801]
gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 406
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
K+ ++ + + G + G AI+ F+Q +K EA RG A++ + +
Sbjct: 144 PKTVQLTAEEWFNLGYNKGESGDNQGAIADFNQAIKIKSDLAEAYYNRGLAKSNLGDYQG 203
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AISD+ +AI+ P A+ RG + LG++ AI D ++A+E +P+ AD + RG+
Sbjct: 204 AISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYYNRGLAK 263
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D A+ D + +K+ + +AY G A ++G+ + A + +AI++ ++ A
Sbjct: 264 YNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGDKQGAIADYNQAIKIKPDYTLA 323
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +L +++ A+ Q + I ++ AY RG LG ++ AI D + ++
Sbjct: 324 YICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRGNAKKNLGDNQGAIADYNQAAQ 383
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ + K D +RG+A+ N G AI+ ++Q +K P Y A RG A+ +
Sbjct: 243 TQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGD 302
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ P A+ G A++ LG++ AI D ++A++ +P+ AD RG
Sbjct: 303 KQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRG 362
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
D A+ D + +L + + YL
Sbjct: 363 NAKKNLGDNQGAIADYNQAAQLYSQQNNMEWYL 395
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A + + ++ DP E+ RG QR L+ A++D+ +AI+ P +AW
Sbjct: 121 GDLNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSD 180
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG G++ +A++DLS+AL +PN RG K + AV D ++LD
Sbjct: 181 RGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLGQLDKAVADDGEAIRLDP 240
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALE 572
+ Y GL+L+++GEY KA + +A++L NF G +L AL
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG---AALS 297
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ L +D F++ Y+ R +L +G+ +KA+ D + R
Sbjct: 298 DYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALR 338
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G A+ + L+ DP P + RG A +L+ A++D EAI+ +P
Sbjct: 181 RGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLGQLDKAVADDGEAIRLDP 240
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------NSADILHERGIVNFKFKDFN 500
E + RG + AA+GE +AI D +AL P N D H +G +
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKG-------ELG 293
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
AA+ D + +KLD Y + +GE +KA + A++LD
Sbjct: 294 AALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALRLD 340
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A++ + ++ DP PE RG + A E + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 332
Query: 506 LSACVKLDKENKSA 519
++LD N +A
Sbjct: 333 YETALRLDPGNDNA 346
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G+Y AI+ +DQ L+ P P RG + + EL AA+SD+ A++ +
Sbjct: 248 NRGLSLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSYHLKGELGAALSDYESALKLD 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ + + R +GE +A+ D AL +P + + + R + + F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERRKALADYETALRLDPGNDNAANGRRAMIAEIAKFGA 362
>gi|145519597|ref|XP_001445665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413120|emb|CAK78268.1| unnamed protein product [Paramecium tetraurelia]
Length = 681
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ +G + + AI + L + + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHQQGFEARKKEDFIKAIEFYTMALMFNSNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D+T+A++ +P A+ RG + G+ AI+D +KA+E +P+ AD H +G K
Sbjct: 324 NDYTKAVEMDPKNAYAYYNRGISYDKKGDYNLAIKDFAKAIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +GE+ KA++ +L A + N
Sbjct: 384 KNQIKEAILEFNECLRLDKNHFKAYYNRANCYEKLGEFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
H+ E AL+ L ID ++ AY+ RGL+ +G+++KA D +
Sbjct: 444 HIGILMDRQQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKA 499
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K A+ F+ LK D Y A GRG E E A DF +AI P
Sbjct: 446 GILMDRQQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKAIDIEPQ 505
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
RG + ++ + +A++D KAL + + I G+V K +DF A S
Sbjct: 506 NPVYIHNRGCCKRSMNKFEQALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAAYCYS 565
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ EN G L+ +G++++A + +AI LD + A + + +
Sbjct: 566 QELIYSSENTRTLNNRGYCLAKLGQFEEAISDYSRAISLDPINIHAIYNRGICNERIGEF 625
Query: 568 EKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
KA+E QV+++ + + + AY RG +G+ AI D S
Sbjct: 626 HKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIGEMDLAIADYSKA 670
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--- 443
RG+ G+Y A F++ + +P P + RG + + E A+ DF +A+
Sbjct: 479 RGLVYDKIGEYEKACIDFNKAIDIEPQNPVYIHNRGCCKRSMNKFEQALEDFKKALSLDS 538
Query: 444 SNP-----------------SAGEAWKR--------------RGQARAALGESVEAIQDL 472
NP +A + + RG A LG+ EAI D
Sbjct: 539 KNPIIYSNMGLVLRKMEDFETAAYCYSQELIYSSENTRTLNNRGYCLAKLGQFEEAISDY 598
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAYTYLGLALSSIG 531
S+A+ +P + ++ RGI N + +F+ A+ED S + L + + +AY G +IG
Sbjct: 599 SRAISLDPINIHAIYNRGICNERIGEFHKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIG 658
Query: 532 EYKKAEEAHLKAIQLD 547
E A + KA+++D
Sbjct: 659 EMDLAIADYSKALEID 674
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P +I + ++ Q++L + I D + Q N + + ++G + ++AI+ +
Sbjct: 237 PSQIIDKEISQPVQQQLISMIPDHIK--QDNKKISDWFHQQGFEARKKEDFIKAIEFYTM 294
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL F N + RG K + +N A+ D + V++D +N AY G++ G+Y
Sbjct: 295 ALMFNSNHFKSIFNRGFAFDKLRMYNDAINDYTKAVEMDPKNAYAYYNRGISYDKKGDYN 354
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-ALECLQQVLYIDKRFSKAYHLRGL 593
A + KAI+LD + + + H F N K A+ + L +DK KAY+ R
Sbjct: 355 LAIKDFAKAIELDPSKADFY-HNKGFAMKKKNQIKEAILEFNECLRLDKNHFKAYYNRAN 413
Query: 594 LLHGLGQHKKAIKD 607
LG+ KA +D
Sbjct: 414 CYEKLGEFDKAQQD 427
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
++ KAI +L+ S + I NR F + +L ++ I D KA+++DP AY +
Sbjct: 284 DFIKAIEFYTMALMFNSNHFKSIFNRGFAFDKLRMYNDAINDYTKAVEMDPKNAYAYYNR 343
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G ++ G A+ + K E
Sbjct: 344 GISYDKKGDYNLAIKDFAKAIE 365
>gi|428306482|ref|YP_007143307.1| hypothetical protein Cri9333_2958 [Crinalium epipsammum PCC 9333]
gi|428248017|gb|AFZ13797.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 342
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ +F +G+ +YASAI+ + ++++ P Y EA RG A R AI+ +
Sbjct: 7 VEAEFFFQKGLHLNRIEEYASAIASYGKVVELKPDYAEAWYSRGNALYHLRRYAEAIASY 66
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+A++ P EAW RG A L EAI A++F+P+ + RGI
Sbjct: 67 DQALEYRPGFHEAWNNRGNALDDLKHYEEAIASYDNAIKFKPDYFWAWNNRGIALKNLGR 126
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ A++ ++ A+ G+A+ I KA + KA+ +F EAW H
Sbjct: 127 YSEAIDSYDRAIEFKPNYYWAWYNRGMAMRQIDRLDKAIASLDKALLAKPDFHEAWYHRG 186
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q+L E A+ + L + + A++ RGL L LG++++AI
Sbjct: 187 IALQNLGLCESAIASFDESLTVQPKNIDAWYFRGLALDSLGRYQQAI 233
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+Y+ AI +D+ ++ P Y A RG A L+ AI+ +A+ +
Sbjct: 116 NRGIALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRGMAMRQIDRLDKAIASLDKALLAK 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI ++L +P + D + RG+ + A+
Sbjct: 176 PDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKNIDAWYFRGLALDSLGRYQQAIAS 235
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + +K A GL L +G Y++A + KA+ + + A + + Y +
Sbjct: 236 FDKTLEI-QHDKYALNAKGLVLLKLGRYQEALISFDKALHIKPDDHTALYNKARCYALQS 294
Query: 566 NSEKALECLQQVLYI 580
+++ A++ LQQ +++
Sbjct: 295 DADLAIKHLQQAIHL 309
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 38/197 (19%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERG------------IVNF----------------- 494
E AI K +E +P+ A+ + RG I ++
Sbjct: 24 EYASAIASYGKVVELKPDYAEAWYSRGNALYHLRRYAEAIASYDQALEYRPGFHEAWNNR 83
Query: 495 -----KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A+ +K + A+ G+AL ++G Y +A +++ +AI+ N
Sbjct: 84 GNALDDLKHYEEAIASYDNAIKFKPDYFWAWNNRGIALKNLGRYSEAIDSYDRAIEFKPN 143
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AW + + + +KA+ L + L F +A++ RG+ L LG + AI
Sbjct: 144 YYWAWYNRGMAMRQIDRLDKAIASLDKALLAKPDFHEAWYHRGIALQNLGLCESAIASFD 203
Query: 610 SGSRTMMPHLIWNLTRW 626
S T+ P N+ W
Sbjct: 204 E-SLTVQPK---NIDAW 216
>gi|357415668|ref|YP_004927403.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
flavogriseus ATCC 33331]
gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
flavogriseus ATCC 33331]
Length = 1261
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ L+ DP Y AL RG A + A++D+T A++ +
Sbjct: 819 ARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELD 878
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG A G EA+ DL+ ALE +P +A + RG + + ++ AV D
Sbjct: 879 PTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 938
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD A G G Y++A + A++LD A G Q +Q
Sbjct: 939 LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAG 998
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++A+ L L +D + A RG G++++A+ D ++
Sbjct: 999 RYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTA 1043
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 8/340 (2%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
+ +++ GR D+ L D +++ ++ D +D T E
Sbjct: 616 RGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELDP 675
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISI 403
L++ ET +A R + VT + + + + + RG A G++ A++
Sbjct: 676 TLTWALGARGETHRQAGRYDE-AVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
L+ DP Y AL RG + A++D T A++ +P+ A RG G
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EA+ D + ALE +P A L RG + + ++ AV DL+A ++LD +A
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A Y +A + A++LD + A G ++ ++A+ L L +D
Sbjct: 855 GDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPT 914
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+ A RG G++ +A+ DL++ + + P L W L
Sbjct: 915 NAWAIGSRGQAHQQAGRYDEAVTDLTA-ALELDPTLTWAL 953
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 1/238 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ + L+ DP Y AL RG + A++D T ++ +
Sbjct: 785 ARGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELD 844
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG A EA+ D + ALE +P A L RG + + ++ AV D
Sbjct: 845 PTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTD 904
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD N A G A G Y +A A++LD A G + +Q
Sbjct: 905 LTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 964
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
E+A+ L +D + A RG G++ +A+ DL++ + + P L W L
Sbjct: 965 RYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTA-ALELDPTLTWAL 1021
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 136/625 (21%), Positives = 239/625 (38%), Gaps = 53/625 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEI 69
YR ++ + + E D + ++ A A R E +L L N +A+ L + L +
Sbjct: 553 YRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRL--LGNEDQAVADLTAALELEPTNA 610
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+ +R + Q ++ + D AL+LDPTL A +G GR +EA++
Sbjct: 611 WALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVT----- 665
Query: 130 YEHALHQSADLKQFLELEELLTAAKQDRSVT----CEYD--VSNSMSSLTVSES---GLN 180
D LEL+ LT A R T YD V++ ++L + + L
Sbjct: 666 ---------DYTAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALG 716
Query: 181 ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKS 239
A + + + H ++ +++ D + + + D GR DEA + +
Sbjct: 717 ARGQAHQQAGRHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAAL--- 773
Query: 240 GLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSD-------DFDICNGPIDKAS 292
E+ + + TH R A + +D D +
Sbjct: 774 ---------ELDPTYAAALGARGDTH--RQAGRYDEAVTDYTAALELDPTYATALGARGE 822
Query: 293 VNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKW 352
+ + GR D+ L D + +++ ++S D +D T +
Sbjct: 823 THRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYA 882
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQI 407
L + ++ ++ + ++ +D SRG A G+Y A++
Sbjct: 883 TALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAA 942
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L+ DP AL RG E A++D+T A++ +P+ A RGQA G E
Sbjct: 943 LELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDE 1002
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ DL+ ALE +P L RG + + + AV D +A ++LD + A G
Sbjct: 1003 AVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETH 1062
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
G Y++A + A++LD A G Q +Q E+A+ L L +D A
Sbjct: 1063 RQAGRYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWA 1122
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGS 612
R G ++A D+ +
Sbjct: 1123 LASRSQAHRQAGHREEARMDVEQAT 1147
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPM 413
ET +A R + VT ++ + + + SRG A +Y A++ + L+ DP
Sbjct: 822 ETHRQAGRYDE-AVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPT 880
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y AL RG A + A++D T A++ +P+ A RGQA G EA+ DL+
Sbjct: 881 YATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLT 940
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
ALE +P L RG + + + AV D +A ++LD N A G A G Y
Sbjct: 941 AALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRY 1000
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A A++LD A G + +Q E+A+ L +D A RG
Sbjct: 1001 DEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGE 1060
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
G++++AI D ++ + + P W L
Sbjct: 1061 THRQAGRYEQAITDYTA-ALELDPTDAWAL 1089
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G+Y A++ L+ DP A+ RG A + A++D T A++ +
Sbjct: 887 SRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELD 946
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG+ G +A+ D + ALE +P +A + RG + + ++ AV D
Sbjct: 947 PTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 1006
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD A G G Y++A + A++LD A + ++
Sbjct: 1007 LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAG 1066
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
E+A+ L +D + A RG G++++A+ DL++ + + P L W L
Sbjct: 1067 RYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTA-ALELDPTLDWAL 1123
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + A++ FD+ + + A RG + A++D T A++ P
Sbjct: 548 RGILLYRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRLLGNEDQAVADLTAALELEP 607
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG+ G + EA+ DL+ ALE +P L RG + + ++ AV D
Sbjct: 608 TNAWALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDY 667
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A ++LD A G G Y +A + A++LD + A G Q +Q
Sbjct: 668 TAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGR 727
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E+A+ L L +D ++ A RG G++ +A+ DL++
Sbjct: 728 HEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTA 771
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
+ +++ GR D L D + + +++ ++ D +D T E
Sbjct: 956 RGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDP 1015
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSK-SISVDFRLS-RGIAQVNEGKYASAISIF 404
L++ ET +A R ++ + + + D+ L+ RG G+Y AI+ +
Sbjct: 1016 TLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDY 1075
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
L+ DP AL RG A E A++D T A++ +P+ A R QA G
Sbjct: 1076 TAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWALASRSQAHRQAGH 1135
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED----LSACVKLDKENKSAY 520
EA D+ +A E P+ + E+ ++ F A E L++ V E K++Y
Sbjct: 1136 REEARMDVEQATEAHPDDLECAFEKLMLETVEGRFEAFREQWRQLLTSPVNPQDETKASY 1195
Query: 521 TYL 523
L
Sbjct: 1196 LRL 1198
>gi|148284046|ref|YP_001248136.1| hypothetical protein OTBS_0112 [Orientia tsutsugamushi str.
Boryong]
gi|148284371|ref|YP_001248461.1| hypothetical protein OTBS_0632 [Orientia tsutsugamushi str.
Boryong]
gi|148284603|ref|YP_001248693.1| hypothetical protein OTBS_1081 [Orientia tsutsugamushi str.
Boryong]
gi|148284641|ref|YP_001248731.1| hypothetical protein OTBS_1161 [Orientia tsutsugamushi str.
Boryong]
gi|148284656|ref|YP_001248746.1| hypothetical protein OTBS_1187 [Orientia tsutsugamushi str.
Boryong]
gi|148285116|ref|YP_001249206.1| hypothetical protein OTBS_2064 [Orientia tsutsugamushi str.
Boryong]
gi|146739485|emb|CAM79178.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146739810|emb|CAM79698.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740042|emb|CAM80147.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740080|emb|CAM80227.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740095|emb|CAM80253.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740555|emb|CAM81159.1| tetratricopeptide repeat proteinFT with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 220
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K +S + + ++GIA +N G +AI +D +K P Y EA I +G AF +L+ A
Sbjct: 9 KYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLAFLGQLQNA 68
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F AI+ +PS +++ +G + L EAI+ + A++++PN ADI + +G++
Sbjct: 69 IEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIYYNKGMILE 128
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K A+E+ + + + A YL G++L S+G+Y KA+E AI+ + N +
Sbjct: 129 KLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIA 188
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ + + +L N E +Q L I K++S
Sbjct: 189 EYEAMFKKLTELENFTGVKE-YEQKLQILKKYS 220
Score = 49.3 bits (116), Expect = 0.008, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 68/140 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+++ A+++ ++ + + +GI A+E+ +K + AY GL L+
Sbjct: 1 MENFDIAIKYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLA 60
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+ + A E AI+ D + ++++ + L +A+E + D + Y
Sbjct: 61 FLGQLQNAIEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIY 120
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
+ +G++L LG+H+KAI++
Sbjct: 121 YNKGMILEKLGKHQKAIENF 140
>gi|384210358|ref|YP_005596078.1| hypothetical protein Bint_2904 [Brachyspira intermedia PWS/A]
gi|343388008|gb|AEM23498.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 596
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 18/235 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N +Y AI FD+ ++ +P + RG + + + AI DF ++I+ +
Sbjct: 333 NRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSIELD 392
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG +A L EAI+D +K++E +PN ++ + RG A++D
Sbjct: 393 PNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKD 452
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLT 558
+ ++L+ N SAY G A + +G YKKA + KAI+L+ N A +L
Sbjct: 453 FNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLK 512
Query: 559 QFYQDLANSEKALEC--LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++ + + + KA+E Q + Y +K SK+Y LG + +A D G
Sbjct: 513 KYKEAIKDFNKAIELNYNQFIAYYNKGISKSY---------LGLNDEAYNDFIKG 558
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y A F++ +K +P A RG A+ + ++ + AI DF +AI+ N
Sbjct: 469 NRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLKKYKEAIKDFNKAIELN 528
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ A+ +G +++ LG + EA D K +++ +E+ I+
Sbjct: 529 YNQFIAYYNKGISKSYLGLNDEAYNDFIKGYNLADDTSKKEYEQRII 575
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
+++Y L + + I + D+ + ++ + R SL + +AI+ D +
Sbjct: 336 NAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTK--YSLEQYKEAIKDFDKSIELDP 393
Query: 68 EIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
QD N R + L +K I D +K+++LDP +AY +G LG E+A+ +
Sbjct: 394 NNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKDF 453
Query: 127 EKGYE 131
K E
Sbjct: 454 NKAIE 458
>gi|445063179|ref|ZP_21375426.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
gi|444505434|gb|ELV05949.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
Length = 290
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F+ +++ DP Y A G + E AI+ +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAIEDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A G A LG EAI+ KA+E PN A + G++ +
Sbjct: 97 KALLLDNNCVQACNNIGLANHNLGLYDEAIKYYIKAIEISPN-AHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ Y +A E K IQLD + A+ ++
Sbjct: 156 EEAIEYFNKVIQLDNHYIKAYYNMGLSKYNLKNYDEALEYFNKVIQLDSKNIYAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
QDL +ALE + L +DK +SKAY+ RG+
Sbjct: 216 IKQDLKLHSEALEYFNKALLLDKNYSKAYYNRGV 249
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y AI F+++++ D Y +A G ++ + + A+ F + IQ +
Sbjct: 146 GLIKNDLGMYEEAIEYFNKVIQLDNHYIKAYYNMGLSKYNLKNYDEALEYFNKVIQLDSK 205
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G + L EA++ +KAL + N + + RG+ K + + A+ D +
Sbjct: 206 NIYAYNNIGIIKQDLKLHSEALEYFNKALLLDKNYSKAYYNRGVSELKLELYECALYDFN 265
Query: 508 ACVKLDKENKSAY 520
C++L+ AY
Sbjct: 266 ICLELEPNYFPAY 278
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
++++ +K + + +S +I + RG+ + A+ED +++D + +AY +GL
Sbjct: 22 KSLEYFNKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIEDFENVIRIDPKYINAYNNIGLV 81
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY------------ 561
++G Y++A + KA+ LD N ++A ++ ++Y
Sbjct: 82 KHNLGLYEEAINYYKKALLLDNNCVQACNNIGLANHNLGLYDEAIKYYIKAIEISPNAHT 141
Query: 562 --------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
DL E+A+E +V+ +D + KAY+ GL + L + +A++
Sbjct: 142 YNNIGLIKNDLGMYEEAIEYFNKVIQLDNHYIKAYYNMGLSKYNLKNYDEALE 194
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D L E F D+ ++E + + ++ Y GLA SS+G Y++A E
Sbjct: 2 NCIDNLLELASKAFDSADYKKSLEYFNKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIEDF 61
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
I++D ++ A+ ++ +L E+A+ ++ L +D +A + GL H LG
Sbjct: 62 ENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYKKALLLDNNCVQACNNIGLANHNLGL 121
Query: 601 HKKAIK 606
+ +AIK
Sbjct: 122 YDEAIK 127
>gi|428210888|ref|YP_007084032.1| hypothetical protein Oscil6304_0361 [Oscillatoria acuminata PCC
6304]
gi|427999269|gb|AFY80112.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 362
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF L+ G+ ++ Y AI+ F + ++ DP +A RG AR + A+ DFTE
Sbjct: 41 DF-LTEGVQKLEAEDYEGAIADFTRAIELDPTLVDAYTARGIARHRSEDYVGAVEDFTEV 99
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P + + R L E AI DL++ +E P+ AD R + +F
Sbjct: 100 LEIQPENSQVYGLRALDYLYLREYQAAIADLNRVIEENPDDADAYMLRAEAQTELGEFQP 159
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++L +N + Y G + + G+Y + E + I LD N A+ Y
Sbjct: 160 AIRDYNRAIELSPDNPTFYRRRGQSRARSGDYPGSIEDFNRVIDLDANDALAYVFRGNAY 219
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D+ SE AL ++ L +D ++AY+ RG+ L ++ AI D +
Sbjct: 220 DDIGESEAALADYEKALELDPTLAQAYYNRGITRRRLEDYQGAIADYT 267
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR + VD +RGIA+ Y A+ F ++L+ P + R + RE
Sbjct: 63 TRAIELDPTLVDAYTARGIARHRSEDYVGAVEDFTEVLEIQPENSQVYGLRALDYLYLRE 122
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AAI+D I+ NP +A+ R +A+ LGE AI+D ++A+E P++ RG
Sbjct: 123 YQAAIADLNRVIEENPDDADAYMLRAEAQTELGEFQPAIRDYNRAIELSPDNPTFYRRRG 182
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D+ ++ED + + LD + AY + G A IGE + A + KA++LD
Sbjct: 183 QSRARSGDYPGSIEDFNRVIDLDANDALAYVFRGNAYDDIGESEAALADYEKALELDPTL 242
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ + + L + + A+ + + I+ + + RG++ L + AI D +
Sbjct: 243 AQAYYNRGITRRRLEDYQGAIADYTKAIKINPTDANSLLNRGVVYALLEEFPDAIADYTQ 302
Query: 611 GSRTMMPHL 619
R P+L
Sbjct: 303 AIR-FNPNL 310
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ R+ + D + R AQ G++ AI +++ ++ P P RG +RA
Sbjct: 130 LNRVIEENPDDADAYMLRAEAQTELGEFQPAIRDYNRAIELSPDNPTFYRRRGQSRARSG 189
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +I DF I + + A+ RG A +GES A+ D KALE +P A + R
Sbjct: 190 DYPGSIEDFNRVIDLDANDALAYVFRGNAYDDIGESEAALADYEKALELDPTLAQAYYNR 249
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + +D+ A+ D + +K++ + ++ G+ + + E+ A + +AI+ + N
Sbjct: 250 GITRRRLEDYQGAIADYTKAIKINPTDANSLLNRGVVYALLEEFPDAIADYTQAIRFNPN 309
Query: 550 FLEAWGHLTQFYQDLANSEKA 570
EA+ + YQ + +++ A
Sbjct: 310 LGEAYYNRGLTYQQMGDAQSA 330
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A V G++ AI +F Q LK D + G R + + AI+D+ +AI+ NP+
Sbjct: 935 GAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPN 994
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A LG + +A+ D +K L+ P D +RGIV F+ KD A+ D +
Sbjct: 995 KPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFN 1054
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL+ ++ A + + + + + K IQL +++A+ + DL +
Sbjct: 1055 DAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDH 1114
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E AL+ L + + ++AY+ R +G AI D + R
Sbjct: 1115 EGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDILSAIADFENAIR 1160
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G SAI+ F+ ++ +P Y +A G R + ++ A+ +F AIQ NP+ E
Sbjct: 1146 GDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNN 1205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + G+ A++D A++ PN A+ + G F+ DF A+ D +++
Sbjct: 1206 RGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHP 1265
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY LAL +G++ A +A++++ + A+ +L + ++ + E+A+
Sbjct: 1266 KYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDY 1325
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--SRTMMPHL 619
+VL I R AY RGL+ L + +AIKD +S +PH+
Sbjct: 1326 NEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHV 1372
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + VD RGI + AI+ F+ +K +P +PEA+ R R ++
Sbjct: 1020 TKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKD 1079
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ ++ D + IQ +P +A+ +R R LG+ A++DL A++ +PN+A+ ++R
Sbjct: 1080 NQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRA 1139
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D +A+ D ++L+ + AY +G+ G+ A E AIQ++ N+
Sbjct: 1140 NTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNY 1199
Query: 551 LEAWGH----LTQFYQ-DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E GH T+F + D+ + K E Q I+ +++AY+ G G + A+
Sbjct: 1200 AE--GHNNRGFTKFRRGDIPGAMKDFEAAIQ---INPNYAEAYNNLGNSRFQTGDFQGAM 1254
Query: 606 KDLSSGSR 613
+D R
Sbjct: 1255 RDFGETLR 1262
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI ++ G + A+ F+ ++ +P Y E RG + + ++ A+ DF AIQ NP+
Sbjct: 1173 GIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPN 1232
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ G +R G+ A++D + L P + R + K DF+ A D
Sbjct: 1233 YAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCY 1292
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K++ + AY LGL + +G+ ++A + + +++ ++A+ + Y L N
Sbjct: 1293 QALKINPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVNRGLIYLKLKNY 1352
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+A++ L I+ Y R LG+ K I DL +
Sbjct: 1353 TQAIKDQTSALNINPNLPHVYSFRSEGYIQLGEFKAGIDDLHKAA 1397
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 104/207 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G AI+ ++Q +K +P PEA RG A F + A++DFT+ +Q +P
Sbjct: 969 GVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPR 1028
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ +RG R + + AI D + A++ P + ++ R I+ KD +++DL+
Sbjct: 1029 VVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLN 1088
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L + AY + +G+++ A + A+QL N EA+ + + +
Sbjct: 1089 KVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDI 1148
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLL 594
A+ + + ++ ++ +AY+ G++
Sbjct: 1149 LSAIADFENAIRLNPKYHQAYNDMGIV 1175
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L +G + +R+ AI D+ +AI + + R A A +G AI++ KAL
Sbjct: 862 VLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKAL 921
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E EP + G + +FN A+E S +K+D ++ Y LG+ G+ + A
Sbjct: 922 ELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGA 981
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ +AI+L+ N EA+ + Y+ L +++ A+ +VL + R AY RG++
Sbjct: 982 IADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRF 1041
Query: 597 GLGQHKKAIKDLSSGSR--TMMPHLIWNLTRWRNLC 630
+ + AI D + + P I+N R L
Sbjct: 1042 EVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLT 1077
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ K + +V+ ++G+ ++ + + AI ++Q + + R A A L
Sbjct: 851 KVEKCRQEAVNVLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNL 910
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI +F +A++ P + + G A LGE EAI+ S+AL+ + + I G+
Sbjct: 911 KGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGV 970
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V FK D A+ D + +KL+ AY G+A +G + A K +QL +
Sbjct: 971 VRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVV 1030
Query: 552 EAW--------------GHLTQFYQDL--------------------ANSEKALECLQQV 577
+A+ G + F + +++ +L+ L +V
Sbjct: 1031 DAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKV 1090
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + ++ AY R ++ LG H+ A+KDL S
Sbjct: 1091 IQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSA 1124
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G A+ F+ ++ +P Y EA G +R + + A+ DF E ++ +
Sbjct: 1205 NRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIH 1264
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A LG+ A D +AL+ P + G+++ + D A+ D
Sbjct: 1265 PKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILD 1324
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLT 558
+ +++ AY GL + Y +A + A+ ++ N E + L
Sbjct: 1325 YNEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLG 1384
Query: 559 QFYQDLANSEKALECLQQVLYIDKR 583
+F + + KA E QQ +++R
Sbjct: 1385 EFKAGIDDLHKAAEIYQQQGKLEER 1409
>gi|124003389|ref|ZP_01688239.1| TPR repeat, putative [Microscilla marina ATCC 23134]
gi|123991487|gb|EAY30918.1| TPR repeat, putative [Microscilla marina ATCC 23134]
Length = 318
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 5/234 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA N G Y+ AI +++ + D + +A R AR +L A++D+ +
Sbjct: 73 GIALFNMGNYSRAIHHYNKAIALDSVLMDAYYNRANARFASDDLSGALADYNVVVAQYQD 132
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RR L +AI+DL K + EPN++D L RG + +K K + AA +DL
Sbjct: 133 SSYVFFRRATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQ 192
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLA 565
++L+K AY LGL ++ G+ A KA+++ N +EA+ G+ Y +
Sbjct: 193 KAIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEI--NVVEAYILGNRAWLYAESN 250
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+K+ + +++ L D + AY RG+ G +KA+ D + +R + HL
Sbjct: 251 QLDKSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFAK-ARKLTKHL 303
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V FR R + +Y AI D+++ +P +AL RG ++ EAA D +
Sbjct: 136 VFFR--RATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQK 193
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ N A+ G +AA G+++ A L KALE A IL R + + +
Sbjct: 194 AIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEINVVEAYILGNRAWLYAESNQLD 253
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAW 554
+ +D+ +K D ++ AY G+ G +KA + KA +L ++ LEA+
Sbjct: 254 KSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFAKARKLTKHLTDLEAY 309
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G +++ + AI +TE I+ + S E + G A +G AI +KA+
Sbjct: 35 LFLKGNVNLKKQQYKQAIYYYTEGIKRDSSFSEIYNNLGIALFNMGNYSRAIHHYNKAIA 94
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS--SIGEYKK 535
+ D + R F D + A+ D + V + S+Y + A + + Y
Sbjct: 95 LDSVLMDAYYNRANARFASDDLSGALADYNVVVA--QYQDSSYVFFRRATTYMQLKRYDD 152
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A + K I L+ N +A G + E A + LQ+ + ++KR AY GL+
Sbjct: 153 AIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQKAIELNKRQDLAYANLGLV 211
>gi|428313062|ref|YP_007124039.1| hypothetical protein Mic7113_4972 [Microcoleus sp. PCC 7113]
gi|428254674|gb|AFZ20633.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 528
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N +Y AIS ++Q ++ P +PEA G A A + E AI+ + +AIQ P+ A
Sbjct: 175 LNSQRYEEAISAYNQAVQIQPNFPEAWNNGGLALANLQRYEEAIAAYDQAIQIQPNYHLA 234
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A L EA+ +A++ +P+ ++ G + F + + ++ ++
Sbjct: 235 WSNRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQ 294
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ E A+ + G A+ ++ Y++A ++ +AI+ + LEAW + +L +E A
Sbjct: 295 IQPEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAF 354
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + FS A+ RGL+L L ++++++
Sbjct: 355 VSFDRAIQLKSDFSDAWFNRGLVLFNLKRYEESV 388
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN +Y A++ +++ ++ P P G + + +I+ F AIQ
Sbjct: 237 NRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQIQ 296
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A L EAI ++A++ +P+ + + RG+ + A
Sbjct: 297 PEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVS 356
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + A+ GL L ++ Y+++ + + IQL + E W +L
Sbjct: 357 FDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQ 416
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AL C + + + +A+ +RG++ L QH++AI
Sbjct: 417 RYAEALVCCDRAIQLKPELLEAWSVRGVVFAKLQQHEEAI 456
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +I+ F + ++ P + EA +G A + E AI+ + AI+S P EAW R
Sbjct: 281 RYQESIASFKRAIQIQPEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNR 340
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + +A +A++ + + +D RG+V F K + +V ++L +
Sbjct: 341 GVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPD 400
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G AL + Y +A +AIQL LEAW + L E+A+
Sbjct: 401 IAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACD 460
Query: 576 QVL 578
QV+
Sbjct: 461 QVI 463
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 384 RLSRGIAQVNEGKYAS-AISIFDQ--ILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+ G VN Y S IS + Q + E+P E +G + E AIS + +
Sbjct: 133 QFQGGFQPVNLQPYPSTGISSYSQAQVQSENP---EVWFLQGNELLNSQRYEEAISAYNQ 189
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+Q P+ EAW G A A L EAI +A++ +PN RG + +
Sbjct: 190 AVQIQPNFPEAWNNGGLALANLQRYEEAIAAYDQAIQIQPNYHLAWSNRGDALVNLQRYE 249
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ ++L + + + G L + Y+++ + +AIQ+ F EAW
Sbjct: 250 EALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQIQPEFNEAWYFQGNA 309
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L + E+A+ + + +A++ RG+ L L +++ A
Sbjct: 310 MLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAF 354
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +N Y AI+ +++ +K P EA RG A + E A F AIQ
Sbjct: 306 QGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKS 365
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG L E++ + ++ +P+ A++ RG + + + A+
Sbjct: 366 DFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCC 425
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L E A++ G+ + + ++++A A + IQ + W Y N
Sbjct: 426 DRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPDNPIGWYGKACCYALQGN 485
Query: 567 SEKALECLQQVLYIDKRF 584
E ++ LQ +D R+
Sbjct: 486 VELLIKNLQWTFELDSRY 503
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
R KSK ++ +RG+A +N + A FD+ ++ + +A RG +
Sbjct: 324 NRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLVLFNLKR 383
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E +++ F IQ P E W RG A L EA+ +A++ +P + RG
Sbjct: 384 YEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRG 443
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+V F E ++AC ++ ++ + IG Y KA
Sbjct: 444 VV---FAKLQQHEEAIAACDQVIQKKPD---------NPIGWYGKA 477
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 3 KRKLLDSRYR-------LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKA 55
K LL++ Y L + D +++ S + A R + L +L+ + ++
Sbjct: 330 KPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLV--LFNLKRYEES 387
Query: 56 IRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFS 114
+ D ++ +I ++ R +L+ + + CD+A+QL P LL+A+ ++G F+
Sbjct: 388 VASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRGVVFA 447
Query: 115 ALGRKEEALS 124
L + EEA++
Sbjct: 448 KLQQHEEAIA 457
>gi|220915045|ref|YP_002490353.1| hypothetical protein [Methylobacterium nodulans ORS 2060]
gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 392
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI +Y AI+ +++ ++ +P A +GRG+ +RE + A++D+ +AI+
Sbjct: 30 LNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRI 89
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + GE AI D S A+ +P D RG + +++ A+
Sbjct: 90 DPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAIA 149
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ E SAY GL ++G Y A + AI+++ N A+ + Y
Sbjct: 150 DYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFGK 209
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
++A+ + + ID ++ AY R L +G KA+ D + + H I +
Sbjct: 210 GEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNHEIAYIN 269
Query: 625 R 625
R
Sbjct: 270 R 270
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI +I+ ++R G V++G+Y AI+ + ++ DP Y +A RG + E
Sbjct: 88 RIDPKYAIAYNYR---GNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEY 144
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ EAI+ NP A+ RG +G AI D A+ EPN + RG+
Sbjct: 145 DRAIADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGL 204
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F +++ A+ D +++D SAY IG+ KA + I LD N
Sbjct: 205 AYFGKGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNHE 264
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + YQ+ N + A+ + I + + +Y +RG + + ++ +A D S
Sbjct: 265 IAYINRALIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSEA 324
Query: 612 SR 613
R
Sbjct: 325 IR 326
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q+ +AG + RG E +AI D ++A+ EP A RG V ++++
Sbjct: 21 VQALDAAG--YLNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQ 78
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +++D + AY Y G S GEY +A + AI++D + +A+ + Y
Sbjct: 79 AMADYNKAIRIDPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIY 138
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
Q+ ++A+ + + I+ AY RGL+ + +G + AI D + R H
Sbjct: 139 QNKHEYDRAIADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNH 195
>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 301
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A GKY+ AIS F Q +K DP A R A +AA++DF AI+ N
Sbjct: 90 TRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRALAYRQSNRNDAALADFNRAIEVN 149
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R G EA DL +A++ P +A H RG++ + + A+ D
Sbjct: 150 PRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITD 209
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ D + Y G +L + G+Y KA E A+ +D +AW L Y+
Sbjct: 210 FDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSG 269
Query: 566 NSEKALECLQQVLYID 581
N KA E Q+ L D
Sbjct: 270 NRTKAAESYQRALTFD 285
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E A ++ ++ + NP + EA+ RG A A LG+ EAI D S+A++ +PN+A
Sbjct: 65 QEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTN 124
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + + +AA+ D + ++++ + AY L G +A+ +AI+L+
Sbjct: 125 RALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNP 184
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ YQ N +A+ + D Y RG L G++ KAI+D
Sbjct: 185 ENAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDF 244
Query: 609 SS 610
++
Sbjct: 245 NA 246
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 486 LHERGIV---NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+H G+ N ++ +A + LS V + + AY G+A + +G+Y +A +
Sbjct: 51 MHGTGVAEVANQSPQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQ 110
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+LD N A+ + Y+ ++ AL + + ++ R + AY R LL G
Sbjct: 111 AIKLDPNNAPAYTNRALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLD 170
Query: 603 KAIKDL 608
+A DL
Sbjct: 171 EAKSDL 176
>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 837
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A LE AI+ + A++ P EAW R
Sbjct: 487 QYQEAIASYDRALEIKPDYHEAWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNR 546
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG F A+ +++ +
Sbjct: 547 GFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 606
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++G +++A ++ +A+++ + EAW + DL E+A+
Sbjct: 607 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFD 666
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L I +A++ RG L LG+ ++AI
Sbjct: 667 RALEIKPDKHEAWYNRGFALGNLGRFEQAI 696
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 545 NRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 604
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RGI A+
Sbjct: 605 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIAS 664
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G AL ++G +++A ++ +A+++ + EAW G+L
Sbjct: 665 FDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLG 724
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F Q +A+ ++ALE I +A++ RG+ L LG+ ++AI
Sbjct: 725 RFEQAIASYDRALE-------IKPDDHEAWNNRGIALGNLGRFEEAI 764
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 14/227 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G+ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 511 NRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 570
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RG F A+
Sbjct: 571 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 630
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ ++ A+ G+AL +G ++A + +A+++ + EAW G+L
Sbjct: 631 YDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLG 690
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+F Q +A+ ++ALE I +A++ RG L LG+ ++AI
Sbjct: 691 RFEQAIASYDRALE-------IKPDKHEAWYNRGFALGNLGRFEQAI 730
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + RGT + + + AI+ + A++ P EAW R
Sbjct: 453 RYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYHEAWYNR 512
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI +ALE +P+ + + RG F A+ +++ +
Sbjct: 513 GIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 572
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G AL ++G +++A ++ +A+++ + EAW G+L +F Q +A+ +
Sbjct: 573 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYD 632
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ALE I +A++ RG+ L LG+ ++AI
Sbjct: 633 RALE-------IKPDDHEAWNNRGIALDDLGRLEEAI 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A LE AI+ F A++
Sbjct: 613 NRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIK 672
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RG F A+
Sbjct: 673 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 732
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G+AL ++G +++A + +AI+++ N +A+ + Y
Sbjct: 733 YDRALEIKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSNDADAYYNKACCYGLQN 792
Query: 566 NSEKALECLQQVLYIDKRFS 585
N E A+E LQ+ + +D ++
Sbjct: 793 NVELAIENLQRAINLDVKYQ 812
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 579 NRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 638
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + + RG F A+
Sbjct: 639 PDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 698
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 699 YDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALGNLG 758
Query: 566 NSEKALECLQQVLYIDKRFSKAYH 589
E+A+ + + I+ + AY+
Sbjct: 759 RFEEAIASFDRAIKINSNDADAYY 782
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 45 KLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
KL L+ + A++ + L++ + + +D R + LE ++ I D+AL++ P
Sbjct: 447 KLYELKRYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYH 506
Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYE 131
+A+ +G A LGR EEA++ +++ E
Sbjct: 507 EAWYNRGIALDDLGRLEEAIASYDRALE 534
>gi|422303664|ref|ZP_16391015.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
gi|389791337|emb|CCI12846.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
Length = 260
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++AYH RGL + LG +KAI DL + +R +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLETAARLAL 237
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L + Y AL R A ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ Y E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYT 160
>gi|118395715|ref|XP_001030204.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89284498|gb|EAR82541.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1108
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ L+ P + +A+ RG A ++ + AI D+T+A++ A+ RG
Sbjct: 583 AIELYTISLQFYPNHFKAIFNRGFALDKLKQYDLAIKDYTKALEIENGNCYAYYNRGITY 642
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +AI+D + A+ P AD H RG K +N A++D + C++ + + +
Sbjct: 643 DRKGQYDQAIKDFTSAIALNPKKADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKS 702
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G I + ++AE+ LKA+ L + HL Y+ ++AL Q +
Sbjct: 703 FYNRGSCFEKIQDLEQAEKDFLKALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIE 762
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
D + + +Y+ RGL+ LG ++KA++D +
Sbjct: 763 FDPKQATSYNGRGLVHDKLGDYEKAMQDFTQA 794
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +Y AI + + L+ + A RG + + + AI DFT AI
Sbjct: 602 FNRGFALDKLKQYDLAIKDYTKALEIENGNCYAYYNRGITYDRKGQYDQAIKDFTSAIAL 661
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + RG A G EAIQD + +EFEPN + RG K +D A +
Sbjct: 662 NPKKADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKSFYNRGSCFEKIQDLEQAEK 721
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + L +N S +LG G+ +A + ++I+ D ++ + L
Sbjct: 722 DFLKALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKL 781
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ EKA++ Q + ++ H RG L + + ++IKD
Sbjct: 782 GDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDF 825
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A+S ++Q ++ DP + GRG + E A+ DFT+AIQ P+
Sbjct: 748 GKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHN 807
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG ++ + VE+I+D +AL+ +P + IL G+V K + ++ A+ + ++
Sbjct: 808 RGCCLRSVDKLVESIKDFEQALKLDPTNPIILSNLGLVYRKMERYDEAIFCYNKELEFGG 867
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N G + + +G YK+A + + +Q+ + A + Y+ L + A+
Sbjct: 868 INIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYERLGQFQNAINDF 927
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
V+ + + AY RG LG+ + AI+D S
Sbjct: 928 SAVIKSNPSNANAYFNRGCCYDNLGKMELAIQDYS 962
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 34/264 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
DF +RG A +G Y AI F ++ +P + ++ RG+ ++LE A DF +
Sbjct: 666 ADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKSFYNRGSCFEKIQDLEQAEKDFLK 725
Query: 441 A----------------------------------IQSNPSAGEAWKRRGQARAALGESV 466
A I+ +P ++ RG LG+
Sbjct: 726 ALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKLGDYE 785
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+QD ++A++ EP + +H RG +++D +KLD N + LGL
Sbjct: 786 KAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDPTNPIILSNLGLV 845
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ Y +A + K ++ + + + L ++A+ QVL +
Sbjct: 846 YRKMERYDEAIFCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQH 905
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSS 610
A H RG+ LGQ + AI D S+
Sbjct: 906 ALHNRGICYERLGQFQNAINDFSA 929
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K +I F+Q LK DP P L G + AI + + ++ R
Sbjct: 817 KLVESIKDFEQALKLDPTNPIILSNLGLVYRKMERYDEAIFCYNKELEFGGINIRTLNNR 876
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A LG EAI D ++ L+ + ++ LH RGI + F A+ D SA +K +
Sbjct: 877 GYSFAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPS 936
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
N +AY G ++G+ + A + + KA+++D
Sbjct: 937 NANAYFNRGCCYDNLGKMELAIQDYSKALEID 968
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FC + + I++ +RG + G+Y AI+ ++Q+L+ AL RG
Sbjct: 857 FCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYER 916
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+ + AI+DF+ I+SNPS A+ RG LG+ AIQD SKALE +
Sbjct: 917 LGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGKMELAIQDYSKALEID 968
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G Y A+ F Q ++ +P P + RG +L +I DF +A++ +P
Sbjct: 774 RGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDP 833
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G + EAI +K LEF + L+ RG K + A+ D
Sbjct: 834 TNPIILSNLGLVYRKMERYDEAIFCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDY 893
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ N+ A G+ +G+++ A I+ + + A+ + Y +L
Sbjct: 894 NQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGK 953
Query: 567 SEKALECLQQVLYIDKR 583
E A++ + L ID +
Sbjct: 954 MELAIQDYSKALEIDTK 970
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L + +AI + +L Q + NR CY +L ++ I D ++ +P+
Sbjct: 880 FAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPSNAN 939
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
AY +GC + LG+ E A+ + K E
Sbjct: 940 AYFNRGCCYDNLGKMELAIQDYSKALE 966
>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
Length = 397
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 108/206 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y +AI ++++L+E+ Y EA +G+G A + + AI + +AI+ +P+ EAW
Sbjct: 166 GDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHY 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ K +E +P + D + GI + ++ A++ ++++
Sbjct: 226 KGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINS 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + +++A E + KA QLD +LEA+ L L ++LE
Sbjct: 286 ENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIY 345
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+Q L ++ + ++ + + L LG+
Sbjct: 346 EQALKLNPEAADSWFGKAVCLSFLGR 371
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 2/214 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ ++QV GKY A+ +++ L+ P YP A G+ + + +AAI + + ++
Sbjct: 124 MAFSLSQV--GKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEE 181
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW +G A +G+ EAI KA+E +PN A+ H +G+ + A++
Sbjct: 182 NSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALK 241
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+LD EN A+ +G+ L ++ +Y +A +A KAI+++ + W + +
Sbjct: 242 AYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQM 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
E+A E ++ +D + +AY G +L L
Sbjct: 302 QRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQL 335
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A+ FD+ ++ DP + L + A + + A+ + +AI+ N + W
Sbjct: 64 GNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAEDPDIWNN 123
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +G+ EA++ KALE P+ + + + + + D+ AA+E ++ +
Sbjct: 124 MAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEENS 183
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ K A+ G+AL +G+Y +A A+ KAI+LD NF EAW + L + +AL+
Sbjct: 184 DYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKAY 243
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q+ + +D A++ G+ L L ++ +AIK
Sbjct: 244 QKTVELDPENDDAWNNMGIDLENLEKYDEAIK 275
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GIA GKY AI +D+ ++ DP + EA +G A+ + + ++
Sbjct: 190 VGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKAYQKTVEL 249
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +AW G L + EAI+ KA+E +AD+ + +G + + F A E
Sbjct: 250 DPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAE 309
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+LD E AY+ LG L+ + + ++ E + +A++L+ ++W
Sbjct: 310 TYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSW 359
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI+ D + + E D+ N+ F SQ++ + KA QLDP L+
Sbjct: 264 LENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLE 323
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
AY G + L R E+L ++E+
Sbjct: 324 AYSSLGFVLAQLRRFAESLEIYEQA 348
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 60/121 (49%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ +FN A++ +++D +N AL ++G+Y +A + KAI+
Sbjct: 53 LNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIK 112
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ + ++A++ ++ L + + A++ + L L G +K AI
Sbjct: 113 INAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAI 172
Query: 606 K 606
+
Sbjct: 173 E 173
>gi|209527262|ref|ZP_03275773.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492329|gb|EDZ92673.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 501
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ LK P +A RG A + E A+S + +A++
Sbjct: 199 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 258
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG+A + LGE +A+ +AL+++P+ + RG + ++ A+
Sbjct: 259 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSS 318
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDL 564
+K + A+ G AL +GEYK+A ++ +A++ + ++ E W L
Sbjct: 319 YDQALKYKPDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHL 378
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L A+ RG L LG++K+AI
Sbjct: 379 GEYKQAISSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAI 419
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
SRG A + G+Y A+S +DQ LK + P Y E RG A E + AIS + +A+
Sbjct: 334 FSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALT 393
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P AW RG A + LGE +AI +AL+++P+ + RG + ++ A+
Sbjct: 394 YKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAI 453
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+K ++ A+ G ALS +GEYK+A ++ +A+ ++R
Sbjct: 454 SSYDQALKYKPDDHVAWYNRGNALSDLGEYKQAISSYDEALNINR 498
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G+Y A+S +D+ LK P + E RG A E + A+S + +A++
Sbjct: 266 FNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKY 325
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDFNAAV 503
P +AW RG A LGE +A+ +AL+++ P+ + RG + ++ A+
Sbjct: 326 KPDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAI 385
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ ++ A+ G ALS +GEYK+A ++ +A++ + AW +
Sbjct: 386 SSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYNRGNALYH 445
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L ++A+ Q L A++ RG L LG++K+AI
Sbjct: 446 LGEYKQAISSYDQALKYKPDDHVAWYNRGNALSDLGEYKQAI 487
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G AIS +++ ++ P +A RG A ++ E + AIS + +A++ P
Sbjct: 167 GLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 226
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW RG A LG+ +A+ +AL+++P+ RG ++ A+
Sbjct: 227 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 286
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
+K + + G AL +GEYK+A ++ +A++ + +AW HL ++
Sbjct: 287 EALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEY 346
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--H 618
Q L++ ++AL+ Y + + + RG L+ LG++K+AI + T P H
Sbjct: 347 KQALSSYDQALK------YKKPDYHEPWFSRGNALYHLGEYKQAISSYDQ-ALTYKPDDH 399
Query: 619 LIW 621
+ W
Sbjct: 400 VAW 402
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ- 443
SRG A + G+Y A+S +DQ LK P +A RG A E + A+S + +A++
Sbjct: 300 FSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEYKQALSSYDQALKY 359
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P E W RG A LGE +AI +AL ++P+ RG ++ A+
Sbjct: 360 KKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAI 419
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+K ++ A+ G AL +GEYK+A ++ +A++ + AW + D
Sbjct: 420 SSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSD 479
Query: 564 LANSEKALECLQQVLYIDK 582
L ++A+ + L I++
Sbjct: 480 LGEYKQAISSYDEALNINR 498
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + W G R G+ AI KA+EF+P+ + RG+ ++ A+
Sbjct: 157 PADAKKWFNDGLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISS 216
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G AL +G+Y++A ++ +A++ + +AW + + DL
Sbjct: 217 YDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLG 276
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL + L F + + RG L+ LG++K+A+
Sbjct: 277 EYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAL 316
>gi|159903795|ref|YP_001551139.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
gi|159888971|gb|ABX09185.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
Length = 442
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 3/232 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D RG ++ AI F +I+ D + +A + RG + AI DF +
Sbjct: 124 IDAYFQRGQSKAELNDNQGAIEDFTKIIDIDNNFVDAYLYRGYFLMLLENNKEAIDDFNQ 183
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ +P A+ R A+ LG+ A+ D +KA+E P A ++RG + F D
Sbjct: 184 VIRIDPKNEVAYNHRACAKENLGDRKGALDDFNKAIELNPEFAMAYNDRGQMIFSSGDHK 243
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+A D + LD+E+ AY GL + +Y+ A KA+ +D F E +G
Sbjct: 244 SAFNDFDKAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAIS 303
Query: 561 YQDLANSEKALECLQQVLYIDKRFSK---AYHLRGLLLHGLGQHKKAIKDLS 609
++ + E AL L +V+ ID S+ A + RG+ H LG ++ AI D +
Sbjct: 304 KININDYESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFN 355
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 11/310 (3%)
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRN 365
D + + A LND+ E ++K DN D+ R ML E + EA +
Sbjct: 125 DAYFQRGQSKAELNDNQGAIEDFTKIIDIDNNFVDAYLYRGYFL----MLLENNKEAIDD 180
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V RI ++ + R A+ N G A+ F++ ++ +P + A RG
Sbjct: 181 FN-QVIRIDPKNEVAYN---HRACAKENLGDRKGALDDFNKAIELNPEFAMAYNDRGQMI 236
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ ++A +DF +AI + +G A+ RG + + AI D +KA+ +P +
Sbjct: 237 FSSGDHKSAFNDFDKAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEG 296
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLK 542
R I D+ +A+ DL+ +++D E A Y G+A +G+Y+ A K
Sbjct: 297 YGSRAISKININDYESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFNK 356
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
I+ D++ + + L N A+ + + + FS Y RGL L
Sbjct: 357 LIEFDQSNSDIYNRRGCAKMCLENYRGAILDFNKAIENNSTFSLPYLNRGLAKANLNNLT 416
Query: 603 KAIKDLSSGS 612
A D S
Sbjct: 417 SACSDWKKAS 426
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+IS+D L+RG+ + + Y AIS F + + DP + E R ++ +
Sbjct: 251 KAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAISKININDY 310
Query: 432 EAAISDFTEAIQSNPSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E+A+ D + ++ +P GEA RG A+ LG+ AI D +K +EF+ +++DI +
Sbjct: 311 ESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNR 370
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-------LSSIGEYKKAEE 538
RG +++ A+ D + ++ + Y GLA S+ ++KKA E
Sbjct: 371 RGCAKMCLENYRGAILDFNKAIENNSTFSLPYLNRGLAKANLNNLTSACSDWKKASE 427
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G Y AI F+++++ D + RG A+ AI DF +AI++N
Sbjct: 337 RGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNRRGCAKMCLENYRGAILDFNKAIENNS 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERG 490
+ + RG A+A L A D KA E E ++ ++L E G
Sbjct: 397 TFSLPYLNRGLAKANLNNLTSACSDWKKASELGEESAVELLKEHG 441
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 113/220 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A ++GKY AI +D+ ++ DP A +G A A Q + + AI + EAI+ +P
Sbjct: 30 QGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDP 89
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G + A G+ EAI+ +A+ +P A +G K K ++ +++
Sbjct: 90 TDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAY 149
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L+ + G +L+ G+Y +A EA+ +AI+LD + AWG+ D
Sbjct: 150 DEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGK 209
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+E + + +D + + +G+ L G+H +AI+
Sbjct: 210 YDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIE 249
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 114/222 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G + ++GKY AI +D+ ++ DP A +G + A Q + + AI + EAI+
Sbjct: 164 IGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRL 223
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ W +G + A G+ EAI+ +A+ +P A + +G+ ++ A+E
Sbjct: 224 DPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIE 283
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++LD N +A+ G++L+ G+Y +A EA+ +AI+LD AW +
Sbjct: 284 AYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQ 343
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+++++ + + ++ ++ + +G L G+H +AI+
Sbjct: 344 KKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQ 385
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 114/221 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G + ++GKY AI +D+ ++ DP A +G + Q++ + +I + EAI N
Sbjct: 97 NKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLN 156
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W +G++ A G+ EAI+ +A+ +P + +G+ ++ A+E
Sbjct: 157 PVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEA 216
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + G++L+ G++ +A EA+ +AI+LD WG+ D
Sbjct: 217 YDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQG 276
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+E + + +D + A+ +G+ L G++ +AI+
Sbjct: 277 KYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIE 317
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 8/238 (3%)
Query: 389 IAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
IA N+G KY +I +D+ + +P+ E IG+G + A Q + + AI + EA
Sbjct: 127 IAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEA 186
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ +P+ AW +G + A G+ EAI+ +A+ +P A + +G+ +
Sbjct: 187 IRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDE 246
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++LD + + + G++L G+Y +A EA+ +AI+LD AWG+
Sbjct: 247 AIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSL 306
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
D ++A+E + + +D + A+ +G L+ ++ ++IK R + P L
Sbjct: 307 ADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIR-LNPDL 363
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 113/221 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A ++GK+ AI +D+ ++ DP A +G + A Q + + AI + EAI+ +
Sbjct: 63 NKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLD 122
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW +G + + E+I+ +A+ P A+ +G ++ A+E
Sbjct: 123 PTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEA 182
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N +A+ G++L+ G+Y +A EA+ +AI+LD WG+ D
Sbjct: 183 YDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQG 242
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+E + + +D + + +G+ L G++ +AI+
Sbjct: 243 KHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIE 283
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 109/211 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G++ ++GKY AI +D+ ++ DP +G + A Q + + AI + EAI+ +
Sbjct: 199 NKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLD 258
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ W +G + G+ EAI+ +A+ +P +A +G+ ++ A+E
Sbjct: 259 PTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEA 318
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + +A+ G +L+ +Y ++ +A+ +AI+L+ + E W D
Sbjct: 319 YDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQG 378
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++A++ + + +D + A++ +G++LH
Sbjct: 379 KHDEAIQAYDEAIRLDSTDANAWYNKGVVLH 409
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E W +G A A G+ EAI+ +A+ +P A +G+ + A+E
Sbjct: 25 EDWFYQGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEA 84
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++LD + +A+ G +L+ G+Y +A EA+ +AI+LD AW + ++
Sbjct: 85 IRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDE 144
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRN 628
+++ + + ++ ++ + +G L G++ +AI+ R + P N+ W N
Sbjct: 145 SIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIR-LDPA---NVAAWGN 199
>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 504
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 116/221 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + KY AI +D+ + +P + A +G + + E AI F +A N
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW +G + LG + EA++ L+ A+ +P + L +G + + + + A+
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRV 254
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ A+ Y G AL+ +G+ ++A +A KAIQLD E W + ++
Sbjct: 255 CDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMK 314
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EKALE L + I+ ++++A++ +G + + +++ AI+
Sbjct: 315 EYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQ 355
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FCV I S +G E KY+ +I FD+ ++ +P +A G+G A +
Sbjct: 18 FCVGCIGTDDSKEF---TKKGNELFEEEKYSESIEAFDKAIELNPQNADAWAGKGMALSE 74
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ E AI + +AIQ P+ + W +G A +G EAIQ KA+E +P +
Sbjct: 75 TGKNEEAIQAYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYDKAIELDPLDGFAWY 134
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+GI F K + A++ +L+ A+ G L Y++A +A KA ++
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AW + Y +L + +A+E L + +D ++S A +G LL+ + ++++AI+
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIR 253
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
T I+K + + +++ G++ + G A+ + + DP Y AL +G R
Sbjct: 190 ATGINKKDAKAWNYK---GVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMR 246
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI +AI+ P +AW +G A +G++ EAIQ KA++ +P A+I + +
Sbjct: 247 RYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYK 306
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G ++ K++ A+E+L+ +++ + A+ G A +I EY+ A +A K I+L+
Sbjct: 307 GTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQ 366
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
AW + +A ++A++ + + ++ + S + +G L+G+G+ ++A
Sbjct: 367 NDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEA 421
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 110/211 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI + DQ ++ +P +A +G A + E AI F +AIQ +P E W +
Sbjct: 247 RYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYK 306
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + E +A+++L+KA E P A+ +++G ++ ++ A++ ++L+ +
Sbjct: 307 GTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQ 366
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N +A+ G +L + EY +A +A+ KAI+L+ W H + E+A +
Sbjct: 367 NDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFD 426
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+V+ ++ S A++ +G L +G+ ++I+
Sbjct: 427 KVIELNPENSDAWYSKGNTLRRMGKIDESIQ 457
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 107/218 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A GK AI FD+ ++ DP+ E +GTA +E E A+ + +A + NP
Sbjct: 272 KGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINP 331
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G+A + E AIQ K +E EP + +G + +++ A++
Sbjct: 332 QYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAY 391
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ +N + + G L +G+ ++AE+ K I+L+ +AW + +
Sbjct: 392 DKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGK 451
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++++ + + ++ ++ A++ R + L G+ +A
Sbjct: 452 IDESIQAYDKAIELNPDYAVAWYNRAIALDQAGKGTEA 489
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D +G+A GK AI +D+ ++ P + +G A E AI +
Sbjct: 61 NADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYD 120
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P G AW +G A + + EAIQ +A E EP A + +G V + K +
Sbjct: 121 KAIELDPLDGFAWYNKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRY 180
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++ ++K++ A+ Y G++ +G +A EA AI LD + A +
Sbjct: 181 EEAIQAFDKATGINKKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGY 240
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ E+A+ Q + I+ + +KA++ +G L+ +G++++AI+
Sbjct: 241 LLNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQ 287
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY- 130
+ N+ + +Q+ ++ IR CD+A++++P +A+ KG A + +G+ EEA+ ++K
Sbjct: 235 LSNKGYLLNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQ 294
Query: 131 ------EHALHQSADLKQFLELEELLTAAKQDRSVTCEY-----DVSNSMSSLTVSESGL 179
E ++ L + E E+ L + + +Y D + ++ E+ +
Sbjct: 295 LDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAI 354
Query: 180 NANDKMSE 187
A DK+ E
Sbjct: 355 QAFDKVIE 362
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G GK A +FD++++ +P +A +G +++ +I + +AI+
Sbjct: 406 MHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIEL 465
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
NP AW R A G+ EA S+A E
Sbjct: 466 NPDYAVAWYNRAIALDQAGKGTEAAASYSRAKEL 499
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ G+Y A+ +++ LK +P Y A +
Sbjct: 72 CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A+Q NP +AW +G L + +A++ KA+E P +
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI K + A++ ++L+ ++ A+ GL + +G Y ++ E + KA+Q++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW + +L E+ALEC ++ L ID K ++ +GL+L LG+++ A+
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDAL 308
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 105/203 (51%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F++ ++ +P A +G + E A+ + + +Q NP +AW +G LG
Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+++ KAL+ P A+ + +G+V + + A+E +++D E+ +
Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 294
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GL L +G+Y+ A E KA++++ F +AW +DL E++L+C ++ L ++ +
Sbjct: 295 GLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQ 354
Query: 584 FSKAYHLRGLLLHGLGQHKKAIK 606
++++G L LG+HK+A+K
Sbjct: 355 NKTLWYMQGKTLQKLGKHKEALK 377
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 118/228 (51%), Gaps = 8/228 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ +P +A +G+ + ++ + A+ F +AI+ NP AW
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EA++ K L+ P + +G+V + ++ ++E ++++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+ LS +G Y++A E + KA+++D + W + ++L E ALEC
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSSGSRTM 615
Q+ L I+ F+ A+ +G++L L + +KKA+K L+ ++T+
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALK-LNPQNKTL 358
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 110/206 (53%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ +++ILK +P EA +G + A+ + +A++ NP AW +
Sbjct: 69 ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVL 128
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EA++ KAL+ P AD + +G V K + A++ ++L+ +N A
Sbjct: 129 KELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRA 188
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+ L ++ Y++A + + K +QL+ +AW + + +L +++LEC ++ L
Sbjct: 189 WGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
I+ + ++A++ +G++L LG++++A+
Sbjct: 249 INPKLAEAWNNKGVVLSELGRYEEAL 274
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ L+ G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G LG EA++ KAL+ P A + + +V + ++ A
Sbjct: 78 KNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++ + A+ G L + +YKKA + KAI+L+ AWG
Sbjct: 138 LECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLH 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+AL+C +VL ++ + KA++ +GL+ + LG++ +++
Sbjct: 198 NLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESL 240
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ +++L + + +KALQ++P L +A+ KG S LGR EEAL +EK E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282
>gi|374299783|ref|YP_005051422.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552719|gb|EGJ49763.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 395
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A A+ RE +I DF +I NP + + RG + +GES +AI D +KA+ +P
Sbjct: 65 RGLAYAYAREYYKSIVDFDMSIIINPYSSLVYSDRGNSYFEIGESEQAIADWNKAILLDP 124
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ G ++ K++ A+E + +K + + AY GLA ++GEY KA +
Sbjct: 125 GNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADY 184
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI +D A+ + Y + ++AL + + I+ R + Y+ RGL +GQ
Sbjct: 185 NEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQ 244
Query: 601 HKKAIKDLS 609
H++A+ D S
Sbjct: 245 HQQALTDFS 253
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G+ AI+ +++ + DP P + G ++E AI F AI+ NP
Sbjct: 99 RGNSYFEIGESEQAIADWNKAILLDPGNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A ALGE ++AI D ++A+ +P A + RG K + + A+ D
Sbjct: 159 KYALAYNNRGLAYHALGEYIKAIADYNEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDY 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ Y GL + +G++++A KA++L+ + E + + Y L N
Sbjct: 219 NKAIKINPRLGRTYNNRGLTHARMGQHQQALTDFSKAVELESDNSEVYYNRGLTYNILGN 278
Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
+KA++ + ID + SKA++
Sbjct: 279 HQKAIQDYIMAIRIDPKLSKAHN 301
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G + +Y AI F+ +K +P Y A RG A E AI+D+ EAI
Sbjct: 131 VSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADYNEAILI 190
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + + + +A+ D +KA++ P + RG+ + + A+
Sbjct: 191 DPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQHQQALT 250
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--- 561
D S V+L+ +N Y GL + +G ++KA + ++ AI++D +A +L Y
Sbjct: 251 DFSKAVELESDNSEVYYNRGLTYNILGNHQKAIQDYIMAIRIDPKLSKAHNNLAFTYATA 310
Query: 562 --QDLANSEKAL 571
L N E+AL
Sbjct: 311 NPPQLRNMEEAL 322
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AI ++D +LA +Y NR YS++E ++ + D +KA++++P L + Y
Sbjct: 180 AIADYNEAI-LIDPMLAWAYN-----NRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYN 233
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G + +G+ ++AL+ + K E
Sbjct: 234 NRGLTHARMGQHQQALTDFSKAVE 257
>gi|300870878|ref|YP_003785749.1| hypothetical protein BP951000_1259 [Brachyspira pilosicoli 95/1000]
gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 233
Score = 93.2 bits (230), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI +D S RG + + G+Y AI +D ++ D Y A RG A+ + E
Sbjct: 37 NKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRGLAKDYLGE 96
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI D+ +AI+ + +A+ RG + LG+ EA++D +K +E PN +D + RG
Sbjct: 97 YEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELNPNDSDAYYNRG 156
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V + A++D ++L+ N + Y G++ ++ EY +A + + KA++LD N+
Sbjct: 157 TVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYKKALELDPNY 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 74/134 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G+Y AI +D+ ++ D Y +A RG + + E A+ DF + I+ N
Sbjct: 86 NRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELN 145
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG + LG+ EAI+D KA+E PN+ + RG+ +++N A++D
Sbjct: 146 PNDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKD 205
Query: 506 LSACVKLDKENKSA 519
++LD +A
Sbjct: 206 YKKALELDPNYDTA 219
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 93/182 (51%)
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + E AI + ++I+ + + A+ RG +A LGE EAI+D A+E + N
Sbjct: 24 SLEGKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYA 83
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ ++ A++D ++LD + AY G+ + +G+Y++A + K I+
Sbjct: 84 YNNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIE 143
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ N +A+ + L E+A++ + + ++ Y+ RG+ L ++ +A+
Sbjct: 144 LNPNDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEAL 203
Query: 606 KD 607
KD
Sbjct: 204 KD 205
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 34/147 (23%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI +K++E + N + + RG V ++ A++D ++LD AY
Sbjct: 27 GKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLA +GEY++A + + KAI+LD ++
Sbjct: 87 RGLAKDYLGEYEEAIKDYDKAIELDSDY-------------------------------- 114
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLS 609
S AY+ RG++ + LG++++A+KD +
Sbjct: 115 --SDAYNNRGIVKNILGKYEEAVKDFN 139
>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
Length = 658
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + +G Y AI+ + Q + D P G A + LE AI+D+++AI +
Sbjct: 176 RGNAYLRKGDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDA 235
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ R A G++ +A+ D ++A+ +P A+ R + + +D++ A+ D
Sbjct: 236 NHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADY 295
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + AY G S E +A ++KA D N++ A+ +L + D +
Sbjct: 296 DQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNLGLAWWDKGD 355
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ Q + +D +++ AY+ RGL Q+ AI D +
Sbjct: 356 LDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYN 398
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R A G++ AI+ +D+ + +P EA RG +++ + A++D+ +AI+
Sbjct: 71 FNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIEL 130
Query: 445 NPSAGEAWKRRGQARAALG-ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP A+ RG + + V+AI D KA+ +P + + + RG + D++ A+
Sbjct: 131 NPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAI 190
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
S + LD ++ + Y LGLA ++ G ++A + +AI LD N EA+ +
Sbjct: 191 TSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVK 250
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++++AL + + +D ++ + R + + +AI D
Sbjct: 251 RGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIAD 294
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++G AIS FDQ + DP Y A RG AR + + + AI+D+ AI +
Sbjct: 347 GLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAG 406
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ RG A G+ AI D +A++ +P+ AD RG D+ A+ DL
Sbjct: 407 FVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLD 466
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+++ ++ A+ GLA+ +Y A + +AI+L
Sbjct: 467 QAIRIGPKSARAHDTRGLAMVYKADYAGALADYDEAIRL 505
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++++ +Y AI+ ++ + D + A RG A + + + AI+DF +AI +P
Sbjct: 380 RGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDP 439
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG++R + +AI DL +A+ P SA RG+ D+ A+ D
Sbjct: 440 DDADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADY 499
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
++L +N SAY G+A G KA+
Sbjct: 500 DEAIRLSPKNASAYRNRGIASFYFGPPAKAQ 530
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +G AI+ + Q + D + EA R A + + + A+SD+TEAI+ +P
Sbjct: 211 GLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPG 270
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E ++ R + + AI D +A+ F PN A + RG + + + A+ D
Sbjct: 271 DAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYV 330
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
D AY LGLA G+ +A A +A+ +D + A+ D
Sbjct: 331 KATAFDPNYVLAYDNLGLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQY 390
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ + ID F AY RG + GQ AI D
Sbjct: 391 DLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADF 431
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A R A E + AI+D+ +AI NP EA+ RG + A+ D KA+
Sbjct: 69 AYFNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAI 128
Query: 477 EFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
E P A RG++ K D+ A+ D ++LD EN Y G A G+Y +
Sbjct: 129 ELNPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQ 188
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AI LD + +L + N E+A+ Q + +D ++AY R
Sbjct: 189 AITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAW 248
Query: 596 HGLGQHKKAIKDLSSGSR 613
G +A+ D + R
Sbjct: 249 VKRGDTDQALSDYTEAIR 266
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G++ AI+ FDQ + DP +A +GRG +R ++ + AI+D +AI+
Sbjct: 413 NRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIG 472
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A RG A + A+ D +A+ P +A RGI +F F A D
Sbjct: 473 PKSARAHDTRGLAMVYKADYAGALADYDEAIRLSPKNASAYRNRGIASFYFGPPAKAQAD 532
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
+ + +L LA G+
Sbjct: 533 FEQAAAIKPGDSYHAIWLDLARRRNGQ 559
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 7/244 (2%)
Query: 376 SKSISVD------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
S++IS+D +R R A V G A+S + + ++ DP E R +R
Sbjct: 228 SQAISLDANHAEAYRW-RADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKR 286
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+D+ +AI P+ A+ RG + E+ AI D KA F+PN
Sbjct: 287 DYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNL 346
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + D + A+ V +D + AY GLA +Y A + AI +D
Sbjct: 347 GLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAG 406
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F+ A+ + + + A+ Q + D + AY RG + KAI DL
Sbjct: 407 FVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLD 466
Query: 610 SGSR 613
R
Sbjct: 467 QAIR 470
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 111/255 (43%), Gaps = 6/255 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPM 413
+N RN +F K+I+ + + + RG+ ++ + A++ +D+ ++ +P
Sbjct: 74 ANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIELNPQ 133
Query: 414 YPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
A RG + + AI+DF +AI+ +P + RG A G+ +AI
Sbjct: 134 IAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAITSY 193
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S+A+ + + G+ + A+ D S + LD + AY + A G+
Sbjct: 194 SQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGD 253
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A + +AI+LD E + + + ++ + ++A+ Q + + AY+ RG
Sbjct: 254 TDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRG 313
Query: 593 LLLHGLGQHKKAIKD 607
+ + +AI D
Sbjct: 314 WMWSLKHETDRAIVD 328
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + RG +++ + Y AI+ DQ ++ P A RG A ++ + A++D+ E
Sbjct: 442 ADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADYDE 501
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
AI+ +P A++ RG A G +A D +A +P
Sbjct: 502 AIRLSPKNASAYRNRGIASFYFGPPAKAQADFEQAAAIKP 541
>gi|126178012|ref|YP_001045977.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125860806|gb|ABN55995.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
Length = 562
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G AI +D+++ +P +A + RGTA A +R EAAI + + P
Sbjct: 116 RGHALRKIGLSPEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEP 175
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG L +AI +A+ +PN A+ + RG K ++ A+
Sbjct: 176 KNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCF 235
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L ++ + G AL ++ Y++A + + +A +++ ++ W H + L
Sbjct: 236 DRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKR 295
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ +L C + L ++ ++ +H +GLL L ++ AI+ LS + H
Sbjct: 296 YDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGH 347
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 5/265 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + +D L+RG A E +Y +AI +D+++ +P A RGT
Sbjct: 132 CYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLL 191
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI+ + +A+ +P+ E W RG A +AL EAI +A+ P+ A+ +
Sbjct: 192 SRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYN 251
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + A++ +++ + + + L + Y + +A++++
Sbjct: 252 RGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKRYDLSLACFDRALRVNA 311
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E W Y L A+ECL Q L + + A + RG + LG + AI D
Sbjct: 312 VDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYALGNCEAAI-DC 370
Query: 609 SSGSRTMMPHLIWNLTRWRNLCFNA 633
+ P N W N C NA
Sbjct: 371 YRAVVRLNPE---NAVAWNN-CGNA 391
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + + +RG A N +Y A+ +++ + +P YP + T
Sbjct: 234 CFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKL 293
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + +++ F A++ N E W ++G L +AI+ LS+AL+ +P D +
Sbjct: 294 KRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYY 353
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + AA++ A V+L+ EN A+ G AL + Y++A + +A+++D
Sbjct: 354 RGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDP 413
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W + L++ +KAL C Q L + A++ +G+ L LG++ +A+
Sbjct: 414 ENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAV 470
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +G A +G+Y A+ +DQ ++++ +A +G A A R A+ F
Sbjct: 7 SVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFD 66
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ ++ +P+ G W RGQ LGE EAI +A++ P+SA+ RG K
Sbjct: 67 QVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLS 126
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E V L+ A+ G AL++ Y+ A E + + + L+ AW
Sbjct: 127 PEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGT 186
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ E A+ Q + ID ++ ++ RG L L ++ +AI
Sbjct: 187 IETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAI 232
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + + + D +G+A ++ A+ FDQ+++ DP + RG
Sbjct: 30 CYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFDQVVRIDPTCGRFWLARGQTLYDL 89
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI +A++ P + AW RG A +G S EAI+ + + EPN D
Sbjct: 90 GECREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLSPEAIECYDRVVALEPNRIDAWLA 149
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + AA+E V L+ +N +A+ G + + Y+ A ++ +A+ +D
Sbjct: 150 RGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDP 209
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E W + L ++A+ C + + + ++ ++ RG L L ++++A+
Sbjct: 210 NHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCY 269
Query: 609 SSGSRTMMPHL-IWN 622
R + IWN
Sbjct: 270 ERAFRINPDYPGIWN 284
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 34/271 (12%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + + + +RG + +Y AI+ + Q + DP + E RG A +
Sbjct: 166 CYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSAL 225
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------- 481
+ + AI F AI P E W RG+A L EA+ +A P+
Sbjct: 226 KRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNH 285
Query: 482 ---------------------------SADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
A+I H++G++ F K + A+E LS +KL
Sbjct: 286 KATVLKKLKRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQP 345
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A Y G + ++G + A + + ++L+ AW + L + E+AL C
Sbjct: 346 GHTDAEYYRGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCY 405
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ L ID + ++ + +L L + KA+
Sbjct: 406 ERALEIDPENRRVWNNKASVLSVLSHYDKAL 436
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + ++ + +G+ +Y AI Q LK P + +A RG +
Sbjct: 302 CFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYAL 361
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
EAAI + ++ NP AW G A L EA+ +ALE +P + + +
Sbjct: 362 GNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDPENRRVWNN 421
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ V ++ A+ + EN A+ G+AL +G Y +A + +++D
Sbjct: 422 KASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAVTCYAHVLEIDP 481
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVL 578
E W + L SE+ALEC L
Sbjct: 482 ARAEVWNTMGNALVILERSEEALECYDLAL 511
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAW ++G+A A G+ A++ +A+ + D + +G+ + A+E
Sbjct: 9 EAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFDQV 68
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
V++D + G L +GE ++A + +A++L + AW + + S +
Sbjct: 69 VRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLSPE 128
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A+EC +V+ ++ A+ RG L +++ AI+
Sbjct: 129 AIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIE 165
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L ++ A+ G A + G+Y +A E + +AI+ + +AW H +
Sbjct: 1 MELPWKSVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHRE 60
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
ALEC QV+ ID + + RG L+ LG+ ++AI
Sbjct: 61 ALECFDQVVRIDPTCGRFWLARGQTLYDLGECREAI 96
>gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
Length = 702
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI+ F++ L+ P YPEA G+G A + E AI+ + +A++S P+ +AW +
Sbjct: 415 KYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSK 474
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + A +A+E + +++ + G V + AVE V+
Sbjct: 475 GIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPT 534
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL + +Y+ A +A+ +A+ L N+ +AW +L L E A++
Sbjct: 535 YYQAWYSRGIALMKLRQYEDAAKAYKQAVTLKGNYYQAWYNLGWSLHQLRRYEDAIDAYN 594
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+VL + R +A++ +G L+ L ++++AI
Sbjct: 595 KVLDLQSREYQAWYNKGNALYNLKRYEEAI 624
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G A +N +Y AI+ +++ +K P + +A +G A ++ + A + +A++
Sbjct: 439 GKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELK 498
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW G + L ++ EA++ KA+ F+P + RGI K + + A +
Sbjct: 499 SDNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYEDAAKA 558
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V L A+ LG +L + Y+ A +A+ K + L +AW + +L
Sbjct: 559 YKQAVTLKGNYYQAWYNLGWSLHQLRRYEDAIDAYNKVLDLQSREYQAWYNKGNALYNLK 618
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+A+ + +Y+ + +A++ RG L L +++ AI R
Sbjct: 619 RYEEAIASYNEAVYVKPDYYEAWYSRGNGLLELKRYQDAIASYDKAVR 666
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ ++Q +K Y E + A ++ + + +AIQ N
Sbjct: 337 TRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESREACDKAIQLN 396
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L + EAI +ALE +P+ + +G + + A+
Sbjct: 397 PEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIAS 456
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
VK A+ G+A ++ +Y+ A +A+ +A++L + +AW +L +L
Sbjct: 457 YEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELN 516
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+++A+E ++ + + +A++ RG+ L L Q++ A K
Sbjct: 517 KNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYEDAAK 557
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F +A LH RG + + A+ + +K+ + + AL + +YK++
Sbjct: 327 FNSANATELHTRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESR 386
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
EA KAIQL+ +LEAW L ++A+ ++ L I + +A+ +G L
Sbjct: 387 EACDKAIQLNPEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLN 446
Query: 598 LGQHKKAI 605
L ++++AI
Sbjct: 447 LQRYEEAI 454
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++++L +A +G A + E AI+ + EA+ P EAW R
Sbjct: 585 RYEDAIDAYNKVLDLQSREYQAWYNKGNALYNLKRYEEAIASYNEAVYVKPDYYEAWYSR 644
Query: 456 GQARAALGESVEAIQDLSKALEFEPN 481
G L +AI KA+ ++P+
Sbjct: 645 GNGLLELKRYQDAIASYDKAVRYKPD 670
>gi|124023008|ref|YP_001017315.1| hypothetical protein P9303_13031 [Prochlorococcus marinus str. MIT
9303]
gi|123963294|gb|ABM78050.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F G A+V Y AI+ + + + +P +A RG A++ + + AI+DF +AI
Sbjct: 20 FYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAI 79
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP A+ RG A++ LG+ AI D ++A+E P RG+ + A
Sbjct: 80 EINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEA 139
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + + ++ + +AY GLA + +Y+ A + KAI ++ A+ +
Sbjct: 140 IADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKG 199
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWN 622
+++ A+ + + ID +++ AY RGL + LG ++ AI D S + + P ++
Sbjct: 200 KSGDNQGAVADFNKAIEIDLQYADAYINRGLTQYNLGDNQGAIADYSEAIQ-IDPQDVF- 257
Query: 623 LTRWRNLCFNAWPFIRRRLLCTRLLKST 650
+ N + W + C K+
Sbjct: 258 --AYNNRGYATWKLKDYQSACNDFKKAA 283
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQIL 408
K++ N R++ + SK+I++ D +RG+A+ G AI+ F++ +
Sbjct: 20 FYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAI 79
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P A RG A++ + + AI+D+ AI+ NP + RG A+ L + EA
Sbjct: 80 EINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEA 139
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D + A+ P A ++RG+ KD+ A+ D + + ++ ++ +AY G
Sbjct: 140 IADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKG 199
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSK 586
G+ + A KAI++D + +A+ + LTQ+ +L +++ A+ + + ID +
Sbjct: 200 KSGDNQGAVADFNKAIEIDLQYADAYINRGLTQY--NLGDNQGAIADYSEAIQIDPQDVF 257
Query: 587 AYHLRGLLLHGLGQHKKAIKDL----SSGSRTMMPHLIWNLTRWRNLCFNAW 634
AY+ RG L ++ A D S GS++ +W N AW
Sbjct: 258 AYNNRGYATWKLKDYQSACNDFKKAASLGSQST--------AQWLNKEDGAW 301
>gi|119356061|ref|YP_910705.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119353410|gb|ABL64281.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
DSM 266]
Length = 308
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G + A+ F++ L DP A RG AAI+D+T AI+ NP
Sbjct: 34 GIVKGRSGDTSGALDDFNRALILDPKNSGAYYNRGLVNGQLGNFSAAIADYTSAIKLNPH 93
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG A AA G AI D+SKA+ +P ++ + RG V KD+ A+ED +
Sbjct: 94 FPGTYNNRGFAHAATGNYRAAIIDISKAIALDPLIPELYNNRGTVKMSLKDYIGAIEDFT 153
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L+ + + GLA S G A E A+ D+ + AW + +
Sbjct: 154 KAARLNPKLAGPFNNRGLAKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNARLSSGDF 213
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+E ++ L + +AY+ R LG ++ A+ D++
Sbjct: 214 NGAIEDYKKALVLQPDLIEAYNNRAFAKASLGDYRGAVDDMN 255
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G +++AI+ + +K +P +P RG A A AAI D ++AI +
Sbjct: 66 NRGLVNGQLGNFSAAIADYTSAIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIALD 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + RG + +L + + AI+D +KA P A + RG+ + A+ED
Sbjct: 126 PLIPELYNNRGTVKMSLKDYIGAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGAIED 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + D+ +A+ G A S G++ A E + KA+ L + +EA+ + L
Sbjct: 186 FTLALVRDQTYDAAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLIEAYNNRAFAKASLG 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A++ + ++ + Y+ RGL LG AI D
Sbjct: 246 DYRGAVDDMNILIEKGTENAMTYYNRGLAKKMLGDLNGAIADF 288
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 373 ISKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I SK+I++D + +RG +++ Y AI F + + +P RG A++
Sbjct: 116 IDISKAIALDPLIPELYNNRGTVKMSLKDYIGAIEDFTKAARLNPKLAGPFNNRGLAKSL 175
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ AI DFT A+ + + AW RG AR + G+ AI+D KAL +P+ + +
Sbjct: 176 AGNIMGAIEDFTLALVRDQTYDAAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLIEAYN 235
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
R D+ AV+D++ ++ EN Y GLA +G+ A LKA L
Sbjct: 236 NRAFAKASLGDYRGAVDDMNILIEKGTENAMTYYNRGLAKKMLGDLNGAIADFLKASNL 294
>gi|425441210|ref|ZP_18821493.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
gi|389718158|emb|CCH97859.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
Length = 506
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 275 RQSSDDFDICNG----PIDKASVNERHGRQT---NGTHDVHDKLSSDSASLNDSNTNSES 327
R++SD FD +G P DK + ER R+ +G D + + + +
Sbjct: 173 RRASDFFDWYSGVYEFPTDK-DILEREIRRLVYLDGDLDTYQQFTPQQRQEKLAEI---- 227
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR--- 384
K+ +SD+ S D ++ S+L K ++ + E ++ + K+ I D+
Sbjct: 228 --KAYLSDSPSLDPVQT-SELWHKKGLIHQMGKEYEQ----AIASYDKALEIKPDYHEAW 280
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A N G+ AI+ +DQ L+ P Y EA RG A E AI+ + A++
Sbjct: 281 YNRGVALGNLGRLEEAIASYDQALEFKPDYHEAWNNRGIALRNLGRFEQAIASYDRALEF 340
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG +AI +ALEF+P+ + + RGI A+
Sbjct: 341 KPDKHEAWNNRGNALFNLGRFEQAIASYDQALEFKPDYHEAWYNRGIALGNLGRLAEAIA 400
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + A+ G AL ++G ++A ++ +A++++ N+ + + Y
Sbjct: 401 SYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEINSNYANTYYNKACCYGLQ 460
Query: 565 ANSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D ++
Sbjct: 461 NNVELAIENLQRAINLDVKY 480
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +Y AI+ +D+ L+ P Y EA RG A LE AI+ + +A++ P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG +AI +ALEF+P+ + + RG F F A+
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + A+ G+AL ++G +A ++ +A++ +F EAW + +L
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGR 428
Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
E+A+ + L I+ ++ Y+
Sbjct: 429 LEQAIASYDRALEINSNYANTYY 451
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G +E E AI+ + +A++ P EAW RG A LG EAI +ALEF+P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RGI F A+ ++ + A+ G AL ++G +++A ++
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368
Query: 541 LKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A++ ++ EAW G+L + + +A+ ++ALE F +A++ RG
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALE-------FKPDFHEAWYNRGN 421
Query: 594 LLHGLGQHKKAI 605
L LG+ ++AI
Sbjct: 422 ALGNLGRLEQAI 433
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ A AI+ +D+ L+ P + EA RG A LE AI+ + A++ N
Sbjct: 384 NRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEIN 443
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
+ + + L +VE AI++L +A+ + D+
Sbjct: 444 SNYANTYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 483
>gi|431808131|ref|YP_007235029.1| hypothetical protein BPP43_07840 [Brachyspira pilosicoli P43/6/78]
gi|430781490|gb|AGA66774.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 595
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 34/191 (17%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG A++ E AI D+ +AI+ NP++ E + RG A++ LG EAI+D KA+
Sbjct: 352 AYYNRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAI 411
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E PN+++ + RG + + + A++D + ++L+ N AY +G A S++G ++A
Sbjct: 412 ELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEA 471
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ + K I+L+ N +S AY+ RG+ H
Sbjct: 472 IKIYDKVIELNPN----------------------------------YSNAYNNRGVSKH 497
Query: 597 GLGQHKKAIKD 607
L ++K+AIKD
Sbjct: 498 KLEKYKEAIKD 508
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y AI FD+ ++ +P EA RG +++ E AI D+ +AI+ N
Sbjct: 389 NRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELN 448
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ G A++ LG + EAI+ K +E PN ++ + RG+ K + + A++D
Sbjct: 449 PNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKD 508
Query: 506 LSACVKLDKENKSAY 520
++L+ N AY
Sbjct: 509 YDKAIELNPSNSDAY 523
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + AI +D+ ++ +P E RG A+++ + AI DF +AI+ N
Sbjct: 355 NRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELN 414
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG ++ L EAI+D +KA+E PN+++ + G A++
Sbjct: 415 PNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKI 474
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ +AY G++ + +YK+A + + KAI+L+ + +A+ ++ Q LA
Sbjct: 475 YDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSNSDAYFNMVLPKQLLA 534
Query: 566 NS---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
N+ EK L + Y D F Y+L L +KAI G M+
Sbjct: 535 NTTEDEKEKNKLIEEAYND--FINGYNLADDKLKD-KYKQKAINFAKQGYNVMI 585
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 48 SLRNWSKAIRILDSLL-------AQSYEIQDIC-----NRAFCYSQLELHKHVIRDCDKA 95
S+ ++K I + D LL + Y+ ++ C NR S L+ ++ I+D DKA
Sbjct: 317 SINYYNKIIEMTDELLKGYDENSEEYYQYKNYCFIAYYNRGNAKSDLDYNEEAIKDYDKA 376
Query: 96 LQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE------HALHQSADLKQFLELEEL 149
++L+P + Y +G A S LG +EA+ ++K E A + ++K +LEL E
Sbjct: 377 IELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYE- 435
Query: 150 LTAAKQDRSVTCEYDVSNS---------MSSLTVSESGLNANDKMSETSENH 192
A +D + E + +NS S+L +E + DK+ E + N+
Sbjct: 436 --EAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNY 485
>gi|434389920|ref|YP_007100354.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
gi|428021916|gb|AFY97252.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
Length = 1126
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ ++ I+ +F +GI N G++ A+S F++ ++ +P + +A RG +
Sbjct: 145 IASFERAIEIAPNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLG 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ E A+S+F A++ P+ +W RG A +G +AI +A+E + + +I
Sbjct: 205 NLNKFEEAVSNFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIW 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+RG + A+ + + + + + G+ L I +Y++AE + +AIQ+
Sbjct: 265 RDRGFAQINLDRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQI 324
Query: 547 DRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ +F EAW L F+ LA ++ ++ + + ++ +A+ +GL L +GQ+K A
Sbjct: 325 NPDFFEAWCERGLVCFF--LARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNA 382
Query: 605 I 605
I
Sbjct: 383 I 383
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG G+Y I+ + Q +K P Y + +G A + + E +I+ F AI+
Sbjct: 95 FSRGYNLFGLGRYEEEIANYKQAIKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEI 154
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ W +G LG +A+ + ++A+E EPN +RG F AV
Sbjct: 155 APNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVS 214
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + V+++ + ++ GLAL IG Y+ A + +AI++D + E W +L
Sbjct: 215 NFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINL 274
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E+A+ ++ L I + LRG+LL + ++++A
Sbjct: 275 DRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEA 314
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G+Y AI F++ ++ D PE RG A+ E AI + +
Sbjct: 233 RGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSYERYLNIQI 292
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W RG + + EA L +A++ P+ + ERG+V F ++
Sbjct: 293 NDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASY 352
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQ 559
++L+ + A+ GL L +IG+YK A ++ +AI++ ++ EAW + +++
Sbjct: 353 DRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISK 412
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + +AN ++A+E I+ F ++ RG+ L LGQ+ +AI +
Sbjct: 413 YKEAIANYDRAIE-------INPDFHLVWYNRGISLEHLGQYSEAIPNF 454
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ G+Y +AI+ +D+ ++ P Y EA RG+A + + AI+++ AI+
Sbjct: 367 FGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEI 426
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP W RG + LG+ EAI + +A++ +P+ L G+ + A+
Sbjct: 427 NPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAII 486
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQD 563
+L+ +++ + A+ LG+ L ++G+YK+A ++ ++I+L N + W + Y
Sbjct: 487 NLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIASYEQSIKLKPDNLYQVWANRGAAYGR 546
Query: 564 LANSEKALECLQQVL 578
+ + Q L
Sbjct: 547 FKGYQSQINAYYQAL 561
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 371 TRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
T + ++ I+ DF RG+ + +I+ +D+ ++ + EA G+G
Sbjct: 316 TSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKT 375
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + AI+ + AI+ P EAW RG A A+ + EAI + +A+E P+ + +
Sbjct: 376 IGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWY 435
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI ++ A+ + +KL ++ + LG+AL ++G YK+A AI++
Sbjct: 436 NRGISLEHLGQYSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIK 495
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+F +AW L ++L ++A+ +Q
Sbjct: 496 PDFSDAWCSLGVVLENLGQYKEAIASYEQ 524
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG AQ+N +Y AI +++ L RG + + E A + AIQ NP
Sbjct: 267 RGFAQINLDRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINP 326
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG L + ++I +A+E + + +G+ + A+
Sbjct: 327 DFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNAIASY 386
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
+++ + A++ G AL +I +YK+A + +AI+++ +F W HL Q
Sbjct: 387 DRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLGQ 446
Query: 560 FYQDLANSEKALEC---------------------------LQQVLYIDKRFSKAYHLRG 592
+ + + N E+A++ L + I FS A+ G
Sbjct: 447 YSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLG 506
Query: 593 LLLHGLGQHKKAI 605
++L LGQ+K+AI
Sbjct: 507 VVLENLGQYKEAI 519
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L G G Q EL + +S E W RG LG E I + +A
Sbjct: 63 EGLAGLG-----QGELAETAGQLIRSWESEIDDAETWFSRGYNLFGLGRYEEEIANYKQA 117
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ P+ + +GI ++ +++ + + G+ L ++G ++
Sbjct: 118 IKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFHAGWYGQGIELDNLGRFED 177
Query: 536 AEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
A +AI+++ NF +AW G+L +F + ++N +A+E I+ S ++
Sbjct: 178 AVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVE-------IEPNHSPSW 230
Query: 589 HLRGLLLHGLGQHKKAI 605
H RGL L +G+++ AI
Sbjct: 231 HCRGLALGQIGRYEDAI 247
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A KY AI+ +D+ ++ +P + RG + + AI +F AI+
Sbjct: 402 NRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLK 461
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ R G A LG EAI +L+ A+E +P+ +D G+V + A+
Sbjct: 462 PDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIAS 521
Query: 506 LSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR--NFLEAWG------- 555
+KL +N + G A Y+ A+ +A+Q + + WG
Sbjct: 522 YEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQINAYYQALQEIQCNEHPDHWGFLYRDIG 581
Query: 556 --HLTQFYQDLANSE----KALECLQQVL 578
H + +DL NSE AL+ Q+L
Sbjct: 582 RRHYHEGNRDLENSEIYYNLALDGFYQIL 610
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A GE E L ++ E E + A+ RG F + + + +K+ +
Sbjct: 64 GLAGLGQGELAETAGQLIRSWESEIDDAETWFSRGYNLFGLGRYEEEIANYKQAIKIYPD 123
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ Y G+AL +G+ +++ + +AI++ NF W +L E A+
Sbjct: 124 YFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFHAGWYGQGIELDNLGRFEDAVSNFN 183
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + I+ F +A+ RG L L + ++A+ + +
Sbjct: 184 RAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFN 217
>gi|449130250|ref|ZP_21766471.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
gi|448943089|gb|EMB23982.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
Length = 329
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ +P +A+ +G
Sbjct: 54 AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + K ++ A+++++A +KL+ + S
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL S+ +Y +A + + K+IQ+D N+++++ L Y L +AL+ L + +
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIA 233
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
I+ + Y RG +L L ++++AIKD
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKD 260
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S E + G + AI +KA+E +P + RG + + + A+
Sbjct: 31 NYSQAEYFNIAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L + AY + GL + G Y KA E AI L+ E + ++ Y L
Sbjct: 91 DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+KAL+ + + ++ + Y +GLL + + ++ +AIK+
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKE 193
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI ++ ++IQ +P+ +++K L + +EA+ L++A+ P+ + RG +
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A++D + +KL+ N +Y GL + YKKA E AI+ N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304
>gi|404477129|ref|YP_006708560.1| hypothetical protein B2904_orf2487 [Brachyspira pilosicoli B2904]
gi|404438618|gb|AFR71812.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
Length = 537
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G Y AI FD+ ++ D Y A RG ++A E AI DF +AI+ N
Sbjct: 331 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIELN 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A+ L + EAI+D KA+E PN+ D + RG + A++D
Sbjct: 391 PNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKD 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL N AY + L + + E K I+ EA+ + Y+ LA
Sbjct: 451 FDKAIKLKANNAQAYLNMILPKQLLANITENEREKNKLIE------EAYNDFFEGYK-LA 503
Query: 566 NSEKALECLQQVL 578
+++ E Q+++
Sbjct: 504 DNKLKDEYKQKII 516
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A+ LG EAI+D KA+E + N + RGI K + A++D + +
Sbjct: 328 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 387
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQD 563
+L+ AY G A +++ +Y++A + + KAI+L+ N L+A+ + L Q+ +
Sbjct: 388 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEA 447
Query: 564 LANSEKALEC 573
+ + +KA++
Sbjct: 448 IKDFDKAIKL 457
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 17 HKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEIQD 71
+ I + D+ + +DS SA R I AKL ++++++KAI L+ ++++Y
Sbjct: 343 EEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE-LNPNISEAYN--- 398
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR + L+ ++ I+D DKA++L+P L AY +G A + L + +EA+ ++K
Sbjct: 399 --NRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKDFDKA 454
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQD------------ICNRAFCYSQLELHKHVIRDCDK 94
S+ ++K I + D+LL + E + NR + L L++ I+D DK
Sbjct: 292 LSINYYNKIIEMTDNLLKEYDENSEKYSKYKNNYLIAYNNRGIAKNNLGLYEEAIKDFDK 351
Query: 95 ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
A++LD L AY +G + + LG EEA+ + K E
Sbjct: 352 AIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE 388
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI LDS +Y NR ++L ++ I+D +KA++L+P + +AY
Sbjct: 345 AIKDFDKAIE-LDSNYLSAYN-----NRGISKAKLGNNEEAIKDFNKAIELNPNISEAYN 398
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A + L + EEA+ ++K E
Sbjct: 399 NRGNAKNNLKQYEEAIKDYDKAIE 422
>gi|428210653|ref|YP_007083797.1| hypothetical protein Oscil6304_0120 [Oscillatoria acuminata PCC
6304]
gi|427999034|gb|AFY79877.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 995
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q G + A++ +++ ++ YP+A RG A+ + E AI+ F EAI
Sbjct: 67 RGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASFNEAIHFKR 126
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A+ LG++ +AI ++A+ +PN D + RG+V + A+
Sbjct: 127 DFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASF 186
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
+ + L AY GL S +G+Y+ A + +AI+L +F +A+ H D L
Sbjct: 187 NEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLK 246
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E A+ + + F AY RG+ LGQ++ AI + R
Sbjct: 247 QYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIR 294
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+AQ G+ AI+ F++ + P +P+A RG + + E AI+ F EA
Sbjct: 130 DAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASFNEA 189
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFN 500
I P+ +A+ RG ++ LG+ +AI ++A+ +P+ D RGIV K +
Sbjct: 190 ICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLKQYE 249
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ + ++ + +AY G+A ++G+Y+ A + +AI+L +F A+
Sbjct: 250 DAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAY 303
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSN 445
RG+ Q G+Y AI+ F++ ++ P +P+A RG ++ E AI+ F EAI+
Sbjct: 203 RGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLKQYEDAIASFNEAIRFK 262
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A+ LG+ +AI ++A+ +P+ + +RG+ K + + A+
Sbjct: 263 SDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKRGVAQSKLRQYEDAIAS 322
Query: 506 LSACVKLDKE 515
+ + L ++
Sbjct: 323 FDSGLTLKRD 332
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A+ L++RG F +F A+ + ++L ++ AY G+A +G+ + A +
Sbjct: 59 DEAEELYQRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASF 118
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI R+F +A+ + L ++ A+ + + + F AY+ RG++ LGQ
Sbjct: 119 NEAIHFKRDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQ 178
Query: 601 HKKAI 605
+ AI
Sbjct: 179 KEDAI 183
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+AQ N G+Y AI+ F++ ++ P + A RG A++ R+ E AI+ F +
Sbjct: 271 NRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKRGVAQSKLRQYEDAIASFDSGLTLK 330
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A + W RG A L + A+ P+ L+ERG FK A+ E+
Sbjct: 331 RDAWQDWGNRGDAAGMLHRRNSPYLPSAFAI-LNPD----LNERG-----FKGAMASYEE 380
Query: 506 -LSACVK-----------LDKEN-----------------KSAYTYLGLALSSIGEYKKA 536
L C K D N ++A+T+ LAL ++ E
Sbjct: 381 GLKYCPKDTHPEGWGMLHFDIANAYYNRSRKNPKTRYQDRQTAHTHYNLALETLTE-TAY 439
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQ 559
EAHLK ++ L W Q
Sbjct: 440 PEAHLKVLRRLIRLLLGWNQTEQ 462
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 382 DFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D RGI + K Y AI+ F++ ++ + A RG A+ + E AI+ F E
Sbjct: 232 DAYFHRGIVLCDHLKQYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNE 291
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
AI+ P A+ +RG A++ L + +AI L
Sbjct: 292 AIRLKPDFSYAYFKRGVAQSKLRQYEDAIASFDSGL 327
>gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 558
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ +RG N KY AI+ F++ +K +P E RG++ AI DF +AI
Sbjct: 85 YYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYIRGSSYYNLNIFNKAIIDFDKAI 144
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + RG A A LG +AI D +KA+E PN +D + RGI K++ A
Sbjct: 145 MITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYKEA 204
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + + + L+ ++ Y GLA ++ YK A KAI+L+ NF A+ + Y
Sbjct: 205 IVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFDKAIELNPNFSVAYNNRGITYA 264
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
L N ++A+ + + ++ S A++L+ + + + K
Sbjct: 265 YLKNYKEAIVNFDKAIDLNPSDSLAFNLKEITIEIFEKEK 304
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A + E AI D+ AI+ NP+ + RG+ L + +AI D +KA++ PN +
Sbjct: 60 AVDDDFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEY 119
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + FN A+ D + + +N+ Y G A +++G + KA KAI+
Sbjct: 120 FYIRGSSYYNLNIFNKAIIDFDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIE 179
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ NF +A+ + Y L N ++A+ + + ++ Y+ RGL + +K AI
Sbjct: 180 LNPNFSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAI 239
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ SRG A N G + AI+ F++ ++ +P + +A RG A+ + + AI +F +A
Sbjct: 152 DYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYKEAIVNFNKA 211
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NPS + RG A AI + KA+E PN + + RGI K++
Sbjct: 212 IDLNPSDEGYYYNRGLAYNNFNNYKMAIINFDKAIELNPNFSVAYNNRGITYAYLKNYKE 271
Query: 502 AVEDLSACVKLD 513
A+ + + L+
Sbjct: 272 AIVNFDKAIDLN 283
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 19/175 (10%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I ++++ I+ NP+ + RG A G + +++ +A++
Sbjct: 20 IEEYSKKIEKNPNDASNYYNRGNAYYNRGNTFISLEKFQEAVD----------------- 62
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
DF A+ED + ++L+ N S Y G ++ +YKKA KAI+L+ N E +
Sbjct: 63 --DDFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYF 120
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y +L KA+ + + I Y+ RG LG KAI D +
Sbjct: 121 YIRGSSYYNLNIFNKAIIDFDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFN 175
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 17/156 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
S Y LN +K I + D+ + + S +R + +L N++KAI + + +
Sbjct: 126 SYYNLNIFNKAIIDFDKAIMITSDNEDYYNSR--GSAYANLGNFNKAIADFNKAIELNPN 183
Query: 69 IQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
D NR Y+ L+ +K I + +KA+ L+P+ Y +G A++ + A+ ++
Sbjct: 184 FSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFD 243
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
K +EL + A +R +T Y
Sbjct: 244 KA--------------IELNPNFSVAYNNRGITYAY 265
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI +Y A IF ++LK DP EA +G A L AI F EAI+ +P
Sbjct: 138 KGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKAFEEAIKIDP 197
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EAW R A L EA++ L P+ DI + R + K +++ AV+
Sbjct: 198 SYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSF 257
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +LD ENK A+ GL L+ G++++A A K ++ D +F EA L
Sbjct: 258 ARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGR 317
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
E+AL L++ L + + +GL+L G+ + AI + +R + P N T W
Sbjct: 318 FEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAAR-LNPD---NETCW 373
Query: 627 RNLCFNAWPFIR 638
N+ F + R
Sbjct: 374 MNMGFALYSLER 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D SR +A + YA A+ F ++ + DP +A + +G A + E A++ +
Sbjct: 235 DIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKL 294
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P EA K RG A LG EA+ L K+LE EP + ++ ++G++
Sbjct: 295 LEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEP 354
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ +L+ +N++ + +G AL S+ Y++A EA + ++L+ W
Sbjct: 355 AIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVL 414
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L + +ALE ++ + + F A+ RGLLL + +KA
Sbjct: 415 GKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKA 457
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G A + +Y A+ F + L+ +P +G + A+ F EAI+
Sbjct: 374 MNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKL 433
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AWK RG A E +A + ++ L+ P D L+ RGI K A+E
Sbjct: 434 RPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALE 493
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L V L + LG+AL+ +GEY+KA E K + LE + ++
Sbjct: 494 YLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEV 553
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N E AL+ +++L +A++ +GL L L ++A+K
Sbjct: 554 GNYETALQAFERILTEKPASREAWYRKGLALLKLENFEEAVK 595
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPM-----YPEALIGRGTARAFQRELEAAISDFTEAI 442
G++Q+ GKY A F+++L+++PM Y L+ RG + E A+ F A+
Sbjct: 1288 GLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQN-----EDAVEAFNRAL 1342
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P A +++G A +L EA S LE P +AD+L+ R + +FK +F A
Sbjct: 1343 EIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDA 1402
Query: 503 VEDLSACVKLDKENKSAYT----YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+DL V L + YT LG+A + +Y++A +A ++ + EA ++
Sbjct: 1403 AKDLEK-VLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMA 1461
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L E+A +Q+L ++ + GL L L K+A+K
Sbjct: 1462 LVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALK 1509
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 2/256 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
R+++ + D L +G+ GK+ A++ +++L+ DP + EA RGT A
Sbjct: 257 FARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLG 316
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A+ ++++ P W ++G G+ AI A P++
Sbjct: 317 RFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNM 376
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + + A+E ++L+ ++ + G+ L +G+ +A EA +AI+L +
Sbjct: 377 GFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPD 436
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F +AW + EKA E +VL I+ + + RG+ L LG+ + A++ L
Sbjct: 437 FEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLE 496
Query: 610 S--GSRTMMPHLIWNL 623
R P L ++L
Sbjct: 497 KVVSLRPDYPDLSYSL 512
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP-------------------------------MY 414
++G+ KY SA+ FD + +E+P Y
Sbjct: 69 AKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEALEDFLKKY 128
Query: 415 P---EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P AL +G + E A F++ ++ +P EAW R+G A L EAI+
Sbjct: 129 PANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKA 188
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+A++ +P+ + + R K + + A+E + +++ + K + LAL +
Sbjct: 189 FEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQ 248
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A ++ + +LD +AW E+AL L+++L D F++A LR
Sbjct: 249 NYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLR 308
Query: 592 GLLLHGLGQHKKAIKDL 608
G +L GLG+ ++A+ L
Sbjct: 309 GTVLAGLGRFEEALGPL 325
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE---------DPMYPEA-LIGRGTARAFQRELEA 433
+L GI G+Y +A+ +F+ I ++ DP P + L +G Q E
Sbjct: 754 KLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEK 813
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA-----DILHE 488
A+ F +P+ E W G + + LG EA + KALE NSA DI ++
Sbjct: 814 AVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKALEI--NSALRDTHDICYQ 871
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL--DKENKSAYTYL------GLALSSIGEYKKAEEAH 540
GI NF+ F A++ K D+E + TY L+L +G YK+AE
Sbjct: 872 LGISNFELGKFEEALKAFEKAFKTTPDREQITETTYTDLIYMKSLSLLRLGRYKEAEVGF 931
Query: 541 LKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ I D + EA HL+ F Q+ + E+ALE ++VL +G+ L L
Sbjct: 932 KEVIFRDSDNAEALAHLSTACFKQE--HYEEALEIFEKVLSQTPERKTVLFRKGVALKAL 989
Query: 599 GQ 600
G+
Sbjct: 990 GK 991
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D S G+A G+Y A+ F+++ E+P E RG E A+ F
Sbjct: 507 DLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERI 566
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ P++ EAW R+G A L EA++ + + D +G K K+ +
Sbjct: 567 LTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECAS 626
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++ ++ +A+ Y G+ L ++ ++A +A A +L+ A+ + +
Sbjct: 627 ALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCL 686
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ E A E + VL D A R + L L ++K+A+ LS+
Sbjct: 687 FETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALST 735
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ FD +L+ P + R A + A+ F + +P +AW ++G
Sbjct: 216 YEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQG 275
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A G+ EA+ L K LE++P+ + RG V F A+ L ++ + EN
Sbjct: 276 LLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPEN 335
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + GL L G+ + A +A A +L+ + W ++ L E+ALE ++
Sbjct: 336 YNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKE 395
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L ++ ++ +G++L LG+ +A++
Sbjct: 396 GLRLNPYLETGWNRKGIVLGKLGKTGEALE 425
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ ++ GK AI F+ + +P + G A E A+ F E ++
Sbjct: 340 LQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRL 399
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP W R+G LG++ EA++ +A++ P+ D RG++ F ++ A E
Sbjct: 400 NPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEE 459
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K++ E+ + G++L +G + A E K + L ++ + L +L
Sbjct: 460 AFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTEL 519
Query: 565 ANSEKALECLQQV 577
EKALE +++
Sbjct: 520 GEYEKALETFEKL 532
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ +P EA +G A + ++A+ F + NP A +++
Sbjct: 45 RYEEALENFERALEINPKDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQK 104
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A +G+ A++ L L+ P + L+ +GI+ + + A + S +KLD E
Sbjct: 105 CLLLAKIGKKDLALEALEDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPE 164
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N+ A+ G AL + +A +A +AI++D ++ EAW L E+ALE
Sbjct: 165 NREAWFRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFD 224
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L I ++ R L L L + +A++ +
Sbjct: 225 SMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFA 258
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + ++I F++ L+ P Y A GT E A+ +F A++ NP
Sbjct: 2 RGLAFAEIDRTEASILCFEKALELMPEYAAAWCAMGTVAGKAERYEEALENFERALEINP 61
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA +G A L + A++ P + + L ++ ++ K + A+E L
Sbjct: 62 KDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEAL 121
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K N++A + G+ LS + Y++AE+ K ++LD EAW L
Sbjct: 122 EDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLR 181
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL--IW 621
+A++ ++ + ID + +A++ R L L +++A++ S R + P + IW
Sbjct: 182 LNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLR-IYPDVKDIW 237
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RGI+ + G+ +A+ ++++ P YP+ G A E E A+ F +
Sbjct: 472 IDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEK 531
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
NP E RRG+ +G A+Q + L +P S + + +G+ K ++F
Sbjct: 532 LASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENFE 591
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV+ A D + + A G A + E A E + ++ + AW +
Sbjct: 592 EAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGMI 651
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L E+A + + ++ A+ R L GQ++ A +
Sbjct: 652 LYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFE 697
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 17/276 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+++ ++ + RG + G Y +A+ F++IL E P EA +G A
Sbjct: 531 KLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENF 590
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F + +A +G A+ L E A++ + LE +P+S + RG+
Sbjct: 591 EEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGM 650
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A + + +L+ +A+ Y L G+Y+ A EA ++ D L
Sbjct: 651 ILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENL 710
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDK-------RFSKAYHLRGLLLHGLGQHKKA 604
A +L +++A++ L +L D R +A G+ LGQ++ A
Sbjct: 711 SALEKRAICLFELKKNKEAVDALSTLLESDPERKDTKLRLEEAKLRLGIEYFELGQYENA 770
Query: 605 IKDLSSG---------SRTMMPHLIWNLTRWRNLCF 631
+ +L G +T P ++ W+ L F
Sbjct: 771 L-ELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLVF 805
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ N +Y A F+Q+L+ P PE+L G L+ A+ F +A NP
Sbjct: 1461 ALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPK 1520
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA L + E++ + LE P++ D+L+ +G++ + A+
Sbjct: 1521 NEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFD 1580
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K D EN A +G+ Y+ A A +A+ ++ ++ +L +
Sbjct: 1581 GVLKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGISLAKIGEY 1640
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+AL+ +++L I+ + ++ + RG++L L + +AI+
Sbjct: 1641 EEALKAFEKLLRINPQDVQSMNYRGVILGKLERFGEAIR 1679
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ IF+++L + P L +G A +++ ++ F ++ P A ++RG
Sbjct: 958 YEEALEIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRG 1017
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A LG EA + +ALE+ PN + + +G+ F+ +F A+E ++L +
Sbjct: 1018 YALFELGRYGEAAEAFKEALEYCPNKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQK 1077
Query: 517 KSAYTYLGLALSSIGEYKKA 536
Y GL+ G+Y A
Sbjct: 1078 PDIPYYTGLSCFETGDYAGA 1097
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V +++ I D R + +G+A ++ +Y A F +L+E P + L R A
Sbjct: 1334 AVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVAS 1393
Query: 426 AFQRELEAAISDFTEAI---QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
E A D + + +P EA G A L + A+Q L LE+EP
Sbjct: 1394 FKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEH 1453
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ L+ +V F +++ A ++ E+ + YLGL L + K+A +A K
Sbjct: 1454 EEALYNMALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEK 1513
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A + EA + L ++++L ++L I + +G++ L Q++
Sbjct: 1514 AALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYR 1573
Query: 603 KAIK 606
+A++
Sbjct: 1574 EALR 1577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ ++++ S S + RGIA + G+ A IF +++ P + +A G+G Q
Sbjct: 1195 LEKLAREGSASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQE 1254
Query: 430 ELEAAISDFTEAIQ-------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
E A+ +A+ P +A + G ++ G+ +A K LE P +
Sbjct: 1255 HYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMA 1314
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
ADI + G+V AVE + +++ + ++A GLAL S+ Y++A +A
Sbjct: 1315 ADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAF 1372
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI + ++D +G+ +Y A+ FD +LK DP +A+ G Q+
Sbjct: 1547 RILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKLY 1606
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A F EA+ NP ++ + G + A +GE EA++ K L P ++ RG+
Sbjct: 1607 ETAARAFKEALSINPWHEQSLRYLGISLAKIGEYEEALKAFEKLLRINPQDVQSMNYRGV 1666
Query: 492 VNFKFKDFNAAV 503
+ K + F A+
Sbjct: 1667 ILGKLERFGEAI 1678
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+++ D + ++ + G+Y A F +++ D EAL TA Q E A+
Sbjct: 903 TETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEAL 962
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
F + + P R+G A ALG+ +++ L+ +P+ + L +RG F+
Sbjct: 963 EIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFE 1022
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQL 546
+ A E ++ NK+ YL GLA IG + +A E KA++L
Sbjct: 1023 LGRYGEAAEAFKEALEYCP-NKTYMQYLKGLAFFRIGNFTEALEGFGKALEL 1073
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + A F ++LK +P ++L RG + E A+ + +
Sbjct: 443 NRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLR 502
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + G A LGE +A++ K P +I RG + + ++ A++
Sbjct: 503 PDYPDLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQA 562
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-DL 564
+ ++ A+ GLAL + +++A +A D ++ +A G L F Q L
Sbjct: 563 FERILTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDA-GVLKGFAQMKL 621
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
ALE ++VL A++ RG++L+ L + ++A K S SR + P L +
Sbjct: 622 KECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASR-LNPGL-YTAF 679
Query: 625 RWRNLCF 631
+R C
Sbjct: 680 EYRAKCL 686
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 46/247 (18%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y +A F+ +L++DP AL R ++ + A+ + ++S+P + R
Sbjct: 690 GQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERKDTKLR 749
Query: 455 RGQARAALGESVEAIQDLSKALE-FE------------------PNSADILHERGIVNFK 495
+A+ LG + ALE FE PNS +L+ +G+V +
Sbjct: 750 LEEAKLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNS--VLYWKGLVFIR 807
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-------- 547
+ + AVE D + + GL+ S +G Y++A EA KA++++
Sbjct: 808 QEAYEKAVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKALEINSALRDTHD 867
Query: 548 -------RNFLEAWGHLTQFYQDLANSEKALECL---QQVLYIDKRFSKAYHLRGLLLHG 597
NF L +F + L EKA + +Q+ + ++ +++ L L
Sbjct: 868 ICYQLGISNF-----ELGKFEEALKAFEKAFKTTPDREQI--TETTYTDLIYMKSLSLLR 920
Query: 598 LGQHKKA 604
LG++K+A
Sbjct: 921 LGRYKEA 927
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V FR +G+A GK ++ IFD +LK P AL RG A A F
Sbjct: 977 TVLFR--KGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFELGRYGEAAEAFK 1034
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EA++ P+ +G A +G EA++ KALE DI + G+ F+ D+
Sbjct: 1035 EALEYCPNKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQKPDIPYYTGLSCFETGDY 1094
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A++ + ++ LAL +G ++A
Sbjct: 1095 AGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEA 1131
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RLN+ K +E +++D A R L L + +A+ DS+L +++D
Sbjct: 181 RLNEAIKAF---EEAIKIDPSYFEAWNCRC--FALMKLEVYEEALEAFDSMLRIYPDVKD 235
Query: 72 I-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
I +RA +L+ + ++ + +LDP A++ +G + G+ EEAL+ EK
Sbjct: 236 IWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLL 295
Query: 131 EH 132
E+
Sbjct: 296 EY 297
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 7/163 (4%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG EA + S +E P+ + +G+V F + + A++ L V +
Sbjct: 1212 RGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQEHYEEALKALKQAVPDGE 1271
Query: 515 ENK-------SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
E+K A T +GL+ G+Y+ A + K ++ + + W + L +
Sbjct: 1272 ESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQN 1331
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E A+E + L I A +GL L L ++++A SS
Sbjct: 1332 EDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSS 1374
>gi|440684825|ref|YP_007159620.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681944|gb|AFZ60710.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 279
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 364 RNKKFCVT--------RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
RN+ VT R++ + S + +F + +G Q +G +AI+ + + + + Y
Sbjct: 35 RNQDVLVTEVGVSPPNRLTANTSKAGEFYI-QGQNQHAKGNSEAAIAAYSKSISLNSQYA 93
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A RG A E AI+D+ +A++ NP+ GE + RG ARA+LG+ AI D ++A
Sbjct: 94 PAFKSRGLAYFDAGNKEGAIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEA 153
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ PN A+ + RG D N AV D + +++D+ AY G + G+ +K
Sbjct: 154 IRLAPNYAEAFNNRGNARSAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQK 213
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
A + +AI+L+ NF A+ + + + AL+ LQ+ I DK +K
Sbjct: 214 AIADYNQAIRLNPNFGPAFNNRGNALAAIGDKRGALQDLQRAAAIFDKEGNK 265
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAI+ ++++I N A+K RG A G AI D ++AL PN + + RG
Sbjct: 76 EAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNKEGAIADYNQALRLNPNDGETYNNRGN 135
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D AA+ D + ++L A+ G A S+ G+ A + +AI++D+N+
Sbjct: 136 ARASLGDQQAAIADYNEAIRLAPNYAEAFNNRGNARSAQGDKNGAVADYTEAIRIDQNYS 195
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y + +KA+ Q + ++ F A++ RG L +G + A++DL
Sbjct: 196 VAYNNRGNTYFAQGDQQKAIADYNQAIRLNPNFGPAFNNRGNALAAIGDKRGALQDL 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGE + + GQ + A G S AI SK++ A RG+ F + A+ D +
Sbjct: 59 AGEFYIQ-GQNQHAKGNSEAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNKEGAIADYN 117
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + Y G A +S+G+ + A + +AI+L N+ EA+ + +
Sbjct: 118 QALRLNPNDGETYNNRGNARASLGDQQAAIADYNEAIRLAPNYAEAFNNRGNARSAQGDK 177
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
A+ + + ID+ +S AY+ RG G +KAI D + R + P+
Sbjct: 178 NGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQKAIADYNQAIR-LNPNF 228
>gi|434405193|ref|YP_007148078.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
gi|428259448|gb|AFZ25398.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
Length = 576
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 315 SASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS 374
ASL +++ + SS+ DN +D+ + KW + + E K + I+
Sbjct: 263 GASLGNADLRGANLDASSLPDNIRADAGDYS-----KWGDNQYSKREYKSAIAYYNQAIA 317
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
+ + + SRG+A Y +A++ F++ ++ DP Y +A RG R Q++ + A
Sbjct: 318 LNPQDTQGY-TSRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSRGLTRIEQQDYQNA 376
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ DF +AI+ NP+ EA+ R R + I D S A+ + RG+ F
Sbjct: 377 LVDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSKFGAAYNNRGLARF 436
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A++D + + AY GLA +IGEYK A + +AI +D+N+++A+
Sbjct: 437 AQQDYQGAIKDYDSAIGNSSNWAWAYFNRGLAKYTIGEYKDATGDYDRAIDIDQNYVDAY 496
Query: 555 GH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
L +F + E A++ +V+ D + +AY +G
Sbjct: 497 YQRSLARFAR--KKYEDAIKDCDRVIQKDPNYGEAYENQG 534
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 14/178 (7%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E AI ++A+ P RG+ + KD+ AA+ D + +++D AY
Sbjct: 304 EYKSAIAYYNQAIALNPQDTQGYTSRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSR 363
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GL +Y+ A +AI+L+ N+ EA+ + + + + I+ +
Sbjct: 364 GLTRIEQQDYQNALVDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSK 423
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWPFIRRRL 641
F AY+ RGL ++ AIKD S I N + W AW + R L
Sbjct: 424 FGAAYNNRGLARFAQQDYQGAIKDYDSA--------IGNSSNW------AWAYFNRGL 467
>gi|338738138|ref|YP_004675100.1| hypothetical protein HYPMC_1295 [Hyphomicrobium sp. MC1]
gi|337758701|emb|CCB64526.1| TPR repeat-containing protein [Hyphomicrobium sp. MC1]
Length = 557
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 15/320 (4%)
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
D N+R N + +L A+L D N E + + ++ N +R L
Sbjct: 59 DTGLPNDRRATILNDRAVANVRLGETKAALEDYNRAVELFPEYPVAYN-------NRGNL 111
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
LKE + R + + S + + +RG A++ G+ A+A++ F + +
Sbjct: 112 LLALGQLKEAMKDFDRA-------LLLAPSFAAAYS-NRGNARMKLGQSAAALADFTKAI 163
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ P L GRG A + AAI DF+ A+ ++ A++ R +AR A+G+ +A
Sbjct: 164 ELMPASAPPLSGRGLAYLSVGKPHAAIRDFSRAVSADARFAAAYRNRAEARMAVGQRDDA 223
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I+DLS+A+ F+PN+ ++ RG + +A++D S ++LD ++ + Y GLA
Sbjct: 224 IEDLSRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFSRAIELDPKSSAGYEGRGLANG 283
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ A +AI+LD A+ Y+ + + ++ + +D +A
Sbjct: 284 VAEAFDDANSDLNRAIELDPRSPVAFAFRAYIYKQNGQPDIGAKDVETAIKLDTNSPEAL 343
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
RG + GQ AI DL
Sbjct: 344 WARGEIEEANGQADTAITDL 363
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E +AA+ D+ A++ P A+ RG ALG+ EA++D +AL P+ A R
Sbjct: 83 ETKAALEDYNRAVELFPEYPVAYNNRGNLLLALGQLKEAMKDFDRALLLAPSFAAAYSNR 142
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G K AA+ D + ++L + + GLA S+G+ A +A+ D
Sbjct: 143 GNARMKLGQSAAALADFTKAIELMPASAPPLSGRGLAYLSVGKPHAAIRDFSRAVSADAR 202
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F A+ + + + + A+E L + + D + Y +RG G AIKD S
Sbjct: 203 FAAAYRNRAEARMAVGQRDDAIEDLSRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFS 262
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I+ D + RG A + G ASAI F + ++ DP GRG A
Sbjct: 228 SRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFSRAIELDPKSSAGYEGRGLANGVAEA 287
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A SD AI+ +P + A+ R G+ +D+ A++ + NS + L RG
Sbjct: 288 FDDANSDLNRAIELDPRSPVAFAFRAYIYKQNGQPDIGAKDVETAIKLDTNSPEALWARG 347
Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
+ + A+ DL ++L
Sbjct: 348 EIEEANGQADTAITDLRHALQL 369
>gi|189184045|ref|YP_001937830.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
Ikeda]
gi|189184392|ref|YP_001938177.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
Ikeda]
gi|189180816|dbj|BAG40596.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
Ikeda]
gi|189181163|dbj|BAG40943.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
Ikeda]
Length = 381
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI + D +K P Y A +G A E A+ +F AI+ N S EA+
Sbjct: 124 GKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNSSYPEAYYN 183
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EAI++ A+ + PN ++ H +G+ F A+E +K D
Sbjct: 184 KGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDP 243
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY G LS + Y +A E+ AI+ + N EA+ ++ L +KA+E
Sbjct: 244 NDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIENY 303
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ F++ Y +G+ L LGQ+ KA ++ + MP+ I
Sbjct: 304 DIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIK-YMPNFI 348
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N G+Y A+ FD ++ + YPEA +G A + ++ AI ++ AI+
Sbjct: 149 NKGAALNNLGRYEEAVENFDVAIRYNSSYPEAYYNKGIALMYLGYIQEAIENYDTAIRYR 208
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ +G A LG+ +AI+ A++++PN A +G V K ++ A+E
Sbjct: 209 PNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIES 268
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +K + AY G+ +GE +KA E + AI+ NF E +
Sbjct: 269 CNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIENYDIAIKYKPNFAENY 317
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + G AI +D ++ P Y EA +G AF + + AI F AI+ +
Sbjct: 183 NKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYD 242
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G + L EAI+ + A+++ PN A+ + RG++ K + A+E+
Sbjct: 243 PNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIEN 302
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K Y G++L S+G+Y KA+E AI+ NF+ + + +L
Sbjct: 303 YDIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIKYMPNFIAEYEATIKRLTELE 362
Query: 566 NSEKALECLQQVLYIDKRFS 585
N A E +Q L I K++S
Sbjct: 363 NFTIAKE-FEQKLQILKKYS 381
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY AI FD +K DP Y A +G A A + LE A+ ++ AI+ P EA+
Sbjct: 57 KYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALE-AVENYDLAIKHKPHFAEAYNN 115
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + LG++ EAI A++++PN + +G + AVE+ ++ +
Sbjct: 116 KAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNS 175
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+AL +G ++A E + AI+ N+ EA+ + L +KA+E
Sbjct: 176 SYPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHF 235
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ D + AY +G +L L ++ +AI+
Sbjct: 236 DLAIKYDPNDATAYCNKGYVLSMLKRYSEAIE 267
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ K ++ A+E+ +K D SAY G+AL+ +G+ +A E + AI+ +F EA
Sbjct: 53 LRLKKYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALEAVENYDLAIKHKPHFAEA 112
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + Y+ L +E+A+ + + AY+ +G L+ LG++++A+++ R
Sbjct: 113 YNNKAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIR 172
Query: 614 --TMMPHLIWN 622
+ P +N
Sbjct: 173 YNSSYPEAYYN 183
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
RL K H+ I D ++ D ASA ++ I LA L ++ N+ AI+ A++
Sbjct: 54 RLKKYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALEAVENYDLAIK-HKPHFAEA 112
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y +L ++ I CD A++ P + AY KG A + LGR EEA+ +
Sbjct: 113 YN-----NKAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENF 167
Query: 127 E 127
+
Sbjct: 168 D 168
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + KAI D LA Y+ D CN+ + S L+ + I C+ A++ +P
Sbjct: 222 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 279
Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
+AY +G F LG +++A+ ++
Sbjct: 280 AEAYYRRGMIFEKLGEQQKAIENYD 304
>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
Length = 1212
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 118/223 (52%), Gaps = 4/223 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A N KY AI F ++++ +P Y EA I +G + ++ E ++ + EA+
Sbjct: 817 FYRGVAFFNIQKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSK 876
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ +G L + E+I + L A+ +++GI + K F A+E
Sbjct: 877 NPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIE 936
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
++++++ AY G+AL+ I EY+KA + + KAI++++N+ EA+ + + F+
Sbjct: 937 SFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFF- 995
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L A++C Q+ + I+ FS+AY G L+ +++ AI
Sbjct: 996 -LNEFTDAIKCYQKAIKINSEFSEAYSNIGTALNFQEKYQDAI 1037
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 389 IAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
IA N+G +Y +I F+QIL ++ + EA +G A Q++ + AI F +A
Sbjct: 882 IAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIESFEKA 941
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ N +A+ +G A + E +A++ KA++ N A+ + +GI+ F +F
Sbjct: 942 IEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFFLNEFTD 1001
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ +K++ E AY+ +G AL+ +Y+ A LKAI ++ + A+ + Y
Sbjct: 1002 AIKCYQKAIKINSEFSEAYSNIGTALNFQEKYQDAIPCFLKAISINNQYSLAYQNTGVSY 1061
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L+ KA C ++ ID+ +Y+ + + L +K++ S+
Sbjct: 1062 FKLSQFLKAAVCFEKAFQIDQN---SYNSLFFMNYSLNLYKQSYTSTST 1107
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+ + ++ + Y AIS FDQ LK D EA +G ++ E A F I
Sbjct: 649 VSKALIEIQQ--YEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINM 706
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ +A+ +G L + ++++ L+KA+ N + + V + K + A+E
Sbjct: 707 EPNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIE 766
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+KLD +N + LG++ ++ ++++A + IQ +++FLEA+ + + ++
Sbjct: 767 YYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNI 826
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRG 592
++A++ Q+V+ I+ + +AY +G
Sbjct: 827 QKYDEAIDSFQKVIEINPDYLEAYIYKG 854
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y AI +++ ++ +P Y A +G +FQ+ +EA I F +AI+ NP EA+ R
Sbjct: 183 YKEAIQYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQ-FEKAIKINPHFFEAYNNR 241
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + EAI ++ PN + +G V + A+ + C+ L+
Sbjct: 242 GNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPN 301
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ SAY G L+ + +Y+ A KAI L+ F++A+ + ++ + AL L+
Sbjct: 302 DTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILE 361
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+V+ +DK+ K +G LL L Q++ +I
Sbjct: 362 KVIEVDKQNLKYLIKQGQLLMKLKQYQNSI 391
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G +N KY A FDQ + D E +G + + + AI + +AI+ N
Sbjct: 138 NKGNIFMNLRKYEEANKCFDQAILLDKQDFECYYNKGNSLTKLKMYKEAIQYYEKAIEIN 197
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G + ++VEA KA++ P+ + + RG + F K + A++
Sbjct: 198 PNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDS 257
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
C++++ +AY G + +Y+KA + K I L+ N A+ + L
Sbjct: 258 YQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLK 317
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ L + + ++ F KAY ++ +L ++ A+
Sbjct: 318 KYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDAL 357
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G ++ K A F++ +K +P + EA RG +Q++ + AI + IQ
Sbjct: 205 FNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDSYQFCIQI 264
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ +G L + +AI +K + PN +++G + K + A+
Sbjct: 265 NPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLKKYEDAIL 324
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + L+ AY L + +Y A K I++D+ L+ Q L
Sbjct: 325 YLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQGQLLMKL 384
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +++C +++L I + G + L +++KA+
Sbjct: 385 KQYQNSIDCFEKILQIYPLQENIFQYIGKNYYYLEKYEKAL 425
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 397 YASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y +I +++I+++ Y + I A ++ E AIS F +A++ + EA +
Sbjct: 624 YQESIKCYEEIIQKRNSYLLQTFINVSKALIEIQQYEKAISYFDQALKIDQYNIEAQFNK 683
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + +A Q + EPN+ +GI + ++E L+ + L++
Sbjct: 684 GICLNLIKKFEKASQCFQNIINMEPNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNEN 743
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A L+ I +Y++A E + +A++LD E + L + +L ++A+
Sbjct: 744 DFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFD 803
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + ++ F +AY RG+ + ++ +AI
Sbjct: 804 ETIQFNQSFLEAYFYRGVAFFNIQKYDEAI 833
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G GK+ AIS +DQ ++ + ++ + +G A + + AI + + I+
Sbjct: 475 LQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEI 534
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +++ G + L + +A + KAL + L +G + + + F A+
Sbjct: 535 NPQDFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAIN 594
Query: 505 DLSACVKLDKEN-------------------------------KSAY---TYLGL--ALS 528
+++ N +++Y T++ + AL
Sbjct: 595 CYDQILEISNFNVASLYNKGNILFFYLQNYQESIKCYEEIIQKRNSYLLQTFINVSKALI 654
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
I +Y+KA +A+++D+ +EA + + EKA +C Q ++ ++ KAY
Sbjct: 655 EIQQYEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAY 714
Query: 589 HLRGLLLHGLGQHKKAIKDLSSG 611
+G+ L L Q++++++ L+
Sbjct: 715 LNQGICLKNLFQYQQSLECLNKA 737
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ F++I+ IG + + E AI + +A N + + ++
Sbjct: 420 KYEKALFYFEKIVDNKDFDIFFFIGNILKKL--EKFEKAIEYYEKAQLINQNDYYIYLQK 477
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +EAI +A++ D +G + ++F+ A++ ++++ +
Sbjct: 478 GDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQ 537
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ +Y +G + ++ +YK A + KA+ +++ ++E + ++ + ++A+ C
Sbjct: 538 DFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAINCYD 597
Query: 576 QVLYIDKRFSKA--YHLRGLLLHGLGQHKKAIK 606
Q+L I F+ A Y+ +L L ++++IK
Sbjct: 598 QILEIS-NFNVASLYNKGNILFFYLQNYQESIK 629
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 35/259 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A +G + S I FD+ ++ +P A RG + E+E AISD+TEAI+
Sbjct: 65 FNRGMAYTQKGDFTSGIHDFDETIRLNPE-GRAYDNRGNLYDQKGEVEKAISDYTEAIKL 123
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ +R G+S +AI D ++A++ P A+ RG +D++ A+
Sbjct: 124 NPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIA 183
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
D VKL+ + SAY GLA + G+ KA + I+L+ A+G
Sbjct: 184 DYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMK 243
Query: 557 ------LTQF--------------------YQDLANSEKALECLQQVLYIDKRFSKAYHL 590
++ F YQ+ ++AL + + ++ + + A+H
Sbjct: 244 GDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHN 303
Query: 591 RGLLLHGLGQHKKAIKDLS 609
RGL+ G G +KAI++ S
Sbjct: 304 RGLIYVGKGDWEKAIENFS 322
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AIS + Q ++ +P RG A A +R+ + AI+D+ + ++ NP A+
Sbjct: 141 KGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYN 200
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A A G+ +AI+DLS+ ++ P A RG+ D++ AV D S +KL
Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK 260
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ Y A + G+ +A +AI+L+ A+ + Y + EKA+E
Sbjct: 261 PTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIEN 320
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + ++ + + A+ RG + G+++K I D++ R
Sbjct: 321 FSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALR 360
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A +G AI +++K +P A RG + A + + + A+SDF+E I+
Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R A G+ EA+ D S+A++ A H RG++ D+ A+E+
Sbjct: 261 PTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIEN 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
S ++L+ ++ A+ G A GEY+K + +A++L+ E++ +L F
Sbjct: 321 FSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWF 375
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A + + AI+ +DQ++K +P A RG A A + +++ AI D +E I+ N
Sbjct: 167 SRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLN 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + A G+ +A+ D S+ ++ +P + R + A+ D
Sbjct: 227 PKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALAD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +KL+ ++ A+ GL G+++KA E K+IQL+ +A+ Y
Sbjct: 287 FSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYH 589
+K ++ + + L ++ + +++Y+
Sbjct: 347 EYQKGIDDINEALRLNPKDAESYN 370
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ V +G + AI F + ++ +P +A RG A + E + I D EA++ N
Sbjct: 303 NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLN 362
Query: 446 PSAGE-----AWKRRGQARAALGESVEAIQDLSKALEF 478
P E AW R A++ + EA++ KA E
Sbjct: 363 PKDAESYNNLAWFRATCPDASMRKGKEAVEAGKKACEL 400
>gi|449125236|ref|ZP_21761538.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
gi|448939205|gb|EMB20122.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
Length = 329
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ +P +A+ +G
Sbjct: 54 AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + K ++ A+++++A +KL+ + S
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL S+ +Y +A + + K+IQ+D N+++++ L Y L +AL+ L + +
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIA 233
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
I+ + Y RG +L L ++++AIKD
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKD 260
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S E + G + AI +KA+E +P + RG + + + A+
Sbjct: 31 NYSQAEYFNMAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L + AY + GL + G Y KA E AI L+ E + ++ Y L
Sbjct: 91 DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+KAL+ + + ++ + Y +GLL + + ++ +AIK+
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKE 193
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI ++ ++IQ +P+ +++K L + +EA+ L++A+ P+ + RG +
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A++D + +KL+ N +Y GL + YKKA E AI+ N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304
>gi|307111954|gb|EFN60188.1| hypothetical protein CHLNCDRAFT_133703 [Chlorella variabilis]
Length = 1021
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ + VN+G A S+ D +L P A RGTARA EL A+ DF+ AIQ
Sbjct: 266 LALAVQLVNDGSCREAASLLDLLLYHHPGNVGAFAARGTARALLGELSGAVEDFSAAIQL 325
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---ADILHERGIVNFKFKDFNA 501
PS + +KRR QA AALGE A D+ A+ P++ A+ + G ++ K KD+
Sbjct: 326 EPSFADFYKRRSQALAALGEDERAAADVQSAISLSPDAAAKAECHEDLGRLHQKAKDYRR 385
Query: 502 AVEDLSACVKLDKENK--SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ++ L T LGL I Y+ A++LD + W +L
Sbjct: 386 AEQEFRVAASLAPAGPRLELLTALGLCQEGIATYE-------AALKLDATSKDLWLNLGM 438
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSG 611
++L E+A + L++ + + A H LL GLG H A+++L+ G
Sbjct: 439 ACKELCWVERAEQALRKAARLAGKGGTAVHAYRLLAQMKQGLGDHLGAVRELNRG 493
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L + + W+ IR LD+ L ++ + + NR FC QL L++ ++D + L P
Sbjct: 8 LLASKQWTGLIRSLDAALQEAVDCDRQRLLLNRGFCLQQLGLYRKALKDYEAVLAGQPGQ 67
Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADL 140
A + K AL + EEA E+ L ++ADL
Sbjct: 68 AAALLSKAKVHVALKQLEEAQECLEE-----LGKAADL 100
>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
Length = 461
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG QR LE A++D+ AI+ P +AW RG G++ +AI+DLS+AL +P
Sbjct: 147 RGVVYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLDP 206
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A RG K + +V D ++LD + Y GL+L+++G+Y +A +
Sbjct: 207 NRARSYTNRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADY 266
Query: 541 LKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L NF G Q +L AL + L +D F++ Y+ R +L +
Sbjct: 267 DQALRLAPKPNFFTNRGDSYQLKGELG---AALGDYESALKLDPNFAQTYNNRAVLYKKM 323
Query: 599 GQHKKAIKDL-------------SSGSRTMMPHL 619
G+ +KA+ D ++G RTM+ +
Sbjct: 324 GERRKALADYETALKLDPGNDNAAAGRRTMIAEI 357
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 402 SIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-R 459
+I DQ AL+ R A A L A+ D AI + +AW+ RG R
Sbjct: 58 AIVDQTANPSSDRAAALLVRADASARISGGLTQALRDIDRAITLDGKNAKAWRLRGDLLR 117
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G+ A DLSKA+E + A+ RG+V + A+ D +KL + A
Sbjct: 118 EAGGDLGRAAADLSKAIELDAEDAEAYELRGVVYTNQRRLERALADYDRAIKLKPDYAQA 177
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++ G G+ +KA +A++LD N ++ + Y+ L +K++ + +
Sbjct: 178 WSDRGATYYLGGDNEKAIRDLSEALRLDPNRARSYTNRGAAYKKLGQLDKSVADDGEAIR 237
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR-TMMPHLIWN 622
+D + + Y RGL L +G++ +AI D R P+ N
Sbjct: 238 LDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLAPKPNFFTN 281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +++ + ++ DP PE RG + A + + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLA 273
Query: 446 PSA------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P G++++ +G+ AALG D AL+ +PN A + R ++ K +
Sbjct: 274 PKPNFFTNRGDSYQLKGELGAALG-------DYESALKLDPNFAQTYNNRAVLYKKMGER 326
Query: 500 NAAVEDLSACVKLDKENKSA 519
A+ D +KLD N +A
Sbjct: 327 RKALADYETALKLDPGNDNA 346
>gi|428297688|ref|YP_007135994.1| hypothetical protein Cal6303_0957 [Calothrix sp. PCC 6303]
gi|428234232|gb|AFZ00022.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 331
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISI 403
+ K D NE K F S++I +D + RG + G A++
Sbjct: 12 ALKPDDFLIKGNEKYEKKDFRGALADYSEAIKLDPNYANAYGNRGATRKELGDKQGALAD 71
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
++Q +K +P Y A RG R + + A++D+ +AI+ NP+ A+ RRG R LG
Sbjct: 72 YNQAIKINPNYANAYGNRGATRDELGDKQGALADYNQAIKINPNDAIAYNRRGYFRYELG 131
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL-------SACVKLDKEN 516
+ AI DL++A+ PN AD + RG V ++ D A++DL + +K++ +
Sbjct: 132 DKQGAIADLNQAIIINPNYADAYNSRGYVRYELGDKQGAIDDLNQALADYNQAIKINPND 191
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y+ G A +G+ + A + +AI+++ + +A + + + E A++ Q+
Sbjct: 192 AQVYSGRGYARYRLGDKQGAIDDLNQAIKINPKYRDAIIFIGLIKYEDGDRETAIKQWQE 251
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWPF 636
+ ID + ++ LH GQ ++A+ +++ + T+ + F F
Sbjct: 252 AITIDPKSAEPLLALSTALHKKGQRQQAV-NMAKQALTL------------DKSFADEAF 298
Query: 637 IRRRLLCTRLL 647
++++L RL+
Sbjct: 299 LKKKLWGVRLI 309
>gi|428210636|ref|YP_007083780.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
gi|427999017|gb|AFY79860.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
Length = 702
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +DQ L+ P EA RG A ++ EAA+ + ++++ W R
Sbjct: 451 RYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNR 510
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L ++ EA++ KA+ F+PN A+ + RG + D + A + VKL
Sbjct: 511 GNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAVKLQTN 570
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ LG AL + Y++A EA+ +AI L + AW + +L ++A+
Sbjct: 571 YQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKKIDYRAWYNRGNALYNLNRYQEAVSSYN 630
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ Y+ +++++ +G L LGQ+++AI
Sbjct: 631 EAAYVKPDHAESWYGKGNSLSTLGQYEEAI 660
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 108/208 (51%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+ +D+ ++ +P Y +A I RG + + AI+ F +AI+ P + EAW +G
Sbjct: 386 AAMDAYDRAIQLNPEYLDAWIRRGDVLNRLQRYDGAIASFEKAIELVPESAEAWNGKGNT 445
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+L EAI +ALEF+P S++ + RG + KD+ AA++ V+ +
Sbjct: 446 LLSLQRYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAV 505
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ G L + + K+A E++ KA++ N+ EAW L ++ +A + ++ +
Sbjct: 506 GWYNRGNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAV 565
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +A++ G LH L ++++AI+
Sbjct: 566 KLQTNYQEAWYSLGWALHQLRRYEQAIE 593
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ F++ ++ P EA G+G + E AI+ + +A++ P + EAW R
Sbjct: 417 RYDGAIASFEKAIELVPESAEAWNGKGNTLLSLQRYEEAIAAYDQALEFQPESSEAWYAR 476
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + A++ K++E++ + A + RG V + AVE V+
Sbjct: 477 GWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKAVRFQPN 536
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL + + +A +++ +A++L N+ EAW L L E+A+E
Sbjct: 537 YAEAWYSRGNALMQLNDASEAAKSYERAVKLQTNYQEAWYSLGWALHQLRRYEQAIEAYN 596
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
Q + + K +A++ RG L+ L ++++A+ + + H
Sbjct: 597 QAIDLKKIDYRAWYNRGNALYNLNRYQEAVSSYNEAAYVKPDH 639
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ + AI+ EAWK +G + L ++ A+ +A++ P D RG
Sbjct: 351 EEALKRYENAIEIKADYVEAWKEKGDTLSRLNQNEAAMDAYDRAIQLNPEYLDAWIRRGD 410
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + + ++ A+ ++L E+ A+ G L S+ Y++A A+ +A++
Sbjct: 411 VLNRLQRYDGAIASFEKAIELVPESAEAWNGKGNTLLSLQRYEEAIAAYDQALEFQPESS 470
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EAW + L + E AL+ + + ++ ++ RG +L L Q K+A++
Sbjct: 471 EAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKA 530
Query: 612 SR 613
R
Sbjct: 531 VR 532
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A Y +A+ +D+ ++ Y RG + + A+ + +A++
Sbjct: 475 ARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKAVRFQ 534
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L ++ EA + +A++ + N + + G + + + A+E
Sbjct: 535 PNYAEAWYSRGNALMQLNDASEAAKSYERAVKLQTNYQEAWYSLGWALHQLRRYEQAIEA 594
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + L K + A+ G AL ++ Y++A ++ +A + + E+W
Sbjct: 595 YNQAIDLKKIDYRAWYNRGNALYNLNRYQEAVSSYNEAAYVKPDHAESW 643
>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 323
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+++ + DF + RG+ ++ G + AI F+Q +K D A RG Q E + AI
Sbjct: 64 AQTTAEDF-VQRGVEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAI 122
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D AI+ P+ A+ RG AR +G+ AI D +KA++ PN A + RG + +
Sbjct: 123 TDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQ 182
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
++ A+ D + ++++ AY A G++K+A +AI ++ N+ + +
Sbjct: 183 QENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYS 242
Query: 556 -----HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
HL Q DL + AL L Q L I+ +++AY+ RGL L ++AI D
Sbjct: 243 NRGFVHLQQ--NDL---QTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADFQK 297
Query: 611 GS 612
+
Sbjct: 298 AA 299
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K +T ++++ I+ +F + RG A++ G AIS F + + +P A GRG
Sbjct: 119 KKAITDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGF 178
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A Q ++ AI+DF +A++ NP+ A+ R AR G+ EAI D ++A+ PN A
Sbjct: 179 AHLQQENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYA 238
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RG V+ + D A+ DL+ ++++ AY + GL + ++A KA
Sbjct: 239 QGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADFQKA 298
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
L R G +T YQ+ AL+ +QQ+
Sbjct: 299 ADLSRQ----QGDMT-IYQN------ALDQIQQI 321
>gi|145545470|ref|XP_001458419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426239|emb|CAK91022.1| unnamed protein product [Paramecium tetraurelia]
Length = 551
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 2/242 (0%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N + VT +K + + ++++N KY AI +D+ + +P Y +G A
Sbjct: 121 NPNYDVTWFNKGNQLLEQHYIGISLSKIN--KYYEAIECYDKAIFINPNYDLTWYLKGHA 178
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ AI +AI NP+ +AW +G A +L + EAI+ KA++ PN+
Sbjct: 179 LNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFG 238
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ + +GI A+E + + ++ A+ G AL+ + +Y++A E + KAI
Sbjct: 239 VWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAI 298
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ N+ AW ++ L + A+EC ++ + I+ + + GL L L ++++A
Sbjct: 299 FINPNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEA 358
Query: 605 IK 606
I+
Sbjct: 359 IE 360
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA N ++ A+ +++ + +P Y A +G A + + A+ + +AI N
Sbjct: 242 NKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFIN 301
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW G + L + +AI+ KA+ PN G+ + A+E
Sbjct: 302 PNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIEC 361
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ ++A+ G AL+ + +Y++A E + KAI ++ N+ AW + L
Sbjct: 362 YDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLN 421
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+EC +V+ I++ A++ +G L L Q++ AI+
Sbjct: 422 KYQEAIECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIE 462
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 374 SKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+ SI+ ++ ++ +G A + KY A+ + + + +P Y A G + +
Sbjct: 261 NKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKLNK 320
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI + +AI NP+ W G A + L + EAI+ KA+ PN +G
Sbjct: 321 YKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIECYDKAISINPNYEAAWINKG 380
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A+E + ++ ++A+ GLAL+ + +Y++A E + K I +++N
Sbjct: 381 HALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAIECYDKVISINQNS 440
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW + +L + A+EC + + I+ + A+ +GL+LH L ++K AI
Sbjct: 441 DAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLILHNLNKYKDAI 495
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI D+ + +P Y +A +G A + + AI + +AI+ NP+ W
Sbjct: 183 NRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFGVWNN 242
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A L + EA++ +KA+ PN + +G + AVE + ++
Sbjct: 243 KGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFINP 302
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ +G LS + +YK A E + KAI ++ N+ W H +L ++A+EC
Sbjct: 303 NYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIECY 362
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + I+ + A+ +G L+ L Q+++AI+
Sbjct: 363 DKAISINPNYEAAWINKGHALNKLNQYQEAIE 394
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY AI +D+ + +P Y A I +G A + + AI + +AI NP+ W
Sbjct: 37 NKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAISINPNYDVTWYL 96
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADIL-----------HERGIVNFKFKDFNAAV 503
+G A + L + +AI+ K++ PN D+ H GI K + A+
Sbjct: 97 KGHALSKLNQYQKAIECYDKSISINPNY-DVTWFNKGNQLLEQHYIGISLSKINKYYEAI 155
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E + ++ + G AL+ + Y++A E KAI ++ N+ +AW + +
Sbjct: 156 ECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKS 215
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L ++A+EC + + I+ ++ +G+ L L QH++A++
Sbjct: 216 LNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAME 258
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+ G++++N KY AI + + + +P Y G A + + + AI + +AI
Sbjct: 310 NIGDGLSKLN--KYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIECYDKAIS 367
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ AW +G A L + EAI+ KA+ N + +G+ K + A+
Sbjct: 368 INPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAI 427
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E + +++ + +A+ G ALS++ +Y+ A E + KAI ++ AW + +
Sbjct: 428 ECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLILHN 487
Query: 564 LANSEKALECLQQVLYI 580
L + A+ C Q L I
Sbjct: 488 LNKYKDAIICYDQALSI 504
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 375 KSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ SI+ ++ +++G+A +Y AI +++ + +P Y +G A + +
Sbjct: 48 KAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAISINPNYDVTWYLKGHALSKLNQY 107
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQ----------ARAALGESVEAIQDLSKALEFEPN 481
+ AI + ++I NP+ W +G + + + + EAI+ KA+ PN
Sbjct: 108 QKAIECYDKSISINPNYDVTWFNKGNQLLEQHYIGISLSKINKYYEAIECYDKAIFINPN 167
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ +G K + A+E + ++ A+ G AL S+ +Y++A E +
Sbjct: 168 YDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYD 227
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+++ N W + +L ++A+EC + + I+ + A++ +G L+ L ++
Sbjct: 228 KAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKY 287
Query: 602 KKAIK 606
++A++
Sbjct: 288 QEAVE 292
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y Y+G AL S+ +Y++A E + KAI ++ N+ AW + L ++A+EC + +
Sbjct: 26 YYYIGNALKSLNKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAIS 85
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
I+ + ++L+G L L Q++KAI+
Sbjct: 86 INPNYDVTWYLKGHALSKLNQYQKAIE 112
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 198/477 (41%), Gaps = 55/477 (11%)
Query: 46 LCSLRNWSKAIRILDSLLA--QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
L SL + +AI D ++ +YE I N+ ++L ++ I +KA+ ++P
Sbjct: 33 LKSLNKYQEAIECYDKAISINPNYEAAWI-NKGLALNKLNQYQEAIECYNKAISINPNYD 91
Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
+ LKG A S L + ++A+ ++K +++ + D+ F + +LL ++
Sbjct: 92 VTWYLKGHALSKLNQYQKAIECYDKSI--SINPNYDVTWFNKGNQLLE----------QH 139
Query: 164 DVSNSMSSLTVSESGLNANDKMSETSENHN-----KSDICDSSSQSRDVSETCSKS-SHD 217
+ S+S + + DK + N++ K + ++ ++ E K+ S +
Sbjct: 140 YIGISLSKINKYYEAIECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISIN 199
Query: 218 PDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGS----KSTHASRDASEI 273
P+ + +++ S+ + + K +++ N+ G + + + ++A E
Sbjct: 200 PNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMEC 259
Query: 274 NRQS---SDDFDICNGPIDKASVNERHGRQ-----------TNGTHDV-HDKLSSDSASL 318
++ + ++D+ A +N H Q N +DV + + + L
Sbjct: 260 YNKAISINPNYDVAWNNKGNA-LNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKL 318
Query: 319 NDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKS 378
N E Y K+ IS N + D T + L+ SN K + + K+ S
Sbjct: 319 NKYKDAIECYKKA-ISINPNYDVTWFHNGLAL--------SNLNKYQE--AIECYDKAIS 367
Query: 379 ISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
I+ ++ +++G A +Y AI +D+ + + Y A +G A + + AI
Sbjct: 368 INPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAI 427
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ + I N ++ AW +G A + L + +AI+ KA+ +G++
Sbjct: 428 ECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLI 484
>gi|402771088|ref|YP_006590625.1| hypothetical protein BN69_0523 [Methylocystis sp. SC2]
gi|401773108|emb|CCJ05974.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. SC2]
Length = 291
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+T + + S + +RG+A G++ A++ F Q +K +P A R A
Sbjct: 67 LTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAIKLEPNNSAAYTNRALALRQMG 126
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +AA +DF AI+ NP A+ R A G +A+ DL +A+ P SA H R
Sbjct: 127 QSDAARADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHAR 186
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+++ K D AV D + D + Y G +L ++G+Y KA E A+ +D
Sbjct: 187 GLIHQKRGDDARAVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALNVDSK 246
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
AW L Y N KA E Q+ L +D +
Sbjct: 247 SALAWAWLGVAYDKSGNRSKARESFQRALTLDPQ 280
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 420 GRGTARAFQRELEAA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
GRG A + +A I+ TE I+ NPS+ EA+ RG A A +G EA+ D ++A+
Sbjct: 46 GRGIAEIADTDPNSASVNINSLTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAI 105
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ EPN N +AYT LAL +G+ A
Sbjct: 106 KLEPN----------------------------------NSAAYTNRALALRQMGQSDAA 131
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+AI+++ A+ + N ++AL L Q + ++ ++A+H RGL+
Sbjct: 132 RADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARGLIHQ 191
Query: 597 GLGQHKKAIKDL 608
G +A+ D
Sbjct: 192 KRGDDARAVTDF 203
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RGI D N+A ++++ ++ + N S AY G+A + +G +++A +AI+
Sbjct: 47 RGIAEIADTDPNSASVNINSLTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAIK 106
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ N A+ + + + S+ A + + ++ + + AY R LL G +A+
Sbjct: 107 LEPNNSAAYTNRALALRQMGQSDAARADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQAL 166
Query: 606 KDLSSGSR 613
DL R
Sbjct: 167 ADLDQAIR 174
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 53/209 (25%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN----------------EGKYA 398
L+ ++ A N+ + ++ +S + DF R I +VN +G
Sbjct: 107 LEPNNSAAYTNRALALRQMGQSDAARADF--DRAI-EVNPKHAPAYVGRANLLRAQGNLD 163
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A++ DQ ++ +P +A RG + + A++DF AI +P A + RG++
Sbjct: 164 QALADLDQAIRLNPESAQAFHARGLIHQKRGDDARAVTDFDNAIDRDPFAAAPYLARGES 223
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ +A++ DFNAA + +D ++
Sbjct: 224 LVTLGKYDKAVE---------------------------DFNAA-------LNVDSKSAL 249
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A+ +LG+A G KA E+ +A+ LD
Sbjct: 250 AWAWLGVAYDKSGNRSKARESFQRALTLD 278
>gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823]
gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 322
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 391 QVNEGKYAS---AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+++ KY S ++ I +K D EA + RG ++ +A++ D + I P
Sbjct: 23 EIDTSKYTSYRLSVRIASNRIKIDSTNAEAYLQRGYYLFLLKDFDASLRDTDKFISLEPK 82
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ R + + G +AIQD++KA+ EP++ D++++R + +K ++ A +DL
Sbjct: 83 VASAYQSRAKVSYSQGNIDQAIQDINKAISLEPDNIDMINDRSTLYYKAGNYEACKKDLL 142
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K D EN S YLG + Y KA I D + EA+ +L Y L ++
Sbjct: 143 YLLKKDPENLSFLLYLGYCETKQKNYSKAITHFQTLISKDSLYKEAYNNLGFCYYSLGDN 202
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
KAL+ + + L ID R+ +AY R + G +KKA++DL+ + ++ P L
Sbjct: 203 IKALKAINKALEIDPRYPEAYDKRSQVWMATGDYKKALEDLNK-ALSLYPFL 253
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ F L G + + Y+ AI+ F ++ +D +Y EA G + A+
Sbjct: 151 NLSFLLYLGYCETKQKNYSKAITHFQTLISKDSLYKEAYNNLGFCYYSLGDNIKALKAIN 210
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ +P EA+ +R Q A G+ +A++DL+KAL P + L+ R ++ + K +
Sbjct: 211 KALEIDPRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRALIYLEMKQY 270
Query: 500 NAAVEDLSACVKLDK 514
+ A+ D++ ++ K
Sbjct: 271 SDALGDMNLLLQTAK 285
>gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein
[Synechococcus sp. JA-3-3Ab]
gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp.
JA-3-3Ab]
Length = 952
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ G Y A++ + L+ DP + A RG A + + AI D++ A++
Sbjct: 370 FNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIEDYSRALEL 429
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG R LG++ A+ D S+ L +P + RG+ + DF A+E
Sbjct: 430 NPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIE 489
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE----------AW 554
D + ++LD + A GLA ++G+ + A +AI L E A
Sbjct: 490 DYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAE 549
Query: 555 GHLTQFYQDLANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + L+N+ E AL +Q L ++ + A+ RGL GLG A+ D +
Sbjct: 550 LYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFN 606
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 12/238 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + G A++ F ++L+ DP EA RG ARA + + AI D+T+A+Q
Sbjct: 438 FNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIEDYTQALQL 497
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF------EPNSA------DILHERGIV 492
+P +A RRG AR ALG+ AI D S+A+ EP+ A ++ +R +
Sbjct: 498 DPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAELYLQRAVA 557
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
AA+ D ++L+ A+ Y GLA +G+ A +A++LD +
Sbjct: 558 YLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRALELDPRLAK 617
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + +L + E AL L Q + +D A RG + LG A++D ++
Sbjct: 618 AYLKRGIAHLELGHLEAALADLNQAIALDASDVGARSSRGQVHRLLGDPLAALQDYTA 675
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG +A Q +L+ AI+D+T AIQ +P G A +RG R G+ A++D ++A++
Sbjct: 301 LVTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQ 360
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A RGI ++ ++ AV D + ++LD AY G A + + ++A
Sbjct: 361 LGGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAI 420
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E + +A++L+ + A+ + L +++ A+ +VL D + ++AY RG+
Sbjct: 421 EDYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQ 480
Query: 598 LGQHKKAIKDLS 609
L + AI+D +
Sbjct: 481 LLDFQGAIEDYT 492
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G AI+ + ++ DP A RG+ R + A+ DFT AIQ
Sbjct: 302 VTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQL 361
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ RG AR LG A+ D + AL +P+ A + RG + A+E
Sbjct: 362 GGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIE 421
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++L+ E AY G+ +G+ + A + ++ D EA+ + L
Sbjct: 422 DYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQL 481
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+E Q L +D KA + RGL LG + AI D S
Sbjct: 482 LDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFS 526
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G A A++ F++ L+ DP +A + RG A LEAA++D +AI +
Sbjct: 588 RGLARQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDA 647
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A RGQ LG+ + A+QD + ALE +P + + +RG + F+ +D+ AA ED
Sbjct: 648 SDVGARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDF 707
Query: 507 SACVK 511
S ++
Sbjct: 708 SQALQ 712
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 53/215 (24%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI-- 442
+RG+A+ + AI + Q L+ DP +P+A RG AR +L+ AI+DF++AI
Sbjct: 472 FNRGVARAQLLDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIAL 531
Query: 443 --------------------------------------------QSNPSAGEAWKRRGQA 458
+ NP+ A RG A
Sbjct: 532 RATQGEEPSGAVAAAQAELYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLA 591
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
R LG+ A+ D ++ALE +P A +RGI + + AA+ DL+ + LD +
Sbjct: 592 RQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVG 651
Query: 519 A-------YTYLGLALSSIGEYKKAEEAHLKAIQL 546
A + LG L+++ +Y A E + QL
Sbjct: 652 ARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQL 686
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ + L R +A ++ +A++ +Q L+ +P A RG AR + A++D
Sbjct: 545 AAQAELYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALAD 604
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F A++ +P +A+ +RG A LG A+ DL++A+ + + RG V+
Sbjct: 605 FNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVGARSSRGQVHRLLG 664
Query: 498 DFNAAVEDLSACVKLDKENKSAY 520
D AA++D +A ++ D N Y
Sbjct: 665 DPLAALQDYTAALERDPRNPQLY 687
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---ILH 487
L+ AI+D+T+ + NP A R GE A+ D ++ L+ EP+ L+
Sbjct: 816 LQQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYTQLLQLEPDPQTRLWALN 875
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG + DF AA+ D + ++ D + A+ LA +++G+++ A + A+QL
Sbjct: 876 NRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQL 934
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + AI+ + Q+L +P AL+ R E+E A++D+T+ +Q P
Sbjct: 806 RGDLHRQANRLQQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYTQLLQLEP 865
Query: 447 SAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
A RG A A G+ AI+D ++ LE +P+ R + D+ A
Sbjct: 866 DPQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGAC 925
Query: 504 EDLSACVKL 512
+D ++L
Sbjct: 926 QDFQTALQL 934
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 395 GKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
G+ A++ + Q+L+ +P P+ AL RG A A Q + AAI D+T+ ++ +PS +
Sbjct: 848 GEIERALADYTQLLQLEPD-PQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLERDPSHIK 906
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFE 479
A R ARAA+G+ A QD AL+ +
Sbjct: 907 AHCNRALARAAVGDWQGACQDFQTALQLQ 935
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 38/238 (15%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V R SRG G +A+ + L+ DP P+ RG Q + AA DF++
Sbjct: 650 VGARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQ 709
Query: 441 AIQ-----SNPSAGEAWKR----RGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+Q P + R RG AR L + A+ D + ++ +P ++ R
Sbjct: 710 ALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALRAA 769
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+ D AA+ DL + +++ GLA +++ Y++ + H +A +L
Sbjct: 770 VHLVLGDEEAALADLDRAIGCNRD-------WGLADAALA-YRQRGDLHRQANRL----- 816
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ QVL ++ + A R LL G+ ++A+ D +
Sbjct: 817 ----------------QQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYT 858
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G +A+AI + Q+L+ DP + +A R ARA + + A DF A+Q
Sbjct: 876 NRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQ 935
Query: 446 PSAGEAWK 453
G W+
Sbjct: 936 GYEGRLWE 943
>gi|124024557|ref|YP_001018864.1| hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
gi|123964843|gb|ABM79599.1| Hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
Length = 306
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+++ ++S +V F RG A+ N+G Y A++ F++ ++ +P A R + +
Sbjct: 38 TQVADAQSAAV-FN-KRGYAKFNKGDYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGD 95
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++D +AI NP A+ RG A+ LG+ AI D +KA+E P AD RG
Sbjct: 96 NQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRG 155
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ KD A+ D ++++ + AYT G A + +YK A KAI+++ +
Sbjct: 156 NAKYDLKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHL 215
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L + + A+ ++ + I+ +++ AY G+ +G K A D
Sbjct: 216 AAAYFNRGLAKRKLGDYQGAIPDYKKAIEINPQYAAAYRNSGIAKELVGDLKGACADWKE 275
Query: 611 GS 612
S
Sbjct: 276 AS 277
>gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia
stuttgartiensis]
Length = 610
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G +++ Y A+ +++ + P PEA + + + E AI A+QS
Sbjct: 33 INKGNILIHKQNYQDALHEYERAISLKPDAPEAWYNKAAVLDYMGDFERAIEAADMAVQS 92
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G+A G+ EAI+ KALE +P++ +L+ +G V+ D A+V+
Sbjct: 93 KPDYWEAWYMKGRASDHTGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDIEASVK 152
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-AEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ +KL + A+ GLAL+ I E + A EA+ +AI+++ + EAW + +
Sbjct: 153 TYDSILKLKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVR 212
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK------DLSSGSRTMMP 617
L +A++ + I + A+ +G L +G+H++A+ +LS GS
Sbjct: 213 LRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGS----- 267
Query: 618 HLIWN 622
+ WN
Sbjct: 268 YAAWN 272
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ +++ L P E + +G AI F AI+ P EAWK +G A
Sbjct: 321 AVAAYEKALIIQPDSYETMTNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNAL 380
Query: 460 AALGESVEAIQDLSKALEFEPNSADI------------LHERGIVNFKFKDFNAAVEDLS 507
A +G EA + +K + + + L GI + + AV +
Sbjct: 381 ARMGWLEEATESFAKVGQIITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYN 440
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++ ++ + G++ S + EY++A A KA L+ N EA+ + +++
Sbjct: 441 NALRIKNDDFDVWMNKGISHSFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKY 500
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++AL+ L + F +A + +GLLL +G H+ A+K ++ R
Sbjct: 501 QEALDAYDNALRLKPDFPEAMNNKGLLLDNIGNHEDAVKMYNNALR 546
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 14/237 (5%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVD-----FRLSRGI--AQVNEG-------KYASA 400
LK EA NK + RI + + I+++ R++ A +N+G +Y A
Sbjct: 160 LKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVRLRRYGEA 219
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +D +K P A +G A + E A+ F +AI+ +P + AW +G A
Sbjct: 220 IDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGSYAAWNGKGLALD 279
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+L +A++ K +E +P+S G+ + K + AV + + ++
Sbjct: 280 SLSRYEDALKAYEKTIEIQPDSYGAWTNMGLTLSRLKRHDEAVAAYEKALIIQPDSYETM 339
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
T G L +G Y +A +A +AI+L ++ EAW + + E+A E +V
Sbjct: 340 TNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKV 396
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 12/235 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
++G + G Y AI FD+ ++ P Y EA +G A A LE A F + Q
Sbjct: 341 NKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKVGQII 400
Query: 444 ------SNPSAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ P EA + G A L + +A+ + AL + + D+ +GI +
Sbjct: 401 TDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGISH 460
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ A+ L+ A+ Y G L +G+Y++A +A+ A++L +F EA
Sbjct: 461 SFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALRLKPDFPEA 520
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++ N E A++ L I+ F + L L + ++A+ L
Sbjct: 521 MNNKGLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKACALSLLSRKEEALDSL 575
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V R+SK I ++ + GIA + KYA A+++++ L+ + + +G + +F
Sbjct: 408 VPRLSK---IKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGISHSFLN 464
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E A++ F +A +A EA+ +G +G+ EA+ AL +P+ + ++ +
Sbjct: 465 EYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALRLKPDFPEAMNNK 524
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G++ + AV+ + ++++ + + ALS + ++A ++ KA+QL+
Sbjct: 525 GLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKACALSLLSRKEEALDSLEKAVQLN 582
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 24 DELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQL 82
D+ +R++ V A + LR + +AI D+ + + E N+ F + +
Sbjct: 190 DQAIRINPVYYEAWINKGNC--FVRLRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADM 247
Query: 83 ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
H+ + +KA++L P A+ KG A +L R E+AL +EK E
Sbjct: 248 GKHEEAVDAFNKAIELSPGSYAAWNGKGLALDSLSRYEDALKAYEKTIE 296
>gi|443476573|ref|ZP_21066472.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443018443|gb|ELS32690.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 822
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 21/252 (8%)
Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKET---------SNEAKRNKKFCVTRISKSKSI 379
++SS+ + + + R++ ++W++ ++ +R KK V +I KS ++
Sbjct: 376 AQSSLGNEQKALEDFDRARFDYEWNLRSRGGSRRDREYYADVLQRPKKAPVEQI-KSPTL 434
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S G A G Y AI+ + + ++ P + +A RG A+ + + AISD++
Sbjct: 435 S----YQSGNANSRVGNYRQAIADYSEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYS 490
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ P + A+ RG A++ LG+ AI D ++A+ +PN AD + RG D
Sbjct: 491 EAIRLKPDSINAFNNRGNAKSDLGDKEGAIADYNEAIRIKPNYADAYNGRGNAKSALGDQ 550
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ D + +++ ++ AY G A S++G+ + A +AI+L+ NFL Q
Sbjct: 551 QGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNSNFL-------Q 603
Query: 560 FYQDLANSEKAL 571
Y++ +NS+K L
Sbjct: 604 VYKNRSNSKKYL 615
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+D++EAI+ P +A+ RG A+ L + AI D S+A+ +P+S + + RG
Sbjct: 451 AIADYSEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYSEAIRLKPDSINAFNNRGNAK 510
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D A+ D + +++ AY G A S++G+ + +AI++ + +A
Sbjct: 511 SDLGDKEGAIADYNEAIRIKPNYADAYNGRGNAKSALGDQQGPIADFNEAIRISPDHYKA 570
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + L + + A+ + + ++ F + Y R LG + AI D
Sbjct: 571 YNNRGNARSALGDKQGAIADFNEAIRLNSNFLQVYKNRSNSKKYLGDEQGAIAD 624
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-GRGTARAFQRELEAAISDFTEAIQ 443
+ +G++ NE AIS +D++++ DP GR + + + AISD+ E I+
Sbjct: 629 IQQGVSSKNE---KVAISDYDELMRLDPSNKSKYYSGRARIKLKLEDYQGAISDYNEVIR 685
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--SADILHERGIVNFKFKDFNA 501
+ P+ +++ R A+ + AI D ++A+ + D + RG + KD+
Sbjct: 686 AEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIRISQGYENYDYYYIRGDAKLELKDYQG 745
Query: 502 AVEDLSACV 510
A++D + V
Sbjct: 746 AIDDYNQVV 754
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--------- 426
SK +S R I + G Y AI+ + ++++ +P +A R TA+
Sbjct: 57 SKRLSAQQLHDRAIKKRQGGDYEGAIADYTELIRLEPTNAKAYNDRATAKKEIASERKFG 116
Query: 427 -FQ---RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
FQ +L+ A++D EAI+ + R + + + + ++ D +A+ EP++
Sbjct: 117 DFQAKITDLKGALADNNEAIRLELQNASFYSSRAETKQKMNDFNGSLADYKEAMRLEPSN 176
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKL 512
D R + D+ AA+ D ++L
Sbjct: 177 DDFYRNRAALFVAISDYQAALADYDEAIRL 206
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 57/207 (27%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ G I+ F++ ++ P + +A RG AR+ + + AI+DF EAI+ N
Sbjct: 540 RGNAKSALGDQQGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNS 599
Query: 447 SAGEAWKRR-------GQARAALGESVEAIQ----------------------------- 470
+ + +K R G + A+ + +E IQ
Sbjct: 600 NFLQVYKNRSNSKKYLGDEQGAIADRIEFIQQGVSSKNEKVAISDYDELMRLDPSNKSKY 659
Query: 471 -------------------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
D ++ + EPN+AD R + ++ A++D + ++
Sbjct: 660 YSGRARIKLKLEDYQGAISDYNEVIRAEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIR 719
Query: 512 LDK--ENKSAYTYLGLALSSIGEYKKA 536
+ + EN Y G A + +Y+ A
Sbjct: 720 ISQGYENYDYYYIRGDAKLELKDYQGA 746
>gi|425469644|ref|ZP_18848563.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
gi|389880474|emb|CCI38768.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
Length = 260
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G + +A E + KA+ L R + Y E AL + L I+ F++AY
Sbjct: 150 GRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMALRDYDESLKINANFAEAY 209
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
H RGL + LG +KAI DL + +R +
Sbjct: 210 HNRGLTHYKLGNREKAIADLEAAARLAL 237
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L + Y AL R A ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG EAI+D +KAL + IL+ R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ Y E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG LG+H +AI+D +
Sbjct: 140 IYRGNAKDDLGRHPEAIEDYT 160
>gi|354567939|ref|ZP_08987106.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
gi|353541613|gb|EHC11080.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
Length = 759
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 15/267 (5%)
Query: 358 TSNEAKRN--KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------------KYASAIS 402
T+N+ K+N KK I +I + I VN +Y A+S
Sbjct: 333 TNNKRKKNITKKILAGTIILGLAIGASLYIINSINSVNATELYKKANTFYELQRYQDALS 392
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
F++ +K P Y EA G+G+ + +E +AA++ + AIQ P EAW RG L
Sbjct: 393 AFEKAVKIRPDYAEAWNGQGSTLSKLKEYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNL 452
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
EAI KAL+ + NS + +G V K ++ A+ + L K++ +A+
Sbjct: 453 QRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAYEQAINLKKDDYTAWYN 512
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
L L ++ Y++A A+ KA+++ ++ EAW + +L + A + + I+
Sbjct: 513 KALTLQNLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINP 572
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +A+ RG +L L ++ +A++ L+
Sbjct: 573 TYYQAWLSRGNILISLQRYPEAVESLN 599
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 105/210 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +A++ +D+ ++ P Y EA IGRG + + AI+ F +A+Q + ++ + W +
Sbjct: 420 EYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTK 479
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ ++L EAI +A+ + + + + + K + AV V++
Sbjct: 480 GEVLSSLKRYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAYDKAVEIKPS 539
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++ Y+ A A+ KA+Q++ + +AW L +A+E L
Sbjct: 540 YAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLN 599
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
QV+ I+ + +A++ +G H + ++ +A+
Sbjct: 600 QVIQINPQNYQAWYAKGWSQHQMQRYNEAL 629
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 81/162 (50%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y A+ +D+ ++ P Y EA RG A + + A + + +A+Q NP+ +AW
Sbjct: 519 NLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAW 578
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG +L EA++ L++ ++ P + + +G + + +N A+ +L
Sbjct: 579 LSRGNILISLQRYPEAVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAEL 638
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + G +L ++ +Y++A ++ +A++ + E+W
Sbjct: 639 KRNDYQLWYNRGNSLYNLQKYEEAIASYDRAVRYNPQHYESW 680
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 396 KYASAISIFDQI--LKED---PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+Y AIS ++Q LK+D Y +AL + R E A+ + +A++ PS E
Sbjct: 488 RYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKR-----YEEAVRAYDKAVEIKPSYAE 542
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW RG A L +A KA++ P RG + + + AVE L+ +
Sbjct: 543 AWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVI 602
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+++ +N A+ G + + Y +A A+ +A +L RN + W + +L E+A
Sbjct: 603 QINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEA 662
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + + + +++ RG L L ++++AI
Sbjct: 663 IASYDRAVRYNPQHYESWFSRGNALFNLLRYQEAI 697
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 34/168 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN +Y A + +D+ ++ +P Y +A + RG + A+ + IQ N
Sbjct: 546 NRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVIQIN 605
Query: 446 PSAGEAWKRRG----------QARAALGESVE------------------------AIQD 471
P +AW +G +A AA ++ E AI
Sbjct: 606 PQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEAIAS 665
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A+ + P + RG F + A+ + +K+ +N+ A
Sbjct: 666 YDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYNQAIKIKPDNQQA 713
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD-SLLAQS 66
++ Y L + + ++ V++ A A + + L L+ + A+ D ++ Q
Sbjct: 379 NTFYELQRYQDALSAFEKAVKIRPDYAEAWNG--QGSTLSKLKEYKAALTAYDRAIQIQP 436
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
++ R F L+ ++ I DKALQLD Q + KG S+L R +EA+S +
Sbjct: 437 DYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAY 496
Query: 127 EKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSL 172
E+ Y +++ L+ EE + A D++V + Y+ N++ +L
Sbjct: 497 EQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAY--DKAVEIKPSYAEAWYNRGNALVNL 554
Query: 173 TVSESGLNANDKMSETSENHNKS 195
+ A DK + + + ++
Sbjct: 555 QRYQDAFTAYDKAVQINPTYYQA 577
>gi|384210297|ref|YP_005596017.1| hypothetical protein Bint_2843 [Brachyspira intermedia PWS/A]
gi|343387947|gb|AEM23437.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 233
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 103/194 (53%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EGKY AI +++ ++ DP Y A RG+ +A E E AI D+ AI+ + + A+
Sbjct: 26 EGKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYN 85
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A+ LGE EAI+D KA+E + + +D + RGIV + +++D + ++L+
Sbjct: 86 NRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELN 145
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G +G+Y +A + + KAI+L+ N + + ++L +AL+
Sbjct: 146 PNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKD 205
Query: 574 LQQVLYIDKRFSKA 587
++ L +D + A
Sbjct: 206 YKKALELDPNYDIA 219
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 90/165 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G+Y AI +D ++ D Y A RG A+ + E E AI D+ +AI+ +
Sbjct: 52 NRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIELD 111
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG + LG+ ++I+D +K +E PN +D + RG V + A++D
Sbjct: 112 SDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKD 171
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++L+ N + Y G++ ++ EY +A + + KA++LD N+
Sbjct: 172 YDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYKKALELDPNY 216
Score = 73.6 bits (179), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI +KA+E +PN + + RG V ++ A++D ++LD AY
Sbjct: 27 GKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLA +GEY++A + + KAI+LD ++ +A+ + L E +++ +V+ ++
Sbjct: 87 RGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNP 146
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKD 607
S AY+ RG + LG++ +AIKD
Sbjct: 147 NDSDAYYNRGTVKDVLGKYGEAIKD 171
Score = 70.1 bits (170), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI + +AI+ +P+ A+ RG +A LGE EAI+D A+E + N + RG+
Sbjct: 30 EEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRGL 89
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ A++D ++LD + AY G+ + +G+Y+ + + K I+L+ N
Sbjct: 90 AKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPNDS 149
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+ + L +A++ + + ++ Y+ RG+ L ++ +A+KD
Sbjct: 150 DAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKD 205
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 62/111 (55%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ + ++LD +AY G + +GEY++A + + AI+LD N+ A+ +
Sbjct: 29 YEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRG 88
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L E+A++ + + +D +S AY+ RG++ + LG+++ +IKD +
Sbjct: 89 LAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFN 139
>gi|427719642|ref|YP_007067636.1| hypothetical protein Cal7507_4431 [Calothrix sp. PCC 7507]
gi|427352078|gb|AFY34802.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 224
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Query: 380 SVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ DF+ ++G+ ++ +G + AI+ F+ +++ +P + E RG A++ R+ +AAI+D
Sbjct: 34 AADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGFCLRGLAKSQLRDFKAAIAD 93
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +A++ NP+ +A+ RG A A LG +AI D + ++ +P S D + G N++
Sbjct: 94 YNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQG 153
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A+ + ++ +K++ AY GLA ++GE + A
Sbjct: 154 NHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTA 192
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 399 SAISIFDQILKEDPMYP------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
SA+S + +P P + +G + Q AI+DF +Q NP E +
Sbjct: 15 SALSGMPTVFAREPQIPLKAADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGF 74
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A++ L + AI D ++AL PN AD + RG + A+ D +K+
Sbjct: 75 CLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKI 134
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D + AY LG A G +K+A A++++ N +A+G+ L A+
Sbjct: 135 DPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTAIA 194
Query: 573 CLQQ 576
LQQ
Sbjct: 195 DLQQ 198
Score = 72.8 bits (177), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 69/136 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ + +AI+ ++Q L+ +P + +A RGTA A L AI+DF + I+ +P
Sbjct: 77 RGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDP 136
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ +A+ G A G +AI + + AL+ PN AD RG+ + + A+ DL
Sbjct: 137 TSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTAIADL 196
Query: 507 SACVKLDKENKSAYTY 522
KL E Y
Sbjct: 197 QQAAKLFSEQGDTQRY 212
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
AL G T A + ++ +DF + + +G + G AI D + +
Sbjct: 16 ALSGMPTVFAREPQIPLKAADF-----------QGYYNQGVQKLEQGNFNGAIADFNSVV 64
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ P + RG+ + +DF AA+ D + ++L+ + AY G A + +G A
Sbjct: 65 QLNPQFYEGFCLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDA 124
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ I++D ++A+ +L N ++A+ L I+ + AY RGL +
Sbjct: 125 IADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQY 184
Query: 597 GLGQHKKAIKDLSSGSR 613
LG+ + AI DL ++
Sbjct: 185 ALGEKRTAIADLQQAAK 201
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G AI+ F Q +K DP +A G+A Q + AI++F A++ N
Sbjct: 110 SRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKIN 169
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
P+ +A+ RG A+ ALGE AI DL +A + D
Sbjct: 170 PNLADAYGNRGLAQYALGEKRTAIADLQQAAKLFSEQGD 208
>gi|302838049|ref|XP_002950583.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
gi|300264132|gb|EFJ48329.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
Length = 1402
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR------------ELEAA 434
R A +GK A+ + + L+ D + + L RG + R ELEAA
Sbjct: 856 RAFALRQQGKLVEAVREYTRALELDSNHFKTLFNRGFT--YDRGHGWLSRLPPLGELEAA 913
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ D+T A+Q +P + A RG R L + A+ D + A+ EPNSAD H RG
Sbjct: 914 VEDYTAALQVDPQSSYAHYNRGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALR 973
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K F AAV+D + +KL+ + AY + ++A + + KA++++ N A
Sbjct: 974 KQGMFEAAVQDYTMAIKLNPNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATAL 1033
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ ++ S+ AL+ + + D +++Y+ RG+LL LG+ ++A DL
Sbjct: 1034 LNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQSDLDMAVVL 1093
Query: 615 MMP 617
M P
Sbjct: 1094 MQP 1096
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + +A A++ F + +P + RG A Q EAA+ D+T AI+ N
Sbjct: 933 NRGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALRKQGMFEAAVQDYTMAIKLN 992
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R L +AI D +KALE EPN+A L RG ++ + + A++D
Sbjct: 993 PNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATALLNRGSLHERNGRSDMALQD 1052
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ D +Y G+ L +G ++A+
Sbjct: 1053 FDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQ 1084
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S DF +RG A +G + +A+ + +K +P + A R ++ AI D+T
Sbjct: 961 SADFYHNRGFALRKQGMFEAAVQDYTMAIKLNPNHCRAYYNRAFCHDRLNHVQQAIDDYT 1020
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF--- 496
+A++ P+ A RG G S A+QD +A+ +PN A + RG++
Sbjct: 1021 KALEMEPNNATALLNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRL 1080
Query: 497 ----KDFNAAV---------------EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
D + AV +DL+ + LD + +Y+ +GEY+ A
Sbjct: 1081 EEAQSDLDMAVVLMQPPSALLFRNRAQDLTRAISLDPGDLLSYSRRAHCFRRMGEYESAI 1140
Query: 538 EAHLKAIQLDRN 549
+ +AI L N
Sbjct: 1141 RDYTRAITLSPN 1152
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L G R R+ I++ TE + SNP A + R Q+ LGE A+ D + L
Sbjct: 53 LPGGNGRRTITRDYHRLINECTEKLLSNPKHTLAMRLRAQSYRMLGEDDAALADYNSLLA 112
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
EP + D L RG + + + + A++ +A ++ + ++ A + S+ G + +A
Sbjct: 113 LEPTNVDALFYRGTILERQQHIDEAIQCYTAVLQQEPQHHKALYNRAVCFSAKGSFSQAI 172
Query: 538 EAHLKAIQLDR 548
E AI+LD+
Sbjct: 173 EDFSAAIELDQ 183
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 73/201 (36%), Gaps = 35/201 (17%)
Query: 365 NKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKED 411
N+ FC R++ + D+ L+RG G+ A+ FD+ + D
Sbjct: 1001 NRAFCHDRLNHVQQAIDDYTKALEMEPNNATALLNRGSLHERNGRSDMALQDFDRAIMGD 1060
Query: 412 PMYPEALIGRGTARAFQRELEAAISDF----------------------TEAIQSNPSAG 449
P ++ RG LE A SD T AI +P
Sbjct: 1061 PNCAQSYNARGVLLQHLGRLEEAQSDLDMAVVLMQPPSALLFRNRAQDLTRAISLDPGDL 1120
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
++ RR +GE AI+D ++A+ PN+ + R + +N AV D
Sbjct: 1121 LSYSRRAHCFRRMGEYESAIRDYTRAITLSPNNPKLHTIRAYCYAMIEWYNEAVMDYDIV 1180
Query: 510 VKLDKENKSAYTYLGLALSSI 530
+ L+ N A +AL +
Sbjct: 1181 ISLEPGNAHASYNRSIALEKL 1201
>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
Length = 713
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY A++ +DQ ++ P Y EA GRG R QR E AI+ F +A+Q + +A E W
Sbjct: 391 KYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPE-AIASFDKALQLDNTAPEIWNA 449
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+ L + AIQ ++A+E +PN + +G+ K +N A+ ++
Sbjct: 450 KGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKP 509
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ LG AL ++ + A +A+ KA+Q F AW + L +A+E
Sbjct: 510 DYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESF 569
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + + +A++ RG LH ++++AI
Sbjct: 570 DQAIKHNPNDYQAWYSRGWALHQSQRYEEAI 600
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F V I+ +I++ +G +Y A++ + + + P Y G+G +
Sbjct: 332 FIVNSINAHNAIALS---EQGSTLFELQRYQDALAAYQEAVSISPDYVPGWNGQGKTLSQ 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ E A++ + +AIQ P EAW RG L EAI KAL+ + + +I +
Sbjct: 389 LKKYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEAIASFDKALQLDNTAPEIWN 448
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + + +N A++ + ++L A+ GLA ++ +Y A A+ AI+
Sbjct: 449 AKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFK 508
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ +AW L +L + AL+ + + +F A+ R +L L ++ +AI+
Sbjct: 509 PDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIES 568
Query: 608 L 608
Sbjct: 569 F 569
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y +AI ++Q ++ P Y +A +G A ++ AI+ + AI+ P G+AW
Sbjct: 456 NLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKPDYGQAW 515
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G A L A++ KA+++ P R + + + A+E +K
Sbjct: 516 YSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESFDQAIKH 575
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + A+ G AL Y++A ++ KA + RN + W +L L ++A+
Sbjct: 576 NPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIA 635
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +++++ RG L L ++K+AI
Sbjct: 636 SYDKAVRYQTNHAESWYSRGNALLNLQRYKEAI 668
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 90/206 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A N +Y AI+ ++ ++ P Y +A G A + A+ + +A+Q
Sbjct: 483 SKGLAFHNLKQYNDAINAYETAIEFKPDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYR 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW R L +AI+ +A++ PN + RG + + + A+
Sbjct: 543 PKFYPAWFSRSNILIILRRYPQAIESFDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIAS 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + + + LG + + +Y++A ++ KA++ N E+W +L
Sbjct: 603 YNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIASYDKAVRYQTNHAESWYSRGNALLNLQ 662
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLR 591
++A++ Q + + +A + R
Sbjct: 663 RYKEAIDSYDQAIKYKPNYRQAINAR 688
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L K + + D+ +++ A + R + L L+ + +AI D L +
Sbjct: 388 QLKKYEEALAAYDQAIQIQPDYVEAWSGRGFV--LRDLQRYPEAIASFDKALQLDNTAPE 445
Query: 72 ICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
I N + + L+ + + I+ ++A++L P QA+ KG AF L + +A++ +E
Sbjct: 446 IWNAKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAI 505
Query: 131 E 131
E
Sbjct: 506 E 506
>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
PT]
Length = 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 15/248 (6%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+S+ L + + +G Y AI +D++L DPM A GRG A E A+ +
Sbjct: 2 VSIAALLQKAEEKYLDGSYDEAIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECY 61
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------------NSA 483
+ AI+++P AW+ R + LG EAI +A++ +P + A
Sbjct: 62 SRAIEADPECVPAWECRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDA 121
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ ++G+ + A+E + +D + LG +L +IG + +A E +A
Sbjct: 122 ESWRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERA 181
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L + W + + ++ALEC ++ L +D +A+H +G+ +G K
Sbjct: 182 LELSPSDSACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSK 241
Query: 604 AIKDLSSG 611
AI + S
Sbjct: 242 AIDAIDSA 249
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 126/286 (44%), Gaps = 7/286 (2%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSF---KWDMLKETSNEA-KRNKKFCVTRISK---SKS 378
E YS++ +D + + E R+++ F + D + EA R+ + + I + S+
Sbjct: 59 ECYSRAIEADPECVPAWECRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRP 118
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ +G+A ++ G+Y AI + L DP G + A+ F
Sbjct: 119 DDAESWRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECF 178
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ +PS W R G++ + G EA++ +AL +P S H +GI
Sbjct: 179 ERALELSPSDSACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGI 238
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ + + + LD E+ ++ G+ ++G Y+ A E + +++D A
Sbjct: 239 PSKAIDAIDSALTLDPEHAQSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALKSRA 298
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +AL + + ++ A++ G++L LG++ ++
Sbjct: 299 WSLYNLGRYAEALSACEGAISVNPLDEDAWYNMGIVLKALGRYTES 344
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ DP +A G+G AI A+ +P ++W
Sbjct: 203 GRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDPEHAQSWYA 262
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A+G +A++ + L +P +A L R + + A+ + ++
Sbjct: 263 KGITFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALSACEGAISVNP 322
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ A+ +G+ L ++G Y +++ A +KA ++
Sbjct: 323 LDEDAWYNMGIVLKALGRYTESDMAFIKAREI 354
>gi|443661142|ref|ZP_21132694.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332373|gb|ELS46985.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 970
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 364 RNKKFCVTRISKSKSISV----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ K R+S + + + +F +G +V G + AI+ +DQ L+ P +A
Sbjct: 155 QGKTSTTQRLSTANNTPIVQDAEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWY 214
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A E AI+ + A++ P EAW RG A LG EAI +ALE +
Sbjct: 215 NRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIK 274
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + + RGI F A+ +++ + A+ G+AL ++G +++A +
Sbjct: 275 PDCHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIAS 334
Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALE 572
+A+++ ++ EAW G+L +F Q +A+ ++ALE
Sbjct: 335 WDRALEIKPDYHEAWNNRGIALGNLGRFEQAIASFDRALE 374
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ E+G DF A+ +++ + A+ G+AL ++G +++A ++ +
Sbjct: 176 AEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDR 235
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A++ +F EAW + ++L E+A+ + L I +A++ RG+ LH LG+
Sbjct: 236 ALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFA 295
Query: 603 KAI 605
+AI
Sbjct: 296 EAI 298
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I D + A T R LA L +L + +AI D L EI+
Sbjct: 223 LGRFEQAIASYDRALEFKPDFHEAWTNR-GLA-LKNLGRYEEAIASYDRAL----EIKPD 276
Query: 73 CNRAFCYSQLELHK-----HVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
C+ A+ + LH I D+AL++ P +A+ +G A LGR E+A++ W+
Sbjct: 277 CHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWD 336
Query: 128 KGYE 131
+ E
Sbjct: 337 RALE 340
>gi|423066143|ref|ZP_17054933.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
gi|406712185|gb|EKD07374.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
Length = 843
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+S FDQ LK P + +A RG E E AIS + +A++ EAW
Sbjct: 5 GEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYN 64
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LGE +AI +AL+++P+ + RG ++ A+ +K
Sbjct: 65 RGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKP 124
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A++ G ALS +GEY++A ++ +A + +F AW + +DL E+A+
Sbjct: 125 DFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSY 184
Query: 575 QQVLYIDKRFSKAYHLRGL 593
Q L F +A+ RG+
Sbjct: 185 DQALKYKPDFHEAWANRGI 203
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+Y AIS +DQ LK Y EA RG A E E AIS F +A++
Sbjct: 30 NRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYNRGNALYNLGEYEQAISSFDQALKYK 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +AL+++P+ RG ++ A+
Sbjct: 90 PDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISS 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
K + A+ G AL +GEY++A ++ +A++ +F EAW
Sbjct: 150 YDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAWA 199
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + G+Y AIS FDQ LK P + A RG A + E E AIS + +A +
Sbjct: 97 LNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISSYDQARKY 156
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P AW RG A LGE +AI +AL+++P+ + RGI
Sbjct: 157 KPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAWANRGIA 204
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LGE +A+ +AL+++P+ D + RG V + ++ A+ +K ++ A+
Sbjct: 4 LGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWY 63
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G AL ++GEY++A + +A++ + EAW + DL E+A+ Q L
Sbjct: 64 NRGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYK 123
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAI 605
F A+ RG L LG++++AI
Sbjct: 124 PDFHGAWSNRGGALSDLGEYEQAI 147
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%)
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ +GEY++A + +A++ +F +AW + DL E+A+ Q L + + +
Sbjct: 1 MKDLGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHE 60
Query: 587 AYHLRGLLLHGLGQHKKAI 605
A++ RG L+ LG++++AI
Sbjct: 61 AWYNRGNALYNLGEYEQAI 79
>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 1675
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 140/335 (41%), Gaps = 15/335 (4%)
Query: 286 GPIDKASVNER-----HGRQTNGTHDVHDKLSSDSASLNDS--NTNSESYSKSSISDNKS 338
P D ++ N+R H + D + K + SL+D+ N + S
Sbjct: 426 APKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAIS 485
Query: 339 SDSTESRSKLSF--KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVN 393
S +R F W+ L +R + + ++ I F ++G+AQ +
Sbjct: 486 SYEQATRLYPEFYTAWNNLGVAQFHLQRYEA-AIASYERTLQIQPQFHQAWYNKGMAQFH 544
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y A++ +D+ LK P Y +A G E AIS + ++ NP AW
Sbjct: 545 LSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWY 604
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A G EAI+ KAL F+PN + H RG K + A+ + +
Sbjct: 605 NHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDIL 664
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS-EKALE 572
EN + G +L+++G Y A E++ + +QL E W H Q L ALE
Sbjct: 665 PENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIW-HSYGIVQGLRQEYTAALE 723
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L I+ F ++++ RG L LG+H+ AI +
Sbjct: 724 SYDRALAINPNFYQSWYERGNALAELGRHEYAITN 758
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 1/219 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ + G++ +A++ + Q L+ +P E RG E A+ + A +S+P+
Sbjct: 1151 GKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLERWEDALISYDRATESDPN 1210
Query: 448 AGEAWKRRGQARAALGE-SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +RGQA+ L E E +Q +AL +PN +++G + F+ AAVE
Sbjct: 1211 YALAWYQRGQAQFQLHEDPAENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESY 1270
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L E+ + G L S+ Y A E++ KA+ L F ++W + + L
Sbjct: 1271 ERALQLKPEDYYIWNNHGNVLGSLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKR 1330
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A ++ L I ++ ++ RG+ L +G ++A+
Sbjct: 1331 YEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEAL 1369
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G V G++ A++ +D+ L+ P EA RG + AI + +I+ NP
Sbjct: 131 GWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPE 190
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW ++G+A LG A+ +ALE P+ + L +G + F AA
Sbjct: 191 DRFAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYE 250
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +D ++ A+ G L +G+ + A +A+ KA++LD F +AW +L + + +
Sbjct: 251 QSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSF 310
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWR 627
+ AL C + + + F A+ +G +L LG + A+ + T + L + R
Sbjct: 311 QDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAAL-----AAYTKVTQLQPDFDRAW 365
Query: 628 NLCFNAW-------PFIRRRLLCTRL 646
N C N P +RR + T+L
Sbjct: 366 NYCGNILFHLGELEPALRRYEMVTKL 391
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ ++ + K P E RG + A++ +T+A P AW
Sbjct: 376 GELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWND 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG A+ KA + EP+ +D + G FK F A+ +L
Sbjct: 436 RGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
E +A+ LG+A + Y+ A ++ + +Q+ F +AW + + QF+ L+ ++AL
Sbjct: 496 EFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKGMAQFH--LSQYDRALA 553
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L + + +A++ G +L LG++++AI
Sbjct: 554 SYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAI 586
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 410 EDPMYP------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
E P YP EA +G R+L+ A++ + + I+ P EAW G LG
Sbjct: 79 EPPNYPVATDDPEAWYRQGNLYRDARKLDVALACYNKTIELQPHKQEAWANLGWVLVGLG 138
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EA+ +ALE P + RG V F+ + A+E+ ++L+ E++ A+
Sbjct: 139 RWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPEDRFAWYQK 198
Query: 524 GLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL +G Y +A A+ +A+++ D L G L F+ + + A C +Q L+I
Sbjct: 199 GRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLL-FH--IGQVQAACGCYEQSLHI 255
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAI 605
D A++ G +L LGQ + AI
Sbjct: 256 DPSDRFAWNNHGQVLFQLGQIRAAI 280
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI Q +Y +A+ +D+ L +P + ++ RG A A E AI+++ AI
Sbjct: 707 SYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAIL 766
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A + +GQ+ L EAI AL P+S D +RG + + ++ A+
Sbjct: 767 PSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYS 826
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + + G L + Y +A + +AI+L+ +W L + L
Sbjct: 827 YQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLG 886
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSSGSRTM--M 616
SE A++ +Q + + + A+H G L LG +++AI + T M
Sbjct: 887 RSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGM 946
Query: 617 PHLIWNL 623
+L+W L
Sbjct: 947 GNLLWQL 953
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A G Y A++ +D+ L+ P L +G +++AA + +++ +P
Sbjct: 198 KGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQSLHIDP 257
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S AW GQ LG+ AI KALE + + G+ +F+ K F A+
Sbjct: 258 SDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCY 317
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++L E ++A+ G L +G+++ A A+ K QL +F AW + L
Sbjct: 318 RAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGE 377
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
E AL + V + + ++ + RG +L L + ++A+ + + T+ P
Sbjct: 378 LEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQAT-TLAP 427
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + G+Y AIS ++ LK +P + A G A Q AI + +A+ P+
Sbjct: 573 GFVLFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPN 632
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
W RG+A A L EA+ ++++ P + + ++RG + A+E
Sbjct: 633 DPYLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYD 692
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L ++ + G+ EY A E++ +A+ ++ NF ++W +L
Sbjct: 693 RTLQLRPKDPEIWHSYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRH 752
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + + I F+ A +G L L ++ +AI
Sbjct: 753 EYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAI 790
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 116/234 (49%), Gaps = 3/234 (1%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ +I+ +F S RG A G++ AI+ +D+ + P + A G+G + +
Sbjct: 727 RALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRY 786
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI+ + A+ + P + + W +RG A L EA+ +AL+ ++A + H +G
Sbjct: 787 AEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGK 846
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + + A+ ++L+ E+ ++ LGL + +G + A +++ +AI+L ++
Sbjct: 847 TLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYH 906
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW +L + L +++ A ++ + + + ++ G LL LG+ +A+
Sbjct: 907 PAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAM 960
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+ ++G+ A AI +D+ L P P RG A A A++ F +I
Sbjct: 605 NHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDIL 664
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RGQ+ AALG A++ + L+ P +I H GIV +++ AA+E
Sbjct: 665 PENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSYGIVQGLRQEYTAALES 724
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++ ++ G AL+ +G ++ A + +AI + +F A
Sbjct: 725 YDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPA 772
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ + Q P A RG A E A+ + +A Q PS +AW G+ +
Sbjct: 415 ALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQ 474
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG+ AI +A P + G+ F + + AA+ +++ + A
Sbjct: 475 FKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQA 534
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+A + +Y +A ++ + ++L ++ +AW +L L E+A+ L
Sbjct: 535 WYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLK 594
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGSRTMMPHL 619
++ F A++ G+ L G+ +AI+ D + G + P+L
Sbjct: 595 LNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYL 636
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +A++ + ++ + P + A G ELE A+ + + P E W
Sbjct: 342 GDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSN 401
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L EA+ ++A P A ++RG F + A++ +L+
Sbjct: 402 RGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEP 461
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLANSEKALE 572
A+ LG +G+++ A ++ +A +L F AW +L QF+ L E A+
Sbjct: 462 SLSDAWNNLGKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFH--LQRYEAAIA 519
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
++ L I +F +A++ +G+ L Q+ +A L+S RT+
Sbjct: 520 SYERTLQIQPQFHQAWYNKGMAQFHLSQYDRA---LASYDRTL 559
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 1/222 (0%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A + + + L DP +P A +G LEAA+ + A+Q P W G
Sbjct: 1230 AENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQLKPEDYYIWNNHGN 1289
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+L AI+ KAL +P H RG F K + A +++ N
Sbjct: 1290 VLGSLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNA 1349
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ G+AL IG +++A + ++I++D+ + W + L E A+ C
Sbjct: 1350 QIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNC 1409
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
++ +AYH RG+ LG+ A+ + T+ P L
Sbjct: 1410 AILNPDELQAYHYRGIASLELGRWDAAVASFDR-ALTLSPAL 1450
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A + + A+ + ++ P + A +G F + EAA++ +T+ Q P
Sbjct: 301 GVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPD 360
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW G LGE A++ + +P A+ RG V A+ +
Sbjct: 361 FDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLA 565
L ++ SA+ G A+ +G Y+ A + + KA QL+ + +AW +L TQF L
Sbjct: 421 QATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQF--KLG 478
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
E A+ +Q + F A++ G+ L +++ AI +S RT+
Sbjct: 479 KFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAI---ASYERTL 525
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 2/247 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R++ + S D S G ++ A++ ++ L + +A +G A
Sbjct: 996 CYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAAL 1055
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A S + A+ +P + + +AA G+ A+ +A+E +P++ +I +
Sbjct: 1056 NRWEDANSCYERALSLDPQNQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQ 1115
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G ++ + ++N AV L + E+ ++ LG A GE+ A A+ +A++L+
Sbjct: 1116 HGQISIELGNYNTAVASLQTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEP 1175
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E W L E AL + D ++ A++ RG L H+ ++L
Sbjct: 1176 HRAETWYDRGYLLGQLERWEDALISYDRATESDPNYALAWYQRGQAQFQL--HEDPAENL 1233
Query: 609 SSGSRTM 615
S R +
Sbjct: 1234 QSYQRAL 1240
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 20/227 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A + G + A++ +++ ++ D + P+ + RGTA + E AI+ + N
Sbjct: 1354 GRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILN 1413
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--------------------SADI 485
P +A+ RG A LG A+ +AL P +A
Sbjct: 1414 PDELQAYHYRGIASLELGRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTAST 1473
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG F+ + A+ K+ E+ +T G ++ +Y +A + + +++
Sbjct: 1474 WNSRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLK 1533
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+D N W Q L + A+ L + + ID +F A + RG
Sbjct: 1534 IDANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRG 1580
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 3/242 (1%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
++ +T ++ +I F + +G + +YA AI+ +D L P + RG
Sbjct: 753 EYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGY 812
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A + A+ + +A++ N SA W +G+ L EA+ +A+E
Sbjct: 813 AFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDY 872
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
++ G+ A++ ++L + A+ LG L+ +G+ A A+ +A
Sbjct: 873 HSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERA 932
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I + W + L +A+ +QV + ++A++ +G L L Q ++
Sbjct: 933 IAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWER 992
Query: 604 AI 605
A+
Sbjct: 993 AV 994
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ +AI + + L+ D + +A G A Q+ + A+ + AI+ P AW
Sbjct: 274 GQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCN 333
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+ LG+ A+ +K + +P+ + G + F + A+ KL
Sbjct: 334 QGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQP 393
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ ++ G L + ++A + +A L AW + L E AL+C
Sbjct: 394 QLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCY 453
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
++ ++ S A++ G LG+ + AI +R + P T W NL
Sbjct: 454 RKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATR-LYPEFY---TAWNNL 504
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G A+ + Q K P P +G ++ A+ + +++ +
Sbjct: 1476 SRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKID 1535
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W ++ ++ ALG AI L+KA+E +P + RG + ++F AA+ D
Sbjct: 1536 ANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTD 1595
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ LD + +A+ G L + A + +A L+ E W + + + L
Sbjct: 1596 YEVTLNLDPDRAAAWNSRGNCLLELKILDNALFSFQQATGLEPENSEYWFNQGRAHSSLQ 1655
Query: 566 NSEKALECLQQVLYIDKR 583
E+A C QQ + +R
Sbjct: 1656 QWEEAENCYQQARSLTQR 1673
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ L P + ++ RG A + E A + +++ +P + W R
Sbjct: 1296 RYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGR 1355
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +G EA+ +++E + + RG F + A+ C L+ +
Sbjct: 1356 GMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPD 1415
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
AY Y G+A +G + A + +A+ L
Sbjct: 1416 ELQAYHYRGIASLELGRWDAAVASFDRALTL 1446
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 2/227 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDF 438
S D RG A + + A+ + Q LK + +G T QR EA ++ +
Sbjct: 803 SFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEA-LTVY 861
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
AI+ N +W G A LG S +AI +A+E +P+ H G + D
Sbjct: 862 ERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGD 921
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A + ++ + +G L +GE +A A+ + L + EAW
Sbjct: 922 TDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQG 981
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ Q L E+A+ C ++V + + G +L L +H++A+
Sbjct: 982 KALQALQQWERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEAL 1028
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 20/244 (8%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + + L+RG A + KY AI+ +D +P +A RG A
Sbjct: 1371 CYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLEL 1430
Query: 429 RELEAAISDFTEAIQSNPSAGEA--------------------WKRRGQARAALGESVEA 468
+AA++ F A+ +P+ E W RG A LG A
Sbjct: 1431 GRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQLGNLEGA 1490
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ +A + P +G + + + A++ +K+D + + + ++
Sbjct: 1491 LHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQ 1550
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
++G A + KA+++D F+ A Y E AL + L +D + A+
Sbjct: 1551 ALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAW 1610
Query: 589 HLRG 592
+ RG
Sbjct: 1611 NSRG 1614
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 23/262 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y A + ++ L+ P + GRG A + A++ + +I+ +
Sbjct: 1320 NRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEALACYERSIEID 1379
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W RG A L + +AI P+ H RGI + + ++AAV
Sbjct: 1380 KLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLELGRWDAAVAS 1439
Query: 506 L------------------SACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHLKAIQ 545
S V + K +A T+ G AL +G + A ++ +A +
Sbjct: 1440 FDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQLGNLEGALHSYRQATK 1499
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ W + + +L +AL+C Q L ID + ++ + + LG+ AI
Sbjct: 1500 VAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQALGRLDAAI 1559
Query: 606 KDLSSGSRTMMPHLIWNLTRWR 627
L+ + P I L R+R
Sbjct: 1560 ISLTKAVE-IDPQFI--LARYR 1578
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 45/287 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + + Q+ + ASA +++ + P + G G EL A+ + +
Sbjct: 912 LGKELTQLGDTDGASAA--YERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNL 969
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV- 503
P EAW R+G+A AL + A+ + S D+ + G V K A+
Sbjct: 970 KPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALA 1029
Query: 504 -----------------------------EDLSAC----VKLDKENKSAYTYLGLALSSI 530
ED ++C + LD +N+S ++
Sbjct: 1030 CYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSILYNQSRVQAAQ 1089
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+++ A A +AI+LD + E W Q +L N A+ LQ I ++++ L
Sbjct: 1090 GDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGIAPESARSWAL 1149
Query: 591 -------RGLLLHGLGQHKKAIKDLSSGSRTMM--PHLIWNLTRWRN 628
RG + L +++A++ + T +L+ L RW +
Sbjct: 1150 LGKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLERWED 1196
>gi|254412945|ref|ZP_05026717.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180109|gb|EDX75101.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 863
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +N AI FD+ ++ P + EA RG R LE AI F +AIQ
Sbjct: 568 NRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAIVSFDKAIQIK 627
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A L E++ KALE +P+S + L+ RG V K K+ + A+
Sbjct: 628 PDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLKLKNLDKALTC 687
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ A+ + L +G++K+A + KA+++ + EA + + +A
Sbjct: 688 FNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEA-----SYNKGIA 742
Query: 566 NS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++A+ + I + F +++RGL + LG+ ++AI ++
Sbjct: 743 LAMSGYLKQAIISFDKATQIKQDFHDNWYIRGLAFYDLGRLEEAITSFEEATK 795
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L +G A G AI+ +D+ L+ P EA RG+A R EA IS +AIQ
Sbjct: 499 LGKGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALRDLGHNKEAIISH-DKAIQ 557
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ +AW RG A L EAI KA++ +P+ + + RG+V + A+
Sbjct: 558 IKSNYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAI 617
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+++ + A+ G AL ++ ++ KA++L + EA +
Sbjct: 618 VSFDKAIQIKPDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLK 677
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L N +KAL C + + I +A++ R ++L LGQ K+AI
Sbjct: 678 LKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAI 719
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 15/294 (5%)
Query: 327 SYSKSSI-SDNKSSDSTESRSKLSF-KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
YSK I S NK+ ++T+ K +F K +L+ A K + + ++ K ++
Sbjct: 460 GYSKEGIISINKTLETTQKLCKSNFGKEYVLENLEGYAYLGKGYALHKLGNLKEAITNYD 519
Query: 385 L-------------SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+RG A + G AI D+ ++ Y +A RG A R L
Sbjct: 520 KGLELKPNNYEAWSNRGSALRDLGHNKEAIISHDKAIQIKSNYYQAWHNRGIALLNLRLL 579
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI F +AIQ P EAW RG L EAI KA++ +P+ + + RG
Sbjct: 580 EEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGD 639
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + ++ ++L ++ A G L + KA KAIQ+ N
Sbjct: 640 ALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLKLKNLDKALTCFNKAIQIQPNLH 699
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AW + + + L ++A+ + L I + +A + +G+ L G K+AI
Sbjct: 700 QAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKGIALAMSGYLKQAI 753
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 10/248 (4%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF + RG+ +N AI FD+ ++ P + EA RG A
Sbjct: 582 AIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGDAL 641
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R L+ +++ F +A++ P + EA RG L +A+ +KA++ +PN
Sbjct: 642 LNLRRLDESLACFDKALELKPDSWEALNNRGTVLLKLKNLDKALTCFNKAIQIQPNLHQA 701
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ R IV K F A+ + +++ A G+AL+ G K+A + KA Q
Sbjct: 702 WNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKGIALAMSGYLKQAIISFDKATQ 761
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-----DKRFSKA--YHLRGLLLHGL 598
+ ++F + W + DL E+A+ ++ I D +SKA Y L+ + +
Sbjct: 762 IKQDFHDNWYIRGLAFYDLGRLEEAITSFEEATKIKPNNADNFYSKACCYALQNKIDLAV 821
Query: 599 GQHKKAIK 606
K+AIK
Sbjct: 822 ESLKQAIK 829
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I G++ AI+ ++ L+ P Y EA +G A A L+ AI F +A Q
Sbjct: 704 NRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKGIALAMSGYLKQAIISFDKATQIK 763
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W RG A LG EAI +A + +PN+AD + + + AVE
Sbjct: 764 QDFHDNWYIRGLAFYDLGRLEEAITSFEEATKIKPNNADNFYSKACCYALQNKIDLAVES 823
Query: 506 LSACVKLDKE 515
L +KL+ E
Sbjct: 824 LKQAIKLNPE 833
>gi|307152887|ref|YP_003888271.1| hypothetical protein Cyan7822_3041 [Cyanothece sp. PCC 7822]
gi|306983115|gb|ADN14996.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 237
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SVD+ + +G+ G Y A+ F++ LK DP +A RG ++ ++ A+ DF
Sbjct: 51 SVDW-VEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQ 109
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+Q P EA+ RG LGE +AI D + AL+F PN A + G+ +
Sbjct: 110 KALQLEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEP 169
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
A +L+ V+LD AY GLA S +G+ +KA KA QL R
Sbjct: 170 VRATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWR 218
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G G +A+++ +KAL+ +PN+ D + RG V KDF A+ED ++
Sbjct: 54 WVEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQ 113
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ + AY G +GEY+KA + A++ + N A ++ Y +L +A
Sbjct: 114 LEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEPVRAT 173
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L + + +D + +AY+ RGL +G +KA D ++
Sbjct: 174 LELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQ 215
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 80/145 (55%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A+ +F +A++ +P+ +A+ RG + L + +A++D KAL+ EP+ + RG
Sbjct: 68 QQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYINRGN 127
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + ++ A+ D +A +K + A+ +GLA ++GE +A KA++LD N+
Sbjct: 128 VYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEPVRATLELTKAVELDPNYG 187
Query: 552 EAWGHLTQFYQDLANSEKALECLQQ 576
EA+ + + D+ + +KA Q+
Sbjct: 188 EAYYNRGLAFSDVGDQQKARSDFQK 212
Score = 46.6 bits (109), Expect = 0.050, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L N++KA++ LD +Y NR F YS L+ + D KALQL+P L++AYI
Sbjct: 70 ALENFNKALK-LDPNNVDAYY-----NRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYI 123
Query: 108 LKGCAFSALGRKEEALS 124
+G + LG ++A++
Sbjct: 124 NRGNVYLELGEYQKAIA 140
>gi|209526966|ref|ZP_03275483.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492568|gb|EDZ92906.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 631
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AL C +Q + ++ + + + +G +L L +H++A+
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAV 492
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ ++Q LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAI 560
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ ++ + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++++ RG LL L ++++AI L
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASL 597
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
>gi|359464391|ref|ZP_09252954.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 654
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ Y +A+S +DQ L D + A RG + R+ + A+ D+ +AI+ NP
Sbjct: 398 RGLAKYGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNP 457
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG ++ L + A+ D +AL +P D L RG +++ F AA+ D
Sbjct: 458 QYAYVYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADY 517
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFYQDL 564
++LD ++ +AY A +G++K KA++LD ++++ L Q+ +
Sbjct: 518 DQAIRLDGKHANAYNGRAHAKGKLGDWKGELADFDKALELDDQLIDSYNGRGLAQY--NR 575
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
N +A++ + L I+ ++ AY RG +
Sbjct: 576 KNYREAIQDYNRALRIEPDYAVAYFNRGFV 605
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N V+ +S+S+++ L G + Y AI+ +D+ + D +A RG A
Sbjct: 347 NNTVSVSPMSQSEAL-----LRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLA 401
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + +AA+SD+ +A+ + A+ RG + AL + A++D ++A+ P A
Sbjct: 402 KYGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAY 461
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ H RG+ + KD A+ D +++D + + G +G+++ A + +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAI 521
Query: 545 QLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+LD A+ G L + +LA+ +KALE +D + +Y+ RGL +
Sbjct: 522 RLDGKHANAYNGRAHAKGKLGDWKGELADFDKALE-------LDDQLIDSYNGRGLAQYN 574
Query: 598 LGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
+++AI+D + R + + R
Sbjct: 575 RKNYREAIQDYNRALRIEPDYAVAYFNR 602
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ N A+S +DQ L+ DP + L RG + AA++D+ +AI+ +
Sbjct: 465 NRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIRLD 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A+ LG+ + D KALE + D + RG+ + K++ A++D
Sbjct: 525 GKHANAYNGRAHAKGKLGDWKGELADFDKALELDDQLIDSYNGRGLAQYNRKNYREAIQD 584
Query: 506 LSACVKLDKENKSAYTYLGL 525
+ ++++ + AY G
Sbjct: 585 YNRALRIEPDYAVAYFNRGF 604
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D RG+AQ N Y AI +++ L+ +P Y A RG + Q ++E A +DF +
Sbjct: 562 IDSYNGRGLAQYNRKNYREAIQDYNRALRIEPDYAVAYFNRGFVKEVQNDVEGAKADFQK 621
Query: 441 A 441
A
Sbjct: 622 A 622
>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 467
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 34/254 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA N G Y SAI+ +D+ +K P + +A RG A EAA+ + ++++
Sbjct: 82 SRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDKSLEIE 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHER--------- 489
P ++W RG + L +AI KA+EF P N A+ILH +
Sbjct: 142 PDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALES 201
Query: 490 ------------------GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
G + K AV + +K+ + A+ G AL ++G
Sbjct: 202 YERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAWYNRGNALDALG 261
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A E++ +A+++ N EAW + + E+A+ Q + +D +F+KA+ R
Sbjct: 262 RYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSR 321
Query: 592 GLLLHGLGQHKKAI 605
G LG + +AI
Sbjct: 322 GTAFRKLGMYAEAI 335
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A +Y A+ F+Q + YPEAL RG A ++AI+ + +AI+ P
Sbjct: 49 KGMALCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRP 108
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW RG A LG A++ K+LE EP+ + + RGI K + ++ A+
Sbjct: 109 TFHQAWFNRGNALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASY 168
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ +A+ L Y +A E++ + + + ++ AW +L L
Sbjct: 169 DKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGR 228
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+ + L I +F A++ RG L LG++ +AI+
Sbjct: 229 HEEAVASYNRALKIVPKFYGAWYNRGNALDALGRYDEAIE 268
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 9/260 (3%)
Query: 380 SVDFRLSRGIAQVN-------EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++FR A N + +Y+ A+ ++++L P + A G E
Sbjct: 171 AIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHE 230
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++ + A++ P AW RG A ALG EAI+ +ALE +PN + + G
Sbjct: 231 EAVASYNRALKIVPKFYGAWYNRGNALDALGRYDEAIESYRRALEIKPNLREAWYNWGST 290
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+K + A+ ++LD + A++ G A +G Y +A ++ KA+Q + E
Sbjct: 291 LYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDLYE 350
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
AW L ++E A+ + I+ F A++ RG+ L LG + AI
Sbjct: 351 AWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQAL 410
Query: 613 RTMMPHLIWNLTRWRNLCFN 632
+ + P+ ++R RNL N
Sbjct: 411 Q-INPNFPEAVSR-RNLALN 428
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEG-KYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+S+ +F L +GI Q++ G Y AI F++ L+ P + E +G A +
Sbjct: 1 MSRKPDSEAEFYLHQGI-QLSHGCAYEDAIMSFERALQSSPTWHEPWYFKGMALCELQRY 59
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F +AI EA RG A LG AI KA++ P RG
Sbjct: 60 EEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGN 119
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + AA+E ++++ + ++ G+ LS + Y A ++ KAI+ ++
Sbjct: 120 ALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYS 179
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW + +ALE ++VL I + A++ G +LH LG+H++A+
Sbjct: 180 NAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAV 233
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
KS I D+ S RGI +Y AI+ +D+ ++ P Y A R Q+
Sbjct: 136 KSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRY 195
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + P AW G LG EA+ ++AL+ P + RG
Sbjct: 196 SEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAWYNRGN 255
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ A+E +++ + A+ G L Y++A ++ +AI+LD F
Sbjct: 256 ALDALGRYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFA 315
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AW ++ L +A+ + + +A++ RG+ L LG ++ A+
Sbjct: 316 KAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDLYEAWYGRGIALGHLGHNEAAV 369
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ A++ +++ LK P + A RG A + AI + A++ P+ EAW
Sbjct: 227 GRHEEAVASYNRALKIVPKFYGAWYNRGNALDALGRYDEAIESYRRALEIKPNLREAWYN 286
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G EAI +A+ +P A RG K + A+ V+
Sbjct: 287 WGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAFRKLGMYAEAIISYDKAVQHQP 346
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL +G + A ++ A+ ++ +F AW L + + A+
Sbjct: 347 DLYEAWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSY 406
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ 600
Q L I+ F +A R L L+ Q
Sbjct: 407 DQALQINPNFPEAVSRRNLALNYTSQ 432
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 162/416 (38%), Gaps = 59/416 (14%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
LC L+ + +A++ + + + + N R L + I DKA++L PT Q
Sbjct: 53 LCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQ 112
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
A+ +G A LG E AL ++K LE+E + + +R +T
Sbjct: 113 AWFNRGNALDKLGCYEAALESYDKS--------------LEIEPDYSKSWYNRGIT---- 154
Query: 165 VSNSMSSLTVSESGLNANDKMSETSEN-----HNKSDICDSSSQSRDVSETCSKS-SHDP 218
+S L + + + DK E + +N+++I + + E+ + S P
Sbjct: 155 ----LSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKP 210
Query: 219 D-------LCN-----GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDG----SK 262
D L N GR +EA V L I K N + D +
Sbjct: 211 DWHGAWYNLGNILHKLGRHEEA-----VASYNRALKIVPKFYGAWYNRGNALDALGRYDE 265
Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
+ + R A EI + + + KAS E + + K + +S +
Sbjct: 266 AIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAF 325
Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
Y+++ IS +K + + + L W N+ V + +I+ D
Sbjct: 326 RKLGMYAEAIISYDK---AVQHQPDLYEAWYGRGIALGHLGHNEA-AVASYDHAVAINPD 381
Query: 383 FR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--QRELEA 433
F SRG+A + G Y +AI+ +DQ L+ +P +PEA+ R A + Q EL A
Sbjct: 382 FYPAWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRRNLALNYTSQPELSA 437
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + G +A++ +D + +P + A RG A + +AAI+ + +A+Q NP
Sbjct: 355 RGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQALQINP 414
Query: 447 SAGEAWKRRGQARAALGE---SVEAIQDLSKALEFEPNSADI 485
+ EA RR A + S + D LE P+S+DI
Sbjct: 415 NFPEAVSRRNLALNYTSQPELSADREDDPQNELELLPDSSDI 456
>gi|445062671|ref|ZP_21375019.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
30599]
gi|444505943|gb|ELV06357.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
30599]
Length = 324
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 116/221 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI + G +A+ FD+ ++ + EA R +A ++ + +I D+ +AI+
Sbjct: 81 YNRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEV 140
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A+ R ++ ALGE EAI+D KA+E+ + D + RG V K ++N A++
Sbjct: 141 YPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAID 200
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + +++E Y A I +YK A E + I++ N+L+A+ + +
Sbjct: 201 DYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNRGIIAMTM 260
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A++ +V+ +D + AY+ + + L+ LG + +AI
Sbjct: 261 EAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDEAI 301
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SA+ + LK + + A RG E A+ DF +AI+ N + EA+
Sbjct: 55 NENSYKSAVEDYTWALKLNDKFAAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G Y +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ I + KAY RG++ + +++AIKD
Sbjct: 235 DFDELIKIAPNYLKAYLNRGIIAMTMEAYQEAIKDF 270
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +++ ++ P + +A R ++ E + AI D+ +AI+ N +A+ RG
Sbjct: 127 YKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRG 186
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ LG EAI D + A+ AD R F KD+ AVED +K+
Sbjct: 187 NVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNY 246
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+ ++ Y++A + K I+LD N +A+ + L ++A+ Q
Sbjct: 247 LKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDEAILYYDQ 306
Query: 577 VLYIDKRFSKAYHLRG 592
+ ++ +S++Y RG
Sbjct: 307 AIKLNPDYSESYFNRG 322
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 37/229 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGES---VEAIQDLSKALEFEPNSADILHERG 490
AI F+E I+ + + EA+ R A+A + A++D + AL+ A + RG
Sbjct: 25 AIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAVEDYTWALKLNDKFAAAYYNRG 84
Query: 491 IVN----------------------------------FKFKDFNAAVEDLSACVKLDKEN 516
I+N KD+ ++ED + +++
Sbjct: 85 IINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHF 144
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY L+ +++GEYK+A + + KAI+ + +F++A+ + + L N +A++
Sbjct: 145 ADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAIDDYTN 204
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
++I++ F+ Y R + +K A++D + +L L R
Sbjct: 205 AIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNR 253
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
FK K++N A+E S +KLD AY A ++I YK A E + A++L+ F
Sbjct: 17 FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAVEDYTWALKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L N+E AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GSRTMMPHL 619
+ PH
Sbjct: 137 AIE-VYPHF 144
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 49 LRNWSKAIRILDSLL--AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++++ A+ D L+ A +Y ++ NR +E ++ I+D DK ++LDP + AY
Sbjct: 226 IKDYKGAVEDFDELIKIAPNY-LKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAY 284
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
K A + LG +EA+ +++
Sbjct: 285 YNKAVALNHLGIYDEAILYYDQA 307
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
SL N A++ D + +Y +++ RA + L+ +K I D +KA+++ P AY
Sbjct: 89 SLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAY 148
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALH 135
+ + +ALG +EA+ ++K E+ H
Sbjct: 149 YNRALSKNALGEYKEAIKDYDKAIEYNSH 177
>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
Length = 298
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ + Y AI+ + Q + +P Y +A RG A E + AI+D+T+ I
Sbjct: 46 FNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIAL 105
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW+ RG A G+ +A+ D ++ + EP +A+ + RGI D++ A+
Sbjct: 106 APQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAIT 165
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + L + +AY G+A + G+Y KA + + +AI L+ A+ + Y
Sbjct: 166 DYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMK 225
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ +KA+ +D ++ AY+ + L G+
Sbjct: 226 GDYDKAITDYSLATTLDPDYAVAYYNQALACEKAGR 261
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+++ AI+ +++AI NP +A+ RG A GE AI D ++ + P + D
Sbjct: 55 RQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWR 114
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG V + D++ AV D + + L+ +N A+ G+A S G+Y A + +AI L
Sbjct: 115 SRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQ 174
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + Y++ + +KA++ Q + ++ R + AY+ R G + KAI D
Sbjct: 175 PKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITD 234
Query: 608 LS 609
S
Sbjct: 235 YS 236
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A N G+Y +AI+ + Q++ P +A RG A + + + A++D+T+
Sbjct: 76 ADAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQ 135
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P EA RG A + G+ AI D ++A+ +P A + RGI D++
Sbjct: 136 FIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYD 195
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A++D S + L+ + SAY A G+Y KA + A LD ++ A+
Sbjct: 196 KAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITDYSLATTLDPDYAVAY 249
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P + + +G+ +D+N A+ S + L+ + AY G A + GEY A
Sbjct: 38 KPGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIA 97
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ + I L ++AW Y + + +KA+ Q + ++ + ++A++ RG+
Sbjct: 98 DYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDK 157
Query: 599 GQHKKAIKDLS 609
G + AI D +
Sbjct: 158 GDYDTAITDYT 168
>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 365 NKKFCVTRIS------KSKSISVDFRLSRGIAQVNEG-------KYASAISIFDQILKED 411
NK + +T + KS ++ S N G KY AI +D+ L+ +
Sbjct: 153 NKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEIN 212
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P + A GRG+A ++ A+ + +A++ +P AW RG + AALG+ +EA++
Sbjct: 213 PKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKS 272
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ALE +P +G + ++ A+E + +D + A + IG
Sbjct: 273 YDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIMLEIG 332
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y +A E+ KA+++D +++ AW + + L N ++AL+C ++ L +D F A R
Sbjct: 333 KYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKALKLDPNFEDALKAR 392
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 112/238 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++ + +G+ Y ++ +D+ L+ DP Y +G
Sbjct: 34 CYNKILQTDLYYTNAWYGKGVVLGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKL 93
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A++ +P+ W +G A LGE +EA++ +ALE +PN +
Sbjct: 94 EKYREALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFN 153
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + +++ AV+ + +D + + + G L+ + +Y +A E++ KA++++
Sbjct: 154 KGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEINP 213
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
F AW +L +A+E + L ID + A+ RG L LG++ +A+K
Sbjct: 214 KFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVK 271
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F VT K S+ + + +GKY A+ +++IL+ D Y A G+G
Sbjct: 2 FIVTVFDSFKKNSL---IKKAYNLTEQGKYQEALGCYNKILQTDLYYTNAWYGKGVVLGK 58
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + +A++ +P+ W +G L + EA++ KALE +PN +
Sbjct: 59 LENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWF 118
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + ++ A+E ++LD + G AL+ +GEY +A +++ A+ +D
Sbjct: 119 NKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGID 178
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ W + L +A+E + L I+ +F+ A+ RG L L +H +A++
Sbjct: 179 PSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVE 237
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G V KY A+ +D+ L+ DP Y +G A E A+ + EA++ +
Sbjct: 85 NKGYTFVKLEKYREALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELD 144
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ W +G A LGE EA++ AL +P+ A + RG + K K + A+E
Sbjct: 145 PNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIES 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+T G AL+ + ++ +A E++ KA+++D + AW + L
Sbjct: 205 YDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALG 264
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+A++ + L ID + +G L LG++ A++
Sbjct: 265 KYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALE 305
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A G+Y A+ +D+ L+ DP Y +G A E A+ + A+
Sbjct: 118 FNKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGI 177
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS W RG L + VEAI+ KALE P RG + K AVE
Sbjct: 178 DPSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVE 237
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D ++ A+ G +L+++G+Y +A +++ +A+++D W +L
Sbjct: 238 SYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAEL 297
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
ALE + L ID S A + + ++ +G++ +A++
Sbjct: 298 GKYSDALESYDKALAIDPIDSIALYNKANIMLEIGKYPEALE 339
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A G+Y+ A+ +D L DP RG ++ AI + +A++
Sbjct: 152 FNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEI 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP AW RG A L + +EA++ KALE +P RG + AV+
Sbjct: 212 NPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVK 271
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D + + G AL+ +G+Y A E++ KA+ +D A + ++
Sbjct: 272 SYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIMLEI 331
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ALE + L ID + A++ +G L +++A+K
Sbjct: 332 GKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALK 373
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L N+ +++ D L ++ N+ + + +LE ++ + DKAL+LDP
Sbjct: 56 LGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFG 115
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
+ KG A + LG EAL +++ E
Sbjct: 116 VWFNKGYALTELGEYLEALECYDEALE 142
>gi|428311393|ref|YP_007122370.1| hypothetical protein Mic7113_3225 [Microcoleus sp. PCC 7113]
gi|428253005|gb|AFZ18964.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 496
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 111/224 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ + + G Y AI F+Q L+ + + E RG +R + + AI+D+++ ++
Sbjct: 68 FKQGLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYSQVLRV 127
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EA+ RG RA L + A+QD ++AL+ + R + + D+ A+
Sbjct: 128 NPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADYQEAIA 187
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + ++ AY Y G+A + +Y A E + +A+ ++ N E + + L
Sbjct: 188 DCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGLNRIGL 247
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++A+ Q L ++ +++AY RG LG + +++D
Sbjct: 248 GDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSLEDF 291
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ +G Y AI+ + Q+L+ +P EA RG RA + A+ D+ +A+Q +
Sbjct: 104 RGMSRYKKGDYLGAINDYSQVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDA 163
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R R L + EAI D + AL PN RG+ +F+ +D+ A+ED
Sbjct: 164 KHIKTYLNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDY 223
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ Y GL +G+Y++A +A++L+ N+ +A+ + L +
Sbjct: 224 NQALNINPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGD 283
Query: 567 SEKALECLQQVLYIDKRFSKAY 588
+ +LE Q L++D +KA+
Sbjct: 284 NWGSLEDFDQALHLDPVSAKAF 305
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 10/235 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+R +V Y AI+ + L +P P+A + RG A + A+ D+ +A+
Sbjct: 170 LNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNI 229
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ E + RG R LG+ EAI D ++AL+ PN RG + D ++E
Sbjct: 230 NPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSLE 289
Query: 505 DLSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + LD + K+ ++ + A S E E+ + + IQ L G+L D
Sbjct: 290 DFDQALHLDPVSAKAFFSQMAPAFSQ--ELGIVEDENQQLIQ----GLMLQGNLR---YD 340
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ AL QVL +D +++AY+ R + L ++ A++DL + + H
Sbjct: 341 SGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLETAKNLSLSH 395
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 41/270 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A Y +A+ ++Q L +P E RG R + + AI+DF +A++
Sbjct: 204 LYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKL 263
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---------HERGIV--- 492
NP+ +A+ RG R LG++ +++D +AL +P SA E GIV
Sbjct: 264 NPNYTQAYLNRGYTRLQLGDNWGSLEDFDQALHLDPVSAKAFFSQMAPAFSQELGIVEDE 323
Query: 493 ------------NFKFK--DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
N ++ D++AA+ + + LD AY S++ +Y+ A E
Sbjct: 324 NQQLIQGLMLQGNLRYDSGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALE 383
Query: 539 ----------AHLKAIQLDRNFLEAWGHLTQFYQ-----DLANSEKALECLQQVLYIDKR 583
+H ++Q ++Q + + + A+ QVL ++
Sbjct: 384 DLETAKNLSLSHQPSLQPPPVVPVGQTAKDYYHQGVEKLQIGDFQGAIADFNQVLQMNGN 443
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ RG +G +KAI+DL + ++
Sbjct: 444 DATTLTCRGFAYSRVGDKEKAIEDLQTAAK 473
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A E++K+ G + G+ AIQD ++AL F + A++ + RG+ +K D+ A+ D S
Sbjct: 64 ASESFKQ-GLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYS 122
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ N AY+ G + + + A + + +A+Q+D ++ + + +LA+
Sbjct: 123 QVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADY 182
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ L I+ KAY RG+ L + A++D
Sbjct: 183 QEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMED 222
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA----- 441
+G + + G Y +A++ F+Q+L DP Y EA R T R+ R+ E A+ D A
Sbjct: 334 QGNLRYDSGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLETAKNLSL 393
Query: 442 -----IQSNP--SAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+Q P G+ K +G + +G+ AI D ++ L+ N A L RG
Sbjct: 394 SHQPSLQPPPVVPVGQTAKDYYHQGVEKLQIGDFQGAIADFNQVLQMNGNDATTLTCRGF 453
Query: 492 VNFKFKDFNAAVEDLSACVKLDKE 515
+ D A+EDL KL E
Sbjct: 454 AYSRVGDKEKAIEDLQTAAKLFHE 477
>gi|328542500|ref|YP_004302609.1| O-linked GlcNAc transferase [Polymorphum gilvum SL003B-26A1]
gi|326412247|gb|ADZ69310.1| Probable O-linked GlcNAc transferase protein [Polymorphum gilvum
SL003B-26A1]
Length = 273
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + G+ +AI+ +D+ L+ P Y AL+GRG + A+ DF I+ N
Sbjct: 96 NRALVERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRN 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A+ RG A G AI+D + A+ PN+A+ RGI D NAA+ D
Sbjct: 156 SSDARAFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
LS V LDK + SA+ G+AL +G+ A+ + +AI LD
Sbjct: 216 LSDAVNLDKNSASAWANRGIALEMLGKKNDAQRNYNRAIGLD 257
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P +A RG A L+ A+ DF A++ +PS+ +A+ R
Sbjct: 43 IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ AI D +AL +P+ L RG + + A+ D ++ + + A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G + A E AI L+ N E + Y + + AL L + +
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSDLSDAVNL 222
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKD 607
DK + A+ RG+ L LG+ A ++
Sbjct: 223 DKNSASAWANRGIALEMLGKKNDAQRN 249
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+YA A+ FD +++ + A RG Q AI DF AI
Sbjct: 129 VGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAFHNRGLIYQAQGLHAFAIEDFATAIGL 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A E + RG + A+ + A+ DLS A+ + NSA RGI N A
Sbjct: 189 NPNAAEPYIARGISYLAINDPNAALSDLSDAVNLDKNSASAWANRGIALEMLGKKNDAQR 248
Query: 505 DLSACVKLDKENKSA 519
+ + + LD N A
Sbjct: 249 NYNRAIGLDGSNVVA 263
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L+ + P A + RGI + + A+ED + ++LD + AY L
Sbjct: 43 IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G+ + A + +A+++ ++ A Y+ L +AL V+ + ++A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
H RGL+ G H AI+D ++
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFAT 184
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+A I+ T I +NP+ +A+ RG A G +A++D + AL +P+S R +
Sbjct: 40 DANIASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRAL 99
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + A+ D +++ + A G +G+Y +A I+ + +
Sbjct: 100 VERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDA 159
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + YQ A+E + ++ ++ Y RG+ + A+ DLS
Sbjct: 160 RAFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSDLS 217
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQ-SYEIQ 70
R + I + D +RV A+ R + L +++A+R D+++ + S + +
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYR--QLGQYAQALRDFDTVIRRNSSDAR 160
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR Y LH I D A+ L+P + YI +G ++ A+ ALS
Sbjct: 161 AFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALS 214
>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
Length = 428
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 10/212 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ N+ YA AI+ +DQ +K DP A GRGT + + A++D+ EAI+ +P
Sbjct: 187 RGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG + A G++ AI + SKA+E +P A+ RGI + D+ A++D
Sbjct: 247 NYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDD 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK-----AIQLDRNFLEAWGHLTQFY 561
VKLD +N Y AL++ G +A+EA A D F+ W Y
Sbjct: 307 DQAVKLDPDNPERYNNRCYALATAG---RAQEALADCNIALARSPDAAFM--WDSRGYAY 361
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
L +++E L ++ ++A + RG+
Sbjct: 362 LRLGQYRRSIEDYDAALRLNPTHAQALYGRGV 393
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EGKYA A+ F + ++ DP +A RG + + AI+DF AI +P+ ++
Sbjct: 126 EGKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFS 185
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + + AI D +A++ +P + RG V D + A+ D ++LD
Sbjct: 186 DRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLD 245
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G++ + G+ +A + KAI+LD F A+G+ Y D + E A++
Sbjct: 246 PNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQD 305
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Q + +D + Y+ R L G+ ++A+ D
Sbjct: 306 DDQAVKLDPDNPERYNNRCYALATAGRAQEALAD 339
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 364 RNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
R K+ + S+++ D ++ RG + Y AI+ F + + DP +
Sbjct: 125 REGKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSF 184
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG + +++ AI+D+ +AI+ +P A+ RG ALG+ A+ D +A+
Sbjct: 185 SDRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRL 244
Query: 479 EPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PN A+ RG V+FK K D + A+ + S ++LD + +A+ G+A G+Y+ A
Sbjct: 245 DPNYAEAYGNRG-VSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAI 303
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL---RGLL 594
+ +A++LD + E + + LA + +A E L R A + RG
Sbjct: 304 QDDDQAVKLDPDNPERYNNRCYA---LATAGRAQEALADCNIALARSPDAAFMWDSRGYA 360
Query: 595 LHGLGQHKKAIKDLSSGSRTMMPH 618
LGQ++++I+D + R H
Sbjct: 361 YLRLGQYRRSIEDYDAALRLNPTH 384
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 302 NGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNE 361
NG V++ L D +L D Y ++ D +++ +R +SFK
Sbjct: 219 NGRGTVYNALGDDDRALAD-------YDEAIRLDPNYAEAYGNRG-VSFK---------- 260
Query: 362 AKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPE 416
AK + + + SK+I +D + + RGIA ++G Y AI DQ +K DP PE
Sbjct: 261 AKGDNDRAI--LEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPE 318
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
R A A + A++D A+ +P A W RG A LG+ +I+D AL
Sbjct: 319 RYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAAL 378
Query: 477 EFEPNSADILHERGIVNFKFKD 498
P A L+ RG+ K D
Sbjct: 379 RLNPTHAQALYGRGVAKLKNGD 400
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ +G AI + + ++ DP + A RG A + + E AI D +A++ +
Sbjct: 254 NRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLD 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A A G + EA+ D + AL P++A + RG + + ++ED
Sbjct: 314 PDNPERYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIED 373
Query: 506 LSACVKLDKENKSAYTYLGLA 526
A ++L+ + A G+A
Sbjct: 374 YDAALRLNPTHAQALYGRGVA 394
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
L + + + DE +R+D A A R K ++ +SKAI LD A ++
Sbjct: 228 LGDDDRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIE-LDPKFANAF 286
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR Y ++H I+D D+A++LDP + Y + A + GR +EAL+
Sbjct: 287 -----GNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALATAGRAQEALA 338
>gi|193215483|ref|YP_001996682.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088960|gb|ACF14235.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 320
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+RG A++ G Y A++ F +++ D PE RGT A+ D +
Sbjct: 65 IDAYLARGGAKLALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALDDLVQ 124
Query: 441 AIQSNPSAG---EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
I+ +P G A+ R G AI DL + ++ +P + D + RG N+ K
Sbjct: 125 GIRLDPQTGLTELAYSSRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAK 184
Query: 498 DFNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++ AV+D S ++L+ N+ AY + G A G Y+ A E +AI+L + A+
Sbjct: 185 NYDVAVKDFSKAIQLNLPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAY 244
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +L N + L+ + L +D + + AY G L Q KKA++ + +R
Sbjct: 245 TNRGIAQIELGNYDDGLQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAVEQIKQAAR 303
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR + + + G YA+AI+ +++K DP P+A RG+A + + A+ DF++AIQ N
Sbjct: 141 SRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDVAVKDFSKAIQLN 200
Query: 446 PSAGEAWKRR---GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+A+ G A+ G A++ S+A+E + + A RGI + +++
Sbjct: 201 LPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAYTNRGIAQIELGNYDDG 260
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++D+ A ++LD +N AY Y G A S + + KKA E +A +L+
Sbjct: 261 LQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAVEQIKQAARLE 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 31/234 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++ +++ +E +Y +I + ++ P A R +A + AAI+D+++ IQ
Sbjct: 1 MTQHLSKADEAEYRLSIEFATKAIELAPTCEPAFFSRASAHFMLGDYSAAIADYSQTIQL 60
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + +A+ RG A+ ALG A+ D S+ + + + + + RG N+ +++ A++
Sbjct: 61 NEAHIDAYLARGGAKLALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALD 120
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL ++LD + + T L + S+ EY D
Sbjct: 121 DLVQGIRLDPQ--TGLTELAYSSRSMIEY-----------------------------DH 149
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
N A+ L +V+ +D + AY+ RG + + A+KD S + +P+
Sbjct: 150 GNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDVAVKDFSKAIQLNLPN 203
>gi|427730743|ref|YP_007076980.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
gi|427366662|gb|AFY49383.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
Length = 521
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
++ +AIS +DQ LK P EA RG A R R E AIS + ++++ NP +AW
Sbjct: 239 EFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRN-EEAISSYDQSVKFNPDDHQAWNN 297
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG + EAI +A++ +P+ + + RGI A+ +K
Sbjct: 298 RGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYDQALKFQP 357
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL ++G ++A ++ +A++ +F EAW + ++L +E+A+
Sbjct: 358 DLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSY 417
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q L F +A++ RG+ L L ++++AI
Sbjct: 418 DQALKFQPDFHEAWNNRGVALFNLERNEEAI 448
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AIS +DQ +K +P +A RG E AIS + +A++
Sbjct: 263 NRGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNNRGNTLFNLGRNEEAISSYDQAVKIK 322
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A LG + EAI +AL+F+P+ + RGI F A+
Sbjct: 323 PDKHETWNNRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISS 382
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G AL ++G ++A ++ +A++ +F EAW + +L
Sbjct: 383 YDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLE 442
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+E+A+ Q L +A++ + +KAI++L
Sbjct: 443 RNEEAISSYDQALKFQPDLHQAWYNKACCYALQNNVEKAIENL 485
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E EAAIS + +A++ P EAW RG A LG + EAI ++++F P+ +
Sbjct: 238 KEFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNN 297
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG F A+ VK+ + + G+AL ++G ++A ++ +A++
Sbjct: 298 RGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYDQALKFQP 357
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +AW + +L +E+A+ Q L F +A++ RG L LG++++AI
Sbjct: 358 DLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSY 417
Query: 609 SSGSRTMMP--HLIWN 622
+ P H WN
Sbjct: 418 DQALK-FQPDFHEAWN 432
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AIS +DQ LK P +A RG A E AIS + +A++
Sbjct: 331 NRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQ 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG + EAI +AL+F+P+ + + RG+ F + A+
Sbjct: 391 PDFHEAWYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLERNEEAISS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ + +KA E AI L+ W + +
Sbjct: 451 YDQALKFQPDLHQAWYNKACCYALQNNVEKAIENLQIAINLNPEQCRTWAKTDSDFDSIR 510
Query: 566 NSEKALECLQQ 576
N E E +++
Sbjct: 511 NDELFQELMEK 521
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 464 ESVEAIQDL-SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
E V QDL ++ + E +L E G + + K+F AA+ +K + A+
Sbjct: 204 EKVLEFQDLLAEQHQTEDRKVGLLFELGNLLYAAKEFEAAISSYDQALKFKPDKHEAWYN 263
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G+AL ++G ++A ++ ++++ + + +AW + +L +E+A+ Q + I
Sbjct: 264 RGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNNRGNTLFNLGRNEEAISSYDQAVKIKP 323
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
+ ++ RG+ L LG++++AI + P H WN
Sbjct: 324 DKHETWNNRGIALRNLGRNEEAISSYDQALK-FQPDLHQAWN 364
>gi|429123131|ref|ZP_19183664.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
gi|426280944|gb|EKV57947.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
Length = 392
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 115/221 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI + G A+ FD+ ++ + EA R +A ++ + +I D+ +AI+
Sbjct: 81 YNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEV 140
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A+ R ++ ALGE EAI+D KA+E+ + D + RG V K ++N A++
Sbjct: 141 YPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAYNNRGNVKEKLGNYNEAID 200
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + +++E Y A I +YK A E + I++D N+ +A+ + +
Sbjct: 201 DYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIDPNYSKAYLNRGIIAITM 260
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A++ +V+ +D + AY+ + + L+ LG + ++I
Sbjct: 261 EAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDESI 301
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SAI + LK + + A RG E A+ DF +AI+ N + EA+
Sbjct: 55 NENSYKSAIEDYTWALKLNDKFAAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G Y +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFTDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ ID +SKAY RG++ + +++AIKD
Sbjct: 235 DFDELIKIDPNYSKAYLNRGIIAITMEAYQEAIKDF 270
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +++ ++ P + +A R ++ E + AI D+ +AI+ N +A+ RG
Sbjct: 127 YKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAYNNRG 186
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ LG EAI D + A+ AD R F KD+ AVED +K+D
Sbjct: 187 NVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIDPNY 246
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+ ++ Y++A + K I+LD N +A+ + L ++++ Q
Sbjct: 247 SKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDESILYYDQ 306
Query: 577 VLYIDKRFSKAYHLRGL 593
+ ++ +S++Y RG+
Sbjct: 307 AIKLNPDYSESYFNRGI 323
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEAAISDFTEAIQSNPSAGEAWK 453
Y AI F +++K D EA R A+A + ++AI D+T A++ N A+
Sbjct: 22 YNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAIEDYTWALKLNDKFAAAYY 81
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG +LG + +A++D KA+E N + + R KD+ ++ED + +++
Sbjct: 82 NRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVY 141
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY L+ +++GEYK+A + + KAI+ +
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNS------------------------- 176
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
F+ AY+ RG + LG + +AI D ++
Sbjct: 177 ---------HFTDAYNNRGNVKEKLGNYNEAIDDYTNA 205
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
FK K++N A+E S +KLD AY A ++I YK A E + A++L+ F
Sbjct: 17 FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAIEDYTWALKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L N+E AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GSRTMMPHL 619
+ PH
Sbjct: 137 AIE-VYPHF 144
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L+++ KAI L+ L ++Y + RA + L+ +K I D +KA+++ P AY
Sbjct: 96 ALKDFDKAIE-LNYNLEEAYYV-----RANTKASLKDYKGSIEDYNKAIEVYPHFADAYY 149
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALH 135
+ + +ALG +EA+ ++K E+ H
Sbjct: 150 NRALSKNALGEYKEAIKDYDKAIEYNSH 177
>gi|220906220|ref|YP_002481531.1| hypothetical protein Cyan7425_0783 [Cyanothece sp. PCC 7425]
gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 542
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 366 KKFCVTRISK-SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
K F V + S + D + IA+ + Y AI+ FD+ ++ +P A RG A
Sbjct: 237 KGFPVPVAAPLSNQPTTDNFFLQAIAKYRQQDYRGAIADFDRAIRLNPQLDLAYSNRGLA 296
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R ++ A++DF AI+ NP A+ RG AR L + A D +A+ P AD
Sbjct: 297 RYGLQDYRGAVADFDRAIRLNPQLDLAYYNRGLARYGLQDYRGARADFDQAIRLNPKDAD 356
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG V + +D+ AV D ++L+ + AY G+ + +Y A +AI
Sbjct: 357 AYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAI 416
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ +A+ + L + AL Q + ++ + Y+ RG + +GL ++ A
Sbjct: 417 RLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQDYRGA 476
Query: 605 IKDLSSGSRTMMPHL 619
I D R + P L
Sbjct: 477 IADFDQAIR-LQPDL 490
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ FD+ ++ +P + A RG R ++ A++DF +AI+ NP +A+ RG
Sbjct: 371 YRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRG 430
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
R L + A+ D +A+ P ADI + RG V + +D+ A+ D ++L +
Sbjct: 431 FVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDL 490
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
AY + GLA + E + A + +A +L +A G+ Q YQ
Sbjct: 491 ALAYYHRGLARAQAEERRAALPDYQRAAEL----AQAQGN-DQVYQ 531
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ Y A++ FD+ ++ +P A RG AR ++ A +DF +AI+ N
Sbjct: 292 NRGLARYGLQDYRGAVADFDRAIRLNPQLDLAYYNRGLARYGLQDYRGARADFDQAIRLN 351
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG R L + A+ D +A+ P + RGI K +D+ A+ D
Sbjct: 352 PKDADAYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALAD 411
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + AY G + +Y A +AI+L+ + + + L
Sbjct: 412 FDQAIRLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQ 471
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ Q + + + AY+ RGL + + A+ D
Sbjct: 472 DYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPD 513
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + Y A++ FDQ ++ +P +A RG R ++ A++DF +AI+ N
Sbjct: 394 NRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLN 453
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG R L + AI D +A+ +P+ A + RG+ + ++ AA+ D
Sbjct: 454 PEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPD 513
Query: 506 LSACVKL 512
+L
Sbjct: 514 YQRAAEL 520
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
+R +L + + D+ +R++ A A R + L+++ A+ D + + E
Sbjct: 398 TRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVR--YGLQDYGGALADFDQAIRLNPE 455
Query: 69 IQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
DI N R F L+ ++ I D D+A++L P L AY +G A + + AL ++
Sbjct: 456 DADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPDYQ 515
Query: 128 KGYEHALHQSADLKQFLELEEL 149
+ E A Q D L + +L
Sbjct: 516 RAAELAQAQGNDQVYQLAIMQL 537
>gi|434388094|ref|YP_007098705.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428019084|gb|AFY95178.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 779
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P + + RGTA+A + AI+D++ AI NP A+ RG R LG+
Sbjct: 379 LLPNPTDALSYVMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDG 438
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ D S LE +P+SA + R I+ + +F +AV D +++ E S Y LG
Sbjct: 439 ALADFSAVLEIDPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNY 498
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+GE A + +A++LD F A+ + Y+ + +AL + + +D
Sbjct: 499 CQMGELALAIANYTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIG 558
Query: 588 YHLRGLLLHGLGQHKKAIKDLS 609
Y+ RG+ +G H+ AI D +
Sbjct: 559 YYNRGICHRQIGNHQAAIADYT 580
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G A++ +D+ + DP RG +AAI+D+T+ + N A+
Sbjct: 535 QGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYY 594
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG AR +G+ AI D ++ + F+PN + R IV + D A+EDL + +
Sbjct: 595 HRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAIS 654
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G LS +++ A + +AI L ++L+A+ + Y L + A+
Sbjct: 655 PTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIAD 714
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ID +++ AY+ RG + +G AI D
Sbjct: 715 FSHSISIDPKYAPAYYQRGKIYTQIGDITGAIAD 748
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I G++ SA++ + + L+ P G EL AI+++T+A++ +
Sbjct: 459 NRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIANYTQALELD 518
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R G+ EA+ D +A+ +PN + RGI + + + AA+ D
Sbjct: 519 PEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIAD 578
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + AY + G A +G+ A + + I D N L A + +L
Sbjct: 579 YTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELH 638
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + A+E L++ + I F++AY+ RG +L H+ A+ D
Sbjct: 639 DVQGAIEDLERAIAISPTFAQAYYQRGWVLSRNDDHQFALAD 680
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I++D L +RGI G + +AI+ + Q L + Y A RG AR + +
Sbjct: 547 RAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDK 606
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI+D+T+ I +P+ A R R+ L + AI+DL +A+ P A ++RG
Sbjct: 607 HGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAISPTFAQAYYQRGW 666
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + D A+ D + L + AY Y G + S+G+ A +I +D +
Sbjct: 667 VLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIADFSHSISIDPKYA 726
Query: 552 EAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
A+ + Y + + A+ Q LY+D+ SK Y
Sbjct: 727 PAYYQRGKIYTQIGDITGAIADYHQAANLYLDRGDSKTYQ 766
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 41/274 (14%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T I++ + VD RG G A+S +D+ + DP +A GRG AR + +
Sbjct: 275 TEIARHVQLLVD----RGTEFYEVGNCQQALSAYDRAISLDPQCVDAYCGRGNARRYMGD 330
Query: 431 LEAAISDFTEAIQSNPSAGEA-------------------------------------WK 453
+ DF+ A++ +P G A +
Sbjct: 331 YPGSWEDFSTAVELDPDRGIAYIGRALAACFKPQSDYRPNDDFERGKNLLPNPTDALSYV 390
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A+A L + AI D S A+ P + RG + D + A+ D SA +++D
Sbjct: 391 MRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEID 450
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY + + GE+ A + +A+++ + + +L Y + A+
Sbjct: 451 PHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIAN 510
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Q L +D F+ AY R + G +A+ D
Sbjct: 511 YTQALELDPEFAVAYTNRANVYRIQGDCHEALTD 544
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ AI+ + + +P A RG R +++ A++DF+ ++ +P
Sbjct: 392 RGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEIDP 451
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ R GE A+ D +ALE +P + + G + + A+ +
Sbjct: 452 HSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIANY 511
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD E AYT G+ +A + +AI LD N + + + ++ + N
Sbjct: 512 TQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGN 571
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ Q L ++ ++ AY+ RG +G AI D +
Sbjct: 572 HQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYT 614
>gi|423064909|ref|ZP_17053699.1| putative TPR repeat protein [Arthrospira platensis C1]
gi|406714152|gb|EKD09320.1| putative TPR repeat protein [Arthrospira platensis C1]
Length = 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AL C +Q + ++ + + + +G +L L +H++A+
Sbjct: 446 MDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAV 492
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ ++Q LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 443 NRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAI 560
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ ++ + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 445 GMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++++ RG LL L ++++AI L
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASL 597
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +S+G V ++ A+ +D+ LK D EA +GRG ++ E A++++
Sbjct: 473 ELWISQGGVLVKLARHEEAVICYDRAISLKSDSY--EAWMGRGEILTALKQYEQALANWD 530
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P A +AW +RG + + +AI A+ +P+ A+ RG + + K +
Sbjct: 531 RVIALQPDAYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKY 590
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
A+ L + + K+ ++ L A SIG+
Sbjct: 591 QEAIASLGKAISIQKDLRNG-KKLANASQSIGD 622
>gi|428304585|ref|YP_007141410.1| hypothetical protein Cri9333_0985 [Crinalium epipsammum PCC 9333]
gi|428246120|gb|AFZ11900.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 287
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 102/191 (53%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + +AAI+ F +AI+ N +A+ R A + LG EA++D ++A+
Sbjct: 67 LYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAIN 126
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ D R + ++ +A+ D + ++++ +N AY Y G A +GE+ A
Sbjct: 127 LKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAI 186
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E + +A+ +D +A+ + Y N KA+E Q + +D +F++AY+ RG+
Sbjct: 187 ENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQ 246
Query: 598 LGQHKKAIKDL 608
LG+ +AI+D+
Sbjct: 247 LGKKAEAIEDI 257
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RG+ Q+ G Y +AI++FDQ +K + +A R A + A+ D+T
Sbjct: 64 AVDL-YNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYT 122
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI P G+A+ R A G AI D ++A+ P +AD +G +
Sbjct: 123 QAINLKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEH 182
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+E+ + + +D +N AY L + + KA E + ++++LD F EA+ +
Sbjct: 183 LAAIENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGV 242
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQ 600
L +A+E +++ LY+ ++ ++ Y L+ L Q
Sbjct: 243 TSLQLGKKAEAIEDIRKAADLYLSQKKTQNYQSAIALVKQLQQ 285
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA L+ RG+ + D+ AA+ +K++ ++ A+ A S +G Y +A + +
Sbjct: 63 SAVDLYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYT 122
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI L +F +A+ + Y N + A+ Q + I+ + + AY +G LG+H
Sbjct: 123 QAINLKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEH 182
Query: 602 KKAIKDLSSG 611
AI++ +
Sbjct: 183 LAAIENYNQA 192
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 20 ICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFC 78
I D+ ++++S A A R L L ++S+A++ + + D NRA+
Sbjct: 84 IALFDQAIKINSKDADAFYNRAYAYSL--LGSYSEAVKDYTQAINLKPDFGDAYSNRAYA 141
Query: 79 YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
Y ++ I DC +A++++P AYI KG A+ LG A+ + +
Sbjct: 142 YYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIENYNQA 192
>gi|402848922|ref|ZP_10897168.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
gi|402500798|gb|EJW12464.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
Length = 269
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y A++ FD+ + DP Y +A RG ++E A++D+ A++ +P
Sbjct: 50 RGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDP 109
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A RG A G+ + A+QD +KA++ P++A + RG++ + + A++D
Sbjct: 110 SYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDF 169
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L ++ Y L +IG+ K A + A+Q++ ++AW Y+ +
Sbjct: 170 STAIGLSQQQAEPYVARALTYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQND 229
Query: 567 SEKALECLQQVLYIDKRFSKA 587
EKA + L + K F A
Sbjct: 230 REKAAGSYAKALALRKDFQPA 250
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I++D R + RG+ G+ A++ +D+ L+ DP Y A +GRG + +L
Sbjct: 69 RAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDL 128
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AA+ DF +AIQ P +A+ RG + + AI D S A+ A+ R +
Sbjct: 129 LAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARAL 188
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D AA +DL V+++ EN A+T GLA + +KA ++ KA+ L ++F
Sbjct: 189 TYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQNDREKAAGSYAKALALRKDFQ 248
Query: 552 EA 553
A
Sbjct: 249 PA 250
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+S +L ++P P+A RG+ + A++DF AI +P +A+ RG
Sbjct: 30 LSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYR 89
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G+ A+ D +ALE +P+ A RG+V+ D AA++D + +++ +N AY
Sbjct: 90 QMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAY 149
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
GL S +Y+ A + AI L + E +
Sbjct: 150 YNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPY 183
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A +S T + NP+ +A+ RG G EA+ D +A+ +P A RG+V
Sbjct: 28 ANLSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLV 87
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D +++D A+ G+ + G+ A + KAIQ+ + +
Sbjct: 88 YRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQ 147
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+ + YQ + A++ + + ++ ++ Y R L +G K
Sbjct: 148 AYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARALTYLAIGDTK 197
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%)
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
L+ L PN + RG V + + A+ D + LD AY GL +G
Sbjct: 33 LTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYRQMG 92
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+ + A + +A+++D ++ A ++ + AL+ + + I ++AY+ R
Sbjct: 93 QIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAYYNR 152
Query: 592 GLLLHGLGQHKKAIKDLSS 610
GLL Q++ AI D S+
Sbjct: 153 GLLYQSQRQYQYAIDDFST 171
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A + L+A + + + AY G L G YK+A +AI LD + +A+ +
Sbjct: 28 ANLSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLV 87
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ + E AL + L ID ++ A+ RG++ G A++D +
Sbjct: 88 YRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFN 136
>gi|405978666|gb|EKC43036.1| Tetratricopeptide repeat protein 13 [Crassostrea gigas]
Length = 1032
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 123/238 (51%), Gaps = 11/238 (4%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA--RAFQRELE 432
++K+ +D +L+ G +N G A+ IF+ IL P A GRG R +E+
Sbjct: 682 QTKNNDIDSKLALGFVSINVGNLDDAMQIFNNILVYHPDSVGAYYGRGIVYQRMGIQEIA 741
Query: 433 AA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A + +FTEAI + + E ++RR ++ AL +A++DL+ A + +S + R
Sbjct: 742 NAAKSVREFTEAIMKDENHHEIYERRAESYIALQHFNDALKDLNIAAK-SSSSKRLFFIR 800
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
GIV+ ++F A ED LD +N +Y +LGLAL G+ + A E ++L
Sbjct: 801 GIVHLLLENFVEAEEDFRR--NLDTDNSLYVGSYFHLGLALYYQGKVRNAIEVFKDVLKL 858
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ +EA L Q ++++ N + A + Q ++++ ++ + L G +L+ G+H+ A
Sbjct: 859 KPDHVEASTSLGQAFREIGNLKPAWKRFNQSVHMNPNHAQTWQLWGSMLYTQGEHRGA 916
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S+ V G+A +GK +AI +F +LK P + EA G A L+ A
Sbjct: 826 SLYVGSYFHLGLALYYQGKVRNAIEVFKDVLKLKPDHVEASTSLGQAFREIGNLKPAWKR 885
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
F +++ NP+ + W+ G GE A K L+ P++ +
Sbjct: 886 FNQSVHMNPNHAQTWQLWGSMLYTQGEHRGARLHFDKCLDINPSNIN 932
>gi|307591404|ref|YP_003900203.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306986258|gb|ADN18137.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 535
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 415 PEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
PE+ +G RG +E E A+ D+ AI+ NP + + +RG AL + +A+ D
Sbjct: 313 PESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSD 372
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+KA+E P SA+ + RG + F+ KD++ A+ D + ++ D + AY+ G +
Sbjct: 373 YNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLK 432
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y +A + KAI+L+ + + + Y +L EKA+ L Q + + +AY R
Sbjct: 433 KYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKR 492
Query: 592 GLLLHGLGQHKKAIKDLSSGS 612
GLL G ++A DL + +
Sbjct: 493 GLLCQKAGNKQQARSDLQTAA 513
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG F +E E A+SDF +AI P A+ R L + +++ DL+K
Sbjct: 79 ETYSKRGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKT 138
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E P S + ++RG++ ++ + ++ A+ DL+ + ++ Y L + +Y +
Sbjct: 139 IEINPQSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQ 198
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + K I+LD A+ + Y L +KA+ +V+ +D + ++AY RGLL
Sbjct: 199 ALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLY 258
Query: 596 HGLGQHKKAIKDLSSG 611
+ L Q+ K + D S
Sbjct: 259 YKLQQYDKVLSDYSKA 274
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 108/230 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+++ + + + N G AI +++ +P Y EA + T + + +
Sbjct: 9 TIEVLFEQAVNKANRGDLTGAIEDLPKVISFNPSYSEASQTKNTLDKDKDLKKYKNTLSN 68
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AIQ N E + +RG E +A+ D +KA++ P + + R V ++ + +
Sbjct: 69 LAIQINAKLAETYSKRGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQY 128
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ ++ DL+ ++++ ++ +AY GL + +Y +A KAI ++ F +G+
Sbjct: 129 DQSLSDLAKTIEINPQSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRAL 188
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y L ++AL +++ +D + + AYH R L L ++ KAI D S
Sbjct: 189 VYWKLKKYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYS 238
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F R + + +D RG KY A+S +++ ++ P E RG
Sbjct: 337 FDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQ 396
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ A+SD+ +AI+++ +A+ +RG L + +A+ D +KA+E P AD+ +
Sbjct: 397 LKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYY 456
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + + K++ AV DLS +K + E+ AY+ GL G ++A
Sbjct: 457 NRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKRGLLCQKAGNKQQA----------- 505
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQV 577
R+ L+ L + DL N ++ ++ L+++
Sbjct: 506 RSDLQTAASLFRLRGDLKNYKQIMDVLRKL 535
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y A+S F++ + P A R + + ++SD + I+ NP
Sbjct: 84 RGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTIEINP 143
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ +RG L + +A+ DL+KA++ P A R +V +K K ++ A+ +
Sbjct: 144 QSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNY 203
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + +AY Y S + EY KA + K I LD EA+ Y L
Sbjct: 204 NKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQ 263
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+K L + + ++ + Y RG L ++ KA+ D
Sbjct: 264 YDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLD 304
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ ++++++ D A R + E + AISD+++ I +P EA+++R
Sbjct: 195 KYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKR 254
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L + + + D SKA+E P RG F+ K+++ A+ D ++ E
Sbjct: 255 GLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKPE 314
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ Y G + EY+KA + +AI+++ F++ + Y+ L +AL
Sbjct: 315 SEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDYN 374
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + ++ Y+ RG L L + KA+ D +
Sbjct: 375 KAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKA 410
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ RG+ +Y A+S ++ + +P++ R ++ + A+ ++
Sbjct: 145 SVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNYN 204
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ + A+ R + L E +AI D SK ++ +P + +RG++ +K + +
Sbjct: 205 KLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQY 264
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ + D S ++L+ ++ + Y G + EY KA + KAI+ +
Sbjct: 265 DKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRGD 324
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Y +L EKAL + + I+ F Y RG + L ++ +A+ D +
Sbjct: 325 LYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDYNKA 376
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIEL-AKL----CSLRNWSKAIRILDSLLAQS 66
+L K + + ++L+ +DS +A R +L +KL ++ ++SK I LD ++
Sbjct: 192 KLKKYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVID-LDPQCTEA 250
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
YE R Y +L+ + V+ D KA++L+P YI +G + L ++AL +
Sbjct: 251 YE-----KRGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDY 305
Query: 127 EKGYEH------ALHQSADLKQFLELEE 148
K E + DL +LEL+E
Sbjct: 306 YKAIEFKPESEVGYYIRGDL--YLELKE 331
>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
[Trichodesmium erythraeum IMS101]
gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
erythraeum IMS101]
Length = 738
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 37/289 (12%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
NK +T ++++ I+ ++ + RG+ G Y SAI + + ++ +P + I R
Sbjct: 431 NKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINR 490
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AR + AISD+T+AI+ NP+ +A+ RG++ + + AI++ ++ LE +P+
Sbjct: 491 GIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPD 550
Query: 482 SAD----------------------------------ILHERGIVNFKFKDFNAAVEDLS 507
AD H I F ++ A E+ S
Sbjct: 551 DADAYTNRCSAYLHKGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCS 610
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +DK N AYT LA S+ G ++A + AI+++ + H + L N
Sbjct: 611 IAIGIDKNNAKAYTNRALAQSARGYLQEAIKDFTTAIEINPQDDLNYSHRGMIFSVLKNY 670
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
+A++ Q + ++ +KAY+ RG++LH L AI D + + +
Sbjct: 671 NQAIKDFSQAIRLNSNNAKAYYNRGVILHKLEDLPAAIVDFNKSASLFL 719
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + Y AI + +K Y +A R + A++D T+ ++ NP
Sbjct: 388 RGNSYYSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINP 447
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+K+RG +G+ AIQD S+++ P + RGI +D A+ D
Sbjct: 448 NYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDY 507
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ + AY Y G +L + +Y+ A E + + +++ + +A+ + Y N
Sbjct: 508 TQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGN 567
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ QQ + I+ + AYH + LG++++A ++ S
Sbjct: 568 DSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCS 610
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 9/262 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G +GK +AI+ + + LK +P RG + R E AI D+T I+
Sbjct: 354 KGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAGIKIKA 413
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ +R L +A+ DL++ L PN +RG++ ++ D+ +A++D
Sbjct: 414 NYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDY 473
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++L+ ++ Y G+A ++ + A + +AI+L+ N ++A+ + + + +
Sbjct: 474 SESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLD 533
Query: 567 SEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
+ A+E Q L + + AY R LH G AI D + P +
Sbjct: 534 YQGAIENYNQFLEVKPDDADAYTNRCSAYLHK-GNDSSAIADCQQAIE-INPQ---DFLA 588
Query: 626 WRNLC---FNAWPFIRRRLLCT 644
+ NLC FN + R C+
Sbjct: 589 YHNLCIAYFNLGEYQRATENCS 610
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L +G A Q + +AAI+++TEA++ NP + +RG + + +AI+D +
Sbjct: 349 QTLYKKGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAG 408
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ + N D ++R +V ++ + + A+ DL+ ++++ AY GL IG+YK
Sbjct: 409 IKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKS 468
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + + ++I+L+ + + + L + A+ Q + ++ KAY+ RG L
Sbjct: 469 AIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSL 528
Query: 596 HGLGQHKKAIKD 607
+ ++ AI++
Sbjct: 529 FKMLDYQGAIEN 540
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G+ ++GQ A G+ AI + ++AL+ P A I ++RG + + + A++D +A
Sbjct: 348 GQTLYKKGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTA 407
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+K+ + AY Y++A Y +L N +
Sbjct: 408 GIKIKANYEDAY------------YQRA----------------------LVYYELDNKD 433
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
KA+ L Q L I+ +++AY RGL+ + +G +K AI+D S R
Sbjct: 434 KAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIR 478
>gi|254413697|ref|ZP_05027466.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179294|gb|EDX74289.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 320
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI I+++ ++ P + RG + + + ++ +A++ NPS +A+ R
Sbjct: 34 QYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYNNR 93
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +AI D ++A++ P + RG + ++ A+ D S ++L+ +
Sbjct: 94 GNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNPD 153
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+Y LG ++ +Y++A +++ KAI ++ N+ +A+ + Y L N +A+
Sbjct: 154 YAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYA 213
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ + +D + +AY+ RG + L ++K+A+K+ + T+ P+ I
Sbjct: 214 KAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQ-ALTLCPNHI 257
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 4/274 (1%)
Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYAS 399
E + L+ ++ ET +A++ ++ + +K+ + LS RG Y
Sbjct: 13 EYKRNLAINYNRQAETLYQARQYEQ-AIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQE 71
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+ ++ LK +P YP+A RG + AI+D+T+A++ NP A+ RG A
Sbjct: 72 VLQNYNDALKLNPSYPQAYNNRGNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAY 131
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L E +A+ D S A++ P+ A+ + G + A++ + ++ A
Sbjct: 132 YNLSEYKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQA 191
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G + + +A + KAI LD EA+ + Y L ++AL+ Q L
Sbjct: 192 YNNRGNSYYYLNNVVQAISNYAKAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQALT 251
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++Y+ RGL+ L Q +KAI DL +
Sbjct: 252 LCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVK 285
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI +D+ + +P Y +A RG + + + AIS++ +AI + EA+
Sbjct: 169 NQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDSQNHEAYNN 228
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A AL + EA+++ +AL PN + + RG+V K K A+ DL VKL +
Sbjct: 229 RGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKLAQ 288
Query: 515 E 515
+
Sbjct: 289 Q 289
>gi|427420258|ref|ZP_18910441.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425762971|gb|EKV03824.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 477
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+ AISIF+ +++ P Y +A RG A AI DF+ AI
Sbjct: 7 LNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDFSWAIHL 66
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG A+ LG + A++D + ++ P S RG++ + ++ AV
Sbjct: 67 TPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVR 126
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
D ++L Y + G+A G++K+A +A+ L+ + + + L FYQ
Sbjct: 127 DFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQ 186
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++AL Q + +DK + AY+ R L +G + A+ D
Sbjct: 187 --VDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMAD 229
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 23/246 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + Y A++ F+Q + D +A R R + A++D+ +A+ NP
Sbjct: 179 RGLAYFYQVDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNP 238
Query: 447 SAGEAWKR-----------------------RGQARAALGESVEAIQDLSKALEFEPNSA 483
+ EA+ + RG RA LG+S A+ D ++AL +PN A
Sbjct: 239 ALPEAYPQTLKQLHNALQDYPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHA 298
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG+V ++ A D S ++L+ + A++ G +G + A + +A
Sbjct: 299 YVYNNRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQA 358
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+ L+ + A+ H + + DL N KA+ + L + + + R +L L +
Sbjct: 359 LDLNPSLANAYVHRGRIHVDLKNYMKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEG 418
Query: 604 AIKDLS 609
A+ D++
Sbjct: 419 ALADVN 424
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 23/252 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG AQ G +A+ F++ ++ P+ RG R A+ DF A++
Sbjct: 75 LNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVRDFDYALRL 134
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + RG A G+ +AI DL++AL P+ A ++RG+ F D+ A+
Sbjct: 135 QPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQVDYKQALA 194
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFY-- 561
D + V LDK+ AY + +G+Y A + KA+ L+ EA+ L Q +
Sbjct: 195 DFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNA 254
Query: 562 -QD-------------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
QD L +S AL + L +D + Y+ RGL+ L +
Sbjct: 255 LQDYPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNY 314
Query: 602 KKAIKDLSSGSR 613
+ A D S R
Sbjct: 315 EMAATDFSEAIR 326
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ Y A + F + ++ +P + EA RG R LE A+ D +A+ N
Sbjct: 303 NRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQALDLN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG+ L ++A+ D +KAL +P++A L+ER ++ F+ D A+ D
Sbjct: 363 PSLANAYVHRGRIHVDLKNYMKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEGALAD 422
Query: 506 LSACVKLDKENKSAY 520
++ ++L + AY
Sbjct: 423 VNRALELQPQFSDAY 437
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + A++ + + L+ DP + RG R + E A +DF+EAI+ N
Sbjct: 269 NRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFSEAIRLN 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG R LG A+QD+++AL+ P+ A+ RG ++ K++ A+ D
Sbjct: 329 PQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNYMKAMAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L + +A+T L S+ ++ L
Sbjct: 389 FNKALSLQPD--AAHT---LNERSVLRFR-----------------------------LN 414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++E AL + + L + +FS AY R L+ G A DL S
Sbjct: 415 DTEGALADVNRALELQPQFSDAYINRSLIRFDRGDRSGAFSDLDS 459
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M + L+ +G A +++ AIS F I+S P+ +A+ RG A A+G AI+D
Sbjct: 1 MTAKDLLNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDF 60
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S A+ P+ A RG K +AA+ED ++L + Y GL +G
Sbjct: 61 SWAIHLTPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGN 120
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A A++L +F + + + ++A+ L + L ++ +K Y+ RG
Sbjct: 121 YAGAVRDFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRG 180
Query: 593 LLLHGLGQHKKAIKDLS 609
L +K+A+ D +
Sbjct: 181 LAYFYQVDYKQALADFN 197
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
FN +E L K AY G A ++G Y A E AI L ++ A+ +
Sbjct: 26 FNTVIESLPNYAK-------AYFNRGCAHYAMGNYAVAIEDFSWAIHLTPDYASAYLNRG 78
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ L +++ ALE ++ + + ++ Y RGLL +G + A++D R + PH
Sbjct: 79 NAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVRDFDYALR-LQPH 137
Query: 619 L----IWNLTRW 626
+W W
Sbjct: 138 FPRGYLWRGVAW 149
>gi|428223874|ref|YP_007107971.1| hypothetical protein GEI7407_0418 [Geitlerinema sp. PCC 7407]
gi|427983775|gb|AFY64919.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 267
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P RG A + + EAAI+D++EAI+ P EA+ RG A A LG A QD S+
Sbjct: 45 PGEFFVRGMYLAQEGKTEAAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAEQDFSR 104
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL P D RG+V D A+ D + ++LD ++ S+Y G + Y+
Sbjct: 105 ALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDASSYYNRGNVYDEMERYQ 164
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A + +AI+L + A+ + L N A+E Q + ID + AY+ RG +
Sbjct: 165 RAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIEDFSQAIEIDPENAIAYYSRG-V 223
Query: 595 LHGLGQHKK-AIKDL 608
+HGL +++ AI DL
Sbjct: 224 VHGLMENRPSAIADL 238
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y A F + L +P +A RG RA + + AI+DFT A++ +
Sbjct: 84 NRGLAYAQLGRYDRAEQDFSRALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLD 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ RG + AI D +A+ P + RG V ++F A+ED
Sbjct: 144 PQDASSYYNRGNVYDEMERYQRAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIED 203
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++D EN AY G+ + + E + + A LE L Q Q
Sbjct: 204 FSQAIEIDPENAIAYYSRGV-VHGLMENRPSAIAD----------LEKAADLFQRQQQPE 252
Query: 566 NSEKALECLQQV 577
N ++AL+ LQ++
Sbjct: 253 NYQRALDKLQEL 264
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D S ++L E AY GLA + +G Y +AE+ +A+ L+ +A+ +
Sbjct: 63 AAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAEQDFSRALLLNPRLGDAYDNRGVV 122
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ A+ L +D + + +Y+ RG + + ++++AI D R
Sbjct: 123 RAARGDAPGAIADFTTALRLDPQDASSYYNRGNVYDEMERYQRAIADYDEAIR 175
>gi|443319283|ref|ZP_21048517.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
gi|442781110|gb|ELR91216.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
Length = 492
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 34/258 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G+Y +AI+ FD + + P Y A + RG A + + AI ++AI+ +
Sbjct: 72 NRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEAIGSLSQAIRLD 131
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG +A+ D+ +AL +P +G+V+ + + +A+ +
Sbjct: 132 PTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDTQIGNIESAIAN 191
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEE--------------AHL---------- 541
LS ++++ +N +AY G A G+Y+ A AH+
Sbjct: 192 LSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLG 251
Query: 542 ----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
A++ +E + + + Y ++A+ L + + D F Y R
Sbjct: 252 NLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNR 311
Query: 592 GLLLHGLGQHKKAIKDLS 609
G+L +G H AI DLS
Sbjct: 312 GILHSSMGNHGSAIADLS 329
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y SAI+ F +++ A +GRG A L A D A++ P
Sbjct: 209 RGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTP 268
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A E + R AA G AI+DL +A+ + + RGI++ + +A+ DL
Sbjct: 269 GAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADL 328
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++L+ ++ AY Y G A + G ++A + +A+ LD N E + + +
Sbjct: 329 SRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGD 388
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL Q +++ ++ AY RG++ +G ++A DLS
Sbjct: 389 IPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLS 431
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+E P P L RG + E AI+DF AI P A+ RG A + LG + EA
Sbjct: 61 EEVPPSPVELYNRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEA 120
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS+A+ +P A RG ++ + A+ D+ + D E SAY Y GL +
Sbjct: 121 IGSLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDT 180
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI--DKRFSK 586
IG + A +AI+++ L A+ L F D A ++ + Y+ + R S
Sbjct: 181 QIGNIESAIANLSEAIRINPQNLNAY-ILRGFAYDRAGDYRS--AIADFTYVIENTRASG 237
Query: 587 AYHL-RGLLLHGLGQHKKAIKDLSSGSR 613
H+ RG+ + LG A +DL++ R
Sbjct: 238 IAHVGRGVAHYHLGNLTDAERDLNTAVR 265
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ +R +G+ AI D+ + D + + RG + +AI+D +
Sbjct: 270 AVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADLS 329
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ N + A++ RG A+ A G EA+ D S+AL +PN+ ++ RG V F D
Sbjct: 330 RALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGDI 389
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + + L + +AY+ G+ + +G+ ++A
Sbjct: 390 PGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRA 426
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 15/258 (5%)
Query: 366 KKFCVTRISKSKSISVDF-------------RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ F R +S DF + RG+A + G A + ++ P
Sbjct: 209 RGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTP 268
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
E R A Q + AI D EAI + S + RG +++G AI DL
Sbjct: 269 GAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADL 328
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S+ALE +SA RG + A+ D S + LD N YT G + G+
Sbjct: 329 SRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGD 388
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF--SKAYHL 590
A + +AI L ++ A+ Y + +S++A + L V+ +++ ++
Sbjct: 389 IPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVEEGAVSPDVFYQ 448
Query: 591 RGLLLHGLGQHKKAIKDL 608
RG+ LG A +DL
Sbjct: 449 RGMSRLRLGDRFGARQDL 466
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + +S++ ++ D L+ RG AQ+ G A+ + Q L DP PE R
Sbjct: 320 NHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLR 379
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R + ++ A++D+ +AI P A+ RG A +G+S A DLS + E
Sbjct: 380 GKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVEEG 439
Query: 482 --SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
S D+ ++RG+ + D A +DL E A Y
Sbjct: 440 AVSPDVFYQRGMSRLRLGDRFGARQDLEQAANRYLETGQAEPY 482
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 374 SKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S S++I +D L+R G A G A+ + L DP A + +G
Sbjct: 123 SLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDTQI 182
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH- 487
+E+AI++ +EAI+ NP A+ RG A G+ AI D + +E ++ I H
Sbjct: 183 GNIESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIE-NTRASGIAHV 241
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ + A DL+ V+ Y ++ G ++A +AI D
Sbjct: 242 GRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRD 301
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+F + + + + N A+ L + L ++ + AY RG G ++A+ D
Sbjct: 302 TSFFAGYLNRGILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLD 361
Query: 608 LS 609
S
Sbjct: 362 YS 363
>gi|148285081|ref|YP_001249171.1| hypothetical protein OTBS_2002 [Orientia tsutsugamushi str.
Boryong]
gi|146740520|emb|CAM81097.1| tetratricopeptide repeat protein with 9 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 379
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G +AI +D +K P Y EA I +G AF +L+ AI F AI+ +
Sbjct: 181 NKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYD 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS ++ +G + L EA++ + A++++PN ADI + +G++ K AVE+
Sbjct: 241 PSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVEN 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
+K + Y G++L S+G+Y KA+E AI+ N + + LT+F
Sbjct: 301 FDIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYMPNLIAEYEATIKRLTEF 359
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI + D +K P Y A +G + E E A+ +F AI+ N S EA+
Sbjct: 122 GKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSSYPEAYYN 181
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ AI++ A+++ PN A+ +G+ A+E +K D
Sbjct: 182 KGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYDP 241
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ G LS + Y +A E+ AI+ D N + + + ++ L ++A+E
Sbjct: 242 SCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVENF 301
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ + F++ Y +G+ L LGQ+ KA ++ + + MP+LI
Sbjct: 302 DIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIK-YMPNLI 346
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 34/247 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI +D +K DP Y A +G A + + AI +F AI+ NP EA+ +
Sbjct: 55 KYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIKYNPHFAEAYNNK 114
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ LG++ EAI A++++PN + +G ++ A+E+ ++ +
Sbjct: 115 AVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSS 174
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
AY G+AL ++G+ + A E + AI+ N+ EA+ G F L N+ + +
Sbjct: 175 YPEAYYNKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFD 234
Query: 573 --------CLQQ------VLYIDKRFSKA-----------------YHLRGLLLHGLGQH 601
C++ VL + KR+S+A Y+ +G++ LG+H
Sbjct: 235 LAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKH 294
Query: 602 KKAIKDL 608
++A+++
Sbjct: 295 QEAVENF 301
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G+ G+ +AI FD +K DP ++ +G + + A+ AI+
Sbjct: 214 INKGLTLAFLGQLQNAIEHFDLAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKY 273
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + + +G LG+ EA+++ A+++ PN A+ E+GI ++ A E
Sbjct: 274 DPNCADIYYNKGMIFEKLGKHQEAVENFDIAIKYNPNFAENYLEKGISLVSLGQYSKAKE 333
Query: 505 DLSACVK 511
+ + +K
Sbjct: 334 NFNLAIK 340
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
RL K H+ I D ++ D ASA ++ I L L ++ N+ AI+ + A++
Sbjct: 52 RLKKYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIK-YNPHFAEA 110
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y +L +K I CD A++ P + AY KG + + LG EEA+ +
Sbjct: 111 YN-----NKAVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENF 165
Query: 127 E 127
+
Sbjct: 166 D 166
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 484 DILHER----GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
DIL E G + K ++ A+++ +K D SAY G+AL+++ + K+A E
Sbjct: 37 DILAEEYFNIGSSFLRLKKYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIEN 96
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
AI+ + +F EA+ + Y L +++A+ + + AY+ +G L+ LG
Sbjct: 97 FDLAIKYNPHFAEAYNNKAVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLG 156
Query: 600 QHKKAIKDLSSGSR--TMMPHLIWN 622
++++A+++ R + P +N
Sbjct: 157 EYEEAMENFDIAIRYNSSYPEAYYN 181
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 37 ITARIELAKLCSLRNWSKAIRILDSLLAQSYE---IQDICNRAFCYSQLELHKHVIRDCD 93
I + LA L L+N AI D LA Y+ ++ CN+ + S L+ + + C+
Sbjct: 214 INKGLTLAFLGQLQN---AIEHFD--LAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCN 268
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
A++ DP Y KG F LG+ +EA+ ++
Sbjct: 269 LAIKYDPNCADIYYNKGMIFEKLGKHQEAVENFD 302
>gi|429124499|ref|ZP_19185031.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
gi|426279738|gb|EKV56759.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
Length = 422
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ G Y AI ++ L+ Y +A RGTA+ E AI DF +AI+ P
Sbjct: 210 GACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQ 269
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A++ALG +A++D SK++ EP D + R IV N AV+D
Sbjct: 270 YFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYD 329
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
++LD N +AY GL+ ++ +Y+KA + + + ++L+ +A+ + T++ L
Sbjct: 330 IVIELDNNNINAYYNRGLSYYNLADYEKALKDYDRVMELNPKLADAYNNRGFTKYSMGL- 388
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
E+A+ + + ID + KA
Sbjct: 389 -YEEAINDYDKAIEIDANYEKA 409
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G + AI+ + + + D Y E R EAAI D+ + I+ P+
Sbjct: 41 GLSKQALGFFEEAINYYSKGIDIDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A+ LG +A++D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSRAYNDRGFAKGNLGLYEDALKDIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD AY +G A +G Y++A + K I+L N A+ ++ L
Sbjct: 161 KALELDDTEVYAYNGIGDAKRGMGLYEEAISYYKKVIEL-SNSSYAYNNIGACKIGLGLY 219
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ A+ + + L I ++ AY+ RG + L ++ AIKD + + P +
Sbjct: 220 KDAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDK-AIELYPQYFY 272
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 90/174 (51%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI D +A++ +A+ RG A+ L +AI+D KA+E P + RG
Sbjct: 222 AIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAK 281
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ED S + ++ + AY + +++G + +A + + I+LD N + A
Sbjct: 282 SALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNNNINA 341
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + Y +LA+ EKAL+ +V+ ++ + + AY+ RG + +G +++AI D
Sbjct: 342 YYNRGLSYYNLADYEKALKDYDRVMELNPKLADAYNNRGFTKYSMGLYEEAIND 395
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 44/273 (16%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I +D +R + N G Y +AI +D++++ P + A RG A+
Sbjct: 58 SKGIDIDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGL 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI----- 485
E A+ D +AI + + +++ R + + +EAI+D KALE +
Sbjct: 118 YEDALKDIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIG 177
Query: 486 -------LHERGIVNFK------------------------FKDFNAAVEDLSACVKLDK 514
L+E I +K +KD A+ D++ +++
Sbjct: 178 DAKRGMGLYEEAISYYKKVIELSNSSYAYNNIGACKIGLGLYKD---AIIDINKALEIYD 234
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E AY G A ++ Y+ A + KAI+L + A+ + L E ALE
Sbjct: 235 EYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDF 294
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + I+ ++ AY+ R ++ + +G H +A+KD
Sbjct: 295 SKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKD 327
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
G+ E ++ A +F + L+ED E G ++ E AI+ +++ I
Sbjct: 4 FEEGLQLFRETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDI 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + GE + R LG AI+D K +E P + ++RG + A++
Sbjct: 64 DENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALK 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D+ + LD N +Y +Y +A E + KA++LD + A+ + + +
Sbjct: 124 DIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGM 183
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ ++V+ + S AY+ G GLG +K AI D++
Sbjct: 184 GLYEEAISYYKKVIELSNS-SYAYNNIGACKIGLGLYKDAIIDIN 227
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 34/180 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N Y AI FD+ ++ P Y A RG A++ E A+ DF+++I
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301
Query: 446 PSAGEAWKRRGQARAALG---ESVE-------------------------------AIQD 471
P +A+ R + +G E+V+ A++D
Sbjct: 302 PKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKD 361
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ +E P AD + RG + + A+ D +++D + A AL IG
Sbjct: 362 YDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYDKAIEIDANYEKAKQNKQEALKKIG 421
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NR LEL++ I+D DKA++L P AY +G A SALG E+AL + K
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301
Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
Y A + A +K + L A +D + E D +N
Sbjct: 302 PKYIDAYYNRAIVKNNMGLH---NEAVKDYDIVIELDNNN 338
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 28/148 (18%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L ++SK+I I + Y NRA + + LH ++D D ++LD + AY
Sbjct: 290 ALEDFSKSINIEPKYIDAYY------NRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYY 343
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
+G ++ L E+AL D + +EL L A +R T
Sbjct: 344 NRGLSYYNLADYEKALK--------------DYDRVMELNPKLADAYNNRGFT------- 382
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKS 195
S+ + E +N DK E N+ K+
Sbjct: 383 -KYSMGLYEEAINDYDKAIEIDANYEKA 409
>gi|145478569|ref|XP_001425307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392376|emb|CAK57909.1| unnamed protein product [Paramecium tetraurelia]
Length = 1388
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 119/232 (51%), Gaps = 10/232 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPM-YPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GI G A+++F + ++ D M YP RA ++E E A+ +F +AI+
Sbjct: 128 KGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRALKKE-EDALLEFNKAIEIR 186
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ +A+ R + + + EA+ D +K +E +P A RGI+ + + + A+ D
Sbjct: 187 PTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSD 246
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ + + + GL + E +KA E + +AI ++ F +A+ + Y+++
Sbjct: 247 YNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEID 306
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL--------LLHGLGQHKKAIKDLS 609
++KAL ++L ++ + K Y RG LL LGQ++ A++D +
Sbjct: 307 QNDKALSDYTKILELNPKDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYT 358
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 231/555 (41%), Gaps = 72/555 (12%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
RA + + + + D +K ++LDP Q Y +G L + EEALS Y A+
Sbjct: 196 RAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALS----DYNMAI 251
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN- 193
+ + ++ + LL ++ +L ++ N K ++ +N
Sbjct: 252 KLNPKVYKWFYFQGLLFKVLNEKE-----------KALEEYNQAISVNPKFAKAYKNRAI 300
Query: 194 -KSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSE 252
+I + D ++ + D + R G + + K L L+++ +
Sbjct: 301 LYKEIDQNDKALSDYTKILELNPKDEKIYQFR------GKKLVLIKGNL-----LKQLGQ 349
Query: 253 NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLS 312
N D +K+ EIN ++++ + +A++ ++ G+ T D +DK+
Sbjct: 350 NELALQDYTKTI-------EINPNDTENY------VRRATLYKQLGQNDLATKD-YDKI- 394
Query: 313 SDSASLNDSNTNSESYSKSSISD-------------NKSSDSTESRSKLSFKWDMLKETS 359
L NS Y K ++ N++ + L K L + +
Sbjct: 395 -----LEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDANLYLKRGDLNKLT 449
Query: 360 NEAKRNKKFCVTRISKSKSISVDFR---LSRGI--AQVNEGKYASAISIFDQILKEDPMY 414
N+ V SK+ I+ + L+R + Q+N+ + A F +IL+ + +
Sbjct: 450 NQLD----MAVNDYSKAIEINPNNEVALLNRALLFKQLNQTE--RAFQDFHRILEINHNH 503
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
A RG + E A+ DF + IQ +P + R + ++ A+QDL+
Sbjct: 504 LNAYHHRGNLYKELNQDELALQDFNKIIQIDPKIVIVYYNRAKIYQKQQKNDLALQDLNV 563
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +P L ERGI+ + + + A+ D + ++++ A+ LG L S+ + +
Sbjct: 564 AVELDPKITYTLVERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQ 623
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A +++ KA +LD+N A+ + + L EKAL + + ++ + + +Y R L
Sbjct: 624 QALDSYNKAAELDQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASL 683
Query: 595 LHGLGQHKKAIKDLS 609
L + Q +AI D +
Sbjct: 684 LSDMNQKDRAIDDFT 698
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D+IL+ +P + ++ E AI+ +AIQ NP + +RG
Sbjct: 391 YDKILEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDANLYLKRGDLNKLTN 450
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA---AVEDLSACVKLDKENKSAY 520
+ A+ D SKA+E PN+ L R ++ FK N A +D ++++ + +AY
Sbjct: 451 QLDMAVNDYSKAIEINPNNEVALLNRALL---FKQLNQTERAFQDFHRILEINHNHLNAY 507
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ G + + + A + K IQ+D + + + + YQ ++ AL+ L + +
Sbjct: 508 HHRGNLYKELNQDELALQDFNKIIQIDPKIVIVYYNRAKIYQKQQKNDLALQDLNVAVEL 567
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
D + + RG+L + + + KA+ D +
Sbjct: 568 DPKITYTLVERGILYYNMNEKDKALNDYNKA 598
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
K AI+ +++ L +P AL+ RG A + + A++DFT+ I+ P+ +
Sbjct: 833 NKPQDAIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSS 892
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R L + EA+QD +KA+E P A + R I + + A++D + ++L+
Sbjct: 893 RAPLLMKLAQKEEALQDYNKAIEVNPGEAANYYNRAIYYNQVQQKELALQDYNKTIELNS 952
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQDLANSEKAL 571
+ AY L L SIG +A + L A +L + FL G ++Y D EKA
Sbjct: 953 NSYLAYNNRALLLQSIGRKDEALQDVLNANRLCPDNPLFLANLG--DRYYSD-QQFEKAT 1009
Query: 572 ECLQQV-LYID 581
+Q YID
Sbjct: 1010 HYYKQAQFYID 1020
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
K A+ +++ ++ DP + RG + E A+SD+ AI+ NP + +
Sbjct: 204 NKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYF 263
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L E +A+++ ++A+ P A R I+ + + A+ D + ++L+
Sbjct: 264 QGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEIDQNDKALSDYTKILELNP 323
Query: 515 ENKSAYTYLGLA--------LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ Y + G L +G+ + A + + K I+++ N E + Y+ L
Sbjct: 324 KDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINPNDTENYVRRATLYKQLGQ 383
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++ A + ++L I+ + S Y+ + L L L Q++ AI L+
Sbjct: 384 NDLATKDYDKILEIEPKNSNVYYKKALFLEELQQNELAITLLNQA 428
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ A+++ EA++ N + EA + + G++ +A+++++KA++ P + + R
Sbjct: 36 LDDALNEVNEALKINSNYSEALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKEAYYNRA 95
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-N 549
++ K K +N A+ D +LD ++ + G+ + G ++A K I+LD+ N
Sbjct: 96 LIFRKNKAYNLALNDAEMYYQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIELDQMN 155
Query: 550 F--------------------LE-------------AWGHLTQFYQDLANSEKALECLQQ 576
+ LE A+ + D+ E+AL +
Sbjct: 156 YPAHYQSGLILRALKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNK 215
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +D + ++ Y RG+LL L ++++A+ D
Sbjct: 216 TIELDPKKAQTYECRGILLKQLEKYEEALSD 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 382 DFRLSRG-IAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAI 435
D+ +SRG I Q ++ A+ +++ ++ P Y AL+ R + +E AI
Sbjct: 743 DYYVSRGNILQDPAKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDK-----IELAI 797
Query: 436 SDFTEAIQSNPSAGEAWKRRGQ--------ARAALGESVEAIQDLSKALEFEPNSADILH 487
+D ++I+ NP + +G L + +AI + +KAL P L
Sbjct: 798 ADCNKSIEINPKNELPYIVKGNFDLLILGLIFKELNKPQDAIAEYNKALIINPTCTSALL 857
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+RG K+ A+ D + +++ Y+ L + + ++A + + KAI+++
Sbjct: 858 KRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSSRAPLLMKLAQKEEALQDYNKAIEVN 917
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + +Y + E AL+ + + ++ AY+ R LLL +G+ +A++D
Sbjct: 918 PGEAANYYNRAIYYNQVQQKELALQDYNKTIELNSNSYLAYNNRALLLQSIGRKDEALQD 977
Query: 608 LSSGSR 613
+ + +R
Sbjct: 978 VLNANR 983
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 1/202 (0%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP L+ RG E + A++D+ +AI+ NP +A G +L ++ +A+
Sbjct: 568 DPKITYTLVERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALD 627
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+KA E + N+ H R I+ K + A+ D + L+ ++ +Y+ LS +
Sbjct: 628 SYNKAAELDQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDM 687
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ +A + K++Q++ + L ++ +A++ + + I+ + Y
Sbjct: 688 NQKDRAIDDFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVS 747
Query: 591 RGLLLHGLG-QHKKAIKDLSSG 611
RG +L +H+KA++D +
Sbjct: 748 RGNILQDPAKEHEKALQDYNKA 769
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIEL-----AKLCSLRNWSKAIRILDSLLAQSY 67
L K + E ++ + + + A R EL K +L +++K I LD AQ+Y
Sbjct: 169 LKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIE-LDPKKAQTY 227
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
E C R QLE ++ + D + A++L+P + + + +G F L KE+AL +
Sbjct: 228 E----C-RGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYN 282
Query: 128 KG 129
+
Sbjct: 283 QA 284
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI N + A++ +++ ++ +P +A + G + + A+ + +A +
Sbjct: 576 VERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALDSYNKAAEL 635
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + A+ R L E +A+ D KA+ P SA R + + A++
Sbjct: 636 DQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDMNQKDRAID 695
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + + + +LG + +A + + +AI ++ N + + QD
Sbjct: 696 DFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDP 755
Query: 565 ANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----LSSGSRTMMPHL 619
A EKAL+ + + I +Y+ R LL + + + AI D + + +P++
Sbjct: 756 AKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAIADCNKSIEINPKNELPYI 815
Query: 620 I 620
+
Sbjct: 816 V 816
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 119/293 (40%), Gaps = 59/293 (20%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
+E SN+AK KS+++ + L + +VNE LK + Y
Sbjct: 14 EELSNKAK-------DHFEKSQTLHQNQVLDDALNEVNEA------------LKINSNYS 54
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EAL + + + + A+ + +AIQ NP EA+ R A+ D
Sbjct: 55 EALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKEAYYNRALIFRKNKAYNLALNDAEMY 114
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P S ++ +GI+ + A+ ++LD+ N A+ GL L ++ KK
Sbjct: 115 YQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRAL---KK 171
Query: 536 AEEAHL---KAIQLDRNFLEAWGHLTQFYQDLANSEKAL-----------------EC-- 573
E+A L KAI++ +A+ + D+ E+AL EC
Sbjct: 172 EEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRG 231
Query: 574 --LQQV-------------LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L+Q+ + ++ + K ++ +GLL L + +KA+++ +
Sbjct: 232 ILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQA 284
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 20 ICEIDELVRVDSVMASAITARIELA-----KLCSLRNWSKAIRILDSLLAQSYEIQDICN 74
+ E++E ++++S + A+ + E+ +L +KAI+ L+ L ++Y N
Sbjct: 40 LNEVNEALKINSNYSEALNLKAEILVKKGDTKQALEEVNKAIQ-LNPQLKEAY-----YN 93
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
RA + + + + + D + QLDP + KG G ++EAL+V++K E
Sbjct: 94 RALIFRKNKAYNLALNDAEMYYQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIE 150
>gi|346224662|ref|ZP_08845804.1| TPR repeat-containing protein [Anaerophaga thermohalophila DSM
12881]
Length = 711
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+++ ++ GIA + G++ AI+ + +IL P A + RG A+ + A+ DF+
Sbjct: 130 NINLMINLGIAYILTGQFDKAIATYTEILDTSPKLVRAYLNRGLAKFSASDTTGALKDFS 189
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP + + R G +A+ D+++A++ P+ + RGI+ ++ D
Sbjct: 190 KAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDDL 249
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ED V+++ N Y G+ + IG+ A + + + L L +
Sbjct: 250 RGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRGM 309
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
Y++ KAL V F+ Y+ R + LGQ K A D ++ + M
Sbjct: 310 LYKEKGEFRKALSDFNIVADAYPDFAPVYYNRAEVKQALGQTKAAQLDYNTAMKIEM 366
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 104/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI N ++I+ F + L DP +I G A + + AI+ +TE + ++P
Sbjct: 103 RGILYQNMKNPEASIADFKRGLDIDPRNINLMINLGIAYILTGQFDKAIATYTEILDTSP 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A+ + ++ A++D SKA+E P D R ++ + +F+ A+ D+
Sbjct: 163 KLVRAYLNRGLAKFSASDTTGALKDFSKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADI 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL + S Y G+ + + + E K ++++ + + ++ +
Sbjct: 223 NEAIKLRPDESSFYMNRGIIRYQLDDLRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGD 282
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A++ +VL + + RG+L G+ +KA+ D +
Sbjct: 283 LDGAIDDFSRVLALRGEDLPTLYYRGMLYKEKGEFRKALSDFN 325
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F+QI++ P E R + + + A++D EA++ NP +A+ RG
Sbjct: 45 YVLAIQYFNQIIRAKPYLAEPYFYRALGKYYLEDYIGALNDCNEALERNPYLVDAYNLRG 104
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ +I D + L+ +P + +++ GI F+ A+ + + +
Sbjct: 105 ILYQNMKNPEASIADFKRGLDIDPRNINLMINLGIAYILTGQFDKAIATYTEILDTSPKL 164
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
AY GLA S + A + KAI+++ + + + + ++Y+ N + AL +
Sbjct: 165 VRAYLNRGLAKFSASDTTGALKDFSKAIEVNPYIPDGYVNRSMIEYYR--GNFDDALADI 222
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + S Y RG++ + L + ++D
Sbjct: 223 NEAIKLRPDESSFYMNRGIIRYQLDDLRGTMEDF 256
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 376 SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I V D ++R + + G + A++ ++ +K P + RG R +
Sbjct: 189 SKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDD 248
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L + DF + ++ P + RG RA +G+ AI D S+ L L+ RG
Sbjct: 249 LRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRG 308
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + +F A+ D + + Y ++G+ K A+ + A++++ +
Sbjct: 309 MLYKEKGEFRKALSDFNIVADAYPDFAPVYYNRAEVKQALGQTKAAQLDYNTAMKIEMDR 368
Query: 551 LEAWGHLT 558
E G T
Sbjct: 369 REKIGEST 376
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +++++ +P + A G + R E A+ +++AI+ N EA+ RG
Sbjct: 602 YNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNFEEAVEFYSKAIEKNSDFAEAYFNRG 661
Query: 457 QARAALGESVEAIQDLSKALE 477
R LG++ E DLSKA E
Sbjct: 662 LVRIFLGKTSEGTLDLSKAGE 682
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG L A+ +F + I+ NP A R R + +SV+ + + K +
Sbjct: 523 LMERGLLYMDVLNLNNALDNFNQVIRINPDYYIARFARAFTRYKMVQSVKEM-NTGKIPD 581
Query: 478 FEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+P + D L ++ I+ D+N ++DL V+++ + + A+ LG S + +
Sbjct: 582 EDPLAVSGAGDELSQQAIL-----DYNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNF 636
Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
++A E + KAI+ + +F EA+
Sbjct: 637 EEAVEFYSKAIEKNSDFAEAY 657
>gi|434402863|ref|YP_007145748.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
gi|428257118|gb|AFZ23068.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
Length = 907
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y AI+ +D+ ++ P A RG E AI+ + +AI+
Sbjct: 148 NRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFK 207
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG A LG EAI KA+EF+P+ + RG F A+
Sbjct: 208 PNDDTAWNNRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIAS 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ A+ G AL+ +G Y++A + KAI+ AW DL
Sbjct: 268 FDKAIEFKPNKDEAWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLG 327
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+ + + + +A+ RG+ L LG+ +KAIK
Sbjct: 328 RYEEAIASYDKAIEFKPDYHEAWFNRGIALFHLGREEKAIK 368
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 369 CVTRISKSKSISVDFRLS---RGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
V ++++ I D+ L+ RG+A Q+ E + A A F+Q + P E GRG
Sbjct: 60 AVKYLNQALVIQPDYILALARRGMAYKQLKETQLADAD--FEQSIALSPQNAEDWRGRGL 117
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A E AI+ + + I+ P AW RG A ALG EAI KA+EF+P+
Sbjct: 118 ALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDN 177
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RGIV ++ + + A+ ++ + +A+ G AL +G Y++A ++ KA
Sbjct: 178 IAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAITSYDKA 237
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I+ + AW + L ++A+ + + +A+ RG L+ LG++++
Sbjct: 238 IEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGKALNDLGRYEE 297
Query: 604 AIKDLSSGSRTMMP--HLIWN 622
AI P H WN
Sbjct: 298 AIASFDKAIE-FKPGDHYAWN 317
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +Y A+ +Q L P Y AL RG A +E + A +DF ++I +P
Sbjct: 48 GLASFRLERYQEAVKYLNQALVIQPDYILALARRGMAYKQLKETQLADADFEQSIALSPQ 107
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W+ RG A L EAI K +EF+P+ + RGI + + A+
Sbjct: 108 NAEDWRGRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYD 167
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ ++ A+ G+ L + Y+KA ++ KAI+ N AW + L
Sbjct: 168 KAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRY 227
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + + A++ RG L LG+ K+AI
Sbjct: 228 EEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAI 265
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ S + D+R RG+A ++ AI+ +D++++ P A RG A E
Sbjct: 102 IALSPQNAEDWR-GRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYE 160
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ + +AI+ P AW RG L +AI KA+EF+PN + RG
Sbjct: 161 EAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNA 220
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ + A+ ++ ++ +A+ G AL +G K+A + KAI+ N E
Sbjct: 221 LYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDE 280
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW + + DL E+A+ + + A++ +G +L LG++++AI
Sbjct: 281 AWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAI 333
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G Q++ G Y +A + F Q + +P P+ G G A + A+ +A+
Sbjct: 11 LQQGNDQLDRGNYQAAFATFQQAVTLEPPNPQVFYGLGLASFRLERYQEAVKYLNQALVI 70
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RRG A L E+ A D +++ P +A+ RG+ + + A+
Sbjct: 71 QPDYILALARRGMAYKQLKETQLADADFEQSIALSPQNAEDWRGRGLALDELERHEEAIA 130
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ ++ +A+ G+AL ++G Y++A ++ KAI+ + AWG +L
Sbjct: 131 SYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYEL 190
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EKA+ + + A++ RG L+ LG++++AI
Sbjct: 191 ERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAI 231
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+Y AI+ +D+ ++ P A RG A + AI+ F +AI+
Sbjct: 216 NRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG+A LG EAI KA+EF+P + +G V + A+
Sbjct: 276 PNKDEAWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIAS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
++ + A+ G+AL +G +KA ++ L+A
Sbjct: 336 YDKAIEFKPDYHEAWFNRGIALFHLGREEKAIKSWLEA 373
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ +G + + +AA + F +A+ P + + G A L EA++ L++A
Sbjct: 8 ETLLQQGNDQLDRGNYQAAFATFQQAVTLEPPNPQVFYGLGLASFRLERYQEAVKYLNQA 67
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +P+ L RG+ + K+ A D + L +N + GLAL + +++
Sbjct: 68 LVIQPDYILALARRGMAYKQLKETQLADADFEQSIALSPQNAEDWRGRGLALDELERHEE 127
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ K I+ + AW + L E+A+ + + + A+ RG++L
Sbjct: 128 AIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVL 187
Query: 596 HGLGQHKKAI 605
+ L +++KAI
Sbjct: 188 YELERYEKAI 197
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+D R +LE H+ I DK ++ P A+ +G A ALGR EEA++ ++K
Sbjct: 110 EDWRGRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKA 169
Query: 130 YE 131
E
Sbjct: 170 IE 171
>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1179
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A A + F Q+L+ +P + GRG A + + E AI F +AI+ N
Sbjct: 80 RGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIVSFDKAIEINS 139
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG+ AI KALE P+ I RG+ + A+
Sbjct: 140 DYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNLGKYEDAIASY 199
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
++++ N A+ GLAL+++G+Y+ A ++ KAI+++ +W L F D L
Sbjct: 200 DKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSW-ILRSFALDKLE 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
E+ + L Q L I+ A++ R + L LG+H++AI + + P + T
Sbjct: 259 KYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIK-INPD---DYTA 314
Query: 626 WRNLCF 631
WRN F
Sbjct: 315 WRNKGF 320
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N GKY AI+ +D+ ++ +P + I R A + E ++ +A++ N
Sbjct: 216 RGLALNNLGKYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINS 275
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RR LG+ EAI KA++ P+ +G V K + A+ L
Sbjct: 276 HEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSL 335
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K++ + G AL +G+Y +A ++ +AIQ++ + AW + L
Sbjct: 336 DQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSALDKLGK 395
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AL Q L I+ A++LRG L+ LG++++AI
Sbjct: 396 YSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAI 434
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G GKY AIS DQ LK +P I RG A + A++ + +AIQ N
Sbjct: 317 NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQIN 376
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG+ EA+ ++ALE + + RG + A+
Sbjct: 377 PDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITS 436
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLT 558
++++ ++ +A+ GLAL+ +G+Y+KA ++ KA++++ N W +L
Sbjct: 437 FDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLG 496
Query: 559 QFYQDLANSEKALEC---------------------------LQQVLYIDKRFSKAYHLR 591
++ + LA+ +KALE Q + I+ + A+ R
Sbjct: 497 KYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNR 556
Query: 592 GLLLHGLGQHKKAI 605
G L+ LGQ+++A+
Sbjct: 557 GFGLYNLGQYEEAL 570
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G Q++ G+ A+ IF Q + +P P+ L G G A + + ++ T+ +
Sbjct: 10 LQQGHEQLDRGQNQEALQIFQQAEQREPENPQVLFGLGLACYRLEQYQESVDYLTKTLDI 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG A L A D + L+ EP++ RG+ + K + A+
Sbjct: 70 EPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIV 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + A+ GLAL +G+Y+ A ++ KA++++ + + WG+ +L
Sbjct: 130 SFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNL 189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + + I+ KA+ RGL L+ LG+++ AI
Sbjct: 190 GKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYEDAI 230
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
E KR ++ V+ K+ I+ D+ + RG+A GKY +AI+ +D+ L+ +P +
Sbjct: 120 ELKRYEEAIVS-FDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKI 178
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG A + E AI+ + +AI+ NP+ +AW +RG A LG+ +AI KA+E
Sbjct: 179 WGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIE 238
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P R K + + V L +K++ A+ + L +G++++A
Sbjct: 239 INPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAI 298
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
++ KAI+++ + AW + L E+A+ L Q L I+ LRG L
Sbjct: 299 ASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDK 358
Query: 598 LGQHKKAI 605
LG++ +A+
Sbjct: 359 LGKYSEAL 366
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+R RG+A +Y AI FD+ ++ + Y A GRG A + E AI+ + +A
Sbjct: 110 DWR-GRGLALSELKRYEEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKA 168
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP + W RG A LG+ +AI KA+E PN+ +RG+ +
Sbjct: 169 LEINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYED 228
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++++ ++ AL + +Y++ + +A++++ + AW
Sbjct: 229 AIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGL 288
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L E+A+ + + I+ A+ +G +LH LG++++AI L
Sbjct: 289 DKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSL 335
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG N GKY AI+ FD++++ + A + RG A + E A++ + +A++ NP
Sbjct: 420 RGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINP 479
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G A LG+ +A+ KALE P+ +L+ R V ++ +
Sbjct: 480 NEYYTWNNQGNALFNLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSC 539
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++++ + A++ G L ++G+Y++A + KAI+++ ++ AW
Sbjct: 540 DQAIEINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAW 587
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A GKY+ A++ ++Q L+ + A RG + E AI+ F + I+
Sbjct: 384 INRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEI 443
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AW RG A LG+ +A+ KALE PN + +G F + A+
Sbjct: 444 NSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLGKYEKALA 503
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + + L ++G+Y + + +AI+++ ++ AW + +L
Sbjct: 504 SYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNRGFGLYNL 563
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
E+AL + + I+ + A+ RG L L +++KA K+ G + +
Sbjct: 564 GQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKAFKNWKDGIKNL 614
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRI-LDSLLAQ 65
+L K + + +D+ ++++S A R I L KL ++ ++ KAI+I D A
Sbjct: 256 KLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAW 315
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
N+ F +L ++ I D+AL+++P IL+GCA LG+ EAL+
Sbjct: 316 R-------NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALAS 368
Query: 126 WEKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTC-EYDVSN----SMSSLT 173
+ + Y +++ + L + + E L + Q + EY N ++++L
Sbjct: 369 YNQAIQINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLG 428
Query: 174 VSESGLNANDKMSETS 189
E + + DK+ E +
Sbjct: 429 KYEEAITSFDKVIEIN 444
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
++ + L K K + D+ + ++ + + R + LC+L +S+ I D Q+
Sbjct: 490 NALFNLGKYEKALASYDKALEINPDGYTVLNNRSGV--LCNLGKYSEMITSCD----QAI 543
Query: 68 EIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
EI NR F L ++ + C+KA++++P A+ +G A L R ++A
Sbjct: 544 EINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKA 603
Query: 123 LSVWEKG 129
W+ G
Sbjct: 604 FKNWKDG 610
>gi|427720396|ref|YP_007068390.1| hypothetical protein Cal7507_5215 [Calothrix sp. PCC 7507]
gi|427352832|gb|AFY35556.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 280
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 10/203 (4%)
Query: 374 SKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S K+IS+D + SRG+A + GK + AI+ ++Q ++ +P EA RG ARA Q
Sbjct: 81 SYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQ 140
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ D+ EAI+ P+ EA+ RG ARA+ G+ +A+ DL +A+ P A +
Sbjct: 141 NDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNN 200
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + +D A+ D + ++L+ AY G A ++ G+ + LK +Q
Sbjct: 201 RGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGD----KPGALKDLQRAA 256
Query: 549 NFLEAWGHLTQFYQDLANSEKAL 571
+ + + YQ + N+ K L
Sbjct: 257 DIFQNQDN-KDLYQQVMNNIKEL 278
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ +D+ + D Y A RG A + AI+D+ +AI+ NP+ EA+
Sbjct: 72 KGNLQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYN 131
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG ARA+ ++ A++D ++A+ PN A+ + RG D N A++DL ++L+
Sbjct: 132 SRGNARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLN 191
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G +S + K A + +AI+L+ NF A+ + + AL+
Sbjct: 192 PRYAIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGDKPGALKD 251
Query: 574 LQQVLYI 580
LQ+ I
Sbjct: 252 LQRAADI 258
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + + L+ AI+ + +AI + G A+K RG A LG+ EAI D ++A+ P
Sbjct: 65 QGQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINP 124
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + RG D AVED + ++L AY G A +S G+ KA +
Sbjct: 125 NDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDL 184
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L+ + A+ + +++ A+ Q + ++ F AY+ RG G
Sbjct: 185 GQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGD 244
Query: 601 HKKAIKDL 608
A+KDL
Sbjct: 245 KPGALKDL 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +S N AGE + + GQ + G AI KA+ + RG+
Sbjct: 43 EIGVSPPNRRTARNSKAGEFYVQ-GQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F + A+ D + ++++ + AY G A +S + + A E + +AI+L N+
Sbjct: 102 AYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + KAL+ L Q + ++ R++ AY+ RG + +K AI D +
Sbjct: 162 EAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQA 221
Query: 612 SRTMMPHL 619
R + P+
Sbjct: 222 IR-LNPNF 228
>gi|376005368|ref|ZP_09782882.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|423065278|ref|ZP_17054068.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
gi|375326295|emb|CCE18635.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|406713188|gb|EKD08360.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
Length = 754
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A + +AI+ +Q+++ +P +A RG A Q
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P+ EA++ RG A G + D ++A+ P SA + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + + ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAENYEAA 655
Query: 605 IKDLS 609
I D S
Sbjct: 656 IADYS 660
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+F + + DP+ EA + RG R + EAAI FT +IQ P EA+++R A
Sbjct: 351 FGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYY 410
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L + +AI D ++A++ +P + DI R + + +DF A+ DL+ ++L+ E+ A+
Sbjct: 411 DLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAF 470
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GLA S Y+ A + + I+ N EA+ + N + + + + +
Sbjct: 471 YQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRL 530
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + AY+ RG LG ++ A+ D
Sbjct: 531 NPESAAAYYNRGRARFHLGDYQGALAD 557
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI+ + Q +K DP P+ R A R+ AI+D + I+ NP +A+ +R
Sbjct: 414 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQR 473
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + AI D ++ + +PN+++ RG + K + A + D + ++L+ E
Sbjct: 474 GLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPE 533
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ +AY G A +G+Y+ A + + I + + EA+G+ Y +L N E A+E
Sbjct: 534 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIE 590
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+S+ + + L RG+ ++ G +AI F + ++ P EA R A ++ E
Sbjct: 357 LSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYE 416
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A + + AI DL++ + P D ++RG+
Sbjct: 417 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLA 476
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ N AY G A G + + +AI+L+
Sbjct: 477 HYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAA 536
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S
Sbjct: 537 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 593
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + EAAI+D+++AI N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIADYSQAISLN 666
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG EAI D ++A+ PN A + RG+V D A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726
Query: 506 LSACVKL 512
KL
Sbjct: 727 FEQAGKL 733
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +++ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIAD 658
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N G Y +AI + ++ +P + R A + +AAI D T+AI+ P+ +A
Sbjct: 580 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKA 638
Query: 452 WKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
RG +L E+ E AI D S+A+ PN A+ R + + +++ A+ D + +
Sbjct: 639 HSNRGLVH-SLAENYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAI 697
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKA 536
++ A+ G+ +S+G+ + A
Sbjct: 698 RIRPNLAGAFYGRGMVRASLGDRRGA 723
>gi|429124529|ref|ZP_19185061.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
gi|426279540|gb|EKV56562.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
Length = 357
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F+ +++ DP Y A G + E AI+ +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYN 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A+ G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEIFPN-VHTYNNIGLIKNDLGLY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ AVE + LD AY +GL+ ++ Y +A E K I+LD + A+ ++
Sbjct: 156 DEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
QDL +ALE + L +DK + KAY+ RG+
Sbjct: 216 INQDLKLHREALEYFNKALVLDKNYYKAYYNRGV 249
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K I +D R ++ G+++ N Y A+ F+++++ D A G +
Sbjct: 164 KVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGIINQDLKLH 223
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ F +A+ + + +A+ RG + L A+ D + E EPN +RG
Sbjct: 224 REALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFNICAELEPNYFPTYCKRGE 283
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V FK K++ ++ED + ++ + +K Y Y+G + +Y A +K I + N +
Sbjct: 284 VKFKLKNYRESLEDFNKYIEHREADKKIYFYIGFCGYKLKDYNNA----IKYINMSYNNI 339
Query: 552 EAW 554
+ +
Sbjct: 340 KTF 342
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
++++ K + + +S +I + RG+ + A++D +++D + +AY +GL
Sbjct: 22 KSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIGLV 81
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY------------ 561
++G Y++A + KA+ LD N ++A+ ++ ++Y
Sbjct: 82 KHNLGLYEEAINYYNKALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEIFPNVHT 141
Query: 562 --------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
DL ++A+E ++V+ +D R++KAY+ GL + L + +A++
Sbjct: 142 YNNIGLIKNDLGLYDEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALE 194
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y A+ F +++ D Y +A G ++ + + A+ F + I+ +
Sbjct: 146 GLIKNDLGLYDEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSK 205
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G L EA++ +KAL + N + RG+ + + + A+ D +
Sbjct: 206 NIYAYNNIGIINQDLKLHREALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFN 265
Query: 508 ACVKLD 513
C +L+
Sbjct: 266 ICAELE 271
>gi|91774230|ref|YP_566922.1| tetratricopeptide protein [Methanococcoides burtonii DSM 6242]
gi|91713245|gb|ABE53172.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
6242]
Length = 573
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 3/235 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ IS DF + ++G A N +Y AI +D+ ++ DP + +G A +
Sbjct: 235 KAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 294
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ +P +G A L EAI+ KA+E + + +G
Sbjct: 295 DEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGN 354
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+F + +N A+E +++D + S G AL ++ +Y +A E + KAI++D +F
Sbjct: 355 AHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFS 414
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
WG+ +L ++A+EC + L I F + +G L L ++ +AI+
Sbjct: 415 SYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIE 469
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N KY AI +D+ ++ + +G A + AI + +AI+ +
Sbjct: 215 NKGDALCNLEKYDEAIGCYDKAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEID 274
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +G A L + EAI+ KA+E +P+ + + +G + +N A+E
Sbjct: 275 PDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIEC 334
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G A ++ +Y KA E + KAI++D +F + +L
Sbjct: 335 YDKAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLE 394
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+EC + + ID FS + +G L L +H +AI+
Sbjct: 395 KYDEAIECYDKAIEIDPDFSSYWGNKGDALCNLERHDEAIE 435
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ +S DF + ++G A N KY AI +D+ ++ DP + +G A +
Sbjct: 337 KAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 396
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ +P W +G A L EAI+ KALE + + +G
Sbjct: 397 DEAIECYDKAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGN 456
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +N A+E +++ + S + G AL + Y +A E + KA+++D N
Sbjct: 457 ALCNLERYNEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDD 516
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
+AW + N E+AL L + + +D
Sbjct: 517 DAWYASASIFSKNGNKEEALYRLAKSIELD 546
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYAS-AISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ + + K+ +++F +N K + + + + L+ +P +G A
Sbjct: 164 INSLERRKNTNLEFDSDAATIFLNIEKIVNLELDYYTKALEHNPDNDSYWSNKGDALCNL 223
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + +AI+ + W +G A L EAI+ KA+E +P+ + +
Sbjct: 224 EKYDEAIGCYDKAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNN 283
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + ++ A+E +++D + S G AL ++ Y +A E + KAI++
Sbjct: 284 KGDALCNLEKYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMST 343
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+F W + + +L KA+EC + + ID FS + +G L L ++ +AI+
Sbjct: 344 DFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIE 401
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D S +G A N +Y AI +D+ ++ + +G A +
Sbjct: 303 KAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGNAHFNLEKY 362
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI + +AI+ +P +G A L + EAI+ KA+E +P+ + +G
Sbjct: 363 NKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYWGNKGD 422
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+E +++ + G AL ++ Y +A E + K +++ +F
Sbjct: 423 ALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIECYDKTLEIYPDFS 482
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI------ 605
W + L +A+EC + L +D A++ + G ++A+
Sbjct: 483 SCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASASIFSKNGNKEEALYRLAKS 542
Query: 606 -----KDLSSGSRTMMPHLIWNLTRWRNL 629
D +S L+W+ +R++ L
Sbjct: 543 IELDDSDKNSAMNDQDFELLWDDSRFKEL 571
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICNR---AFCYSQLELHKHVIRDCDKALQLDPTL 102
LC+L + +AI D + + CN A C LE + I DKA+++DP
Sbjct: 254 LCNLERYDEAIECYDKAIEIDPDFSSYCNNKGDALC--NLEKYDEAIECYDKAIEIDPDF 311
Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQF 143
KG A L R EA+ ++K A+ S D +
Sbjct: 312 SSYCNNKGDALCNLERYNEAIECYDK----AIEMSTDFDMY 348
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 93/163 (57%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + Y AI+ F++ ++ DP+ A RG A + + + AI+D+ EAI+
Sbjct: 517 LNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRL 576
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG AR+ E +AI D ++A+ +P +A+ R I + KD++ A+
Sbjct: 577 DPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAIT 636
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
D + +++D ++ S+++ G A S +Y KA + +AIQL+
Sbjct: 637 DFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLN 679
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +Y AI+ +++ ++ DP A RG A + + + + AI+D+ EAI+
Sbjct: 143 FNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRL 202
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + + + I D ++A+ +P+ A R + +D++ +
Sbjct: 203 DPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIA 262
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD ++ SAY G A S G+ KA + + I+LD A+ + +
Sbjct: 263 DYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQK 322
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ +KA+ + + +D + AY +G G+H KAI D + R + P W
Sbjct: 323 GDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIR-LDPTNTW 378
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+R A + +Y AI+ ++I++ DP A RG A ++E + AI+D EAI+
Sbjct: 381 LNRSHAWSEKEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRL 440
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A E +AI D +KA+ +P + RG + +D++ A+
Sbjct: 441 DPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIA 500
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD SAY G A S +Y KA KAI+LD A+ + +
Sbjct: 501 DFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQK 560
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+KA+ + + +D + AY RG +H KAI D + R
Sbjct: 561 EGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIR 609
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + ++ AI+ F++ ++ DP A RG A + + + AI+DF EAIQ
Sbjct: 449 LNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQL 508
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A + + +AI D +KA+ +P +A RG + + ++ A+
Sbjct: 509 DPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIA 568
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD N AY G A S E+ KA + +AI++D A+ + +
Sbjct: 569 DYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRK 628
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ +KA+ + + ID + + ++ RG + KAI D +
Sbjct: 629 KDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEA 675
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + Y I+ +++ ++ DP R A + + + + I+D+ EAI+
Sbjct: 211 FNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRL 270
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + G+ +AI D ++ + +P + RG + D + A+
Sbjct: 271 DPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIA 330
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + SAY G A GE+ KA +AI+LD A+ + + + +
Sbjct: 331 DFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEK 390
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+KA+ +++ +D + + AY RG +H KAI D + R + P W
Sbjct: 391 EEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIR-LDPTNAW 446
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A + ++ AI+ ++ ++ DP A + RG A + E + AI+DF +AI+
Sbjct: 415 FKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRL 474
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A + +AI D ++A++ +PN RG + D++ A+
Sbjct: 475 DPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIA 534
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFY 561
D + ++LD N AY G A S Y KA + +AI+LD N A+ GH
Sbjct: 535 DFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKT 594
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q+ +KA+ + + ID + + AY R + + KAI D + R
Sbjct: 595 QE---HDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIR 643
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +G AI+ +++ ++ DP A RG A + +L+ AI+DF EAI+
Sbjct: 279 FNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRL 338
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ +G A GE +AI D ++A+ +P + R + ++++ A+
Sbjct: 339 DPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIA 398
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--Q 562
D + ++LD +N AY G A E+ KA +AI+LD AW +L + Y
Sbjct: 399 DANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDP--TNAWAYLNRGYAWD 456
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ +KA+ + + +D + AY RG + KAI D +
Sbjct: 457 EKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEA 505
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ +D+ ++ +P A RG A + ++E + AI+D+ EAI+ +P A+ RG A +
Sbjct: 125 IAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWS 184
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +AI D ++A+ +P+ A RG K KD++ + D + ++LD ++ Y
Sbjct: 185 QKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTY 244
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A S +Y K + +AI+LD + A+ + + + +KA+ + + +
Sbjct: 245 FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRL 304
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
D + AY RG + G KAI D R
Sbjct: 305 DPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIR 337
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A +G++ AI+ F++ ++ DP A + R A + + E + AI+D E I+
Sbjct: 347 VNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIADANEIIRL 406
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ +RG A E +AI D ++A+ +P +A RG + ++ + A+
Sbjct: 407 DPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAIT 466
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD N AY G A +Y KA +AIQLD N+ A+ + +
Sbjct: 467 DFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQK 526
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +KA+ + + +D + AY RG + KAI D + R
Sbjct: 527 NDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIR 575
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E I+++ EAI+ NP+ A+ RG A + E +AI D ++A+ +P H RG
Sbjct: 122 EEDIAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGY 181
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D++ A+ D + ++LD ++ SAY G A S +Y K + +AI+LD +
Sbjct: 182 AWSQKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDA 241
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + + +K + + + +D + AY RG G KAI D +
Sbjct: 242 PTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNET 301
Query: 612 SR 613
R
Sbjct: 302 IR 303
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A+ ++ AI+ +++ ++ DP A I R + +++ + AI+DFTEAI+
Sbjct: 585 LNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIRI 644
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFKFKDF 499
+P + RG A + + +AI D ++A++ P A + R + +++D
Sbjct: 645 DPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKLASAYNNRAWIWATCPGEQYRDG 704
Query: 500 NAAVEDLSACVKLDKENKSAY-TYLGLALSSIGEYKKAEEAHLKAIQL 546
AVE +L E ++Y + L A + +G++ KA E K +L
Sbjct: 705 QKAVESAHLAWELSGEEITSYLSTLAAAYAELGDFVKAVEWQEKMTKL 752
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 18 KTICEIDELVRVDSVMASAITARI-------ELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
KTI + +E +R+D ASA R +L K ++ ++++ IR LD +Y
Sbjct: 259 KTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDK--AIADYNETIR-LDPTNTPAY--- 312
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR + ++Q I D D+A++LDP AY+ +GCA+ G ++A++
Sbjct: 313 --FNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIA 364
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 14 NKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYE 68
N K I + +E +R+D ASA R +K ++ ++++AIR LD A +Y
Sbjct: 187 NDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIR-LDPDDAPTY- 244
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NRA +SQ E + I D ++A++LDP AY +G A+S G ++A++
Sbjct: 245 ----FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIA 296
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
K I + +E +R+D A A R + ++ +++KAIR LD +Y
Sbjct: 429 KAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIR-LDPTNTWAY----- 482
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR + + Q E + I D ++A+QLDP AY+ +G A+S ++A++ + K
Sbjct: 483 FNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKA 539
>gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 717
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP-MYPEALIGRGTA 424
++ ++ ++ D+ ++G+ ++ + +AI+ FD L+ P +YP A + RG
Sbjct: 468 AISSFDRAITLKPDYFQAWYNKGLLLMHLDRPDAAITTFDNALELQPKLYP-AWVNRGNL 526
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ +AAI+ + +A+ P+ EAW RG A LG +A+ +AL + + A
Sbjct: 527 LLQEGRWDAAIASYDQALAIQPNVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAK 586
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ G+ + + A+ S + ++ + GLAL ++G Y++A +AI
Sbjct: 587 TWNHHGVTLIQLGRYQDALISFSNALDHQPDDPETWNNRGLALDNLGRYEEAMVCFEQAI 646
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ ++ +AW + ++L E+A+ Q L ++ + +A++ RGL L LG+ ++A
Sbjct: 647 ELNSDYAQAWNNRGVALRNLGREEEAILSFDQALELNPDYPEAWNNRGLALRHLGREEEA 706
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y A++ ++ K P YPEA RG A LE AI+ + +A+Q
Sbjct: 250 NRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLK 309
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W RG A +LG EA+ A F P+ A+ + +G+ + + NAA+
Sbjct: 310 PDDYATWGNRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIAC 369
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L L + A+ Y G L +G A + +A L +++EAW L
Sbjct: 370 LDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQ 429
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ CL +V+ + +A+ RG +L L + + AI
Sbjct: 430 RPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAI 469
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ R+ + + RG + AIS FD+ + P Y +A +G
Sbjct: 437 CLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHL 496
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+AAI+ F A++ P AW RG G AI +AL +PN A+
Sbjct: 497 DRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWAN 556
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGI K + A++ + L ++ + + G+ L +G Y+ A + A+
Sbjct: 557 RGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISFSNALDHQP 616
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ E W + +L E+A+ C +Q + ++ +++A++ RG+ L LG+ ++AI
Sbjct: 617 DDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWNNRGVALRNLGREEEAI 673
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +N G+ A++ FDQ + Y EA +G A+ + +A+ P
Sbjct: 149 QGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQP 208
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E W ++G L +A+ KA+ +P++ + + RG+V F + AV
Sbjct: 209 NDYEVWFQQGNTCYRLERLDDALASYEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSC 268
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
KL A+ + G AL S+G + A ++ +A+QL + WG+ L
Sbjct: 269 EKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLKPDDYATWGNRGSALYSLGR 328
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ Q Y + +++A++++GL L Q AI
Sbjct: 329 YREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAI 367
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R N G+Y A++ Q P Y +A +G E A++ F +A N
Sbjct: 114 NRASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLN 173
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAWK +G L EA+ +A+ +PN ++ ++G ++ + + A+
Sbjct: 174 HDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALAS 233
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ GL L + Y +A + KA +L N+ EAW H L
Sbjct: 234 YEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLG 293
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ Q L + + RG L+ LG++++A+
Sbjct: 294 RLEDAIASYDQALQLKPDDYATWGNRGSALYSLGRYREAV 333
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI G+Y AI+ F++ + P PE G +AA++++ +AI
Sbjct: 11 LQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAALTNYEKAITL 70
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G LG +A+ +A +F P+ A R + + A+
Sbjct: 71 KPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGNRASTLYNLGQYEEALA 130
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ A+ GL L + G ++A + +A L+ ++LEAW H +L
Sbjct: 131 SCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFNL 190
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRG 592
+AL+ QQ + + + + +G
Sbjct: 191 NRYTEALDSWQQAVSLQPNDYEVWFQQG 218
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W ++G +G EAI KA +F PN +I G F F+AA+ + +
Sbjct: 10 WLQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAALTNYEKAIT 69
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L + A+ G L +G + A ++ +A Q + + AWG+ +L E+AL
Sbjct: 70 LKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGNRASTLYNLGQYEEAL 129
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
QQ + + +A++++GL+L G+ ++A+ +
Sbjct: 130 ASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQAT 170
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + K L RG G A AI+ Q P Y EA +G A
Sbjct: 369 CLDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQL 428
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+ ++ P EAWK RG L +AI +A+ +P+ +
Sbjct: 429 QRPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYN 488
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G++ +AA+ ++L + A+ G L G + A ++ +A+ +
Sbjct: 489 KGLLLMHLDRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQP 548
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N EAW + + L + AL+ Q L + +K ++ G+ L LG+++ A+
Sbjct: 549 NVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISF 608
Query: 609 SSG 611
S+
Sbjct: 609 SNA 611
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+Y A+S +P Y EA +G A + AAI+ +A
Sbjct: 318 NRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALK 377
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG +AI +A +P+ + +GI + + + A+
Sbjct: 378 PDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQRPHEAIAC 437
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L V+L E+ A+ + G L + + A + +AI L ++ +AW + L
Sbjct: 438 LDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHLD 497
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ A+ L + + A+ RG LL G+ AI
Sbjct: 498 RPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAI 537
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + EG++ +AI+ +DQ L P EA RG A + A+ + +A+
Sbjct: 521 VNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWANRGIALEKLGRYQDALDSYDQALVL 580
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ W G LG +A+ S AL+ +P+ + + RG+ + A+
Sbjct: 581 QSDDAKTWNHHGVTLIQLGRYQDALISFSNALDHQPDDPETWNNRGLALDNLGRYEEAMV 640
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L+ + A+ G+AL ++G ++A + +A++L+ ++ EAW + + L
Sbjct: 641 CFEQAIELNSDYAQAWNNRGVALRNLGREEEAILSFDQALELNPDYPEAWNNRGLALRHL 700
Query: 565 ANSEKALECLQQV 577
E+A +Q
Sbjct: 701 GREEEANASFEQA 713
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +A++ +++ + P Y EA +G LE A++ + +A Q NP AW
Sbjct: 55 GWFDAALTNYEKAITLKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGN 114
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R LG+ EA+ +A +P+ + +G+V A+ L+
Sbjct: 115 RASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNH 174
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ + G L ++ Y +A ++ +A+ L N E W L + AL
Sbjct: 175 DYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALASY 234
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + + +A++ RGL+L L ++ +A+
Sbjct: 235 EKAITLQPDAPEAWNNRGLVLFHLTRYTEAV 265
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG+A N G+ AI FDQ L+ +P YPEA RG A R RE EA S F +A
Sbjct: 658 NRGVALRNLGREEEAILSFDQALELNPDYPEAWNNRGLALRHLGREEEANAS-FEQANMK 716
Query: 445 N 445
N
Sbjct: 717 N 717
>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 754
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A + +AI+ +Q+++ +P +A RG A Q
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P+ EA++ RG A G + D ++A+ P SA + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + + ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 655
Query: 605 IKDLS 609
I D S
Sbjct: 656 IADYS 660
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+F + + DP+ EA + RG R + EAAI FT +IQ P EA+++R A
Sbjct: 351 FGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYY 410
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L + +AI D ++A++ +P + DI R + + +DF A+ DL+ ++L+ E+ A+
Sbjct: 411 DLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAF 470
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GLA S Y+ A + + I+ N EA+ + N + + + + +
Sbjct: 471 YQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRL 530
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + AY+ RG LG ++ A+ D
Sbjct: 531 NPESAAAYYNRGRARFHLGDYQGALAD 557
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI+ + Q +K DP P+ R A R+ AI+D + I+ NP +A+ +R
Sbjct: 414 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQR 473
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + AI D ++ + +PN+++ RG + K + A + D + ++L+ E
Sbjct: 474 GLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPE 533
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ +AY G A +G+Y+ A + + I + + EA+G+ Y +L N E A+E
Sbjct: 534 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIE 590
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+S+ + + L RG+ ++ G +AI F + ++ P EA R A ++ E
Sbjct: 357 LSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYE 416
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A + + AI DL++ + P D ++RG+
Sbjct: 417 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLA 476
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ N AY G A G + + +AI+L+
Sbjct: 477 HYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAA 536
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S
Sbjct: 537 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 593
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 666
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG EAI D ++A+ PN A + RG+V D A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726
Query: 506 LSACVKL 512
KL
Sbjct: 727 FEQAGKL 733
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 658
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N G Y +AI + ++ +P + R A + +AAI D T+AI+ P+ +A
Sbjct: 580 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKA 638
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
RG + + AI D S+A+ PN A+ R + + +++ A+ D + ++
Sbjct: 639 HSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIR 698
Query: 512 LDKENKSAYTYLGLALSSIGEYKKA 536
+ A+ G+ +S+G+ + A
Sbjct: 699 IRPNLAGAFYGRGMVRASLGDRRGA 723
>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 329
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G G+ A+ +D+ L+ +P Y +A +G + E ++ + +A++ N
Sbjct: 82 NKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKYEESLKYYNKALELN 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW + LG+ E + K LE P D + +G+ + + + A++
Sbjct: 142 PKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKS 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KLD+ + SA G+ +G+Y KA E K ++L+ N +E G+ +++L
Sbjct: 202 YDMVLKLDETDLSAINNKGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++L C ++L ++ ++ +GL L LG+H +AIK +
Sbjct: 262 KFPESLNCFNKLLKLNPNDKMGWYHKGLALEKLGKHVEAIKSFDN 306
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 382 DFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
DF+ L++G+ +N+GKY ++ D+ L+ DP E L +G A + E +I
Sbjct: 6 DFKKRSLLNKGVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKC 65
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F + ++ + AW +G A LG+ +A++ KALE P D + +G
Sbjct: 66 FDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKG------- 118
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
GL L+ +G+Y+++ + + KA++L+ +L+AW +
Sbjct: 119 --------------------------GL-LTKLGKYEESLKYYNKALELNPKYLKAWNNK 151
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L E+ L C ++L ++ + ++ +G+ L + +++A+K
Sbjct: 152 AVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALK 200
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A GK+ +I FD++L+ D A +G A + A+ + +A++ N
Sbjct: 48 SKGVALKELGKFEESIKCFDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEIN 107
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G LG+ E+++ +KALE P + + +V K +
Sbjct: 108 PKYFDAWNNKGGLLTKLGKYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNC 167
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ E+ + G++L + Y++A +++ ++LD L A + +++L
Sbjct: 168 FDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELG 227
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
KALEC +VL ++ + +G+ LG+ +++
Sbjct: 228 KYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESL 267
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 77/156 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK+ ++ FD+IL+ +P + +G + + A+ + ++ + + A
Sbjct: 159 GKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINN 218
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG+ +A++ K LE PN + + +GI + F ++ + +KL+
Sbjct: 219 KGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNP 278
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+K + + GLAL +G++ +A ++ +++LD +F
Sbjct: 279 NDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDPDF 314
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ GKY A+ FD++L+ +P E + +G + +++ F + ++ N
Sbjct: 218 NKGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLN 277
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
P+ W +G A LG+ VEAI+ +L+ +P+
Sbjct: 278 PNDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDPD 313
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 63/151 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I + D ++G++ Y A+ +D +LK D A+ +G
Sbjct: 167 CFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKEL 226
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ F + ++ NP+ E +G LG+ E++ +K L+ PN +
Sbjct: 227 GKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPNDKMGWYH 286
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ K A++ +KLD + + A
Sbjct: 287 KGLALEKLGKHVEAIKSFDNSLKLDPDFEPA 317
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 3 KRKLLDSRYRL---NKTHKTICEIDELVRVDS----VMASAITARIELAKLCSLRNWSKA 55
KR LL+ +L K +++ +D+ + +D ++ S A EL K + ++
Sbjct: 9 KRSLLNKGVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGK------FEES 62
Query: 56 IRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFS 114
I+ D +L ++ N + F +++L + ++ DKAL+++P A+ KG +
Sbjct: 63 IKCFDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLT 122
Query: 115 ALGRKEEALSVWEKGYE 131
LG+ EE+L + K E
Sbjct: 123 KLGKYEESLKYYNKALE 139
>gi|440683182|ref|YP_007157977.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428680301|gb|AFZ59067.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 534
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K + ++ ++L G+ G Y AI + Q + + Y +A RG A + A
Sbjct: 270 KHQDANIYYKL--GLVYHQLGDYKKAIIDYSQAINININYSQAYNKRGLAHYQLGNYQTA 327
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I D+ +AI+ NP ++ R +AR+ +G+ AI+D ++A++ P A R I +
Sbjct: 328 IEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRY 387
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D V + +K+ ++ AY G G Y+ A E + +AIQ++ N+ +A+
Sbjct: 388 LLDDQQKLVPE----IKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYADAY 443
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + DL N E A++ +V+ + ++ AY+ RG + +G + AI+D +
Sbjct: 444 YNRGNAHSDLGNYEAAIDDFSKVIKVKSNYTDAYYNRGNVRLIIGDKQGAIEDFQQAADL 503
Query: 615 MMPH 618
H
Sbjct: 504 YWQH 507
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
NS I + G F+ D+ AA+ + + ++ ++ + Y LGL +G+YKKA +
Sbjct: 238 NSTLIYEKLGDKYFQKGDYAAAINNYNQALQDKHQDANIYYKLGLVYHQLGDYKKAIIDY 297
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ N+ +A+ + L N + A+E Q + I+ + Y R +G
Sbjct: 298 SQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGD 357
Query: 601 HKKAIKDLS 609
H+ AI+D +
Sbjct: 358 HQGAIEDYN 366
>gi|428772227|ref|YP_007164015.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
gi|428686506|gb|AFZ46366.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
Length = 697
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSIS-----VDFRLSRGIAQVNEGKYASAISIFDQILKED 411
E N A + V I S ++ VD +RGI+ G+Y AI+ +++I++ D
Sbjct: 417 ELGNRAYDRGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELD 476
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P Y A RG A F E E AI+D+ +A+ +P+ A+ G LGE +AI +
Sbjct: 477 PRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIE 536
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + + + + RGI N+ D+ ++ D + + LD E+ +A G + ++
Sbjct: 537 YDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLE 596
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A + + I+LD ++ A+ + Y+ N ++A+ Q+ L ++ +++
Sbjct: 597 LYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNPNHLDSHNNM 656
Query: 592 GLLLHGLGQHKKAIK 606
L +G ++AI+
Sbjct: 657 ALSYEKMGNIQRAIE 671
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI + L++DP Y +A RG + E E AI+D+ ++ +P A+
Sbjct: 426 GSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAYYN 485
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LGE AI D +A+ +P + G + A+ + + LD
Sbjct: 486 RGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDN 545
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
K+A+ G+A ++G+Y+++ + + + LD A + Y +L ++A+
Sbjct: 546 SYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQAMADY 605
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+V+ +D + AY+ RG + +++AI D
Sbjct: 606 NRVIELDPDYQIAYYNRGNVYRVRENYQRAIAD 638
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 52/299 (17%)
Query: 361 EAKRNKKF-----CVTRISKSKSI----SVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
E++ NK+F + + K + + S D RG + Y +A+ F +++ D
Sbjct: 272 ESRINKRFQTVDEVLEALDKVEDVVAQSSADLYFERGNYYLELQDYKNALDCFQNVIRID 331
Query: 412 PMYPEALIGRGTARAFQRELE---------------------AAISDFTEAIQS------ 444
P Y A R A +L+ AI+ + S
Sbjct: 332 PSYGFAYQRRDFAHQQLAKLDRKGNLSWRLKKVLQLSPFVAFGAIALYALLPTSGRMVDV 391
Query: 445 -NPSAGEA---------------WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
NP E+ + G G AI S AL +PN D +
Sbjct: 392 VNPVEAESVEVNSRDFSDLLPSRYYELGNRAYDRGSYDVAIIHYSSALRQDPNYVDAYNN 451
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGI ++ A+ D ++LD AY G A +GEY++A + +A+ LD
Sbjct: 452 RGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLDP 511
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ +L Y+DL EKA+ V+ +D + A++ RG+ + LG ++++I+D
Sbjct: 512 TYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRD 570
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI +D ++ D Y A RG A + E +I D TE + + A
Sbjct: 528 GEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALIN 587
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L +A+ D ++ +E +P+ + RG V +++ A+ D + L+
Sbjct: 588 RGNSYFNLELYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNP 647
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+ ++ + L+ +G ++A E + +AI L+ N+ A +L +
Sbjct: 648 NHLDSHNNMALSYEKMGNIQRAIEGYQRAIALNPNYQLAIDNLNRL 693
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + N Y A++ ++++++ DP Y A RG + + AI+D+ +++
Sbjct: 586 INRGNSYFNLELYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDL 645
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
NP+ ++ + +G AI+ +A+ PN
Sbjct: 646 NPNHLDSHNNMALSYEKMGNIQRAIEGYQRAIALNPN 682
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NR Y L ++ I D ++ ++LDP ++AY +G A+ LG E A++ + +
Sbjct: 451 NRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLD 510
Query: 130 --YEHALHQSADLKQFLELEE 148
Y HA + + + L EE
Sbjct: 511 PTYTHAYYNLGNTYRDLGEEE 531
>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 710
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY + + +D+ ++ P Y EA GRG A ++ + AI+ F A++ P AW+ R
Sbjct: 395 KYQESQAAYDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGR 454
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G EAI KA++F+PN + RG + K K ++ AVE V++ +
Sbjct: 455 GDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFD 514
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A+ LG + + ++A EA+ KA++ NF + W + E+A+E +
Sbjct: 515 NYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVEAYE 574
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + + +A++ G H L ++++AI+
Sbjct: 575 KAVKLKPDYYQAWYNLGWSYHELRKYEQAIE 605
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ FD LK P Y A GRG + E AI+ + +A+Q P+ AW RGQA
Sbjct: 433 AIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAH 492
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A++ KA+E + ++ + + G V + A E V+
Sbjct: 493 QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQG 552
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL + +++A EA+ KA++L ++ +AW +L Y +L E+A+EC + L
Sbjct: 553 WYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALD 612
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A++ RG L +++ A+
Sbjct: 613 LNPKEYQAWYNRGNAQSNLKRYEDAL 638
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N ++ A++ +++ + P Y E + ++ + + + + AI+
Sbjct: 351 NRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQAAYDRAIELK 410
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A L +S EAI AL+ +P+ A RG V + + A+
Sbjct: 411 PEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIAS 470
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ A+ G A + +Y +A E++ KA+++ + EAW +L + +L
Sbjct: 471 YEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELN 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+++A E ++ + F + ++ +G+ L + +H++A++
Sbjct: 531 KNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + ++ A+ +++ +K P Y +A G + R+ E AI + A+ N
Sbjct: 555 SKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLN 614
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A++ L +A+ ++A+ +P+ ++ + RG K + A+
Sbjct: 615 PKEYQAWYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAIAS 674
Query: 506 LSACVKLDKENKSA 519
++ + +A
Sbjct: 675 YDKAIRYKPDYGAA 688
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F +A L+ RG + F A+ + L + + L + +Y++++
Sbjct: 341 FNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQ 400
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
A+ +AI+L +LEAW + L S++A+ L I ++ A+ RG +L
Sbjct: 401 AAYDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLD 460
Query: 598 LGQHKKAI 605
++++AI
Sbjct: 461 SQRYEEAI 468
>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 329
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +G Y AI+ + Q++ PE RG + + + AI+D+ +AI NP
Sbjct: 47 QGTAYAAQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIALNP 106
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A A G +AI D S+A+ P +A + RG K ++ A+ D
Sbjct: 107 KFASAYNNRGVAYYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADY 166
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ ++ +AY G+ G+Y +A + H +AI L+ A+ + Y
Sbjct: 167 TQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKGQ 226
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ Q + ++ + + AY+ RG+ G + +AI
Sbjct: 227 YNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAI 265
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGI + +G Y AI+ +DQ + +P + A RG A + + AI+D ++A+ N
Sbjct: 80 SRGIVYIKKGDYDRAIADYDQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALN 139
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + AI D ++A+ P RG++ K ++ A++D
Sbjct: 140 PKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDD 199
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + +AY G+A + G+Y +A +AI L+ A+ + Y D
Sbjct: 200 HTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKG 259
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ +A+ + + +D +++AY+ + +
Sbjct: 260 DYTRAIVTYNRAIALDPHYAEAYYQKAV 287
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+GTA A Q + + AI+ +++ I E + RG G+ AI D +A+ P
Sbjct: 47 QGTAYAAQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIALNP 106
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A + RG+ + ++ A+ D S V L+ +N AY G A +Y +A +
Sbjct: 107 KFASAYNNRGVAYYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADY 166
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI L+ + A+ + Y+ ++A++ Q + ++ + + AY+ RG+ GQ
Sbjct: 167 TQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKGQ 226
Query: 601 HKKAIKDL 608
+ +AI D
Sbjct: 227 YNRAIADF 234
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y AI+ + Q + +P + A RG + + + AI D T+AI
Sbjct: 148 NRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALE 207
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A G+ AI D +A+ P A + RGI D+ A+
Sbjct: 208 PKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVT 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ + LD AY +A G +A E++ K I
Sbjct: 268 YNRAIALDPHYAEAYYQKAVACEKAGRLPEAAESYHKFI 306
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +G+Y AI+ FDQ + +P A RG A + + AI + AI +
Sbjct: 216 NRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALD 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
P EA+ ++ A G EA + K + +
Sbjct: 276 PHYAEAYYQKAVACEKAGRLPEAAESYHKFILY 308
>gi|397780661|ref|YP_006545133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939163|emb|CCJ36418.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
MS2]
Length = 627
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D L+RG A N G+ A++ +D+++ +P EA + RGT A R +AAI +
Sbjct: 188 ADAWLTRGHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDR 247
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I +P AW RG + L +A+ +AL + AD RG K +
Sbjct: 248 VIALDPGNANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYE 307
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV + + + GLAL ++ Y++A + + +A + + + W H
Sbjct: 308 EAVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMA 367
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ L + AL C + L + + +H +GL+L L +++KAI+ R H
Sbjct: 368 LKRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADH 425
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 1/255 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + ++ L+RG + +Y +AI +D+++ DP A RGT +
Sbjct: 210 CYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGTIQVLL 269
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
A+ + +A+ + + W RG+ A L EA++ +AL P A+ L+
Sbjct: 270 SRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYN 329
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ + + A++ + + + + + +AL + Y A +A++ +
Sbjct: 330 RGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRYDLALICFDRALRENA 389
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E W +L EKA+EC Q L + A + RG + LG ++ A+ +
Sbjct: 390 IDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYALGNYEAAVANY 449
Query: 609 SSGSRTMMPHLI-WN 622
+ R + + WN
Sbjct: 450 QTVVRATPENAVAWN 464
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 7/238 (2%)
Query: 363 KRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
KR K++ C R + +I + +G+ N +Y AI FDQ L+ +P A
Sbjct: 369 KRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGA 428
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG + EAA++++ +++ P AW G A L E + +ALE
Sbjct: 429 CYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLERYEETLVCYERALE 488
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + + + + V ++ A+ ++ + N A+ GLAL +G Y +A
Sbjct: 489 IDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKKGLALFILGRYGEAV 548
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ +A++ D +E W + SE+ALEC + L + + A LRG+ +
Sbjct: 549 TCYARALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPDDADA--LRGMTM 604
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A FDQ ++ DP RG A + + A +A++ P +AW R
Sbjct: 135 RYREAAECFDQGIRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTR 194
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +G + +A+ + + EP + RG V + ++AA++ + LD
Sbjct: 195 GHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPG 254
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N +A+ G + Y A +++ +A+ +D + W + L E+A+
Sbjct: 255 NANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFD 314
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ L + ++ + RGL L L ++++AI RT
Sbjct: 315 RALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRT 353
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A+ FD+ L P E L RG A E AI + A ++N
Sbjct: 295 TRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTN 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W + A L A+ +AL +I H +G+V F K + A+E
Sbjct: 355 PDLAGIWYHKAMALKRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIEC 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L ++ A Y G + ++G Y+ A + ++ AW + L
Sbjct: 415 FDQALRLRADHPGACYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLE 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+ L C ++ L ID ++ + +L L + KA+
Sbjct: 475 RYEETLVCYERALEIDPVNRGVWNNKANVLSILSHYDKAL 514
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E W R+G+A G+ AI+ +AL+ N+A + +G V + A E
Sbjct: 85 SAEDWCRKGRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFD 144
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++D + + G AL + Y++A E +A++L + +AW ++++ +
Sbjct: 145 QGIRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTRGHAFRNMGRT 204
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLL 595
AL C +V+ I+ +A+ RG +L
Sbjct: 205 TDALACYDRVVTIEPGRIEAWLARGTVL 232
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A G+Y +A E + +A++L+ N AW H + +A EC Q + ID
Sbjct: 93 GRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFDQGIRIDPD 152
Query: 584 FSKAYHLRGLLLHGLGQHKKA 604
+ + RG L+ L +++A
Sbjct: 153 CVRLWAARGQALYRLQHYQEA 173
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 70/153 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y + +++ L+ DP+ + + + A+ + + +++NP +AW ++
Sbjct: 475 RYEETLVCYERALEIDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKK 534
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EA+ ++ALE +P +I +G + A+E + + + +
Sbjct: 535 GLALFILGRYGEAVTCYARALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPD 594
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ A + +AL S+ +A + + + +L R
Sbjct: 595 DADALRGMTMALISLDRSAEAVKYYERLQRLPR 627
>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
Length = 345
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + + E AI +T+AI+ P A+ RG A +G+ EA+++ ++A+ P
Sbjct: 100 GYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPE 159
Query: 482 SADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + GIV ++ K D AV ++++ EN++ Y LG + +YKKA E +
Sbjct: 160 DPDYYYNLGIV-YRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECY 218
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KA++++ F W +L Y D+ + EKA++ ++ L IDKR ++ Y G+ L LG+
Sbjct: 219 KKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGR 278
Query: 601 HKKAIK 606
+ +A+K
Sbjct: 279 YDEALK 284
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 369 CVTR-ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
C T+ I ++V + +RG+A G Y A+ +++ + +P P+ G
Sbjct: 115 CYTKAIEIKPDLAVAY-YNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYRI 173
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ +L+ A++ + +AI+ NP + G + + +A++ KA+E P
Sbjct: 174 KGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKAVEINPLFFLGWQ 233
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G D+ AV+ +K+DK + Y +G+AL +G Y +A +A+ KA Q++
Sbjct: 234 NLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRYDEALKAYEKAEQIN 293
Query: 548 RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYID 581
+ L+A + Y + EKAL+ L++ ID
Sbjct: 294 PD-LKALSLYNKACLYASKGDKEKALKLLKESFSID 328
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
K E P +IL+ + +++F + A E L + LDK N +Y YLG G
Sbjct: 18 KKAESYPYPENILY-KAVIHFHTGNNIKAKELLKKYINLDKNNPESYYYLGSIYLEEGNP 76
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+KA + KA++ + E + L Y + EKA++C + + I + AY+ RGL
Sbjct: 77 EKAVKYLKKAVEKGKK-AEYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGL 135
Query: 594 LLHGLGQHKKAIKDLS 609
+G + +A+K+ +
Sbjct: 136 AFKKMGDYDEAVKNYN 151
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP E++ G G +A++ L KA+E + A+ ++ G F D A
Sbjct: 57 KNNP---ESYYYLGSIYLEEGNPEKAVKYLKKAVE-KGKKAEYFNDLGYAYFLKGDPEKA 112
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++ + +++ + AY GLA +G+Y +A + + +AI L+ + + +L Y+
Sbjct: 113 IKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYR 172
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +KA+ C ++ + I+ Y+ G + + + +KKA+
Sbjct: 173 IKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAV 215
>gi|384209207|ref|YP_005594927.1| hypothetical protein Bint_1731 [Brachyspira intermedia PWS/A]
gi|343386857|gb|AEM22347.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 357
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AIS F++++ D Y A G + E AI +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLVKHNLGMYEEAIDYYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + +A+ G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ +Y +A E K ++LD + ++ ++
Sbjct: 156 EEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
QDL +ALE + L +DK +SKAY+ RG
Sbjct: 216 IKQDLKQHSEALEYFNKALALDKNYSKAYYNRG 248
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + + +++ A+ F++ L D Y +A RG + E A+ DF ++ P+
Sbjct: 214 GIIKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPN 273
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A +RG+ + L EA++D + +E I + RG +K KD+N A++D +
Sbjct: 274 YYPACCKRGEVKLKLKNYREALEDFNYYIEHSNPDKQIYYYRGFCKYKLKDYNNAIKDFN 333
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ N KY A+ F+++L+ D + G + ++ A+ F +A+ + +
Sbjct: 180 GLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGIIKQDLKQHSEALEYFNKALALDKN 239
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG + L A+ D ++ LE EPN +RG V K K++ A+ED +
Sbjct: 240 YSKAYYNRGLSELELELYECALYDFNRCLELEPNYYPACCKRGEVKLKLKNYREALEDFN 299
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++ +K Y Y G + +Y A
Sbjct: 300 YYIEHSNPDKQIYYYRGFCKYKLKDYNNA 328
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 458 ARAALG--ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A A G + ++++ K + + +S +I + RG+ + A+ D + +D E
Sbjct: 11 ANKAFGSADYKKSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAE 70
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY- 561
+AY +GL ++G Y++A + + KA+ LD ++A+ ++ ++Y
Sbjct: 71 YVNAYNNIGLVKHNLGMYEEAIDYYKKALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYI 130
Query: 562 -------------------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
DL E+A+E +V+ +D + KAY+ GL + L ++
Sbjct: 131 KAIEISPNVHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYD 190
Query: 603 KAIK 606
+A++
Sbjct: 191 EALE 194
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI F + I+ + +
Sbjct: 113 GLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L + EA++ +K LE + + + GI+ K + A+E +
Sbjct: 172 YIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGIIKQDLKQHSEALEYFN 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ LDK AY GL+ + Y+ A + ++L+ N+ A + L N
Sbjct: 232 KALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPNYYPACCKRGEVKLKLKNY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
+ALE + + Y+ RG + L + AIKD + + L+ ++++
Sbjct: 292 REALEDFNYYIEHSNPDKQIYYYRGFCKYKLKDYNNAIKDFNMSHNNIKTFLLKIISKF 350
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG QR L+ A++D+ +AI+ P +AW RG G++ AI+DLS+AL +P
Sbjct: 147 RGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDP 206
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N RG K +V D ++LD + Y GL+L+++GEY KA +
Sbjct: 207 NRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADY 266
Query: 541 LKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L NF G +L AL + L ++ F++ Y+ R +L +
Sbjct: 267 DQALRLAPRPNFFANRGDSYHLKGELG---AALSDYEAALKLEPNFAQTYNNRAVLYKKM 323
Query: 599 GQHKKAIKDLSSGSR 613
G+ KKA+ D + R
Sbjct: 324 GERKKALADYETALR 338
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G +AI + L+ DP P + RG A +LE +++D EAI+ +P
Sbjct: 181 RGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDP 240
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------NSADILHERGIVNFKFKDFN 500
E + RG + AA+GE +AI D +AL P N D H +G +
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANRGDSYHLKG-------ELG 293
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
AA+ D A +KL+ Y + +GE KKA + A++LD
Sbjct: 294 AALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKKALADYETALRLD 340
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G+Y AI+ +DQ L+ P P RG + + EL AA+SD+ A++
Sbjct: 248 NRGLSLAAMGEYDKAIADYDQALRLAPR-PNFFANRGDSYHLKGELGAALSDYEAALKLE 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
P+ + + R +GE +A+ D AL +P +
Sbjct: 307 PNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGN 343
>gi|157872758|ref|XP_001684907.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 847
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 18/292 (6%)
Query: 355 LKETSNEAKRNKKFC------VTRISKSKSISVDF-------RLSRGIAQVNEGKYASAI 401
L T +A N+ FC TR + + ++D + GI+ ++G +A A
Sbjct: 438 LSPTHFKALFNRAFCEDKLMNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGNHARAT 497
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
F + ++ D +P+ RG + Q AAI+D+T A+ +P ++ R +
Sbjct: 498 QAFTRAIELDDRHPDFYHNRGFTQRKQGAYAAAIADYTTAVSLDPKHFKSHYNRAYCFSK 557
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ D + AL+ + N+A+ H RG + AAVED + ++L+ + A
Sbjct: 558 LGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFNRALRLNPKLTFALN 617
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQF-YQDLANSEKALECLQQVLY 579
GL + +Y KA +AI+LD RN AW H + Y+++ E A+ +
Sbjct: 618 ARGLVYDQLQQYDKALADFTEAIRLDQRN--SAWLHNRGYTYRNMGKLELAIADYSASIK 675
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ AY R LG+++ AI+D + R P + + R CF
Sbjct: 676 LAPHSHTAYTNRAFAFRKLGRYEAAIEDYTKALRE-HPGVATKVLNNRAYCF 726
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y RG + ELEAAI +T A++ +P+ +A R L AI+D +
Sbjct: 408 YAHDFYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLMNYTRAIEDYT 467
Query: 474 KALEFEPNS----------------------------------ADILHERGIVNFKFKDF 499
AL+ +P + D H RG K +
Sbjct: 468 AALDLDPRNPFTHYNLGISYDHKGNHARATQAFTRAIELDDRHPDFYHNRGFTQRKQGAY 527
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ D + V LD ++ ++ S +G Y++A + A+Q+D N A+ +
Sbjct: 528 AAAIADYTTAVSLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGA 587
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
L E A+E + L ++ + + A + RGL+ L Q+ KA+ D + R +
Sbjct: 588 ALAQLGRLEAAVEDFNRALRLNPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNS 647
Query: 620 IWNLTR---WRNL 629
W R +RN+
Sbjct: 648 AWLHNRGYTYRNM 660
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N GK AI+ + +K P A R A AF++ EAAI D+T+A++
Sbjct: 652 NRGYTYRNMGKLELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTKALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +AI+D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEAPSTANSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 37 ITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKAL 96
T R + A ++ +++ A+ + Y NRA+C+S+L ++ + D AL
Sbjct: 519 FTQRKQGAYAAAIADYTTAVSLDPKHFKSHY------NRAYCFSKLGRYEEAVADYAAAL 572
Query: 97 QLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
Q+D AY +G A + LGR E A+ + +
Sbjct: 573 QIDSNNANAYHNRGAALAQLGRLEAAVEDFNRA 605
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQETDRIVHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFT+ +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTDVLQRKPGHQRAHYERAACYARLDDFCSAIADYEAALQLD 157
>gi|119487888|ref|ZP_01621385.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
gi|119455464|gb|EAW36602.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
Length = 614
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 137/330 (41%), Gaps = 18/330 (5%)
Query: 276 QSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISD 335
Q S +F +AS+ E Q N +H KL SD S + SN + +S ++
Sbjct: 171 QDSINFLTQEASASQASIEELKQLQLNLIESLH-KLKSDFKSKDHSNLIQFPGANNSHNN 229
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
+ S F W + + S + D L +G A N+
Sbjct: 230 LPKRNQLNSNFPSEFDWSF-----------------QFNSSPDLIADDYLKQGEALNNDK 272
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ A+ F++ K +P EA +G A+ + + +Q +P EAW R
Sbjct: 273 RYSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYNR 332
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA++ AL +PN + H RG + KFK ++ A+ +++
Sbjct: 333 GNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQPN 392
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ G L + Y++A ++ +AI +D E W + L E+A+ +
Sbjct: 393 KYETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASFE 452
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + +D + +++R LLH LG++ +AI
Sbjct: 453 QAIGLDPTSPELWNMRASLLHQLGRYSEAI 482
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ + D E + R A + E AI+ F +AI +P++ E W R
Sbjct: 409 RYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASFEQAIGLDPTSPELWNMR 468
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
LG EAI A+E +PN + +G V + K ++ A+E + + E
Sbjct: 469 ASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAITIQPE 528
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ + GL + +Y A A+ +AI+L N EAW L N ++A+ L
Sbjct: 529 ASEAWRHKGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRFRGALLSKLKNYQEAISSLG 588
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 589 KAISIQKEL 597
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG V +Y+ A+ +D L P EA RG R F+R + A++ + +A++
Sbjct: 331 NRGNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKR-YDEALTSYDKALEI 389
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ E W RG L EAI +A+ + ++ R + K K + A+
Sbjct: 390 QPNKYETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIA 449
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ LD + + L +G Y +A ++ AI+ N EAW L
Sbjct: 450 SFEQAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQL 509
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ALE ++ + I S+A+ +GLL L Q+ AI
Sbjct: 510 KQYSEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPDAI 550
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y+ AI F+ ++ P EA +G+G+ ++ A+ + +AI P A EAW+
Sbjct: 476 GRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAITIQPEASEAWRH 535
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L + +AI +A++ +PN A+ RG + K K++ A+ L + + K
Sbjct: 536 KGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRFRGALLSKLKNYQEAISSLGKAISIQK 595
Query: 515 ENKSA 519
E +S
Sbjct: 596 ELRSV 600
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G V +Y+ A+ +++ + P EA +G + AI+ + +AI+
Sbjct: 500 LGKGSVLVQLKQYSEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPDAIAAYDQAIKL 559
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P+ EAW+ RG + L EAI L KA+ +
Sbjct: 560 QPNDAEAWRFRGALLSKLKNYQEAISSLGKAISIQ 594
>gi|392966968|ref|ZP_10332386.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
[Fibrisoma limi BUZ 3]
gi|387843765|emb|CCH54434.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
[Fibrisoma limi BUZ 3]
Length = 445
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 114/225 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N + AI +D+ ++ + A + RG +++ Q + A+ DF+ AI+ N
Sbjct: 65 NRGLAKANLKDHRGAILDYDRAIELNAKDALAYLSRGVSKSKQDDHRGALLDFSRAIELN 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG +R+ L + A+ D SK +E EPN+A L+ RGI K +D+ ++ D
Sbjct: 125 PDDPQTYYSRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLAD 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ A+ G++ + +Y A AI+L E++ + L
Sbjct: 185 FSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLD 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + AL + L ++ +AY+ RG LG K AI+D ++
Sbjct: 245 DYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNT 289
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG+++ + + A+ F + ++ +P P+ RG +R+ + A++DF++ I+
Sbjct: 98 LSRGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRLEQHRGALADFSKTIEL 157
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ A RG + L + ++ D SK LE P A RG+ + KD+ A+
Sbjct: 158 EPNNALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIA 217
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
DL++ ++L E+ +Y Y G A + + +YK A + + + L+ + A+
Sbjct: 218 DLNSAIELGPEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFRAY 267
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + YA +++ F ++L+ +P +A GRG ++ ++ AI+D AI+
Sbjct: 167 ARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELG 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E++ RG A+A L + A+ D ++ L ++ + RG K D A++D
Sbjct: 227 PEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQD 286
Query: 506 LSACVKLDKENKSAYTYL------------------------------------GLALSS 529
+ ++ + N A Y ++ +
Sbjct: 287 FNTAIEANNSNTDAKVYYNGKITRAILDNLRNLVQERNKINDLSDERAEAYYSRAVSKNK 346
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ K A KAI+L + EA+ L + + A+ L + ++ R+++ Y+
Sbjct: 347 QGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYY 406
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
+RG++ H LG DLS
Sbjct: 407 VRGIIKHALGDENGGCLDLS 426
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 6/228 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+++ ++ A++ F + ++ +P AL RG + + +++DF++ ++ N
Sbjct: 133 SRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+ A+E P A+ + RG K D+ A+ D
Sbjct: 193 PRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQFY 561
+ + L+ +N AY G S +G+ K A + AI+ + + +A G +T+
Sbjct: 253 YNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAIEANNSNTDAKVYYNGKITRAI 312
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D N ++ ++ + ++AY+ R + + G K AI DL+
Sbjct: 313 LD--NLRNLVQERNKINDLSDERAEAYYSRAVSKNKQGDAKAAIVDLN 358
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA R ++ Q + +AAI D +AI+ +P+ EA+ G ++A G+ A+ DL+ A
Sbjct: 335 EAYYSRAVSKNKQGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSA 394
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++ P A++ + RGI+ D N DLS +L
Sbjct: 395 IKLNPRYAEVYYVRGIIKHALGDENGGCLDLSKAGEL 431
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA E GI K DF A++ S + ++ EN ++Y GLA +++ +++ A +
Sbjct: 25 SAADFFENGITRSKTGDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYD 84
Query: 542 KAIQLDRNFLEAWGHLTQFY----QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+AI+L N +A +L++ QD + AL + + ++ + Y+ RG+
Sbjct: 85 RAIEL--NAKDALAYLSRGVSKSKQD--DHRGALLDFSRAIELNPDDPQTYYSRGVSRSR 140
Query: 598 LGQHKKAIKDLS 609
L QH+ A+ D S
Sbjct: 141 LEQHRGALADFS 152
>gi|404475555|ref|YP_006706986.1| hypothetical protein B2904_orf895 [Brachyspira pilosicoli B2904]
gi|404437044|gb|AFR70238.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
Length = 318
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +KL+ AY G+A +G+YK+A E + KAI+L+ N
Sbjct: 223 FNKAIKLNPNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPN 266
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ + D+ + RG+ + + G AI FD+ L DP +A +G
Sbjct: 151 AIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLE 210
Query: 426 ---AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
F +E AI DF +AI+ NP+ A+ RG A+ LG+ EAI+D KA+E EPN+
Sbjct: 211 DELGFYKE---AIKDFNKAIKLNPNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPNT 267
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A + ++RG V + A++D ++LD +N+ A
Sbjct: 268 AYLYNDRGWVKKNAGLYKEALKDYKKALELDPDNEYA 304
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 424 ARAFQRELEAAISD-------FTEAIQS----------NPSAGEAWKRRGQARAALGESV 466
A+AF EL +SD FT + + N + + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKKHFIVSFTNIVDNEKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I K A+E+ ++L + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYYNRGLL 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G ++A + KA+ +D N +A+ + +L ++A++ + + ++ ++
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYAL 235
Query: 587 AYHLRGLLLHGLGQHKKAIKD 607
AY+ RG+ LGQ+K+AI+D
Sbjct: 236 AYNNRGIAKDELGQYKEAIED 256
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G ++ E AI + EAI+ NP+ +A+ + A+ L EAI++ KA+E
Sbjct: 104 KGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRA 163
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG++ A++D + +D AY GL +G YK+A +
Sbjct: 164 DYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDF 223
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+L+ N+ A+ + +L ++A+E + + ++ + Y+ RG + G
Sbjct: 224 NKAIKLNPNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGL 283
Query: 601 HKKAIKD 607
+K+A+KD
Sbjct: 284 YKEALKD 290
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A + I KL L+ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKA 226
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I D L +Y N+ +L +K I+D +KA++L+P AY
Sbjct: 185 AIKDFDKALSI-DPNLFDAYN-----NKGLLEDELGFYKEAIKDFNKAIKLNPNYALAYN 238
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A LG+ +EA+ ++K E
Sbjct: 239 NRGIAKDELGQYKEAIEDYDKAIE 262
>gi|428768755|ref|YP_007160545.1| hypothetical protein Cyan10605_0355 [Cyanobacterium aponinum PCC
10605]
gi|428683034|gb|AFZ52501.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
aponinum PCC 10605]
Length = 539
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 346 SKLSFKWDMLKETSNEAKRNKK----FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
S L K+D LK+ S +C ++ K+ SI L R IA+ G A+
Sbjct: 206 SYLDQKYDYLKQASLHNNHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAKWKIGSQQGAL 265
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +Q + P Y A RG + + + AI D+TE I+ NP + A+ RR
Sbjct: 266 ADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEIKINPLSIYAYYRRALCYEK 325
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
++A +D S+ L N + RG + ++ D A+ED ++L+ AY
Sbjct: 326 TNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGALEDYRKALQLNPSLAKAYY 385
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L + + +GE +A + AI L N+++A+ +L Y DL +A+ + +D
Sbjct: 386 NLAIIYNDLGEINQAIYNYKSAINLVPNYVKAYYNLAIIYVDLGKYRQAIIHYDKACELD 445
Query: 582 KRFSKAYHLRGLLLHGLGQHKK 603
F +A + + LL L Q K+
Sbjct: 446 NEFIQAKYNKQFLLEYLRQEKQ 467
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G Y SAI +DQ+LK + + + + R A+ W
Sbjct: 223 NHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAK--------------------------W 256
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
K +G A+ DL++A+ P H RG + +K + + A+ D + +K+
Sbjct: 257 K--------IGSQQGALADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEIKI 308
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + AY L KA E + + + L+ N + + + +L + E ALE
Sbjct: 309 NPLSIYAYYRRALCYEKTNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGALE 368
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
++ L ++ +KAY+ ++ + LG+ +AI + S ++P+ +
Sbjct: 369 DYRKALQLNPSLAKAYYNLAIIYNDLGEINQAIYNYKSAI-NLVPNYV 415
>gi|414076416|ref|YP_006995734.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
90]
gi|413969832|gb|AFW93921.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
90]
Length = 689
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + R++ +I + ++G + +Y A++ +++ + P YP+AL G+G A
Sbjct: 320 FMLNRLNNKNAIEL---YNQGNTLIQLQRYQEALATYEKAIDIKPDYPQALYGQGKALFQ 376
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + ++ + +AIQ P+ EAW RG L EAI + KAL+ + + I
Sbjct: 377 LKKYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + K +N A++ + +N + GLA ++ +Y++A A+ K ++L
Sbjct: 437 LKGDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELK 496
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ AW +L +L E AL+ Q + ++ S A+ R +L L ++ +AI
Sbjct: 497 PDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDS 556
Query: 608 LSSGSRT 614
+ +T
Sbjct: 557 FTQVIKT 563
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY ++ +DQ ++ P Y EA RG + AI+ +A+Q + W+ +
Sbjct: 379 KYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLK 438
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + +AI+ +A+ F+ ++ ++ +++G+ K + A+ V+L +
Sbjct: 439 GDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPD 498
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++SA+ LG L ++ Y+ A +A+ +A+Q ++N AW + L +A++
Sbjct: 499 HESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFT 558
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG-SRTMMPHLIW 621
QV+ + + +A++ RG LH + ++ +AI+ S +L+W
Sbjct: 559 QVIKTNPQQYQAWYNRGWALHQVKRYGEAIESYKKAISLKSNDYLVW 605
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 361 EAKRNKKFCVTRISK-SKSI-SVDFRLS-----------RGIAQVNEGKYASAISIFDQI 407
EA N+ F + R+ + S++I +VD L +G + +Y AI ++Q
Sbjct: 399 EAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLKGDIFIKISQYNDAIKAYEQA 458
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ PE +G A ++ E AI+ + + ++ P AW G L
Sbjct: 459 INFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPDHESAWYNLGNCLVNLNRYEF 518
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+Q +A+++ N++ R + + ++ A++ + +K + + A+ G AL
Sbjct: 519 ALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQAWYNRGWAL 578
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ Y +A E++ KAI L N W +L +L ++A+ + ++
Sbjct: 579 HQVKRYGEAIESYKKAISLKSNDYLVWYNLGNTQYNLQKYQEAIASYNKATRYKPNHYES 638
Query: 588 YHLRGLLLHGLGQHKKAI 605
++ +G L Q+++AI
Sbjct: 639 WYSKGNAWLNLQQYQQAI 656
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 7/193 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N +Y AI+ + + ++ P + A G E A+ + +A+Q N
Sbjct: 472 KGLAFQNLKQYEEAITAYKKTVELKPDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQ 531
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW R L EAI ++ ++ P + RG + K + A+E
Sbjct: 532 NNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQAWYNRGWALHQVKRYGEAIESY 591
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE-------AWGHLTQ 559
+ L + + LG ++ +Y++A ++ KA + N E AW +L Q
Sbjct: 592 KKAISLKSNDYLVWYNLGNTQYNLQKYQEAIASYNKATRYKPNHYESWYSKGNAWLNLQQ 651
Query: 560 FYQDLANSEKALE 572
+ Q +A+ +KA+E
Sbjct: 652 YQQAIASYDKAIE 664
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
VN +Y A+ +DQ ++ + A + R R AI FT+ I++NP +A
Sbjct: 511 VNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQA 570
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A + EAI+ KA+ + N + + G + + + A+ + +
Sbjct: 571 WYNRGWALHQVKRYGEAIESYKKAISLKSNDYLVWYNLGNTQYNLQKYQEAIASYNKATR 630
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++ G A ++ +Y++A ++ KAI+ ++ +A
Sbjct: 631 YKPNHYESWYSKGNAWLNLQQYQQAIASYDKAIEYKPDYQQA 672
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQL---DPTLLQ 104
SL + +AI+I Q ++ NR F +L+ + I DKALQL DP + Q
Sbjct: 383 SLIAYDQAIQI------QPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD--------------LKQFLELEELL 150
LKG F + + +A+ K YE A++ AD LKQ+ EE +
Sbjct: 437 ---LKGDIFIKISQYNDAI----KAYEQAINFQADNPELWYKKGLAFQNLKQY---EEAI 486
Query: 151 TAAKQDRSVTCE-----YDVSNSMSSLTVSESGLNANDKMSETSENH 192
TA K+ + + Y++ N + +L E L A D+ + ++N+
Sbjct: 487 TAYKKTVELKPDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNN 533
>gi|255036666|ref|YP_003087287.1| hypothetical protein Dfer_2907 [Dyadobacter fermentans DSM 18053]
gi|254949422|gb|ACT94122.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 471
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 4/227 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAI 442
+RG+A+ N Y A+ +D+ ++ +P EAL RG +++ Q + +AI D+++AI
Sbjct: 88 FNRGLAKANLKDYRGAMGDYDRAIELNP--KEALYYQSRGVSKSLQDDYRSAIDDYSKAI 145
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP +A+ RG + A L A+ DL AL P+ L+ RG +++ +
Sbjct: 146 ELNPEEPKAYYNRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGS 205
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++L + AY GLA +G+Y+ A +AI+L N E + +
Sbjct: 206 LADFTRVIELSPKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKT 265
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L + + A+ + + +D AY+ RG L + AI DLS
Sbjct: 266 KLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLS 312
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ + +A+ D L +P AL RG + +E +++DFT I+ +
Sbjct: 157 NRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGSLADFTRVIELS 216
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ A D ++A+E PN ++ + RG+ K +DF A+ D
Sbjct: 217 PKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKTKLEDFQGAILD 276
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD EN +AY G A + + + A KAI++ + Y
Sbjct: 277 YDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEVKNAY--TGDPKKNAYIGKI 334
Query: 566 NSEKALECLQQV---LYIDK---RFSKAYHLRGLLLHGLGQHKKAIKDLS 609
N EK E QV + IDK ++AY+ R + +G+ K A+ DL+
Sbjct: 335 NKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAKSKVGELKGALADLT 384
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 38/262 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + +YA +++ F ++++ P A GRG A+ + + A +DFT AI+ +
Sbjct: 191 ARGNCKQDLQEYAGSLADFTRVIELSPKRTGAYAGRGLAKLELGDYQGAAADFTRAIELS 250
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG A+ L + AI D K ++ + + + + RG K D A+ D
Sbjct: 251 PNDSEYYNNRGLAKTKLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIAD 310
Query: 506 LSACV--------------------------------------KLDKENKSAYTYLGLAL 527
LS + KL E AY +A
Sbjct: 311 LSKAIEVKNAYTGDPKKNAYIGKINKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAK 370
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S +GE K A A++L + A+ + A+ + + + +A
Sbjct: 371 SKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLRSDYPEA 430
Query: 588 YHLRGLLLHGLGQHKKAIKDLS 609
Y+LRG++ + LG+ DLS
Sbjct: 431 YYLRGIVKNSLGEINDGCLDLS 452
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA R A++ EL+ A++D T A++ +P+ A+ R R+A G+ + A+ D + +
Sbjct: 361 EAYYARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSS 420
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
++ + + + RGIV + N DLS +L + AY +G
Sbjct: 421 IKLRSDYPEAYYLRGIVKNSLGEINDGCLDLSKAGELGYQ--QAYKVIG 467
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G +A G+ A+Q + + P+ A RG+ KD+ A+ D ++L+ +
Sbjct: 57 GNTKAGTGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAMGDYDRAIELNPK 116
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G++ S +Y+ A + + KAI+L+ +A+ + Y L N AL L
Sbjct: 117 EALYYQSRGVSKSLQDDYRSAIDDYSKAIELNPEEPKAYYNRGVSYAKLKNHRNALVDLD 176
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L ++ A + RG L ++ ++ D +
Sbjct: 177 HALSLNPDELAALYARGNCKQDLQEYAGSLADFT 210
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA+ G+ A++ ++ P Y A R R+ + A+ DFT +I+
Sbjct: 365 ARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLR 424
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
EA+ RG + +LGE + DLSKA E
Sbjct: 425 SDYPEAYYLRGIVKNSLGEINDGCLDLSKAGEL 457
>gi|225620792|ref|YP_002722050.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215612|gb|ACN84346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 605
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 386 SRGIAQV----NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+RGI + NEG A+ +++ ++ +P Y E RG + + +E +I D+ +A
Sbjct: 363 NRGICKEKLKDNEG----ALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYNKA 418
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ EA+ RG + L ++ A++D +KA+E PN +++ + RG + KD
Sbjct: 419 IQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEG 478
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ED ++L+ + Y G A +++G A AI+L+ N++EA+
Sbjct: 479 ALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAY 531
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +++ F+ + + P+ RG + ++ E A+ D+ +AIQ NP+ E + R
Sbjct: 339 EYDKSLNYFNYSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNR 398
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + LG E+I+D +KA++ PN ++ + RG++ + KD A+ED + ++L+
Sbjct: 399 GNVKIYLGNMEESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPN 458
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G + + + A E + KAI+L+ N E + + +L N + A+
Sbjct: 459 LSEVYNNRGTIKEILKDNEGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFD 518
Query: 576 QVLYIDKRFSKAYHLR 591
+ ++ + +AY R
Sbjct: 519 NAIELNPNYVEAYFNR 534
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ Y AI ++ ++ +P + A G +E + +++ F +I N
Sbjct: 297 GTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFNYSISLNNK 356
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG + L ++ A++D +KA++ PN +++ + RG V + +++D +
Sbjct: 357 EPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYN 416
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY GL + + + A E + KAI+L+ N E + + + L ++
Sbjct: 417 KAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDN 476
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
E ALE + + ++ S+ Y+ RG LG A+ D +
Sbjct: 477 EGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNA 520
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A GTA+ + + AI +AI+ NP A+ G A+ E +++ +
Sbjct: 289 YAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFN 348
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++ + RGI K KD A+ED + ++L+ Y G +G
Sbjct: 349 YSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNM 408
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+++ + + KAIQL+ N+ EA+ + + L ++E ALE + + ++ S+ Y+ RG
Sbjct: 409 EESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGT 468
Query: 594 LLHGLGQHKKAIKD 607
+ L ++ A++D
Sbjct: 469 IKEILKDNEGALED 482
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEG A+ +++ ++ +P E RGT + ++ E A+ D+ +AI+ NP+ E +
Sbjct: 442 NEG----ALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEGALEDYDKAIELNPNDSEFY 497
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
RG A+ LG A+ D A+E PN + R I
Sbjct: 498 YNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNRYI 536
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 35/173 (20%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK----- 535
N A + G ++ K ++ A+E L+ ++L+ + AY LGL +I EY K
Sbjct: 288 NYAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYF 347
Query: 536 -----------------------------AEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A E + KAIQL+ N+ E + + L N
Sbjct: 348 NYSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGN 407
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
E++++ + + ++ +S+AY+ RGLL L ++ A++D + + P+L
Sbjct: 408 MEESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIE-LNPNL 459
>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
HF4000_097M14]
Length = 503
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++K K+++ + I + A ++ + LK +P + E + G+ A +
Sbjct: 1 MNKKKNLTTKETFALAIQNHQKNNLQVAEKLYKETLKTNPNHIETIFLLGSLSAQTNNFD 60
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A F + IQ NP+ A G A LGE +AI KA++ PN A+ + GI
Sbjct: 61 KAKKFFKKVIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIA 120
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ ++++ +A+ LG+ +GE KKA + KAIQ++ N +
Sbjct: 121 FKELGELKKAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVA 180
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A +L +++L +KA+ C Q+ + I+ A++ GL+ +GL + KKAI
Sbjct: 181 AHNNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAI 233
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+++ +P + A G A E + AI + +AIQ NP+ A G A LGE
Sbjct: 69 VIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELK 128
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+AI KA++ PN A+ + GIV + + A+ ++++ + +A+ LG+
Sbjct: 129 KAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIV 188
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+GE KKA + KAIQ++ N + A +L + L+ +KA+ C ++ + I +S
Sbjct: 189 FKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSD 248
Query: 587 AY 588
AY
Sbjct: 249 AY 250
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI + + ++ +P Y A G A EL+ AI + +AIQ NP+ A
Sbjct: 91 GEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYN 150
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LGE +AI KA++ PN + GIV + + A+ ++++
Sbjct: 151 LGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINP 210
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +A+ LGL + E KKA + KAIQ+ N+ +A+ +L D+ ++AL L
Sbjct: 211 NHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSDAYWNLHSLASDI---DEALTIL 267
Query: 575 QQVLYIDKRFSKA 587
+++ D +F KA
Sbjct: 268 KKLYEFDNKFIKA 280
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 9/256 (3%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ ++ +V F L +G + + A+ +F+ +L+ DP EA G A A +
Sbjct: 1121 IALNQRSTVAF-LYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPK 1179
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++ F A++ + AW +G+ LG+ EA+ +ALE EP ++ + RG+
Sbjct: 1180 DALAAFESALKIRDTFAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVA 1239
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K F A+E ++ D N Y + G+ALS +G Y++A +A +A+ D
Sbjct: 1240 LSKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENAL 1299
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + L ++A+ ++ L + R+S+A +G+ L+ LG++ AI+D
Sbjct: 1300 VYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRDF---D 1356
Query: 613 RTMM--PHLIWNLTRW 626
RT+ PH N W
Sbjct: 1357 RTIAENPH---NFHAW 1369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 8/271 (2%)
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
D SD+ ++ K M +E K F T + + V F +G+A
Sbjct: 3266 DPVFSDALFAKGKALLTLGMFREAV------KTFDKTLLIEKNYAGVYFH--KGLALAEL 3317
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ AI+ FD+ + D +A +G + A +L A+ F IQ++P + + W
Sbjct: 3318 GRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLH 3377
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG +AI KALE P +AD + G + ++ A+ + L
Sbjct: 3378 RGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQG 3437
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E A+ Y G L ++G+Y +A A+ + L EA+ H L + A+
Sbjct: 3438 EFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAF 3497
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q L + FS + +G+ L L +HK AI
Sbjct: 3498 DQALRLRPNFSYIWTGKGMALAALDRHKDAI 3528
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 34/259 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GIA V GK+ AI+ ++ L++ P A +G + A + E A+ F ++
Sbjct: 690 IHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQRFEEAVRSFERVLEI 749
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N A+ ++G A A LG+ +EAI +ALE +P++ L+++GI + + ++ A++
Sbjct: 750 NRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAIK 809
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD----------------- 547
+ L+ EN A YLG+A + + +A A +++++D
Sbjct: 810 TFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVEC 869
Query: 548 -------RNF-----LEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
R+F L+A T +YQ +A E+A+ L + +D S A+
Sbjct: 870 DRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTY 929
Query: 591 RGLLLHGLGQHKKAIKDLS 609
G+ L LG+H +A+ L+
Sbjct: 930 LGISLARLGRHDEAVAALN 948
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ GK +A+ FD +++ DP + + RG A AIS + +A++ P
Sbjct: 3344 KGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGP 3403
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW G++ AL EAI +AL+ + A+ + +G F + AV
Sbjct: 3404 TNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAY 3463
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L ++ A+ + G+AL + A A +A++L NF W L
Sbjct: 3464 DSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDR 3523
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ A+ C + + +D++ S+AY+ GL LG+++ AI++ + T++ H
Sbjct: 3524 HKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEA---TLVQH 3572
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A + G+Y+ A++ +D+ LK P YP+A+ +G A A E A+ +F A+ NP
Sbjct: 421 GLASASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPG 480
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ ++GQ G EA++ L+K++ +P++A + +++G K + F A+E
Sbjct: 481 NAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFD 540
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ + +AY G+A S G K+A EA AI +D
Sbjct: 541 QAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAID 580
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +G+Y A++ FD L+ YPEA +G A + A++ + +A+ +NP
Sbjct: 3718 KGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQALSANP 3777
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA ++G+ L AI+ +ALE P+ + + + ++AA+ +
Sbjct: 3778 GYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYDEGSYDAAITEY 3837
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + Y GLA ++I +Y++A +++ KA++LD + +A+ H +L
Sbjct: 3838 DRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGADAFSHKGSSLAELGM 3897
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
ALE ++ + D + ++ +G +L+ LG+ +A G R
Sbjct: 3898 YRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLR 3944
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ +GI+ N G+YA AI FD+ + E+P A +G A AI + A++
Sbjct: 1335 RMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALE 1394
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
S EA +G A LG EA+ +ALE P+ L RG K + + AV
Sbjct: 1395 VESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAV 1454
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ A + L + A+ G++L++ G Y+ + A+ +A++ D E+ + +
Sbjct: 1455 QAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHN 1514
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L E AL + + I F++A+ RGL+L LG+++++++ L
Sbjct: 1515 LGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEAL 1559
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA--WKRRGQ 457
A++ +DQ L +P Y EA+ +G + + AI F A++ NPS +A WK R
Sbjct: 3765 ALAAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTL 3824
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
G AI + +A+ +P+ ++ +RG+ + A++ ++LD
Sbjct: 3825 YDE--GSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGA 3882
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A+++ G +L+ +G Y+ A EA KAI+ D +W DL +A +
Sbjct: 3883 DAFSHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEG 3942
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L D + + RG+ L GL HK AI+
Sbjct: 3943 LRRDPENAVGWTRRGMSLAGLNDHKAAIE 3971
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-- 429
K+ I DF + RG+ N G+Y ++ D L DP A + RAF
Sbjct: 1527 KAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPK--NARVNYQKGRAFDGLG 1584
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E AIS + A+Q+ P A +G+A + +A ++ K L P++A+ +
Sbjct: 1585 QYENAISAYDAALQAQPDCIPARMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKM 1644
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
F D+ +E ++ + ++ A Y GLA +G Y++A E+ +A Q+D +
Sbjct: 1645 ARARFSLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSH 1704
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A HL L A+ +VL + + A+HLRG+ L G + +AI
Sbjct: 1705 LEQAVYHLGAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFE 1764
Query: 610 SGSR 613
+ R
Sbjct: 1765 NALR 1768
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + AI+ FD+ L E YPEA + RG A A E E A+ + A+ N
Sbjct: 3581 AKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQN 3640
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A +G+A L + EA+ + K L +P SAD + +G + + + A++
Sbjct: 3641 ESYATALLNKGRALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDA 3700
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++++ A+ Y G AL+ G+Y++A A A+++ ++ EA+ + L
Sbjct: 3701 FNRALAINRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLE 3760
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
S++AL Q L + +++A +G
Sbjct: 3761 RSKEALAAYDQALSANPGYAEAIFQKG 3787
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 13/253 (5%)
Query: 366 KKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKEDP 412
K + R+SK+K F ++G+A N K+A AI++FD L+ D
Sbjct: 2698 KGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDA 2757
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ EA +G A++ R + A+ F A+ +P W +G A A G++ EA+
Sbjct: 2758 KHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVAAF 2817
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S+A+ + + +E+G + + AV + + LD A YLGLAL +G+
Sbjct: 2818 SEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLALERVGK 2877
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A A+ + + + +AW H + L A++ ++ I+ G
Sbjct: 2878 FTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLPLLFADG 2937
Query: 593 LLLHGLGQHKKAI 605
LGQ + AI
Sbjct: 2938 RAWARLGQFEDAI 2950
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G ++ GKY A++ FDQ L+ +P Y E RG A + AI F ++ +
Sbjct: 1201 NKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNLEKD 1260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S + +G A + LG EA+ +AL ++P +A + ++G F AV
Sbjct: 1261 TSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAA 1320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L A G++L ++G Y A + I + + AW + D
Sbjct: 1321 FEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSG 1380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+ +A++ + L ++ + +A++ +GL L+ LG++++A+ + PHL + L
Sbjct: 1381 SYTEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALES-NPHLDYAL 1437
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 369 CVTRISKSKSISVD----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
+T ++ +I D +R RG+A +Y AI +D+ L+ D +A +G++
Sbjct: 3833 AITEYDRAIAIKPDRPELYR-DRGLAYAAIDQYREAIKSYDKALELDTHGADAFSHKGSS 3891
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A A+ F +AI+ +P +W +G LG+ EA + L +P +A
Sbjct: 3892 LAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAV 3951
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG+ D AA+E + +D AY G A ++G++++AE + I
Sbjct: 3952 GWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMI 4011
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L +F++AW H + Q+ ++AL ++ L ID + ++ G L LG+H++A
Sbjct: 4012 SLQPDFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEA 4071
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G+ A+ FD L+ DP++ +AL +G A A+ F + +
Sbjct: 3242 RGVSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEK 3301
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + +G A A LG EAI K ++ + + D + +G+ A+E
Sbjct: 3302 NYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAF 3361
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D + + + G+AL +G + A ++ KA+++ +AW + + Y L
Sbjct: 3362 DHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNT 3421
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ + L + F++A++ +G L +G++ +A+
Sbjct: 3422 YDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAV 3460
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA A+ FD+IL +P A + +G A + + A++ +T ++ NP +AW R+
Sbjct: 973 RYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARK 1032
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG + EA+ SKAL+ I +G + A E + +KLD +
Sbjct: 1033 GVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPD 1092
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G AL +G Y+ A +A AI L++ A+ + + + + +AL+ +
Sbjct: 1093 QEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKGFSLEKINRAGEALQVFE 1152
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+L ID S+A++ GL L G G+ K A+ S
Sbjct: 1153 VLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFES 1187
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGR----------------- 421
G+A +Y+ A+S FD++L+ P EAL +GR
Sbjct: 2461 GLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENN 2520
Query: 422 --------GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
G+ Q LE A+ F A+ P AW R+G+A + L EAIQ
Sbjct: 2521 IADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFD 2580
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ + + A +G D AA+E L+ ++L +N + + +AL+ +G Y
Sbjct: 2581 RVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRY 2640
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+++ ++ +A+ L+ + A+ L +A+E + ID F+ AY +GL
Sbjct: 2641 EESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGL 2700
Query: 594 LLHGLGQHKKAI 605
L L ++K+A+
Sbjct: 2701 ALARLSKNKEAV 2712
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A GK AI F L+ DP +AL G A A A+S F + ++S P
Sbjct: 2426 KGLALFALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGP 2485
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA ++G+ A LG EA+ L +L E N AD+ +G V + + A+E
Sbjct: 2486 QNAEALFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQERLEDALEVF 2545
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L EN +A+ G A S + Y +A + + + D +AW +
Sbjct: 2546 DRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDRVVTSDTGCAQAWFRKGSALLSNGD 2605
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+E L + L + + ++ R + L GLG+++++I
Sbjct: 2606 LRAAIEALTKALELKPDNANGWYDRAVALAGLGRYEESI 2644
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 124/587 (21%), Positives = 229/587 (39%), Gaps = 59/587 (10%)
Query: 46 LCSLRNWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L ++ AIR D +A++ + + + I D+AL+++ + +
Sbjct: 1342 LYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVESSYPE 1401
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE------HAL-HQSADLKQFLELEELLTAAKQDR 157
A+ KG A LGR EEAL +++ E +AL H+ A L + E + A
Sbjct: 1402 AHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAVQAFDAAL 1461
Query: 158 SVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHD 217
+ +Y ++ + ++++ GL ++ ++++ CD S +++ S
Sbjct: 1462 LLLPKYAPAHHLKGVSLAAQGL-----YQDSIYAYDRALECDPGSGESALNKAMS----- 1511
Query: 218 PDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQS 277
L N DE ++ + + I E G ++ R ++S
Sbjct: 1512 --LHNLGQDE----DALAAAVKAIEIQPDFAEAWRYR-----GLILSNLGR-----YQES 1555
Query: 278 SDDFD-ICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLN---DSNTNSESYSKSSI 333
+ D G A VN + GR +G + +S+ A+L D ++ +
Sbjct: 1556 VEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDAALQAQPDCIPARMHKGEALL 1615
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS---------------KSKS 378
++ D+T+ K+ L E + A+ K R S + +
Sbjct: 1616 FISRFRDATKEFGKI------LTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNA 1669
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
S + L RG+AQ G+Y A+ + + D +A+ G A AI F
Sbjct: 1670 DSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERYGDAIPAF 1729
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ P A RG A AA G EAI AL ++P SA+ + I
Sbjct: 1730 DRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPRSAESALNKAIALHSLGR 1789
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ + + + A+ Y G+AL ++ Y A A ++++LD AW +
Sbjct: 1790 DEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMG 1849
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A VL + + AY +G L LG++++A+
Sbjct: 1850 LCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKYEEAV 1896
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A + A++ FDQ+L +P P A RG A + + E A+ + S
Sbjct: 3070 LERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDTTLSS 3129
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-------------- 490
+P A R + AAL EA + + L + P +AD +E+G
Sbjct: 3130 DPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRHYDEAIA 3189
Query: 491 ----IVNFKFKDFNA----------------AVEDLSACVKLDKENKSAYTYLGLALSSI 530
++N + F+A AV SA + L + + Y G++L+
Sbjct: 3190 AFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRGVSLAEN 3249
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ ++A +A A+++D F +A + L +A++ + L I+K ++ Y
Sbjct: 3250 GQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFH 3309
Query: 591 RGLLLHGLGQHKKAIK------DLSSGSRTMMPH 618
+GL L LG+H +AI DL +G+ H
Sbjct: 3310 KGLALAELGRHDEAITAFDKDIDLDAGNNDAFYH 3343
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY+ A++ + L P + RG + A + E A+ F A++ +P +A
Sbjct: 3216 GKYSEAVTSYSAALALKPSDAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALFA 3275
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+A LG EA++ K L E N A + +G+ + + A+ + LD
Sbjct: 3276 KGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDA 3335
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N A+ + G++L++ G+ A EA IQ D ++ W H DL A+
Sbjct: 3336 GNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSY 3395
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ L I + A++L G + L + +AI
Sbjct: 3396 KKALEIGPTNADAWYLVGRSYYALNTYDEAI 3426
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G+Y A+ FD+ L DP +G A + A++ F + + P
Sbjct: 1270 KGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAAFEKTLALKP 1329
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA R+G + LG +AI+D + + P++ +++G F + A++
Sbjct: 1330 RYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAY 1389
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ A+ + GLAL +G Y++A ++ +A++ + + A H L
Sbjct: 1390 DRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLER 1449
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A++ L + +++ A+HL+G+ L G ++ +I
Sbjct: 1450 YREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSI 1488
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+A K A++ FD L DP AL +G A A ++ AI+ F A++
Sbjct: 2696 LEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRI 2755
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EAW +G A++ L +A+ AL +P + +E+G+ + + AV
Sbjct: 2756 DAKHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVA 2815
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + D + A G AL +GE ++A + +A+ LD +F +A +L + +
Sbjct: 2816 AFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLALERV 2875
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
A+ +++ S A++ RG+ LG+ A++ +R + PH
Sbjct: 2876 GKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAYEK-ARQIEPH 2928
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 34/263 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + +GI+ + A FD+ +++DP+ P+A + +G + E A +
Sbjct: 244 ADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDK 303
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A + +P + + RG+A LG+ EA+ D +AL EP +AD L+ RG+ ++
Sbjct: 304 AAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIHLSRYD 363
Query: 501 AAV-------------------------------EDLSA---CVKLDKENKSAYTYLGLA 526
++ E +SA + +D SA +GLA
Sbjct: 364 ESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLA 423
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+S+G Y A A+ +A+++ ++ +A H L NSE AL + L + +
Sbjct: 424 SASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPGNAP 483
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
AYH +G LL G+ ++A++ L+
Sbjct: 484 AYHQKGQLLVRTGRLEEALEALN 506
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ FD +L P + +AL + A + A++ ++ A+ PS + RG
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRG 3243
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A G+ EA++ ALE +P +D L +G F AV+ + ++K
Sbjct: 3244 VSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNY 3303
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y + GLAL+ +G + +A A K I LD +A+ H A+E
Sbjct: 3304 AGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDH 3363
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
V+ D + + RG+ L LG+ AI
Sbjct: 3364 VIQADPGSVQGWLHRGMALFDLGRFNDAI 3392
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI+ G++ AIS +D L DP Y + +G A A + AI+ + +A+ P
Sbjct: 114 KGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVP 173
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ G + +G EA+ KA + +P+ + + R + K + + A E
Sbjct: 174 EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQERYAQAAEAA 233
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + E+ + G++L + +A +A +AI+ D +AW + D+
Sbjct: 234 GVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMER 293
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A L + + + +K Y+ RG LG++++A+ D
Sbjct: 294 YEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADF 335
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY+ AI+ FD+ L D + AL+ +G +RA + E A++ F I +P
Sbjct: 2018 RGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDP 2077
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A G A A L +A+ L +ALE++ N+A I +G ++ F + E
Sbjct: 2078 ENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRFKESAESF 2137
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ K + ++ + + G +L G++++ K + ++ +AW + Y L+
Sbjct: 2138 AKAQKREPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSL 2197
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
++A E +Q L ID + A++ +GL+L
Sbjct: 2198 HDEAQESFEQALTIDGECATAWYQKGLVL 2226
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+ + R +A++ + Y A+ ++ + DP + +G+ Q++ AA++ F +
Sbjct: 2286 IQYYRGRALAEMRD--YGVALDALNRAIGLDPENSFTWLAKGSVLLAQKDGAAAVAAFDQ 2343
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P A +A +G+A + LG EAI AL E + ++G+ + K++N
Sbjct: 2344 ALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRLKNYN 2403
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E A ++ + A+ + GLAL ++G+ +KA + A++ D + +A H
Sbjct: 2404 GAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEHDPSLSDALFHTGLA 2463
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
Y L+ AL ++L + ++A +G +L LG+ +A+ L +
Sbjct: 2464 YAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLET 2513
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 34/257 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA +Y AI F+++L +P +AL G A A ++ + AI F +++ +P
Sbjct: 794 KGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDP 853
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A G + +A++ S+AL + ++A + +GI + + A+ L
Sbjct: 854 KNPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAAL 913
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE---------------------------------- 532
+ +++D A+TYLG++L+ +G
Sbjct: 914 NTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQR 973
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A E + + L+ N + AW + L + AL +VL I+ + A+ +G
Sbjct: 974 YADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARKG 1033
Query: 593 LLLHGLGQHKKAIKDLS 609
+LL LG+ +A+ S
Sbjct: 1034 VLLQDLGRTAEAVTAFS 1050
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV L RG+A + G++ AIS + + L+ P +A G + + AI+ F
Sbjct: 3371 SVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFD 3430
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ EAW +G+ A+G+ EA+ L P + + +G+ K +
Sbjct: 3431 RALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRA 3490
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AV ++L +T G+AL+++ +K A + KAI LDR A+
Sbjct: 3491 GDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGL 3550
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Y L + A+ + L ++A++ +G L G+ +AI
Sbjct: 3551 SYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAI 3596
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 34/241 (14%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++++ ++L+ +P +A +G A++ F++A+ N G W +G A
Sbjct: 1011 ALAVYTRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDAL 1070
Query: 460 AALGESVEAIQDLSKALEFEPN--------------------------SADILHERGIVN 493
+ LG++ EA + ++AL+ +P+ +A L++R V
Sbjct: 1071 STLGKTSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVA 1130
Query: 494 FKFKDF--------NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
F +K F A++ +++D N A+ ++GLAL+ G K A A A++
Sbjct: 1131 FLYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALK 1190
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ F AW + + DL ++AL Q L + +++ ++ RG+ L LG+ +AI
Sbjct: 1191 IRDTFAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAI 1250
Query: 606 K 606
+
Sbjct: 1251 E 1251
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A G++ AI F++ L++D +G A + + A+ F A+ +
Sbjct: 1235 SRGVALSKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYD 1294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + ++G+A L EA+ K L +P ++ +GI + + A+ D
Sbjct: 1295 PENALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRD 1354
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + N A+ G AL G Y +A +A+ +A++++ ++ EA H +L
Sbjct: 1355 FDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVESSYPEAHYHKGLALYELG 1414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+AL Q L + A RG L L ++++A++
Sbjct: 1415 RYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAVQ 1455
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D L +G + + + A+ +FD+ L P A +G A + AI F
Sbjct: 2522 ADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDR 2581
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ S+ +AW R+G A + G+ AI+ L+KALE +P++A+ ++R + +
Sbjct: 2582 VVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRYE 2641
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
++ + L+ + SAY G ALS +G ++A EA A +D F A+
Sbjct: 2642 ESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGLA 2701
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
L+ +++A+ L +D A +GL L L + AI + R H
Sbjct: 2702 LARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDAKH 2759
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 34/255 (13%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKE----------------------------- 410
+ D SRG++ ++ +Y ++S+FD+IL
Sbjct: 345 NADALYSRGVSCIHLSRYDESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFE 404
Query: 411 -----DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
DP A G A A A++ + A++ P +A +G A A LG S
Sbjct: 405 HTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNS 464
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+A+ + +AL P +A H++G + + A+E L+ + L +N Y G
Sbjct: 465 EDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGS 524
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
AL + A EA +AI + N++ A+ + + ++ALE + ID +
Sbjct: 525 ALLKAERFGPALEAFDQAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHT 584
Query: 586 KAYHLRGLLLHGLGQ 600
A + RG +L GLG+
Sbjct: 585 LALYHRGTMLSGLGR 599
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + GK AI +DQ L+ DP P L +G A A + + AI F +
Sbjct: 758 FQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAIKTFERLLTL 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A G A A EAI ++LE +P + H G+ + ++ A+
Sbjct: 818 EPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVECDRYDDALR 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + LD N S Y Y G+A +Y++A A AI++D + +A+ +L L
Sbjct: 878 SFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARL 937
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+ L + L + +A RG L L ++ A++
Sbjct: 938 GRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYADAVE 979
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ +G Y +I +D+ L+ DP E+ + + + + E A++ +AI+ P
Sbjct: 1474 KGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHNLGQDEDALAAAVKAIEIQP 1533
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW+ RG + LG E+++ L AL +P +A + +++G + A+
Sbjct: 1534 DFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAY 1593
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++ + A + G AL I ++ A + K + + EAW + + L +
Sbjct: 1594 DAALQAQPDCIPARMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGD 1653
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +E L + ++A RGL + LG++++A++ L+
Sbjct: 1654 YTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLA 1696
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +D L + YPE +G A + AI F AIQ P +A +G A
Sbjct: 2371 AIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLAL 2430
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
ALG++ +AI+ + ALE +P+ +D L G+ ++ A+ ++ +N A
Sbjct: 2431 FALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEA 2490
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
G L+ +G +A ++ L+ N + W + E ALE + L
Sbjct: 2491 LFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQERLEDALEVFDRALA 2550
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + A++ +G GL ++ +AI+
Sbjct: 2551 LTPENNAAWYRKGKAFSGLHRYPEAIQ 2577
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++G A + G + A+ FD+ L + Y +G A A + AI+ F +
Sbjct: 3271 DALFAKGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKD 3330
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + +A+ +G + AA G+ A++ ++ +P S RG+ F FN
Sbjct: 3331 IDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFND 3390
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ N A+ +G + ++ Y +A A +A+ L F EAW + +
Sbjct: 3391 AISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTL 3450
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL-- 619
+ +A+ L + + +A++ +G+ L L + A+ R + P+
Sbjct: 3451 FAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALR-LRPNFSY 3509
Query: 620 IWN 622
IW
Sbjct: 3510 IWT 3512
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A+ F++ +++DP + G+G + A + + E ++ +P W R
Sbjct: 3896 GMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTR 3955
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + A L + AI+ +AL +P+ + RG F A A + L
Sbjct: 3956 RGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQP 4015
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ + G AL +Y++A + +A+++D + E W + L E+A C
Sbjct: 4016 DFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICY 4075
Query: 575 QQVL 578
++ L
Sbjct: 4076 EKAL 4079
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + +Y AI FD++L P A RG A A Q AIS F A++ +P
Sbjct: 1713 GAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPR 1772
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E+ + A +LG E+I AL +P+ A+ + +G+ K + AV S
Sbjct: 1773 SAESALNKAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFS 1832
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD A+ +GL L + Y++A A + L ++ A+ H + L
Sbjct: 1833 RSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKY 1892
Query: 568 EKALECLQQVLYI 580
E+A+ L I
Sbjct: 1893 EEAVVAFDSALAI 1905
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ ++GIA G A+ FD + DP + AL RGT + A + +
Sbjct: 550 VNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADAAAAYDA 609
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ +P A +G A L +A + +A+E +P D G N F
Sbjct: 610 VLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFP 669
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + L +N A+ + G+AL + G++++A A +A++ AW +
Sbjct: 670 DAIAAFDRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMS 729
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L E+A+ ++VL I++R S A+ +G L LG+ +AI
Sbjct: 730 LAALQRFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGKQLEAI 774
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ + +Y A FD L P PE +G A E A++ F AI P
Sbjct: 3004 RGLSLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLP 3063
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG+A AAL + EA+ + L EP ERG + + AVE L
Sbjct: 3064 DDPGAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEAL 3123
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ D + A + +L+++ Y +A E+ + + +AW L +
Sbjct: 3124 DTTLSSDPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRH 3183
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++A+ VL + A + L LG++ +A+ S+
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSA 3227
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAI-SDFTEAIQS 444
RG+A +G Y AIS F+ L+ DP E+ + + A + R+ E+ + SD IQ
Sbjct: 1746 RGVALAAQGMYPEAISSFENALRYDPRSAESALNKAIALHSLGRDEESILASDIALGIQ- 1804
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G A L +A+ S++LE + + E G+ + + + A
Sbjct: 1805 -PDFAEAWYYKGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAG 1863
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGH 556
+ L + AY + G AL+ +G+Y++A A A+ + D L A GH
Sbjct: 1864 AFDHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDAIVLSAKGH 1918
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ S + +G A ++ G +AI + L+ P R A A
Sbjct: 2578 CFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGL 2637
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E +I + A+ NP A+ +G A + LG +AI+ A +P A E
Sbjct: 2638 GRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLE 2697
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + AV A + LD N A GLAL+++ ++ A A+++D
Sbjct: 2698 KGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDA 2757
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW L + + A+ L ID ++ +G+ L G++ +A+
Sbjct: 2758 KHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVAAF 2817
Query: 609 S 609
S
Sbjct: 2818 S 2818
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+S +D L P + EA +G A + A+S F +A++ P+ W
Sbjct: 3454 GKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTG 3513
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A AAL +AI +KA+ + + ++ G+ + A+ + A +
Sbjct: 3514 KGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHP 3573
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G AL + + +A + KA+ ++ EAW + +L E+AL+C
Sbjct: 3574 SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCY 3633
Query: 575 QQVLYIDKRFSKA 587
L ++ ++ A
Sbjct: 3634 NHALAQNESYATA 3646
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 14/233 (6%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ +G A + ++ A F +IL E P EA I AR ++ D+TE I+
Sbjct: 1607 RMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARF-------SLGDYTEVIE 1659
Query: 444 S-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ N + EA RG A+ LG EA++ L++A + + + ++ G K
Sbjct: 1660 ACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKL 1719
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + A+ + L + +A+ G+AL++ G Y +A + A++ D E+ +
Sbjct: 1720 ERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPRSAESALN 1779
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L E+++ L I F++A++ +G+ L L ++ A+ S
Sbjct: 1780 KAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFS 1832
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 2/226 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F R +A + GKY A+ FD L P L +G A ++ A + F EA
Sbjct: 1880 FHKGRALALL--GKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAAFEEAT 1937
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NP+A + + G A +AI +K L +P + D L + GIV + + ++ A
Sbjct: 1938 SVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEA 1997
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++L KEN G A ++ +Y +A + +A+ LD N + A Q
Sbjct: 1998 IGLFDRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRA 2057
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+L E+A+ +V+ +D A+ + G L L +++ A+ L
Sbjct: 2058 NLGQYEEAVTLFDRVITLDPENVIAHFVMGTALARLARYEDAVVAL 2103
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A + + + AI+ F + L+ DP P+AL G A + + AI F ++
Sbjct: 1951 GLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGKE 2010
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
RG A AL + EAI +AL + N L ++G + AV
Sbjct: 2011 NAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFD 2070
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ LD EN A+ +G AL+ + Y+ A A +A++ D N
Sbjct: 2071 RVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGN 2112
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q E AI+ F + ++ +P +A + G A L + EAI + LE
Sbjct: 1951 GLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGKE 2010
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A IL+ERG F + ++ A+ + LD + A G + +++G+Y++A
Sbjct: 2011 NAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFD 2070
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ I LD + A + LA E A+ L + L D ++ Y +G L+ LG+
Sbjct: 2071 RVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRF 2130
Query: 602 KKAIKDLSSGSR 613
K++ + + +
Sbjct: 2131 KESAESFAKAQK 2142
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+A + Y AI FD ++ P + +A +G A + E AI FT A++
Sbjct: 2390 FKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEH 2449
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS +A G A AAL A+ K LE P +A+ L ++G + K + A+
Sbjct: 2450 DPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALA 2509
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + L+ + G L + A E +A+ L AW + + L
Sbjct: 2510 VLETSLGLENNIADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGL 2569
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A++C +V+ D ++A+ +G L G + AI+ L+
Sbjct: 2570 HRYPEAIQCFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALT 2614
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G + G++ A+ +FD+ L P P+A +G A E A+ + A+
Sbjct: 10 MRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSYDHALAL 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQ--DLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+PS +W + A +G + EA+ D AL F+ A IL +GI ++ F A
Sbjct: 70 DPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWIL--KGISLYELGRFRDA 127
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + +D Y G+AL+ +G + +A A+ KA+ + + +A+ ++
Sbjct: 128 ISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMGISLY 187
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
++ ++AL ++ +D ++ R +L
Sbjct: 188 EIGRYDEALGAFEKAHDLDPSDPWVWYYRAFIL 220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + + A+S FDQ L+ P + G+G A A + AIS +T+AI +
Sbjct: 3480 KGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDR 3539
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ + G + +LG +AI++ L P+ A + +G F+ A+
Sbjct: 3540 KDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAITSF 3599
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + A+ Y G+A +++ E+++A + + A+ + ++ A + + L
Sbjct: 3600 DKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLER 3659
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRG 592
+ +AL +++VL I + A++ +G
Sbjct: 3660 TGEALAAIEKVLTIQPESADAFYYKG 3685
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 34/266 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + ++ GK+ I+IFD++L +P +A +G A + + A F +A+ +
Sbjct: 2154 RGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESFEQALTIDG 2213
Query: 447 SAGEAWKRRG----------------QARAALGESV------------------EAIQDL 472
AW ++G + A L SV EAI
Sbjct: 2214 ECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRNALCLFMLERYPEAISAF 2273
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL P +A I + RG + +D+ A++ L+ + LD EN + G L + +
Sbjct: 2274 DRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPENSFTWLAKGSVLLAQKD 2333
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A A +A+ LD +A + + L N E+A+ L ++ + + +G
Sbjct: 2334 GAAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKG 2393
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMMPH 618
L L L + AI+ + + + H
Sbjct: 2394 LALLRLKNYNGAIEAFDAAIQFVPGH 2419
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EA R+G LG EA+ +AL P + +GI + + A++
Sbjct: 4 SDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSY 63
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ LD + +++ L+ IG K+A +A + I L + EAW +L
Sbjct: 64 DHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGR 123
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ L ID ++K Y+ +G+ L LG+H +AI
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAI 162
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G++ V +Y A+ F + L D +G A + E AI+ AI+ + S
Sbjct: 863 GVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTS 922
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G + A LG EA+ L+++L P+ + L RG + + AVE
Sbjct: 923 LSDAFTYLGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYADAVETFD 982
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ SA+ G AL + + + A + + ++++ +AW QDL +
Sbjct: 983 RILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARKGVLLQDLGRT 1042
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+ + L I+ + +G L LG+
Sbjct: 1043 AEAVTAFSKALDINAGIGGIWMHKGDALSTLGK 1075
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P AL +G A + A F +A++ +P +AW G A LG+ +AI
Sbjct: 615 PQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAA 674
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + P + +GI F A+ L+ ++ ++ A+ Y G++L+++
Sbjct: 675 FDRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQ 734
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+++A + + ++++R A+ L +A+ Q L ID + +
Sbjct: 735 RFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQK 794
Query: 592 GLLLHGLGQHKKAIK 606
G+ L ++ AIK
Sbjct: 795 GIALAQRERYDDAIK 809
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 77/203 (37%), Gaps = 35/203 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA----- 441
+G+A GK A++ F + + D PEA +G A E E A++ FT A
Sbjct: 2800 KGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDT 2859
Query: 442 -----------------------------IQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ + P +AW RG A LG +A+Q
Sbjct: 2860 SFGDAAYYLGLALERVGKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAY 2919
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA + EP++ +L G + F A+ + + N AL+++G
Sbjct: 2920 EKARQIEPHNLPLLFADGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGR 2979
Query: 533 YKKAEEA-HLKAIQLDRNFLEAW 554
+ +A+E L QL N+ A+
Sbjct: 2980 HDEAQEIFRLAFTQLTDNYEPAY 3002
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 93/219 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA + +Y AI+ + ++ D +A G + A + A++ ++ +NP
Sbjct: 896 QGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANP 955
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EA RG++ L +A++ + L PN ++G + A+
Sbjct: 956 SQMEALVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVY 1015
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ N A+ G+ L +G +A A KA+ ++ W H L
Sbjct: 1016 TRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGK 1075
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +A E + L +D + + G L LG+++ AI
Sbjct: 1076 TSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAI 1114
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA-------LSVWE 127
R + L HK I D+AL +DP+ AY +G AF ALG+ EEA +S+
Sbjct: 3956 RGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQP 4015
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQ 155
+ +HQ L++ + +E LT+ K+
Sbjct: 4016 DFVDAWIHQGRALQEQEKYQEALTSFKR 4043
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ ++ D RGIA G+ A+ +++ + +P L G A A +
Sbjct: 2887 RMVAARPDHSDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLPLLFADGRAWARLGQF 2946
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI F A+ P GE + +A AALG EA + A ++ + + RG+
Sbjct: 2947 EDAIHLFDIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLTDNYEPAYLRGL 3006
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A A + L + + G AL G Y+ A A AI L +
Sbjct: 3007 SLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLPDDP 3066
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + L +++A+ QVL ++ A RG L+ +++ A++ L +
Sbjct: 3067 GAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDT 3125
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 14 NKTHKTICEIDELVRVDSVMASAITA-RIELAKLCSLRNWSKAIRILD-SLLAQSYEIQD 71
++ + I ++ +R+D+ ++ A T I LA+L +A+ L+ SL A +++
Sbjct: 904 HQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLG---RHDEAVAALNRSLAANPSQMEA 960
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ R L+ + + D+ L L+P ++ A++ KG A L +K++AL+V+ +
Sbjct: 961 LVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTR 1017
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 14 NKTHKTICEIDELVRVDSVMASAI-TARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
++ K I + +R+D A+ A I LA+L + +AI + D L E I
Sbjct: 1958 HRDEKAIAAFAKTLRIDPENPDALFQAGIVLARL---EKYDEAIGLFDRYLELGKENAGI 2014
Query: 73 C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
R Y L+ + I D+AL LD + A + KG + + LG+ EEA++++++
Sbjct: 2015 LYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDR 2071
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G A ++ + A++ +++L P +A +G A +R+ + AI F A+
Sbjct: 3648 LNKGRALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAI 3707
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA +G A A G+ EA+ AL + + + +E+G F + A+
Sbjct: 3708 NRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALA 3767
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA--WGHLTQFYQ 562
+ + A G ++ A + +A++++ + +A W T +
Sbjct: 3768 AYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLY-- 3825
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D + + A+ + + I + Y RGL + Q+++AIK
Sbjct: 3826 DEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIK 3869
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 34/196 (17%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP--MYPEALIGRGTAR---------AFQRELE- 432
+ +G ++ N G+Y A+++FD+++ DP + ++G AR A R LE
Sbjct: 2050 VKKGQSRANLGQYEEAVTLFDRVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEY 2109
Query: 433 ----------------------AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+ F +A + P + + RG++ G+ E I
Sbjct: 2110 DGNNARIYACKGYSLYRLGRFKESAESFAKAQKREPKDPFSLRFRGKSLLHNGKWEEGIA 2169
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
K L EP SAD + +GI + A E + +D E +A+ GL L
Sbjct: 2170 IFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESFEQALTIDGECATAWYQKGLVLFER 2229
Query: 531 GEYKKAEEAHLKAIQL 546
++++ A +A +L
Sbjct: 2230 ERFEESLPAFERAAEL 2245
>gi|408674917|ref|YP_006874665.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387856541|gb|AFK04638.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 448
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 17/236 (7%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP----MYPEALIGRGTARAFQRELEAAISDFTE 440
L RG+ + Y AI F ++++ +P MY +A RG ++ + + +I+DFT+
Sbjct: 132 LYRGMTRAKLLDYRRAIQDFTKVVELNPEDDKMY-QAFFSRGACKSRLEDYQGSITDFTK 190
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP +++ RG +R + + +I+D +A++ P ++ RG K +DF
Sbjct: 191 AIDMNPKRSQSFASRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFR 250
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D ++LD +N A+ G S +G K A KAI++D ++ ++
Sbjct: 251 GAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSID-----SKV 305
Query: 561 YQDLANSEKALECLQQVLYIDKRF-------SKAYHLRGLLLHGLGQHKKAIKDLS 609
Y ++K L+ L+ V+ R S+AY+ RG+ G K AI DL+
Sbjct: 306 YYTGRITKKTLDELRSVVQEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLN 361
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG +++ +A +I FD+ +K +P E+ RG A+ + A++D+ +AIQ +
Sbjct: 204 SRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFRGAMNDYDKAIQLD 263
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDFNAAV 503
P A+ RG + LG +A DL+KA+E + S D + + I + + V
Sbjct: 264 PKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSIDSKVYYTGRITKKTLDELRSVV 323
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ S + ++ AY G++ G+ K A K+I+L+ + EA+
Sbjct: 324 QEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSS 383
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++AL+ + ++ ++++AY++RG++ H LG DLS
Sbjct: 384 MGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKHALGDENAGCYDLS 429
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+T+++ ++ S F + G+ + G Y A + + +P + RG A+
Sbjct: 16 CITKVNAQQTASEYFEI--GVNKSKAGDYIGASQAYSTAIAMNPENAASYYNRGLAKQQL 73
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ AI DF I +P A+ RG++++ + A+QD ++ +E P A
Sbjct: 74 KDHRGAILDFDRTIDLDPKNALAYLYRGKSKSEQDDHRSALQDYNRTIELNPEDAMAYLY 133
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQ 545
RG+ K D+ A++D + V+L+ E+ Y G S + +Y+ + KAI
Sbjct: 134 RGMTRAKLLDYRRAIQDFTKVVELNPEDDKMYQAFFSRGACKSRLEDYQGSITDFTKAID 193
Query: 546 LD 547
++
Sbjct: 194 MN 195
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG ++ + + AI D ++I+ NP+ EA+ RG R+++G EA+QD S A
Sbjct: 338 EAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNA 397
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++ P A+ + RGI+ D NA DLS +L
Sbjct: 398 IKLNPKYAEAYYVRGIIKHALGDENAGCYDLSRAGEL 434
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGI++ G AI ++ ++ +P Y EA RG R+ + A+ D + AI+ N
Sbjct: 342 SRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNAIKLN 401
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P EA+ RG + ALG+ DLS+A E ++A
Sbjct: 402 PKYAEAYYVRGIIKHALGDENAGCYDLSRAGELGYSAA 439
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A+ + A++ +D+ ++ DP A GRG + + A SD T+AI+
Sbjct: 237 FNRGFAKTKIEDFRGAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEV 296
Query: 445 NPSA------------------------------------GEAWKRRGQARAALGESVEA 468
+ + EA+ RG ++ G+ A
Sbjct: 297 DNMSIDSKVYYTGRITKKTLDELRSVVQEKSRINEFSEDRSEAYYSRGISKFKSGDGKGA 356
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I DL+K++E P A+ RG+V A++D S +KL+ + AY G+
Sbjct: 357 ILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKH 416
Query: 529 SIGE 532
++G+
Sbjct: 417 ALGD 420
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ +A++ L+ ++SY NR F +++E + + D DKA+QLDP ++A+
Sbjct: 218 SIKDFDEAVK-LNPEDSESY-----FNRGFAKTKIEDFRGAMNDYDKAIQLDPKNVRAFY 271
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G S LG +++A S K E
Sbjct: 272 GRGFCNSKLGNQKDATSDLTKAIE 295
>gi|425460012|ref|ZP_18839498.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
[Microcystis aeruginosa PCC 9808]
gi|389827371|emb|CCI21411.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
[Microcystis aeruginosa PCC 9808]
Length = 944
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P Y EA RG+A E AI+ + A++
Sbjct: 189 NRGVALGNLGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ D + RGI F A+
Sbjct: 249 PDKHEAWHNRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIAS 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL +G +++A ++ +A+++ + EAW + + L+
Sbjct: 309 YDRALEIKPDKHEAWNNRGVALDDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAVCSLS 368
Query: 566 NSEKALECLQQVLY------IDKRFSKAYHLRGLLLH 596
+ + L+ ++Y ++ R + LR L H
Sbjct: 369 KNRVSTPSLEALIYRKPIVALNDREPHIFALREALPH 405
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F +G + G + AI+ +D+ L+ P EA RG A E AI+ + A
Sbjct: 151 EFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRA 210
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P EAW RG A LG EAI +ALE +P+ + H RG F
Sbjct: 211 LEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEE 270
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ + A+ G+AL +G +++A ++ +A+++ + EAW +
Sbjct: 271 AIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVAL 330
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS----------- 610
DL E+A+ + L I +A++ RG + L +++ + L +
Sbjct: 331 DDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAVCSLSKNRVSTPSLEALIYRKPIVALN 390
Query: 611 -------GSRTMMPHLIWNLTRW 626
R +PHLI W
Sbjct: 391 DREPHIFALREALPHLIQGSPPW 413
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 63/123 (51%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ +G + DF A+ +++ + A+ G+AL ++G +++A ++ +
Sbjct: 150 AEFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDR 209
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+++ ++ EAW + +L E+A+ + L I +A+H RG LH LG+ +
Sbjct: 210 ALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFE 269
Query: 603 KAI 605
+AI
Sbjct: 270 EAI 272
>gi|296125217|ref|YP_003632469.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 356
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y ++I FD+++ E RG +++ R E AI DF + I +P+ A+
Sbjct: 18 GDYKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNN 77
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LG EAI+ SKALE + N + + G+ N ++ A+++ +++
Sbjct: 78 IGLVNHNLGNYKEAIKYYSKALELDNNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEI-S 136
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y +GL + +G Y+ A + K ++LD+N+ +A+ ++ +L ++++E
Sbjct: 137 PNVHTYNNIGLVKNDLGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYF 196
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L +D + Y+ G++ H LG++K+A++
Sbjct: 197 NKALELDNNSAYTYNNIGIVKHDLGKYKEALE 228
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ Y AI F++++ DP Y A G + AI +++A++ +
Sbjct: 43 NRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIGLVNHNLGNYKEAIKYYSKALELD 102
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + G A LG EAI++ KA+E PN + G+V + A++D
Sbjct: 103 NNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEISPN-VHTYNNIGLVKNDLGLYEDAIKD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LDK AY +GL+ ++ Y ++ E KA++LD N + ++ DL
Sbjct: 162 FNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLG 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ALE + L +D +SK+Y+ RG+ L + +A+ D
Sbjct: 222 KYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDF 264
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y AI F+++L+ D Y +A G ++ + + +I F +A++ + +
Sbjct: 146 GLVKNDLGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNN 205
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G + LG+ EA++ KALE + N + + RG+ K ++ AV D
Sbjct: 206 SAYTYNNIGIVKHDLGKYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFY 265
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++L+ +N +AY L + Y++A E + K I
Sbjct: 266 KVIELEPQNFNAYFRLAYVKLKLKMYEEAIEYYDKYI 302
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI DF + ++ + +
Sbjct: 113 GLANHNLGNYEEAIKNYIKAIEISPN-VHTYNNIGLVKNDLGLYEDAIKDFNKVLELDKN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L E+I+ +KALE + NSA + GIV + A+E
Sbjct: 172 YFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLGKYKEALEYFD 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD +Y G++ ++ Y +A K I+L+ A+ L L
Sbjct: 232 KALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNFNAYFRLAYVKLKLKMY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWR 627
E+A+E + + + Y RG + L +K A+KD + + ++ +++ R
Sbjct: 292 EEAIEYYDKYIDCNNVSDDVYFNRGFAKYKLSDYKNAVKDFDKVNNNIKASILKMISKIR 351
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 34/145 (23%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ +I+ K + + + A++ + RG+ + + A+ D + +D AY
Sbjct: 18 GDYKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNN 77
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
+GL ++G YK+A + + KA++LD N C+Q
Sbjct: 78 IGLVNHNLGNYKEAIKYYSKALELDNN-----------------------CIQ------- 107
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKD 607
Y+ GL H LG +++AIK+
Sbjct: 108 ----VYNNIGLANHNLGNYEEAIKN 128
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ +I D L+ +I ++ N R S L +++ IRD +K + +DP + AY G
Sbjct: 20 YKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIG 79
Query: 111 CAFSALGRKEEALSVWEKGYE 131
LG +EA+ + K E
Sbjct: 80 LVNHNLGNYKEAIKYYSKALE 100
>gi|428223876|ref|YP_007107973.1| hypothetical protein GEI7407_0420 [Geitlerinema sp. PCC 7407]
gi|427983777|gb|AFY64921.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 273
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI+ +D++L P EA RG A AI+ F EAI++ P AW
Sbjct: 21 GRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHG 80
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A + E +AI+ AL F+P A I + G ++ A+E ++L
Sbjct: 81 KGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELRP 140
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ + G+AL+++ Y +A + A+ ++ N AW + + L ++A +
Sbjct: 141 ENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGF 200
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ L I R A++ R LG+ +AI D S + P+L
Sbjct: 201 TRSLKIKDRNPNAWYGRACCCASLGRTDEAI-DYLYRSLVLSPNL 244
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y+ AI+ F++ ++ P + A G+G A E E AI F A++ P
Sbjct: 47 RGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQP 106
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W G+A + L +AI+ K LE P + + RGI ++ A+
Sbjct: 107 QDAKIWYNHGKALSHLCNYPDAIESFDKTLELRPENYKAWYHRGIALTNLNRYDEAIASF 166
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRN 549
+ ++ A+ Y L L+ + Y++A + +++++ DRN
Sbjct: 167 DTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGFTRSLKIKDRN 210
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ W GQ + LG AI K L +P + RG K ++ A+ +
Sbjct: 8 QTWYSHGQVLSGLGRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEA 67
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++ + A+ G+ L+ + EY+ A ++ A++ + W + + L N
Sbjct: 68 IRAQPKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPD 127
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
A+E + L + KA++ RG+ L L ++ +AI + + + P+
Sbjct: 128 AIESFDKTLELRPENYKAWYHRGIALTNLNRYDEAIASFDT-ALVINPN----------- 175
Query: 630 CFNAWPFIRRRLLCTRLLKSTVSFAGLTLMEILIPSSRNIGAKDCIPRMYVKR 682
C+ AW + R L+ +L + +F G T R++ KD P + R
Sbjct: 176 CYYAWNY--RSLVLAKLDRYQEAFDGFT---------RSLKIKDRNPNAWYGR 217
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 65/165 (39%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GI +Y AI F+ L+ P + G A + AI F + ++
Sbjct: 80 GKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELR 139
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A L EAI AL PN + R +V K + A +
Sbjct: 140 PENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDG 199
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +K+ N +A+ +S+G +A + +++ L N
Sbjct: 200 FTRSLKIKDRNPNAWYGRACCCASLGRTDEAIDYLYRSLVLSPNL 244
>gi|434404736|ref|YP_007147621.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428258991|gb|AFZ24941.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 279
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 365 NKKFCVTRISKSK--------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK VT + S + + DF + +G Q G +AI+ + + + +P Y
Sbjct: 36 NKDVLVTEVGVSPPNRRTAKTTKAGDFYI-QGQNQHARGNSQAAIAAYSKAISLNPRYAP 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG A E AI+D+++A++ NP+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGNARASLGDNKTAIADYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D N A++D + + LD + AY G A ++ G+ + A
Sbjct: 155 RLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK--ALECLQQVLYI 580
+ +A++L+ NF A+ + AN +K AL+ LQ+ I
Sbjct: 215 IADYNEAVRLNPNFGPAYNNRGN--ARAANKDKMGALQDLQRAAAI 258
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ +G A+ ++Q + DP Y A RG ARA + + + AI+D+ EA++ N
Sbjct: 166 NRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLN 225
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
P+ G A+ RG ARAA + + A+QDL +A F+ D L+++ + N +
Sbjct: 226 PNFGPAYNNRGNARAANKDKMGALQDLQRAAAIFQKEGNDDLYQQVMKNIQ 276
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+GQ + A G S AI SKA+ P A RG+ F + A+ D S ++L+
Sbjct: 65 QGQNQHARGNSQAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNP 124
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G A +S+G+ K A + +AI+L N+ EA+ + + AL+
Sbjct: 125 NDAEAFNNRGNARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDY 184
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + +D +++ AY+ RG G + AI D + R
Sbjct: 185 NQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVR 223
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ +++AI NP A++ RG A +G AI D S+AL PN A+ + RG
Sbjct: 76 QAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGN 135
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D A+ D + ++L A+ G A ++ G+ A + + +AI LD +
Sbjct: 136 ARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYT 195
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ + + + A+ + + ++ F AY+ RG
Sbjct: 196 IAYNNRGNARAAKGDPQGAIADYNEAVRLNPNFGPAYNNRG 236
>gi|376005819|ref|ZP_09783211.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
gi|375325809|emb|CCE18964.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
Length = 631
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E + L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AL C +Q + ++ + + + +G +L L ++++A+
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEAL 492
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ +++ LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ ++ + G L + Y++A + +AI
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAI 560
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ + + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K + A+ + +
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++++ RG LL L ++++AI L
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASL 597
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISFKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ F+ +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARYEEALICYDRAISFKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
>gi|425452168|ref|ZP_18831986.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389766142|emb|CCI08140.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 695
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG I + +FK + A++D + + D + +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRR 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWP 635
+ + +D AY RG + L ++ AI D + N + L F
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQA---------LNFLEYSGLGFQ--- 413
Query: 636 FIRRR-----LLCTRLLKSTVSF-AGLTLMEILIP----SSRNIGAKDCIPRMYVKRFTD 685
RR L+ T++ +++ +F GL L +++I S+ N A+D + + ++
Sbjct: 414 -YRRHESGQGLIITKIFENSPAFKQGLILDDLIIAINGKSTLNKSAEDLVELTVNQMSSE 472
Query: 686 SLPCVILS-KRESSGD 700
S+ V L +R+ GD
Sbjct: 473 SVTQVTLKLRRKDRGD 488
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRRAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKET---SNEA-KRNKKFCVTRISKSKSISVDFR 384
+K +I+ +S+ R + KE+ NEA KRN K+ +R
Sbjct: 494 TKENIAVPRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAA-----------YR 542
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
R A+ G++ AI +Q + +P A RG + + + + A+ D+ +AI
Sbjct: 543 -ERADARDELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAIL 601
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
++P A+ RG LG++ AI D ++ + P+ A+ + RG+ + A+
Sbjct: 602 NDPQYRRAYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKAL 661
Query: 504 EDLSACVKLDKE 515
ED +L K+
Sbjct: 662 EDFKKAAELYKQ 673
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 42/259 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK++ + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLLLHG-LGQHKKAIKDLS 609
G + +++A+KD +
Sbjct: 579 GWIHSNRFKAYQEALKDYN 597
>gi|409994020|ref|ZP_11277142.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
Paraca]
gi|409935094|gb|EKN76636.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
Paraca]
Length = 636
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
K SN + S+ + D L +G A +NE +Y AI+ D+ L+ +P
Sbjct: 248 KSPSNHDNHELRLPPKHPPTSQPLIADDFLKKGEALINERQYKQAIASCDRALEINPDLD 307
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA +G A ++ A+ + ++ P +AW RG L +A+ ++A
Sbjct: 308 EAWYQKGNALVQLKQYSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQA 367
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L+ +PN H RG + KF+ + A+E +KL+ + + G LS + Y++
Sbjct: 368 LKIQPNDYAAWHNRGALLRKFQKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQE 427
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AIQ++ + W + + +AL C +Q + ++ + + + +G +L
Sbjct: 428 AISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVL 487
Query: 596 HGLGQHKKAI 605
L +H++A+
Sbjct: 488 VKLARHEEAV 497
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
C R K + D +RG V +Y+ A+S ++Q LK P A RG R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + L E+AL +V+ + +A+ RG+ L L +H AI
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAI 565
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ +K + + E RG + + + AIS + AIQ NP + W R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 509
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + L + A+ C
Sbjct: 510 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFD 569
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++++ RG LL L ++++AI L
Sbjct: 570 TAIALKPDHAESWRHRGALLSRLKKYQEAIASL 602
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + +
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 424 RYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQ 483
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 484 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 543
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + + A AI L + E+W H L ++A+ L
Sbjct: 544 AYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 603
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 604 KAISIQKEL 612
>gi|119357984|ref|YP_912628.1| hypothetical protein Cpha266_2203 [Chlorobium phaeobacteroides DSM
266]
gi|119355333|gb|ABL66204.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 331
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 6/214 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++ G +++ Y AI+ + + D +A RG A+ R+ AI D+T+A
Sbjct: 16 DDNVNSGNQKIDANDYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKA 75
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N + A+ RG + A G+ AI+D +KAL+ P A RG+ D
Sbjct: 76 ISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDLPG 135
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
A+ D + +++D +N AY G+ + IG ++ A KAI+L N ++A+ G
Sbjct: 136 AIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGRAK 195
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+DL+ A+ + + ID + Y RG
Sbjct: 196 MLMKDLSG---AIADFTKAIEIDPKNPIGYFNRG 226
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 11/237 (4%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R+ + +K+ S++ +F ++RG + G Y+ AI + + L+ +P A +
Sbjct: 63 RDYSGAIDDYTKAISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVN 122
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG ++ +L AI+D+T+AI+ +P A+ RG A +G A D +KA+E +P
Sbjct: 123 RGLSKDSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQP 182
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA- 539
N + RG KD + A+ D + +++D +N Y G A S I K +
Sbjct: 183 NMIQAFNNRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAIT 242
Query: 540 -HLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
KAI+LD NF A+ G+ D+ + + V+ ++ + AY+ RG
Sbjct: 243 DFSKAIELDPNFAAAYTGRGNARIMSGDI---NGGIADMTTVIKLNPNDASAYYNRG 296
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+++ + G AI+ + + ++ DP A + RG A + A +DFT+AI+
Sbjct: 121 VNRGLSKDSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIEL 180
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN--FKFKDFNAA 502
P+ +A+ RG+A+ + + AI D +KA+E +P + RG N +D A
Sbjct: 181 QPNMIQAFNNRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDA 240
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S ++LD +AYT G A G+ I+L+ N A+ + F
Sbjct: 241 ITDFSKAIELDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAF-- 298
Query: 563 DLANSEK--ALECLQQVLYIDKRFSKAYHL 590
+ N++K AL + + +D + ++ Y L
Sbjct: 299 KILNNDKNSALADFNKAIELDPKNAEMYKL 328
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--FQRELEAAISDFTEAIQ 443
+RG A++ + AI+ F + ++ DP P RG+A + R+ AI+DF++AI+
Sbjct: 190 NRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIE 249
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P+ A+ RG AR G+ I D++ ++ PN A + RG D N+A+
Sbjct: 250 LDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSAL 309
Query: 504 EDLSACVKLDKENKSAYTYL 523
D + ++LD +N Y L
Sbjct: 310 ADFNKAIELDPKNAEMYKLL 329
>gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120]
gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120]
Length = 225
Score = 88.6 bits (218), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 87/151 (57%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI+ F+ +++ +P + E RG A++ R+ AAISDF A++ N
Sbjct: 43 NQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLN 102
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG + LG+ +AI D ++ ++ +PNS D + G+ +F+ + A+ D
Sbjct: 103 PKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIAD 162
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ ++++ AY GLA ++G+ K A
Sbjct: 163 FNKALQINPNLADAYGNRGLAQYALGDSKSA 193
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI+DF +Q NP E + RG A++ L + AI D + AL P
Sbjct: 44 QGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLNP 103
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + RGI + DF A+ D + VK+D ++ Y LGLA G +++A
Sbjct: 104 KHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIADF 163
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
KA+Q++ N +A+G+ L +S+ A+ LQQ L++ + ++AY
Sbjct: 164 NKALQINPNLADAYGNRGLAQYALGDSKSAVTDLQQAAKLFLKQGDTQAYQ 214
Score = 75.5 bits (184), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ +++AIS F+ L+ +P + +A GRG + + + AI+DF + ++ +P
Sbjct: 78 RGLAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDP 137
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ + + G A G +AI D +KAL+ PN AD RG+ + D +AV DL
Sbjct: 138 NSQDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDL 197
Query: 507 SACVKL 512
KL
Sbjct: 198 QQAAKL 203
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 89/186 (47%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AA+S I + + + +G + G AI D + ++ P + RG
Sbjct: 20 MPAAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRG 79
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + +DF+AA+ D + ++L+ ++ AY G++ +G+++KA + +++D N
Sbjct: 80 LAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNS 139
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + +L + N ++A+ + L I+ + AY RGL + LG K A+ DL
Sbjct: 140 QDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDLQQ 199
Query: 611 GSRTMM 616
++ +
Sbjct: 200 AAKLFL 205
>gi|254411807|ref|ZP_05025583.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196181529|gb|EDX76517.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 639
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG N+GK SA++ Q ++ +P +A RG R + + A +D+T+ +Q +P
Sbjct: 387 RGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGNLRLELGDRQGAKADYTQVLQRDP 446
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW RGQ +A LG AI D ++A++ +PN +R + A++D
Sbjct: 447 NFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDC 506
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L AY GLA G+ + A + AIQL+ +A+ + Q++ +
Sbjct: 507 TTAINLRPNQALAYQNRGLARQRRGDSRGAITDYTVAIQLNPEAADAYYNRGVARQEIED 566
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ A+ Q + + ++ AY+ RGL LG AI DL ++
Sbjct: 567 TLGAIADYTQAIERNPDYALAYYERGLAQAQLGNRLAAINDLQQAAQ 613
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D RG ++ G A + + Q+L+ DP + A + RG +A +AAI+D+T
Sbjct: 414 NADAYYQRGNLRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYT 473
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AIQ P+ A+ +R ++R+ LG AI D + A+ PN A RG+ + D
Sbjct: 474 QAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDS 533
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + ++L+ E AY G+A I + A + +AI+ + ++ A+
Sbjct: 534 RGAITDYTVAIQLNPEAADAYYNRGVARQEIEDTLGAIADYTQAIERNPDYALAYYERGL 593
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSK 586
L N A+ LQQ + + K
Sbjct: 594 AQAQLGNRLAAINDLQQAAQLCRNLGK 620
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAI +++AI P A+ RG+ A G++ A+ DL++A++ P +AD ++RG
Sbjct: 364 EAAIDYYSQAITYQPQNATAYYYRGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGN 423
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + D A D + ++ D A+ G + +G + A + +AIQL N +
Sbjct: 424 LRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLV 483
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + +L N + A++ + + + AY RGL G + AI D +
Sbjct: 484 TAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDSRGAITDYT 541
>gi|284038657|ref|YP_003388587.1| hypothetical protein Slin_3793 [Spirosoma linguale DSM 74]
gi|283817950|gb|ADB39788.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 428
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + AI +D+ ++ + A + RG +++ Q + AI DF +I+ N
Sbjct: 48 NRGLAKATLKDHRGAILDYDKAIELNSKDALAYLSRGVSKSRQEDHRGAILDFGRSIELN 107
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A +A+ RG +R+ L + A+ D SKA+E EP +A + R + K DF ++ D
Sbjct: 108 PDAPQAYYNRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILD 167
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ + AY G + + ++ A KAI+L E++ H L
Sbjct: 168 FTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLD 227
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + AL ++ L + +AY+ RG LG K A++D +
Sbjct: 228 DYKGALPDYERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFN 271
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ +Y A++ F + ++ +P+ A R + + +I DFT+ I+ +
Sbjct: 116 NRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILDFTKVIEIS 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+KA+E P ++ RG K D+ A+ D
Sbjct: 176 PKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLDDYKGALPD 235
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQFY 561
+ L ++ AY G S +G+ K A + +AI+++ ++E G ++
Sbjct: 236 YERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVETKVVYNGRISHAI 295
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D N ++ ++ + ++AY RG+ H G K AI DL+
Sbjct: 296 LD--NLRNVVQERDKINELGSERAEAYFSRGVSKHRQGDSKAAIIDLT 341
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 14/240 (5%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---- 383
+ +S ++ +KSSD T + S M E + + N+ + + +D+
Sbjct: 12 FFESGVNRSKSSDFTGALQAFSMAITMNPENA-PSYYNRGLAKATLKDHRGAILDYDKAI 70
Query: 384 ---------RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
LSRG+++ + + AI F + ++ +P P+A RG +R+ + + A
Sbjct: 71 ELNSKDALAYLSRGVSKSRQEDHRGAILDFGRSIELNPDAPQAYYNRGISRSRLDQYQGA 130
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++DF++AI+ P A+ R + L + +I D +K +E P A RG
Sbjct: 131 LTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILDFTKVIEISPKRAQAYAGRGTSKV 190
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ DF A+ DL+ ++L ++ +Y + G A + +YK A + +A+ L + A+
Sbjct: 191 ELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLDDYKGALPDYERALALKPDHYRAY 250
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 36/260 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + +A +I F ++++ P +A GRGT++ + AI+D +AI+ +
Sbjct: 150 ARAVTKQKLNDFAGSILDFTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELS 209
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E++ RG A+ L + A+ D +AL +P+ + RG K D AV+D
Sbjct: 210 PQDSESYFHRGYAKGKLDDYKGALPDYERALALKPDHYRAYYGRGFCRSKLGDQKGAVQD 269
Query: 506 LSACVK------------------------------------LDKENKSAYTYLGLALSS 529
+ ++ L E AY G++
Sbjct: 270 FNQAIEVNNVYVETKVVYNGRISHAILDNLRNVVQERDKINELGSERAEAYFSRGVSKHR 329
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ K A KAI+L+ + EA+ L + + AL + + +++ ++
Sbjct: 330 QGDSKAAIIDLTKAIELNPAYAEAYFTLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFY 389
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
+RGL+ H LG DLS
Sbjct: 390 VRGLIKHSLGDENGGCLDLS 409
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
Y+K + D K + R+ L+ K D + A + FC +++ K DF +
Sbjct: 220 GYAKGKLDDYKGALPDYERA-LALKPDHYR-----AYYGRGFCRSKLGDQKGAVQDFNQA 273
Query: 387 RGIAQVN-------EGKYASAI--SIFDQILKEDPM------YPEALIGRGTARAFQREL 431
+ V G+ + AI ++ + + + D + EA RG ++ Q +
Sbjct: 274 IEVNNVYVETKVVYNGRISHAILDNLRNVVQERDKINELGSERAEAYFSRGVSKHRQGDS 333
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D T+AI+ NP+ EA+ G ++A G+ A+ D + A++ +P A++ + RG+
Sbjct: 334 KAAIIDLTKAIELNPAYAEAYFTLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 393
Query: 492 VNFKFKDFNAAVEDLSACVKL 512
+ D N DLS +L
Sbjct: 394 IKHSLGDENGGCLDLSKAGEL 414
>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 884
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ FD+ L+ +A RG A LE I+ F +A+Q
Sbjct: 521 NRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFK 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW RG A LG+ EAI KAL+F+P+ + RG F A+
Sbjct: 581 RDCHQAWNNRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIAS 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G+ ++A ++ KA+Q + EAW +L
Sbjct: 641 YDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ L +A++ RG L GLGQ K+AI
Sbjct: 701 QLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAI 740
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Q G+ AI+ +D+ L+ P Y +A RG A LE AI+ + A+Q
Sbjct: 327 NRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFK 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W R A LG EAI KAL+FEP+ + RGI K A+
Sbjct: 387 PEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIAS 446
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL +G ++A + KA+Q ++ +AW
Sbjct: 447 FDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAW----------Y 496
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N AL+ L ++ + +A++ RG+ L LGQ ++AI
Sbjct: 497 NRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAI 536
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+ I+ FD+ L+ +A RG A +LE AI+ + +A+Q
Sbjct: 555 NRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFK 614
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG+ EAI KAL+F+P+ + + RGI A+
Sbjct: 615 PDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIAS 674
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G+ ++A ++ A+Q + EAW + L
Sbjct: 675 YDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLG 734
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ + L I + +A + RG+ LG+ ++AI
Sbjct: 735 QLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAI 774
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L R IA G+ AI+ +D+ L+ +P +A RG A LE AI+ F +A+Q
Sbjct: 394 LDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQF 453
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG EAI KAL+F+P+ + RGI A++
Sbjct: 454 KPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGI----------ALD 503
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + A+ G+AL +G+ ++A KA+Q + +AW + DL
Sbjct: 504 KLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDL 563
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+ + + L + +A++ RG+ L LGQ ++AI
Sbjct: 564 GRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAI 604
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA N G+ AI+ +D+ L+ P PEA RG A +LE AI+ + A+Q
Sbjct: 657 SRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFK 716
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW RG A LG+ EAI KAL+ +P+ + RGI K A+
Sbjct: 717 SDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIAS 776
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ G AL +G +++A + KA+++ ++ A+ + Y L
Sbjct: 777 YDNALKFKTDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYANAF-YKKACYLALQ 835
Query: 566 NS-EKALECLQQVLYID 581
N + ALE LQQ + ++
Sbjct: 836 NQIDLALEKLQQAITLN 852
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ FD+ L+ P EA RG+A +E AI+ F +A+Q
Sbjct: 429 NRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFK 488
Query: 446 P------------------------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
P S +AW RG A LG+ EAI KAL+F+ +
Sbjct: 489 PDYHQAWYNRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLD 548
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ RG F + ++ ++ A+ G+AL +G+ ++A ++
Sbjct: 549 DHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYD 608
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA+Q + +AW + +L E+A+ + L +A++ RG+ L LGQ
Sbjct: 609 KALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQL 668
Query: 602 KKAI 605
++AI
Sbjct: 669 EEAI 672
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ AI+ F+Q L+ +A RG +++ L AI+ + +A+Q
Sbjct: 293 NRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFK 352
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI AL+F+P ++ +R I K A+
Sbjct: 353 PDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLGRLEEAIAS 412
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + ++ A G+AL +G ++A + KA+Q + EAW + +L
Sbjct: 413 YDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELG 472
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A++ RG+ L LG+ ++AI
Sbjct: 473 RIEEAIASFDKALQFKPDYHQAWYNRGIALDKLGRIEEAI 512
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ +D+ L+ P E RG A E+E AI+ F +A+Q
Sbjct: 259 NRGNALFNLGRIEEAIASYDKALQFKPDDYETWCNRGYAMDELGEIEEAIASFEQALQFK 318
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AWK RG +++ LG +AI KAL+F+P+ + RGI K A+
Sbjct: 319 RDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIAS 378
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ E + +AL +G ++A ++ KA+Q + + +A + + L
Sbjct: 379 YDNALQFKPEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLG 438
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L +A++ RG L LG+ ++AI
Sbjct: 439 RLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAI 478
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ +D+ L+ P PEA RG A +LE AI+ + +A+Q
Sbjct: 623 NRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDKALQFK 682
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG+ EAI AL+F+ + + + RG A+
Sbjct: 683 PDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIAS 742
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A G+A +G ++A ++ A++ + EAW + L
Sbjct: 743 YDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHEAWYNRGFALYKLG 802
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
E+A+ + L I ++ A++ + L
Sbjct: 803 RFEEAIISCNKALEIKLDYANAFYKKACYL 832
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ FD+ L+ +A RG A +E AI+ + +A+Q
Sbjct: 225 NRGIALRNLGRIEEAIASFDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFK 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A LGE EAI +AL+F+ + RG K A+
Sbjct: 285 PDDYETWCNRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIAS 344
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL +G ++A ++ A+Q E W + + L
Sbjct: 345 YDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLG 404
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L + +A + RG+ L LG+ ++AI
Sbjct: 405 RLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAI 444
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 3/239 (1%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
K + +S+ + +F L +G Q G AI +++ L P A RG A
Sbjct: 175 KLALAELSQGED---EFWLKQGNQQFRLGDLVDAIVCWEKALDITPDSHNAWNNRGIALR 231
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+E AI+ F +A+Q +AW RG A LG EAI KAL+F+P+ +
Sbjct: 232 NLGRIEEAIASFDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFKPDDYETW 291
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG + + A+ ++ ++ A+ G + S +G KA ++ KA+Q
Sbjct: 292 CNRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQF 351
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +AW + + L E+A+ L + + R + L LG+ ++AI
Sbjct: 352 KPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLGRLEEAI 410
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ AI+ +D+ L+ P Y +A RG AR +E AI+ + A++
Sbjct: 725 NRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFK 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW RG A LG EAI +KALE + + A+ +++ + A+E
Sbjct: 785 TDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYANAFYKKACYLALQNQIDLALEK 844
Query: 506 LSACVKLDKE 515
L + L+ +
Sbjct: 845 LQQAITLNPD 854
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR +L + I DKALQ P QA+ +G A LGR EEA++ +++ +
Sbjct: 463 NRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGIALDKLGRIEEAIASYDQAW--- 519
Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCE-----YDVSNSMSSLTVSESGLNANDK 184
++ L++ +LEE +T + + Y+ N++ L E G+ + DK
Sbjct: 520 YNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDK 575
>gi|428307393|ref|YP_007144218.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
9333]
gi|428248928|gb|AFZ14708.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
9333]
Length = 445
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
L + T+N ++ + T + + + VDF L G+ +V +G + AI+++D+
Sbjct: 209 LGIGINTFLATNNTFQKPQIISATAVEERGA--VDF-LRGGLDKVAKGDFNGAIALYDRA 265
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ +P EA RG AR+ Q++ AI+D+ AI NP+ EA+ RG AR+ +
Sbjct: 266 ISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSKQQDFTG 325
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D +A+ PN A+ + RG+ KDFN A+ D + L+ AY G
Sbjct: 326 AIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYDRAISLNPNLAEAYANRGF 383
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + + AI+ + AI NP+ EA+ RG AR+ + AI D +A+ PN
Sbjct: 246 GLDKVAKGDFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPN 305
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ + RG+ K +DF A+ D + L+ AY GLA S ++ A +
Sbjct: 306 LAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYD 365
Query: 542 KAIQLDRNFLEAWGH 556
+AI L+ N EA+ +
Sbjct: 366 RAISLNPNLAEAYAN 380
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R G + A G+ AI +A+ PN A+ + RG+ K +DF A+ D +
Sbjct: 242 FLRGGLDKVAKGDFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAIS 301
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ AY GLA S ++ A + +AI L+ N EA+ + + A+
Sbjct: 302 LNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAI 361
Query: 572 ECLQQVLYIDKRFSKAYHLRGLL 594
+ + ++ ++AY RG +
Sbjct: 362 ADYDRAISLNPNLAEAYANRGFV 384
>gi|291569669|dbj|BAI91941.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 636
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 272 IADDF-LKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQLKQYSEALECY 330
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++ P +AW RG L +A+ ++AL+ +PN H RG + KF+
Sbjct: 331 DRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKFQK 390
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E +KL+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 391 YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 450
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AL C +Q + ++ + + + +G +L L +H++A+
Sbjct: 451 MALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAV 497
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
C R K + D +RG V +Y+ A+S ++Q LK P A RG R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + L E+AL +V+ + +A+ RG+ L L +H AI
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAI 565
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ +K + + E RG + + + AIS + AIQ NP + W R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 509
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + L + A+ C
Sbjct: 510 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFD 569
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++++ RG LL L ++++AI L
Sbjct: 570 TAIALKPDHAESWRHRGALLSRLKKYQEAIASL 602
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + +
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 424 RYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQ 483
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 484 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 543
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + + A AI L + E+W H L ++A+ L
Sbjct: 544 AYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 603
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 604 KAISIQKEL 612
>gi|296446900|ref|ZP_06888836.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296255575|gb|EFH02666.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 346
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G A AI +D +++ P EA IGR AR +L+ AI+D+ +A+Q + + A
Sbjct: 132 KGDVAGAIGDYDTLIEAQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALA 191
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A A G+ A+ D A++ EP SA L +R D + A+ D A + D
Sbjct: 192 NRGRAYKAKGDLDHALADFDAAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARD 251
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ +Y GLAL + G+Y KA KAI+LD + A+ + + E A
Sbjct: 252 GKQAVSYNNRGLALHAKGDYDKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKAD 311
Query: 574 LQQVLYIDKRFSKA 587
L+Q L +D + A
Sbjct: 312 LEQALRLDPNLAAA 325
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQ 443
++RG A +G Y AI+ +D L+ D A + A + ++ AI D+ I+
Sbjct: 88 VNRGGAYHAKGDYDLAIADYDMALQMDRRAAAAALSARAAAKRAKGDVAGAIGDYDTLIE 147
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ P + EA+ R AR + G+ AI D KAL+ + SA L RG D + A+
Sbjct: 148 AQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHAL 207
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D A VKL E KSA +A+ LDR FYQ
Sbjct: 208 ADFDAAVKL--EPKSA----------------------RAL-LDR---------AAFYQA 233
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + AL + D + + +Y+ RGL LH G + KA+ D S
Sbjct: 234 KGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDYDKALADFS 279
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + + R A+ + G AI+ +D+ L+ D AL RG A + +L+ A++DF
Sbjct: 152 STEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHALADFD 211
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ P + A R A G+ A+ D A+ + A + RG+ D+
Sbjct: 212 AAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDY 271
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D S ++LD + AY AL E + A+ +A++LD N A L
Sbjct: 272 DKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKADLEQALRLDPNLAAAKKALDD 331
Query: 560 FYQDLAN 566
+ LAN
Sbjct: 332 VTKLLAN 338
>gi|354567785|ref|ZP_08986953.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353542243|gb|EHC11707.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 310
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 3/246 (1%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++ +F +G+ + ++ AI+ D L+ P YPEA +G A E AI+
Sbjct: 10 NLEAEFFFQQGLRRNRVQEFEVAIANLDTALRCKPDYPEAWFQKGFALGSLGRHEDAIAC 69
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F E ++ + W R A L EA+ + +A+EF PN+A I H RG+ +
Sbjct: 70 FDEMLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDLQ 129
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + C+KL + A+ G A + Y++A ++ +AI+ + + AW +
Sbjct: 130 QYQQAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNVMAWFNR 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
+ + +KA++ + L I + KA+ +G+ + + +AI + ++ + P
Sbjct: 190 GVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNKGIAWEHIENYDEAIASYNQAAK-LQP 248
Query: 618 H--LIW 621
+ +IW
Sbjct: 249 NDPVIW 254
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + K +S +R IA ++ A+ FD+ ++ +P RG
Sbjct: 69 CFDEMLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDL 128
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI F + ++ P A AW +G A+ L EA+ +A+EF ++
Sbjct: 129 QQYQQAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNVMAWFN 188
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ ++K + A++ + + A+ G+A I Y +A ++ +A +L
Sbjct: 189 RGVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNKGIAWEHIENYDEAIASYNQAAKLQP 248
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVL 578
N W + + Y N A+ L+Q +
Sbjct: 249 NDPVIWYNTARCYAQKHNIPVAVANLEQAI 278
>gi|145480427|ref|XP_001426236.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393310|emb|CAK58838.1| unnamed protein product [Paramecium tetraurelia]
Length = 821
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 22/251 (8%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +F +RG+ + G SA+ +++ ++ DPM P+ RG E A+ D+
Sbjct: 217 NAEFYYNRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEMGNKEQALLDYN 276
Query: 440 EAIQSNPSAGEAWKRRG--------QARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ I +P+ + RG + +G +A+ D +KA++ +P+S+ + RG+
Sbjct: 277 QVILLDPTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGV 336
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---- 547
+ ++ K+++ A+ D ++LD + Y G+ IG ++A + +AI LD
Sbjct: 337 IYYEMKNYDQALLDYDKAIELDATDPKIYYNRGILYQDIGNIQQALLNYTQAIHLDPMNP 396
Query: 548 -------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
N + G+L Y ++ N + AL +V+ ++ KAY RG+L +G
Sbjct: 397 KYYYNRGNNNIYGLGNL---YGEMGNKDLALLDYDKVIQLNPNDEKAYCNRGILHKDMGN 453
Query: 601 HKKAIKDLSSG 611
+KA+ D +
Sbjct: 454 QEKALLDYNQA 464
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
+RGI + G A+ + Q + DPM P+ RG + + A+ D
Sbjct: 367 NRGILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNRGNNNIYGLGNLYGEMGNKDLALLD 426
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF--- 494
+ + IQ NP+ +A+ RG +G +A+ D ++AL P A RGI+ F
Sbjct: 427 YDKVIQLNPNDEKAYCNRGILHKDMGNQEKALLDYNQALILNPMEAITYINRGILRFIKG 486
Query: 495 KFKDFNAAVE----DLSACVKLDKENKSAY-TYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+F E D + ++LD N AY +GL +G+ + A + AI LD
Sbjct: 487 ILNNFMGNKEKSLIDYNKSIELDPLNSFAYINRVGLLYDELGKKEFALVDYNNAIFLDSK 546
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y+ L N E+AL L + +D +++ AY RG + +G + A+ D S
Sbjct: 547 NSKFYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYS 606
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 423 TARAFQRE--LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+A FQR+ + + D +AIQ NP+ G A+ R G + G+ EA++ +KA+E +
Sbjct: 122 SATVFQRKKMFQESQEDCEKAIQINPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDE 181
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+RG + + A++D + +++D +N Y G+ +G + A +
Sbjct: 182 KCCYAYIKRGEICIQIGQKQQALKDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDY 241
Query: 541 LKAIQLDRNFLEAWGHLTQFYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHG 597
KAI+LD ++ H + Q ++ N E+AL QV+ +D S+ Y RG L L+
Sbjct: 242 NKAIELDP--MDPKFHFHRGIQNNEMGNKEQALLDYNQVILLDPTHSRTYCNRGFLNLYK 299
Query: 598 LGQHKKAI 605
+G +K I
Sbjct: 300 IGIVQKNI 307
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-------AFQRELEAAISDF 438
+RGI + G A+ ++Q L +PM I RG R F E ++ D+
Sbjct: 443 NRGILHKDMGNQEKALLDYNQALILNPMEAITYINRGILRFIKGILNNFMGNKEKSLIDY 502
Query: 439 TEAIQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
++I+ +P A+ R G LG+ A+ D + A+ + ++ ++RG++
Sbjct: 503 NKSIELDPLNSFAYINRVGLLYDELGKKEFALVDYNNAIFLDSKNSKFYYKRGVLYESLG 562
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ DLS ++LD + AY G IG + A + + AIQLD L+A +
Sbjct: 563 NKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAIQLDP--LKAINYY 620
Query: 558 TQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ Y +L N+E+A+ + +D ++Y RG++ GQ+ + D
Sbjct: 621 NRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSD 672
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P Y A + G + Q ++ A+ + +AI+ + A+ +RG+ +G+ +A++
Sbjct: 146 NPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQIGQKQQALK 205
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D + ++ +P +A+ + RG++N + +A+ D + ++LD + + + G+ + +
Sbjct: 206 DYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEM 265
Query: 531 GEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G ++A + + I LD R FL + + +++ N ++A+ + + +D
Sbjct: 266 GNKEQALLDYNQVILLDPTHSRTYCNRGFLNLY-KIGIVQKNIGNKDQAVVDFNKAIQLD 324
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKD 607
S Y+ RG++ + + + +A+ D
Sbjct: 325 PSSSMFYYNRGVIYYEMKNYDQALLD 350
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ D + +IQ + A+ RG +G A+ D S A++ +P A + RG+
Sbjct: 565 EQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAIQLDPLKAINYYNRGV 624
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDRN 549
+ + + A+ D S +KLD + +Y G+ + G+Y +L+A +Q D
Sbjct: 625 LYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSDYLRANHLQPDNP 684
Query: 550 FL-EAWGHLTQFYQDLANS 567
F+ + L Q+ NS
Sbjct: 685 FISQVLEQLYSLQQNQPNS 703
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F RG+ + G A+ ++ D Y A + RG+ + A+ D++ AI
Sbjct: 550 FYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAI 609
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P + RG LG + +AI D S A++ +PN RG++ +N
Sbjct: 610 QLDPLKAINYYNRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFG 669
Query: 503 VEDLSACVKLDKEN 516
+ D L +N
Sbjct: 670 LSDYLRANHLQPDN 683
>gi|300868979|ref|ZP_07113583.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333046|emb|CBN58775.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 328
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ KS +I D+ +RG+A G + AI+ FD+ L P Y EA RG A
Sbjct: 93 AIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEAWYNRGVAL 152
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + +A+ P EAW RG A LG+ AI KA+E + + +
Sbjct: 153 GKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIELKIDKHEA 212
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ ++L + A+ G+AL+S+ ++ A + KA+
Sbjct: 213 WNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLERFEDAIASFDKALA 272
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ ++ EAW + + L + E A+ + L I + +A+H R + +
Sbjct: 273 IKPDYHEAWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNRSMAI 322
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + AI+ FD+ L P Y EA RG A + E AI+ F +A+
Sbjct: 79 SRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQ 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI KAL +P+ + + RG+ K F A+
Sbjct: 139 PDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAA 198
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + A+ G+AL ++G ++ A ++ +AI+L + EAW + L
Sbjct: 199 YDKAIELKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLE 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + L I + +A++ RG+ L LG + AI
Sbjct: 259 RFEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAI 298
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG Q +G + AI+ + + + P + + G A + + AI+ + + I+
Sbjct: 10 FSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEF 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG L EAI K+L +P+ + + RG+ KF DF A+
Sbjct: 70 KPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIA 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+ + + A+ G+AL +G ++ A ++ KA+ + ++ EAW G L
Sbjct: 130 SFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKL 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
QF +A +KA+E L IDK +A++ RG+ L LG+ + AI
Sbjct: 190 GQFEGAIAAYDKAIE-----LKIDKH--EAWNNRGIALKNLGRFEDAI 230
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 20/266 (7%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF + G A G+Y AI+ +D+ ++ P +A RG
Sbjct: 25 AIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEFKPDLYQAWYSRGNVL 84
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R L AI+ F +++ P EAW RG A G+ +AI KAL +P+ +
Sbjct: 85 YRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEA 144
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ K F A+ + + + A+ G+AL +G+++ A A+ KAI+
Sbjct: 145 WYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIE 204
Query: 546 LDRNFLEAWG-------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
L + EAW +L +F +A+ ++A+E L IDK +A+ RG+ L+ L
Sbjct: 205 LKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIE-----LKIDKH--EAWINRGIALNSL 257
Query: 599 GQHKKAIKDLSSGSRTMMP--HLIWN 622
+ + AI + + P H WN
Sbjct: 258 ERFEDAIASFDK-ALAIKPDYHEAWN 282
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG + + + E AI+ + +AI P + W G+A LG+ EAI K
Sbjct: 7 EEWFSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKG 66
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+EF+P+ + RG V ++ + A+ + + + A+ G+AL G+++
Sbjct: 67 IEFKPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFED 126
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + KA+ + ++ EAW + L E A+ + L I + +A++ RG+ L
Sbjct: 127 AIASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMAL 186
Query: 596 HGLGQHKKAI 605
LGQ + AI
Sbjct: 187 GKLGQFEGAI 196
>gi|411120171|ref|ZP_11392547.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710327|gb|EKQ67838.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 272
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ + I V F +G+ + Y +AI+ +D +L P YP+A RG A E
Sbjct: 1 MADFREIEVVFLFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYE 60
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ + +A++ P EAW RG A L EAI +A++F+P+ + RGI
Sbjct: 61 EAIASYDQALEYEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGIA 120
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A++ ++ + A+ L L +G ++ ++ KA++ +F E
Sbjct: 121 LRNLNRYEEAIDSYDRAIEFKPDYYWAWYNRALVLKQLGRLQQVVASYDKALEFKPDFEE 180
Query: 553 AWG-------HLTQFYQDLANSEKALE 572
AW HL Q +++ +KALE
Sbjct: 181 AWTNRGNALYHLGQLEAAISSYDKALE 207
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G Q + AAI+ + + P +AW RG A LG EAI +ALE
Sbjct: 12 LFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQALE 71
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+EP ++ + RG + + A+ +K A+ G+AL ++ Y++A
Sbjct: 72 YEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGIALRNLNRYEEAI 131
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+++ +AI+ ++ AW + + L ++ + + L F +A+ RG L+
Sbjct: 132 DSYDRAIEFKPDYYWAWYNRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNRGNALYH 191
Query: 598 LGQHKKAIK--DLSSGSRTMMPHLIWN 622
LGQ + AI D + R P+ ++N
Sbjct: 192 LGQLEAAISSYDKALELRPDNPNTLYN 218
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A G Y AI+ +DQ L+ +P + EA RG+A + AI+ + +A
Sbjct: 44 DAWYNRGNAFYRLGHYEEAIASYDQALEYEPGFSEAWNNRGSALDDLQRYAEAIASYDQA 103
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ PS AW RG A L EAI +A+EF+P+ + R +V +
Sbjct: 104 IKFKPSYCWAWYNRGIALRNLNRYEEAIDSYDRAIEFKPDYYWAWYNRALVLKQLGRLQQ 163
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
V ++ + + A+T G AL +G+ + A ++ KA++L
Sbjct: 164 VVASYDKALEFKPDFEEAWTNRGNALYHLGQLEAAISSYDKALEL 208
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
L ++G+ + D+ AA+ A + + A+ G A +G Y++A ++ +A+
Sbjct: 11 FLFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQAL 70
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + F EAW + DL +A+ Q + + A++ RG+ L L ++++A
Sbjct: 71 EYEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGIALRNLNRYEEA 130
Query: 605 IKDLSSGSRTMMPHLIW 621
I D + P W
Sbjct: 131 I-DSYDRAIEFKPDYYW 146
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ ++ +D+ L+ P + EA RG A +LEAAIS + +A++ P
Sbjct: 159 GRLQQVVASYDKALEFKPDFEEAWTNRGNALYHLGQLEAAISSYDKALELRPDNPNTLYN 218
Query: 455 RGQARAALGESVEAIQDLSKALEFEPN 481
+ A G+ A + L +A+E P+
Sbjct: 219 KACCYALQGKYELAFESLQRAVELNPH 245
>gi|440752492|ref|ZP_20931695.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176985|gb|ELP56258.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 801
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P Y +A RG A E I+ + A++
Sbjct: 579 NRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYDRALEIK 638
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ + + RG F A+
Sbjct: 639 PDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIAS 698
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G +++A ++ +A++ + N+ A+ + Y
Sbjct: 699 YDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNKACCYGLQN 758
Query: 566 NSEKALECLQQVLYIDKRFS 585
N E A+E LQ+ + +D ++
Sbjct: 759 NVELAIENLQRAINLDVKYQ 778
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A E AI+ + A++ P EAW R
Sbjct: 487 QYQEAIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNR 546
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI KALEF+P+ + + RG F F A+ ++ +
Sbjct: 547 GNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPD 606
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++G +++ ++ +A+++ + EAW + +L E+A+
Sbjct: 607 YHQAWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYD 666
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L +A++ RG L LG+ +AI
Sbjct: 667 RALEFKPDDHEAWYNRGNALFNLGRLAEAI 696
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + RG A + G++ AI+ +D+ L+ P Y EA RG A
Sbjct: 491 AIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNAL 550
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
L AI+ + +A++ P EAW RG A LG EAI +ALEF+P+
Sbjct: 551 FNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQA 610
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG F + +++ + A+ G+AL ++G ++A ++ +A++
Sbjct: 611 WYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYDRALE 670
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + +L +A+ + L + +A++ RG L LG+ ++AI
Sbjct: 671 FKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAI 730
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ A AI+ +D+ L+ P Y EA RG A E AI+ + A++
Sbjct: 545 NRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFK 604
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG E I +ALE +P+ + + RG+ A+
Sbjct: 605 PDYHQAWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIAS 664
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G AL ++G +A ++ KA++ ++ EAW + +L
Sbjct: 665 YDRALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLG 724
Query: 566 NSEKALECLQQVLYIDKRFSKAYH 589
E+A+ + L + ++ AY+
Sbjct: 725 RFEEAIASYDRALEFNSNYANAYY 748
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + +GT + + + AI+ + +A++ P EAW R
Sbjct: 453 RYQDALKGFNRLVSLLPQWEDGWFYQGTTFYYLEQYQEAIASYDKALEIKPDYHEAWNNR 512
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG F A+ ++ +
Sbjct: 513 GNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNALFNLGRLAEAIASYDKALEFKPD 572
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G AL ++G +++A ++ +A++ ++ +AW G+L +F +++A+ +
Sbjct: 573 YHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYD 632
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ALE I +A++ RG+ L LG+ ++AI
Sbjct: 633 RALE-------IKPDKHEAWNNRGVALGNLGRLEEAI 662
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 406 QILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
Q+ K+ P M P +L G + + A+ F + P + W +G L
Sbjct: 428 QLFKQKPEEMLP-SLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFYYLE 486
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ EAI KALE +P+ + + RG F A+ +++ + A+
Sbjct: 487 QYQEAIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNR 546
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G AL ++G +A ++ KA++ ++ EAW + +L E+A+ + L
Sbjct: 547 GNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPD 606
Query: 584 FSKAYHLRGLLLHGLGQHKKAI 605
+ +A++ RG L LG+ ++ I
Sbjct: 607 YHQAWYNRGNALGNLGRFEEEI 628
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ A AI+ +D+ L+ P Y EA RG A E AI+ + A++ N
Sbjct: 681 NRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFN 740
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
+ A+ + L +VE AI++L +A+ + D+
Sbjct: 741 SNYANAYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 780
>gi|296126637|ref|YP_003633889.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 804
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G Y AI + +I+++D R A+ E A+ D+ +AI+ NP
Sbjct: 300 GLIEYKLGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPD 359
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 360 DTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFD 419
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L EN Y + GL + E+ +A + KAI+L+ +++A+ Y N
Sbjct: 420 KAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENY 479
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A++ ++VL +D AY+ L L + A+K
Sbjct: 480 DEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVK 518
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ DF +AI E + RG L E EA++ ++KA+E D +ER I+
Sbjct: 414 ALEDFDKAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIY 473
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ ++++ A++D ++LD EN AY +L L+ + +Y A + + K I+LD N LEA
Sbjct: 474 YRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEA 533
Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + L + +L N +A+E ++++ +DK + AY G+ + ++ K+I+
Sbjct: 534 YYNRALAKMEINLYN--EAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIE 586
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 117/276 (42%), Gaps = 40/276 (14%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
I+ + + VD +R I++ N Y AI FD++++ P +A RG ++++ +
Sbjct: 74 EINITHNTLVDAYYNRAISKFNLKNYEEAIKDFDKVIELSPDKTDAYYNRGHSKSYLKRY 133
Query: 432 EAAISDFTEAIQSNPSAGEA---------------------------------------W 452
E I DF + ++ + EA +
Sbjct: 134 EEGIEDFKKVLEFDEDDFEAVYYVGLGYFYLANYEEAIKNFDLALYLIEKTEEEYIADIY 193
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG +++ L EA+ D +K ++ + ++ + + + F + A+ D ++L
Sbjct: 194 YYRGHSKSYLTRYEEALSDFNKLVQLREDDSEAFYFKALTEFYLGLYEEAINDFDISIEL 253
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKAL 571
D +AY + GL+ S++ Y +A E + KAI D N + + L N ++A+
Sbjct: 254 DSNASNAYYFRGLSKSNLELYDEAREDYQKAIDFDPENIISIYNDAGLIEYKLGNYKEAI 313
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +++ D+ S Y+ R L L ++ A+KD
Sbjct: 314 KYYTKIIEKDEYISYIYYNRALAKEALELYEDALKD 349
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ ++ A+ ++ ++ + Y +A R + AI DF +
Sbjct: 430 EFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENYDEAIKDFKKV 489
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ + A+ + L + A++ +K +E + NS + + R + + +N
Sbjct: 490 LELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRALAKMEINLYNE 549
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ED ++LDKEN AY +G+ + EY K+ E + K I++D L+A+
Sbjct: 550 AIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIEIDNKALDAY 602
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AIS++D+ E RG + E + A+ +AI+ N +A+ R
Sbjct: 421 AISLYDEN-------SEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIY 473
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
EAI+D K LE + + + + +D++ AV+ + ++LD + A
Sbjct: 474 YRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEA 533
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y LA I Y +A E + I+LD+ +A+ ++ Y + K++E +V+
Sbjct: 534 YYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIE 593
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID + AY+ RGL L + +A +D
Sbjct: 594 IDNKALDAYYNRGLSKVALKLYNEAFEDF 622
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D R I Y AI F ++L+ D A + + + A+ +T+
Sbjct: 463 IDAYNERAIIYYRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTK 522
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ + ++ EA+ R A+ + EAI+D + +E + + D GI +++N
Sbjct: 523 VIELDNNSLEAYYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYN 582
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
++E + +++D + AY GL+ ++ Y +A E ++AI ++ N+L A+ +
Sbjct: 583 KSIEYYTKVIEIDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDINSNYLNAYNGIGFS 642
Query: 561 YQDLANSE-------KALECLQQVLYIDKRFSKAYHLRGLLL 595
+N+E KA+E L L Y+ +GL L
Sbjct: 643 KTKYSNNELKKGNINKAIELLNDAL--------VYYNKGLAL 676
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 49 LRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L N+ +AI+ ++ + I I NRA LEL++ ++D DKA++L+P +Y
Sbjct: 306 LGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPDDTYSYN 365
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G + + +EAL + K E
Sbjct: 366 NRGLIKNEMQMYDEALEDYNKAIE 389
>gi|284035302|ref|YP_003385232.1| hypothetical protein Slin_0369 [Spirosoma linguale DSM 74]
gi|283814595|gb|ADB36433.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 446
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N + AI +D+ ++ + A + RG +++ Q + A+ DF+ +I+ N
Sbjct: 66 NRGLAKANLKDHRGAILDYDKAIELNSKDAMAYLSRGVSKSRQDDHRGALLDFSRSIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG +R+ + + A+ D SKA+E EP +A + R I K DF ++ D
Sbjct: 126 PDDPQAYYNRGISRSRIDQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++ + AY GL+ + ++ A KAI+L E++ + L
Sbjct: 186 FSKVIEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLD 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + AL ++ L + +AY+ RG LG K A++D +
Sbjct: 246 DYKAALPDYERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFN 289
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---- 383
+ +S I+ +KSSD T + S M E + + N+ + + +D+
Sbjct: 30 FFESGINRSKSSDFTGALQAFSMAITMNPENA-PSYYNRGLAKANLKDHRGAILDYDKAI 88
Query: 384 ---------RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
LSRG+++ + + A+ F + ++ +P P+A RG +R+ + + A
Sbjct: 89 ELNSKDAMAYLSRGVSKSRQDDHRGALLDFSRSIELNPDDPQAYYNRGISRSRIDQYQGA 148
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++DF++AI+ P+ ++ R R L + ++ D SK +E P A RG+
Sbjct: 149 LTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKVIEITPKRAQAYAGRGLSKV 208
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ DF A+ DL+ ++L E+ +Y Y A + +YK A + +A+ L + A+
Sbjct: 209 ELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPDYERALALKPDNYRAY 268
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L + + A++ Q + I+ +
Sbjct: 269 YGRGFCRSKLGDQKGAVQDFNQAIEINNVY 298
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ +Y A++ F + ++ +P + R R + +++DF++ I+
Sbjct: 134 NRGISRSRIDQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKVIEIT 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+KA+E P + R K D+ AA+ D
Sbjct: 194 PKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQFY 561
+ L +N AY G S +G+ K A + +AI+++ +++ G +++
Sbjct: 254 YERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRISRAI 313
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D N ++ ++ + ++AY RG+ + G K AI DL+
Sbjct: 314 LD--NLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDSKAAIVDLN 359
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 49/298 (16%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
+A N+ +RI + + DF +R I + +A +++ F ++
Sbjct: 130 QAYYNRGISRSRIDQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKV 189
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P +A GRG ++ + AI+D +AI+ +P GE++ R A+ L +
Sbjct: 190 IEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKA 249
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK------------- 514
A+ D +AL +P++ + RG K D AV+D + ++++
Sbjct: 250 ALPDYERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRI 309
Query: 515 -----------------------ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
E AY G++ + G+ K A KAI+L+ +
Sbjct: 310 SRAILDNLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYS 369
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + + AL + + +++ +++RGL+ H LG DLS
Sbjct: 370 EAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGLIKHSLGDENGGCLDLS 427
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
+Y+K + D K++ R+ L+ K D + A + FC +++ K DF +
Sbjct: 238 AYAKGKLDDYKAALPDYERA-LALKPDNYR-----AYYGRGFCRSKLGDQKGAVQDFNQA 291
Query: 387 RGIAQVN-------EGKYASAI--SIFDQILKEDPM------YPEALIGRGTARAFQREL 431
I V G+ + AI ++ + + + D + EA RG ++ Q +
Sbjct: 292 IEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDS 351
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D +AI+ NP+ EA+ RG ++A G+ A+ D + A++ +P A++ + RG+
Sbjct: 352 KAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 411
Query: 492 VNFKFKDFNAAVEDLSACVKL 512
+ D N DLS +L
Sbjct: 412 IKHSLGDENGGCLDLSKAGEL 432
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG+++ +G +AI ++ ++ +P Y EA RG ++ Q + + A++D AI+
Sbjct: 339 FSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKL 398
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P E + RG + +LG+ DLSKA E N A
Sbjct: 399 KPGYAEVFYVRGLIKHSLGDENGGCLDLSKAGELGYNPA 437
>gi|425466275|ref|ZP_18845578.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
gi|389831304|emb|CCI26077.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
Length = 423
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ I+ +F + +RG N+ KY A+S ++ + +P Y EA RG ++
Sbjct: 159 KAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKY 218
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+SD +AI+ NP+ EA+ RG L + A+ D SKA++ PN A+ RG+
Sbjct: 219 ELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSDYSKAIDINPNLAEAYVNRGV 278
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + ++ A+ D S +++++ Y G+ +Y A KAI+++ N+
Sbjct: 279 LYRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYA 338
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + Y E AL + + I+ ++AY RG L LGQ +KA DL
Sbjct: 339 EAYVNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGRGGLYAILGQPEKAKIDLQQA 398
Query: 612 S 612
+
Sbjct: 399 A 399
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY A++ +D+ ++ +P + RG Q++ E A+SD +AI N
Sbjct: 139 NRGNLYYDLQKYDLALADYDKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDIN 198
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG L + A+ D++KA+E PN A+ + RG++ + ++ A+ D
Sbjct: 199 PNYAEAYYNRGNIYYDLQKYELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSD 258
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + ++ AY G+ +Y A + KAI+++RN + + Y+
Sbjct: 259 YSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQE 318
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AL + + I+ +++AY RG+L G +++ A+ D +
Sbjct: 319 KYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYN 362
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG Q++ E A+ D+ +AI+ NP+ A+ RG L + A+ D KA+E
Sbjct: 104 VNRGILYRRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYDLALADYDKAIEI 163
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PN A + + RG V + + + A+ D++ + ++ AY G + +Y+ A
Sbjct: 164 NPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKYELALS 223
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
KAI+L+ N+ EA+ + Y+DL + AL + + I+ ++AY RG+L
Sbjct: 224 DINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQ 283
Query: 599 GQHKKAIKDLS 609
++ A+ D S
Sbjct: 284 EKYDLALSDYS 294
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+K+ + SK+I ++ L+ RG+ + KY A+S + + ++ +
Sbjct: 250 QKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYYN 309
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q + + A++D+ +AI+ NP+ EA+ RG + A+ D +KA+E P
Sbjct: 310 RGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYNKAIEINP 369
Query: 481 NSADILHERGIVNFKFKDFNAAVEDL--SACVKLDKENKSAYTYLGLALSSIG 531
N A RG + A DL +A + L + N +AY + L +G
Sbjct: 370 NLAQAYLGRGGLYAILGQPEKAKIDLQQAAILFLQQNNMAAYEKVMQILQQLG 422
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 11 YRLNKTHK-TICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLA 64
YRL + + + + + + ++ +A R L +L +L +W+KAI I + A
Sbjct: 280 YRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEI-NPNYA 338
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
++Y NR Y + ++ + D +KA++++P L QAY+ +G ++ LG+ E+A
Sbjct: 339 EAY-----VNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGRGGLYAILGQPEKA 391
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSY 67
L K + + + + ++ +A A R L +L +L ++SKAI I +L Y
Sbjct: 249 LQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYY 308
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y E + + D +KA++++P +AY+ +G + + E ALS +
Sbjct: 309 ------NRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYN 362
Query: 128 KGYE 131
K E
Sbjct: 363 KAIE 366
>gi|167753497|ref|ZP_02425624.1| hypothetical protein ALIPUT_01771 [Alistipes putredinis DSM 17216]
gi|167658122|gb|EDS02252.1| tetratricopeptide repeat protein [Alistipes putredinis DSM 17216]
Length = 671
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ N A + F + ++P++ A I R R + A+ DF EAI P
Sbjct: 69 RGVAKFNLDDLLGADTDFSAAIVKNPVFTTAYIYRALTRTRMGNYDDALQDFREAIDLRP 128
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG R + EAI+D K + E AD RG KD A+E+
Sbjct: 129 DLPDAYYSRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENF 188
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++EN + Y G L EY +AE +I+ D FL + + Y +
Sbjct: 189 DQAIRTNRENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNR 248
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AL +VL +D S Y R +L +G + +A+ D
Sbjct: 249 PMQALADFDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDF 290
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG ++ +Y AI FD+ + ++ +A IGRGTA + ++ A+ +F +AI++N
Sbjct: 136 SRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENFDQAIRTN 195
Query: 446 PSAGEAWKRRG----------QARAALGESV------------------------EAIQD 471
+ +RG +A A S+ +A+ D
Sbjct: 196 RENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNRPMQALAD 255
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ L+ + ++ R I+ + D+N A++D N Y + + +G
Sbjct: 256 FDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRAMLKTRLG 315
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
+ + AE + +AI+L +F A+
Sbjct: 316 DLEGAERDYTRAIELYPDFANAY 338
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ D+ L+ P + EA RGT A +L A DF+ AI+ NP EA+ RG
Sbjct: 570 YDEAIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRG 629
Query: 457 QARAALGESVEAIQDLSKALEFEPNSA 483
+ + ++ + DLSKA E SA
Sbjct: 630 MTQIYMKDTRKGCLDLSKAGELGITSA 656
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D + ++ P+ EA+ RG A G+ EA +D S+A+E P A+ + RG+
Sbjct: 571 DEAIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRGM 630
Query: 492 VNFKFKDFNAAVEDLSACVKL 512
KD DLS +L
Sbjct: 631 TQIYMKDTRKGCLDLSKAGEL 651
>gi|431805486|ref|YP_007232387.1| TPR domain-containing protein [Liberibacter crescens BT-1]
gi|430799461|gb|AGA64132.1| TPR domain protein [Liberibacter crescens BT-1]
Length = 292
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R + N KY A++ +D LK P Y ALIGRG ++ A +DF +AI
Sbjct: 110 VNRALVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINL 169
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + G AW +G G+ AI+ SKA+ P+S + + RG+ KD A +
Sbjct: 170 NTTDGRAWHGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFD 229
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D + + LD +++ L G+YKK+ +++L A LD N+
Sbjct: 230 DFNTAINLDPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLDPNY 275
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS ++++ +P+ PE RG A A A+ DF A++ N EA+ R
Sbjct: 58 ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ + EA+ D AL+ P+ L RG + K + A D + + L+ + A+
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL L G++++A EA KAI L + E + Y L + E A + + +
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNTAINL 237
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIK 606
D ++++ + L+ G +KK+++
Sbjct: 238 DPNLAESWSNQALVYEMRGDYKKSLQ 263
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS +E I+SNP E + RG A A G +A+QD + A++ + R +V
Sbjct: 58 ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +N A+ D +K+ A G +G KA KAI L+ AW
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
Q E+A+E + + + + Y+ RG+ L + A D ++
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNT 233
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS+ + P + + RG+ + +F A++D + VKL+ AY
Sbjct: 54 SQENISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRA 113
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +I +Y +A + A+++ ++ A Y+ L + +KA + + ++
Sbjct: 114 LVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTD 173
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+H +GL+L GQH++AI+ S
Sbjct: 174 GRAWHGQGLILQLKGQHERAIEAFS 198
>gi|428298611|ref|YP_007136917.1| hypothetical protein Cal6303_1911 [Calothrix sp. PCC 6303]
gi|428235155|gb|AFZ00945.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 1338
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 43/279 (15%)
Query: 367 KFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + KS + D+ L+R + +G+Y AI+ FD++++ P EA GR
Sbjct: 428 KEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFDKVIEIHPEANEAWSGRSL 487
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A ++ AI + + + P E W RG A A + EA+ +A+E +P +
Sbjct: 488 ALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAIEIQPEQS 547
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH--- 540
I H+RG+ + + AV +K N + G AL G+Y++A ++
Sbjct: 548 IIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNA 607
Query: 541 ------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY--------------- 579
L A+ +DR ++A HL Q+Y+ + + KALE ++ LY
Sbjct: 608 LELNPSLHAVWIDRGVIQA--HLQQWYEAIVSWNKALE-IEPNLYLAWFNQAIAWEKLGE 664
Query: 580 -------------IDKRFSKAYHLRGLLLHGLGQHKKAI 605
I+ F A++ RG+LL G+ + AI
Sbjct: 665 TQEAIASYDCALNIEPNFHTAWYNRGVLLASQGELEAAI 703
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++Q++ ++ A+ F + LK P E RG A + + AI+ + A++ NP
Sbjct: 553 RGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNALELNP 612
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S W RG +A L + EAI +KALE EPN + I K + A+
Sbjct: 613 SLHAVWIDRGVIQAHLQQWYEAIVSWNKALEIEPNLYLAWFNQAIAWEKLGETQEAIASY 672
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ ++ +A+ G+ L+S GE + A ++ A+Q+ ++ EAW
Sbjct: 673 DCALNIEPNFHTAWYNRGVLLASQGELEAAILSYDYALQIQSDYWEAW 720
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ ++ +RG+A + G AI+ +++ + P Y +A + R A Q + AI+ F
Sbjct: 410 AYEYWFNRGLALFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFD 469
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ +P A EAW R A LG+ EAI + +P + + RG+ + + +
Sbjct: 470 KVIEIHPEANEAWSGRSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQY 529
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AV +++ E + GL+ QL HL +
Sbjct: 530 AEAVTSFDEAIEIQPEQSIIWHQRGLS------------------QL---------HLQR 562
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ E A+ Q+ L + ++LRG L GQ+++AI
Sbjct: 563 W-------EDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAI 601
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
KF D N A+ + + + + GLAL +G K+A ++ K+I + ++ +AW
Sbjct: 389 KFGDLNGAIASYDTAISITPDAYEYWFNRGLALFHLGYIKEAIASYEKSIVVKPDYYKAW 448
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + + A+ +V+ I ++A+ R L L LG+ +AI +R
Sbjct: 449 LNRAVILAEQGRYDDAIASFDKVIEIHPEANEAWSGRSLALLKLGKIPEAIYSYDQTTR- 507
Query: 615 MMPH 618
+ P+
Sbjct: 508 LQPY 511
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 373 ISKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+S +K++ ++ L ++ IA G+ AI+ +D L +P + A RG A
Sbjct: 636 VSWNKALEIEPNLYLAWFNQAIAWEKLGETQEAIASYDCALNIEPNFHTAWYNRGVLLAS 695
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
Q ELEAAI + A+Q EAW R A
Sbjct: 696 QGELEAAILSYDYALQIQSDYWEAWLARANTAA 728
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 5/263 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFC-----VTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
L+ D L E N A+ F ++ K + D GIA N+GK AI+
Sbjct: 22 LAQNIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIA 81
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
++ ++ +P Y E G A +Q +LE AI+ + AI+ NP+ E + G A +
Sbjct: 82 AYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQ 141
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI +KA+E PN A GI + A+ + ++++ Y+
Sbjct: 142 GKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSN 201
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG AL + G+ ++A A+ AI+++ N A+ +L + E+A+ + I+
Sbjct: 202 LGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINP 261
Query: 583 RFSKAYHLRGLLLHGLGQHKKAI 605
+ AY+ G+ L+ G+ ++AI
Sbjct: 262 NDAFAYNNLGVALYNQGKLEEAI 284
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +GK AI+ ++ ++ +P Y E G A + Q +LE AI+ + +AI+ NP+
Sbjct: 101 GVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPN 160
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI +KA+E PN A++ G + A+ +
Sbjct: 161 YAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYN 220
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ + AY LG+ALS+ G+ ++A A+ AI+++ N A+ +L +
Sbjct: 221 TAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGKL 280
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + I+ + AY G+ LH G+ ++AI
Sbjct: 281 EEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAI 318
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A N+GK AI+ +++ ++ +P Y A IG G A Q +LE AI+ + +AI+ NP+
Sbjct: 135 GFALSNQGKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPN 194
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + G A G+ EAI + A+E PN A + GI A+ +
Sbjct: 195 YAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYN 254
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ + AY LG+AL + G+ ++A A+ AI+++ N A+ L D
Sbjct: 255 TAIEINPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKL 314
Query: 568 EKALECLQQVLYI-DKRFSKA-----------YHL--RGLLLHGLGQHKKAIK 606
E+A+ + L + DK+ +A Y L +G L + +++KA+K
Sbjct: 315 EEAIAAYNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALK 367
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 52/266 (19%)
Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNE 394
+ + E S L F SN+ K + + +K+ I+ ++ + GIA N+
Sbjct: 124 NPNYAEVYSNLGFAL------SNQGKLEE--AIAAYNKAIEINPNYAFAYIGLGIALYNQ 175
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI+ +++ ++ +P Y E G A Q +LE AI+ + AI+ NP+ A+
Sbjct: 176 GKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNN 235
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A + G+ EAI + A+E PN A + G+ + A+ + ++++
Sbjct: 236 LGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINP 295
Query: 515 ENKSAY-----------------------------------------TYLGLALSSIGEY 533
+ AY T LG AL G+
Sbjct: 296 NDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLGYALQQQGKL 355
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
++A + KA+++D N A +L +
Sbjct: 356 EEAIAEYEKALKIDPNNTTAQNNLKE 381
>gi|428311655|ref|YP_007122632.1| hypothetical protein Mic7113_3500 [Microcoleus sp. PCC 7113]
gi|428253267|gb|AFZ19226.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 847
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ F + +K DP P A RG A E A++ F + ++ NP+ W+
Sbjct: 464 GRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRN 523
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG +A+ KA+E EP +A+ L RG + A+ ++LD
Sbjct: 524 RGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDP 583
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +A G+ S + Y +A KAI+LD N+ W + L ++AL
Sbjct: 584 TNANALINQGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSY 643
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +D + + RG LL LG + + ++
Sbjct: 644 DKAIELDPTDADGWFNRGWLLGELGSYDEGLE 675
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S SK+I +D +RGIA +Y A++ F++ L+ +P RG
Sbjct: 472 SFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATLGNL 531
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A+ + +AI+ P+ A RG A LG EA+ KA+E +P +A+ L
Sbjct: 532 GRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANALIN 591
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+V K + +N A+ ++LD + Y G L + Y +A ++ KAI+LD
Sbjct: 592 QGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELDP 651
Query: 549 NFLEAW-------GHLTQFYQDLANSEKALECLQQVLYI 580
+ W G L + + L + +KA+E +Q ++
Sbjct: 652 TDADGWFNRGWLLGELGSYDEGLESCDKAIELGEQSSFV 690
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N G+Y A+ +D+ ++ DP ALI +G + R A+ +AI+
Sbjct: 556 INRGAALGNLGRYEEALVSYDKAIELDPTNANALINQGVVFSKLRRYNEALVCADKAIEL 615
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ G W +G L EA+ KA+E +P AD RG + + ++ +E
Sbjct: 616 DPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELDPTDADGWFNRGWLLGELGSYDEGLE 675
Query: 505 DLSACVKLDKENKSAYTYLGLA 526
++L ++ S++ +L A
Sbjct: 676 SCDKAIELGEQ--SSFVFLNRA 695
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 34/190 (17%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-------NFKFKDFNAA 502
E W +G LG EA+ SKA++ +PN RGI FN
Sbjct: 451 EDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKG 510
Query: 503 VE---------------------------DLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E ++L+ N +A G AL ++G Y++
Sbjct: 511 LELNPNESITWRNRGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEE 570
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ KAI+LD A + + L +AL C + + +D + ++ +G +L
Sbjct: 571 ALVSYDKAIELDPTNANALINQGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVL 630
Query: 596 HGLGQHKKAI 605
L ++ +A+
Sbjct: 631 GQLERYDEAL 640
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 51 NWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
N+++A++I L+A I+D + +C L + + KA++LDP A+ +G
Sbjct: 432 NFAQALQIAQELVAIRGHIEDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRG 491
Query: 111 CAFSALGRKEEALSVWEKGYE 131
A L R EEAL+ + KG E
Sbjct: 492 IALRCLERYEEALASFNKGLE 512
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L H+ + DKA++L+P A I +G A LGR EEAL ++K E
Sbjct: 523 NRGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIE 580
>gi|425435038|ref|ZP_18815498.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389675288|emb|CCH95612.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 695
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG I + +FK + A++D + + D +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWP 635
+ + +D AY RG + L ++ AI D + N + L F
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQA---------LNFLEYSGLGFQ--- 413
Query: 636 FIRRR-----LLCTRLLKSTVSF-AGLTLMEILIP----SSRNIGAKDCIPRMYVKRFTD 685
RR L+ T++ +++ +F GL L +++I S+ N A+D + + ++
Sbjct: 414 -YRRHESGQGLIITKIFENSPAFKQGLILDDLIIAINGKSTLNKSAEDLVELTVNQMSSE 472
Query: 686 SLPCVILS-KRESSGD 700
S+ V L +R+ GD
Sbjct: 473 SVTQVTLKLRRKDRGD 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
NEA KRN K+ +R R A+ G++ AI +Q + +P A
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575
Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG + + + + A+ D+ +AI ++P A+ RG LG++ AI D ++ +
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGLIHRELGDNRGAINDHTQVIR 635
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P+ A+ + RG+ + A+ED +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLLLHG-LGQHKKAIKDLS 609
G + +++A+KD +
Sbjct: 579 GWIHSNRFKAYQEALKDYN 597
>gi|429122838|ref|ZP_19183371.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
gi|426281293|gb|EKV58292.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
Length = 800
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E +P + +ERG++N
Sbjct: 409 AIEDFDKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLIN 468
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
++ ++N+A+ED ++LD EN A +L L+ ++ EY+
Sbjct: 469 YRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDA 528
Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+A E K I +D N ++A+ ++ Y L +KA+EC +V+
Sbjct: 529 FYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIE 588
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
D AY+ RGL GL + +A +D
Sbjct: 589 TDNYSIDAYYNRGLSKVGLKLYNEAYED 616
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
I+ + VD +RG++ N Y AI FD++++ P A RG ++++
Sbjct: 73 EINNTHDTLVDAYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRY 132
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E I DF + ++ N EA G G+ EAI++ AL + D + RG
Sbjct: 133 EEGIKDFKKVLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAYYYRGH 192
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ D + V+L ++ +Y L +G Y+ A KAI+LD +F
Sbjct: 193 SKRYLNMYEEALSDFNKIVELRYDDSDSYYSKALTEFFLGLYEDAINDFNKAIELDNHFS 252
Query: 552 EAWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
A+ LT + Y+D + + +KALE D+ Y+ GLL + LG ++ A
Sbjct: 253 NAYYFRGLTKNSLELYKDAMDDYKKALEYAD-----DENIINIYNDMGLLEYKLGNYRDA 307
Query: 605 I 605
I
Sbjct: 308 I 308
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y AI+ + ++++ D +Y + R A + E A+ D+ +AI+ NP
Sbjct: 295 GLLEYKLGNYRDAINYYTKMIEINDDIYY-SYYNRALAEESLQLYEDALEDYNKAIELNP 353
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E + A + + R ++ + + A+ED
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDF 413
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + + Y Y GL S + E +A + KAI+LD ++ A+ +N
Sbjct: 414 DKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLINYRNSN 473
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIK 606
A+E + V+ +D A YHL L L +++ A+K
Sbjct: 474 YNSAIEDFKNVIELDNENVYANYHL-ALSYDALEEYETALK 513
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ +T+ I+ N ++ R A +L +A++D +KA+E P + RG++
Sbjct: 307 AINYYTKMIEINDDIYYSYYNRALAEESLQLYEDALEDYNKAIELNPEDTYSYNNRGLIK 366
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNF 550
+ + ++ A+ED + ++L+K++ Y L + YK+A E KAI + D F
Sbjct: 367 NEMQMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDFDKAISIYEGDSEF 426
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
G + + +L ++AL+ + + + +D ++ AY+ RGL+ + + AI+D +
Sbjct: 427 YYYRGLTSSYLNEL---DEALKYINKAIELDPKYINAYNERGLINYRNSNYNSAIEDFKN 483
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 114/229 (49%), Gaps = 12/229 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILK-----EDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
RG ++ Y A+S F++I++ D Y +AL F E AI+DF +A
Sbjct: 190 RGHSKRYLNMYEEALSDFNKIVELRYDDSDSYYSKAL-----TEFFLGLYEDAINDFNKA 244
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDF 499
I+ + A+ RG + +L +A+ D KALE+ + N +I ++ G++ +K ++
Sbjct: 245 IELDNHFSNAYYFRGLTKNSLELYKDAMDDYKKALEYADDENIINIYNDMGLLEYKLGNY 304
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + ++++ + +Y LA S+ Y+ A E + KAI+L+ ++ +
Sbjct: 305 RDAINYYTKMIEINDDIYYSYYNRALAEESLQLYEDALEDYNKAIELNPEDTYSYNNRGL 364
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ ++ALE + + ++K + Y+ R LL + +K+AI+D
Sbjct: 365 IKNEMQMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDF 413
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 20/267 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F +++ D A + E E A+ + I+ P
Sbjct: 464 RGLINYRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEP 523
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A + EAI+D K ++ + N D GI K++ A+E
Sbjct: 524 NTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECY 583
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ D + AY GL+ + Y +A E +++A++++ + A+ + +N
Sbjct: 584 TKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYNGIGFSKTKYSN 643
Query: 567 SE-------KALECLQQVLYIDKRFSKAYHLRGLLLH-GLGQHKKAIKDLSSGSRTMMPH 618
+E +A++ L+ L Y+ +GL L + +I D S T + +
Sbjct: 644 NEFKNGSIQRAIDLLRDAL--------LYYEKGLALKIDDNLNNASIYDSMGYSTTKLAN 695
Query: 619 LIWNLTRWRNLCFNAWPFIRRRLLCTR 645
+ ++ + NA+ + LLC R
Sbjct: 696 IYMSMKDYD----NAYKYYNDALLCFR 718
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
ISD E ++ + +A+ RG + L EAI+D K +E P ++ + RG
Sbjct: 69 ISD-EEINNTHDTLVDAYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKS 127
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ ++D ++ ++++ A Y+GL G+Y++A + A+ LD +A+
Sbjct: 128 YLGRYEEGIKDFKKVLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAY 187
Query: 555 ---GH---------------------------------LTQFYQDLANSEKALECLQQVL 578
GH LT+F+ L E A+ + +
Sbjct: 188 YYRGHSKRYLNMYEEALSDFNKIVELRYDDSDSYYSKALTEFF--LGLYEDAINDFNKAI 245
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+D FS AY+ RGL + L +K A+ D
Sbjct: 246 ELDNHFSNAYYFRGLTKNSLELYKDAMDD 274
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 331 SSISDNKS-----SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
S+I D K+ +++ + L+ +D L+E K R+ + + + D
Sbjct: 476 SAIEDFKNVIELDNENVYANYHLALSYDALEEYETALK-----YYARVIELEPNTPDAFY 530
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A++ Y AI F +++ D +A G + +E + AI +T+ I+++
Sbjct: 531 NRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIETD 590
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A+ RG ++ L EA +D +ALE P A+ + G K+
Sbjct: 591 NYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYNGIGFSKTKY 641
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LGR EE + ++K
Sbjct: 87 NRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYEEGIKDFKK 141
>gi|414077747|ref|YP_006997065.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
90]
gi|413971163|gb|AFW95252.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
90]
Length = 566
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+S +S + DF +RGI ++++ Y ++ F+Q +K DP Y EA RG + R+
Sbjct: 275 TRLSNPQS-ARDF-YARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRK 332
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A+ DF + I +P+ + + RG + +L + A++D ++A+ PN A +G
Sbjct: 333 YSEALVDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQG 392
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K ++ AA+E ++LD N Y+ +++ +Y+ A + AI +D +
Sbjct: 393 MAYLKLGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDN 452
Query: 551 LEAWGH------LTQFYQD-LANSEKALECLQQVLYIDKRFSKA 587
A+ + LT YQ LA+ +K+ E + Y+ K S+
Sbjct: 453 FSAYTNRAIARTLTNDYQGALADYQKSSEIFNR-RYVKKSTSQV 495
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P RG + Q + ++ DF +AI+ +P EA+ +RG L + EA+
Sbjct: 279 NPQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEALV 338
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ + +PN D RG ++ AA+ED + ++L+ + + G+A +
Sbjct: 339 DFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLKL 398
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G Y+ A E+ +AI+LD N + + L + + A++ + ID AY
Sbjct: 399 GNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDNFSAYTN 458
Query: 591 RGLLLHGLGQHKKAIKDLSSGS 612
R + ++ A+ D S
Sbjct: 459 RAIARTLTNDYQGALADYQKSS 480
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
SNP + + RG + E+++D ++A++ +P ++ +RG V + ++ A+
Sbjct: 278 SNPQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEAL 337
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + + +D Y G S+ + A E +A++L+ N+ H Y
Sbjct: 338 VDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLK 397
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L N E ALE +Q + +D S Y ++ + + L ++ AIK
Sbjct: 398 LGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIK 440
>gi|298492639|ref|YP_003722816.1| hypothetical protein Aazo_4355 ['Nostoc azollae' 0708]
gi|298234557|gb|ADI65693.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 1192
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G A++ ++Q K +P E + + E AI+ + +AI P
Sbjct: 309 QGLQQAKSGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQAIALKP 368
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG G+ AI KA+E +PN + RG+ K A+
Sbjct: 369 DFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSY 428
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L ++++ + Y G+AL+ +Y+ A ++ +AI++ ++ E W +L
Sbjct: 429 DQALELQRQDQETWYYRGVALAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKR 488
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+E Q L I F A++ RG+ L L + ++AI
Sbjct: 489 WSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAI 527
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG V G + AI+ FD+ ++ P Y EA RG A + AIS + +A++
Sbjct: 376 NRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQ 435
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
E W RG A A+GE E AI ++A+E +P+ ++ +RG+V F K ++ A+E
Sbjct: 436 RQDQETWYYRGVA-LAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKRWSEAIE 494
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + + A+ G+AL ++ ++A ++ KAI + +F AW + + L
Sbjct: 495 SWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQAVAFYYL 554
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A+ C L I + +A+ RG
Sbjct: 555 NRFAEAISCYDSALEIKLDYWEAWLGRG 582
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+K + S ++ ++ + + ++ AI+ +DQ + P + +A RG + +
Sbjct: 330 TKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDG 389
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ F +AI+ P+ EAW RG A LG EAI +ALE + + + RG+
Sbjct: 390 AITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQRQDQETWYYRGVAL 449
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ + +++ + + G+ L ++ + +A E+ +A+ + +F A
Sbjct: 450 AVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKRWSEAIESWDQALSIQPDFYLA 509
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W + ++LA E+A+ Q+ + I F A++ + + + L + +AI
Sbjct: 510 WYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQAVAFYYLNRFAEAI 561
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A +G +A +L A++ + +A + P + E W + L EAI +A
Sbjct: 304 QAWFYQGLQQAKSGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQA 363
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P+ + RG + +F DF+ A+ ++L + A++ GLAL +G +
Sbjct: 364 IALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWE 423
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A ++ +A++L R E W +Y+ +A E A+ Q + I + + +
Sbjct: 424 AISSYDQALELQRQDQETW-----YYRGVALAVGEQYEDAIASYNQAIEIQPDYHEVWID 478
Query: 591 RGLLLHGLGQHKKAIK 606
RG++L L + +AI+
Sbjct: 479 RGVVLFNLKRWSEAIE 494
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I D+ + RG+ N +++ AI +DQ L P + A RG A
Sbjct: 458 AIASYNQAIEIQPDYHEVWIDRGVVLFNLKRWSEAIESWDQALSIQPDFYLAWYNRGIAL 517
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + +AI P AW + A L EAI ALE + + +
Sbjct: 518 ENLARREEAITSYQKAITIKPDFHPAWYNQAVAFYYLNRFAEAISCYDSALEIKLDYWEA 577
Query: 486 LHERG-----IVNFKF 496
RG +VN KF
Sbjct: 578 WLGRGGAVGNLVNDKF 593
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
AI+D +AL P N A +G+ K D A+ + KL+ E+ +
Sbjct: 281 AIRDERQALIQRPSFQITVTNQAQAWFYQGLQQAKSGDLLGALAFYNQATKLEPESAEYW 340
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
L L + +++A A+ +AI L +F +AW + + + + A+ + + +
Sbjct: 341 FNQALTLFHLKRFEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIEL 400
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +A+ RGL L LG +AI
Sbjct: 401 QPNYQEAWSSRGLALLKLGLIWEAI 425
>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 285
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG+A G++ AI+ F Q ++ DP A R A R R +A + DF AI
Sbjct: 78 TRGVAHAKVGQFQEAIADFSQAIQSDPNSAAAFTNRALAFRQIGRSDQARL-DFDRAITV 136
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ R A G EA+ DL A+ P SA H RG+++ K D AV
Sbjct: 137 SPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVT 196
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + D + Y G +L ++G+Y KA E A+ +D AW L Y
Sbjct: 197 DFDNAIDRDPFAAAPYQARGESLVALGKYDKAIEDFNAALNVDNKSAPAWAWLGLAYDRQ 256
Query: 565 ANSEKALECLQQVLYIDK 582
N KA E Q+ L ID
Sbjct: 257 GNRAKAAESYQRALSIDP 274
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
FD+ + P + A IGR Q L+ A+ D AI+ NP + +A+ RG G
Sbjct: 130 FDRAITVSPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLNPESAQAFHARGLIHQKRG 189
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+++ A+ D A++ +P +A RG ++ A+ED +A + +D ++ A+ +L
Sbjct: 190 DNLRAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAIEDFNAALNVDNKSAPAWAWL 249
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRN 549
GLA G KA E++ +A+ +D N
Sbjct: 250 GLAYDRQGNRAKAAESYQRALSIDPN 275
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 455 RGQARAALGESVEA---IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
RG A +G+ A I+ LS+ + P SA+ + RG+ + K F A+ D S ++
Sbjct: 43 RGFAETEVGDPKAASANIESLSEVIRRNP-SAEAFNTRGVAHAKVGQFQEAIADFSQAIQ 101
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
D + +A+T LA IG +A +AI + N A+ + N ++AL
Sbjct: 102 SDPNSAAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEAL 161
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L + ++ ++A+H RGL+ G + +A+ D
Sbjct: 162 IDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVTDF 198
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA--YTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG + D AA ++ + ++ + N SA + G+A + +G++++A +AIQ
Sbjct: 43 RGFAETEVGDPKAASANIESLSEVIRRNPSAEAFNTRGVAHAKVGQFQEAIADFSQAIQS 102
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N A+ + ++ + S++A + + + + AY R LL G +A+
Sbjct: 103 DPNSAAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEALI 162
Query: 607 DLSSGSR 613
DL + R
Sbjct: 163 DLDAAIR 169
>gi|428320334|ref|YP_007118216.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244014|gb|AFZ09800.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 560
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ FD+ ++ + YPEA IGRG + R+ E AI+ F +AIQ NP+ EAW RG A
Sbjct: 284 AAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIA 343
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--- 515
A L EAI S AL+ E N + + RG K + + A+ + L E
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
G AL + +Y++A A+ + I++ + EAW L E+AL
Sbjct: 404 TSKVGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + I + + RGL+L + + +A+
Sbjct: 464 RAITIWPDNYQGWVQRGLILGEMQNYSQAL 493
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S + + RG + AI+ FDQ ++ +P +PEA +GRG A A
Sbjct: 288 CFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIALAGL 347
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
+ AI ++ A+Q + EAW RG+A L + EAI K + ++ +
Sbjct: 348 ERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKV 407
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++G K + + AV + +K+ +N A+ G ALS + +Y++A ++ +AI
Sbjct: 408 GLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAIT 467
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + W ++ N +AL +V+ + +A+ RG +L L + + AI
Sbjct: 468 IWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAI 527
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA KYA A++ +D++L+ P EA +G A Q +AAI+ F AIQ
Sbjct: 237 FNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA-DAAIACFDRAIQI 295
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW RGQ LS++ +FE A+
Sbjct: 296 NSFYPEAWIGRGQT-------------LSESRDFE---------------------GAIA 321
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ A+ G+AL+ + YK+A A+ A+Q++ NFLEAW + + L
Sbjct: 322 AFDQAIQINPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKL 381
Query: 565 ANSEKALECLQQVLYIDKR---FSKAYHLRGLLLHGLGQHKKAI 605
E+A+ C +V+ + SK +G L L Q+++A+
Sbjct: 382 QQYEEAIACFDKVISLTSEAEITSKVGLQQGAALEKLQQYEQAV 425
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 34/271 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ ++ AI+ FD ++ + EA RG ++ +AA + + A Q +P
Sbjct: 103 RGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAATCYKRATQLHP 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W R+G EA+ +AL+ P + + RG+ K + + AV
Sbjct: 163 NLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSY 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---------- 556
++L +N A+ G+A + + +Y +A A+ + +Q+ N EAW +
Sbjct: 223 DRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA 282
Query: 557 ------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLRGL 593
+ FY Q L+ S E A+ Q + I+ F +A+ RG+
Sbjct: 283 DAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGI 342
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHL-IWNL 623
L GL ++K+AI S+ + L WNL
Sbjct: 343 ALAGLERYKEAIIAYSNALQIEGNFLEAWNL 373
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
RG A +Y AI+ FD+++ E + + + +G A ++ E A++ + I+
Sbjct: 374 RGEALEKLQQYEEAIACFDKVISLTSEAEITSKVGLQQGAALEKLQQYEQAVAAYNRVIK 433
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW +RG A + L + +A+ +A+ P++ +RG++ + ++++ A+
Sbjct: 434 IVPDNFEAWLKRGNALSKLQQYEQALASYDRAITIWPDNYQGWVQRGLILGEMQNYSQAL 493
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L +N A+ G L + + A ++ A+++ ++ EA
Sbjct: 494 VAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEA 543
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 68/150 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V ++ I+ L +G A +Y A++ +++++K P EA + RG A + +
Sbjct: 394 VISLTSEAEITSKVGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQ 453
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A++ + AI P + W +RG + +A+ + ++ +P++ + +R
Sbjct: 454 QYEQALASYDRAITIWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQR 513
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G V K + A+ +++ + A
Sbjct: 514 GDVLQKLQRTQDAISSYGVALEIKPDYYEA 543
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ K + + L RG A +Y A++ +D+ + P + + RG +
Sbjct: 430 RVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITIWPDNYQGWVQRGLILGEMQNY 489
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A+ F IQ P EAW +RG L + +AI ALE +P+ + L R
Sbjct: 490 SQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSR 547
>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Moorea producens 3L]
gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Moorea producens 3L]
Length = 726
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 380 SVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+V+ R A +GK Y A++ +DQ ++ +P Y A GRG +
Sbjct: 372 AVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQAIQIEPDYSAAWKGRGKTLEQLERYD 431
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AAI F A++ P+ +AW G + +AI KAL+ +P+S + RG
Sbjct: 432 AAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWA 491
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + AAVE + + A+ G LS++ +YK A +++ +A+Q NF +
Sbjct: 492 LHNLRRYKAAVESYDRALDYKPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQ 551
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AW L ++AL Q + + + +A++ RG LH + +++ A++
Sbjct: 552 AWYSWGNTLNQLGKYQEALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALE 605
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +S G QV Y AI+ FD+ LK P +A RG A R +AA+ +
Sbjct: 448 LDAWISLGNVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDR 507
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ P++ EAW +RG + L + +A + +A++F+PN + G + +
Sbjct: 508 ALDYKPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQ 567
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ VKL ++ A+ G L + Y+ A EA+ KAI+L +AW
Sbjct: 568 EALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNT 627
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L + A+ QQ + +S+A++ G L ++KKAI
Sbjct: 628 FYKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAI 672
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ +++ ++ Y A G+G + E A++ + +AIQ P AWK R
Sbjct: 361 RYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQAIQIEPDYSAAWKGR 420
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L AI+ + ALE +PN D G V K K++ A+ +KL +
Sbjct: 421 GKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAIASFDKALKLKPD 480
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK---ALE 572
+ A+ G AL ++ YK A E++ +A+ N EAW Q DL+N K A +
Sbjct: 481 SYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNSAEAW---YQRGNDLSNLRKYKDAAK 537
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
QQ + F +A++ G L+ LG++++A+
Sbjct: 538 SYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEAL 570
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +AI F+ L+ P +A I G + + AI+ F +A++ P + +AW RR
Sbjct: 429 RYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAIASFDKALKLKPDSYQAWYRR 488
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L A++ +AL+++PNSA+ ++RG + + A + V+
Sbjct: 489 GWALHNLRRYKAAVESYDRALDYKPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPN 548
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G L+ +G+Y++A + +A++L +AW + E ALE
Sbjct: 549 FYQAWYSWGNTLNQLGKYQEALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYY 608
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + + +A++ RG + L ++K AI
Sbjct: 609 KAIKLKSKPYQAWYSRGNTFYKLERYKDAI 638
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + RG N KY A + Q ++ P + +A G + + A+
Sbjct: 512 KPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALG 571
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F +A++ P + +AW RG + +A++ KA++ + + RG +K
Sbjct: 572 SFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTFYKL 631
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ V + A+ LG AL +YKKA A+ KA++ N+ EA
Sbjct: 632 ERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQPNYREA 688
>gi|189184574|ref|YP_001938359.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
Ikeda]
gi|189181345|dbj|BAG41125.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
Ikeda]
Length = 357
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 127/242 (52%), Gaps = 2/242 (0%)
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
KKF + K S + +++GIA G++ AI +D +K P EA I +G +
Sbjct: 24 KKFNLA--IKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINKGISL 81
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI ++ AI+ P + EA+ +G A LG+ EAI++ A++++P+SA+
Sbjct: 82 KQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEA 141
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G + + A+E+ ++ + + +AY G+AL+ +G Y++A + + AI+
Sbjct: 142 YINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIK 201
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +A+ + +L ++A+E + + KAY+ +G+ L+ L Q+++AI
Sbjct: 202 YKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAI 261
Query: 606 KD 607
++
Sbjct: 262 EN 263
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K SV+ +++GI+ G+Y AI +D +K P EA I +G A + + A
Sbjct: 65 KYKPDSVEAYINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEA 124
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I ++ AI+ P + EA+ +G L + EAI++ A+ PN + + +GI
Sbjct: 125 IENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALN 184
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A+++ +K + AY G AL+ +G Y++A E I+ + N +A+
Sbjct: 185 ELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAY 244
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ L ++A+E + ++AY +G+ L LGQH++AIK +
Sbjct: 245 YNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQHQEAIKKFN 299
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 113/218 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI F+ +K +P EA I +G A + + AI ++ AI+ P + EA+ +
Sbjct: 18 KYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINK 77
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + LG+ +AI++ A++++P+SA+ +G + + A+E+ +K +
Sbjct: 78 GISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPD 137
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ AY G L + +Y++A E + AI+ + N + A+ + +L ++A++
Sbjct: 138 SAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYD 197
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +KAY +G L+ LG++++AI++ +G R
Sbjct: 198 IAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIR 235
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K S + +++G A G+Y AI +D +K P EA I +G + + A
Sbjct: 99 KYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEA 158
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I ++ AI+ NP+ A+ +G A LG EAI + A++++P+ A +G
Sbjct: 159 IENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALN 218
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A+E+ ++ + ++ AY G++L + +Y++A E AI+ + EA+
Sbjct: 219 ELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAY 278
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ L ++A++ + F++AY +G L LGQ +KAIK+ +
Sbjct: 279 MNKGVALSKLGQHQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAIKNFELAIK- 337
Query: 615 MMPHLIWNLTR 625
P LI R
Sbjct: 338 YKPGLIAPYIR 348
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 427 FQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
FQ R+ + AI F AI+ NP + EA+ +G A LG+ EAI++ A++++P+S +
Sbjct: 14 FQLRKYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEA 73
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GI + + A+++ +K ++ AY G AL+ +G+Y++A E + AI+
Sbjct: 74 YINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIK 133
Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ EA+ L Q+ + + N + A+ C + AY+ +G+ L+ L
Sbjct: 134 YKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRC-------NPNDVNAYYNKGIALNEL 186
Query: 599 GQHKKAI 605
G++++AI
Sbjct: 187 GRYQEAI 193
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 13 LNKTHKTICEIDELVRVDSVMAS---AITARIELAK--------LCSLRNWSKAIRILDS 61
+N + ++EL R + + AI + +LAK L L + +AI D+
Sbjct: 173 VNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDT 232
Query: 62 LLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGR 118
+ Y D N+ QL ++ I +CD A++ P L +AY+ KG A S LG+
Sbjct: 233 GI--RYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQ 290
Query: 119 KEEALS------VWEKGYEHA-LHQSADLKQFLELEELL 150
+EA+ ++ G+ A L++ LKQ + E+ +
Sbjct: 291 HQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAI 329
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASA-ITARIELAKLC----SLRNWSKAIRI-LDS 61
+S ++L K + I + + ++ + A A I I L KL ++ N+ AI+ DS
Sbjct: 11 NSFFQLRKYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDS 70
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
+ A N+ QL ++ I++ D A++ P +AYI KG A + LG+ +E
Sbjct: 71 VEA-------YINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQE 123
Query: 122 ALSVWE 127
A+ ++
Sbjct: 124 AIENYD 129
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L + +AI D ++ ++ N+ ++L ++ I + D A++ P L +
Sbjct: 149 LMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAK 208
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
AYI KG A + LGR +EA+ ++ G
Sbjct: 209 AYINKGNALNELGRYQEAIENFDTG 233
>gi|17232418|ref|NP_488966.1| hypothetical protein all4926 [Nostoc sp. PCC 7120]
gi|17134064|dbj|BAB76625.1| all4926 [Nostoc sp. PCC 7120]
Length = 1273
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q +G AI+ ++Q ++ +P E RG AI+ + +AI+ P
Sbjct: 380 QGLQQAKQGDLLGAIANYEQAIQLNPSSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 439
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EA+ L +A+ +P+ +G K A+
Sbjct: 440 DYYKAWYNRGGTLGQLGLYEEAVASLKQAISIQPDMPGAWSSKGWAELKLGQIGEAIASY 499
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL +Y+ A +++ KA+++ +F E W +L
Sbjct: 500 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQ 559
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ Q L I F A++ RG+ L LG+ +AI
Sbjct: 560 WSEAIASWDQALSIQADFYLAWYNRGVALENLGRRAEAI 598
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S ++ +RG+ + ++ AI+ +DQ ++ P Y +A RG E A++
Sbjct: 407 SYEYWFNRGLTLFHLERFVEAIASYDQAIEIKPDYYKAWYNRGGTLGQLGLYEEAVASLK 466
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI P AW +G A LG+ EAI +AL P + + RGI + +
Sbjct: 467 QAISIQPDMPGAWSSKGWAELKLGQIGEAIASYDEALLLSPEDQENWYYRGIALGVDEQY 526
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA++ +++ + + G+ L ++G++ +A + +A+ + +F AW +
Sbjct: 527 EAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQWSEAIASWDQALSIQADFYLAWYNRGV 586
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++L +A+ +Q + I F A++ + + L L + +AI
Sbjct: 587 ALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVALFYLERFLEAI 632
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + +Y +AI +D+ L+ P + E I RG + AI+ + +A+
Sbjct: 516 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQWSEAIASWDQALSIQA 575
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG EAI +A+E +P+ + + + F + F A+
Sbjct: 576 DFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVALFYLERFLEAIVCY 635
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
+++ + A+ G A+ ++ E
Sbjct: 636 DNALQIKLDYWEAWIGRGTAIGNLNE 661
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ SI DF L+ RG+A N G+ A AI+ + Q ++ P + A + A
Sbjct: 563 AIASWDQALSIQADFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVAL 622
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ AI + A+Q EAW RG A L E+
Sbjct: 623 FYLERFLEAIVCYDNALQIKLDYWEAWIGRGTAIGNLNET 662
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++ IA+ N G + A+ ++ L +P E L G + + A+ F
Sbjct: 106 VDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRM 165
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ P EAW G ++GE +A+ L +P + + +GIV+ + ++F
Sbjct: 166 AVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFE 225
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + L + S++ G A G+YK+A A+ KA+++D + + +L Q
Sbjct: 226 KAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQT 285
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+++ + A++C + + +D + +AY RG G+ + A++D +
Sbjct: 286 YEEMGSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFN 334
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A GKY A++ + + LK DP G + AI +TEAI +P
Sbjct: 249 GYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLDPD 308
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A G+ A++D +KA+ D + + + + N ++E
Sbjct: 309 YYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESYK 368
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V++D +N + + L A +G + ++ +A+ + I++D+N+ A+ + + L+++
Sbjct: 369 NAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSHT 428
Query: 568 EKALECLQQVLYID 581
++ +E L++ +D
Sbjct: 429 QEGIEYLKKAFELD 442
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+ NP+ + A LG EA++ L KAL EP++ +IL+ G + K +
Sbjct: 95 FRKALSLNPNDVDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKE 154
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+N AVE V+ + A+ LG S+GE K A A+ + D W +
Sbjct: 155 KYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNK 214
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L EKA+ + + + FS ++ G + G++K+A+
Sbjct: 215 GIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAM 262
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A+AI + + + DP Y EA + RG + + A+ DF +AI +AW
Sbjct: 290 GSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYA 349
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ +LG+ E+I+ A+E +P++ + + F+ ++ +++ C+++DK
Sbjct: 350 KADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDK 409
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
AY + + ++ E KA +LD N
Sbjct: 410 NYARAYYSIAKINFLLSHTQEGIEYLKKAFELDPN 444
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q P E W +G + EA KAL PN D I F
Sbjct: 65 LQITPYNYEIWHFKGIFLNNMFRFAEAYNCFRKALSLNPNDVDTHINIAIAEDNLGMFEE 124
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AVE L + ++ N+ LG +Y +A E A++ ++LEAW L Y
Sbjct: 125 AVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCY 184
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + AL + L D ++ +G++ L + +KAI
Sbjct: 185 ESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFEKAI 228
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 41/253 (16%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ ++ L DP +G E E AI+ F +I +W
Sbjct: 188 GELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSSWFN 247
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A G+ +A+ KAL+ +P+ I + G + A++ + + LD
Sbjct: 248 CGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLDP 307
Query: 515 ENKSAYTYLG----------LAL------------------------SSIGEYKKAEEAH 540
+ AY G LAL S+G+ ++ E++
Sbjct: 308 DYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESY 367
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH----LRGLLLH 596
A+++D + W L + + ++ N ++L+ ++ + IDK +++AY+ + LL H
Sbjct: 368 KNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSH 427
Query: 597 ---GLGQHKKAIK 606
G+ KKA +
Sbjct: 428 TQEGIEYLKKAFE 440
>gi|434392514|ref|YP_007127461.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428264355|gb|AFZ30301.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 291
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 101/192 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + AI+ ++Q + +P RG A EAAI+D+ AI N
Sbjct: 76 NRGNARDDLGDHQGAIADYNQAININPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG R ALG+ + A+ D ++A++ EPN + RG + D A+ D
Sbjct: 136 PKFASAYNSRGILRFALGDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ AY G+A + GE++ A +A+Q++ N+ EA+ + Y +
Sbjct: 196 YTQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIG 255
Query: 566 NSEKALECLQQV 577
N+++AL+ QQ
Sbjct: 256 NNQQALQDFQQA 267
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ Q ++G AI+ F ++++ DP A RG AR + + AI+D+ +AI N
Sbjct: 42 NQGVKQYSDGDIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAININ 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG A LG + AI D ++A+ F P A + RGI+ F D A+ D
Sbjct: 102 PNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMAD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ Y G A G+ + A + + +QL+ +A+ + +
Sbjct: 162 FNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDADAYFNRGIARYNEG 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ A+ Q L I+ +++AY+ R L +G +++A++D +
Sbjct: 222 EHQSAIADFNQALQINPNYAEAYYNRALCYSAIGNNQQALQDFQQAA 268
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQS 444
+RGIA G +AI+ +++ + +P + A RG R A EL A ++DF +AIQ
Sbjct: 110 NRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNA-MADFNQAIQL 168
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ + RG AR G++ AI D ++ L+ P AD RGI + + +A+
Sbjct: 169 EPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDADAYFNRGIARYNEGEHQSAIA 228
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++++ AY L S+IG ++A L+ Q N E ++YQD
Sbjct: 229 DFNQALQINPNYAEAYYNRALCYSAIGNNQQA----LQDFQQAANLYEQQ-QKPEYYQD 282
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + D A+ + ++LD N +AY G A +G+++ A + +AI +
Sbjct: 41 YNQGVKQYSDGDIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAINI 100
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N + + Y L N+E A+ + + + +F+ AY+ RG+L LG A+
Sbjct: 101 NPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMA 160
Query: 607 DLS 609
D +
Sbjct: 161 DFN 163
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + D +RGIA+ NEG++ SAI+ F+Q L+ +P Y EA R +
Sbjct: 197 TQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGN 256
Query: 431 LEAAISDFTEA 441
+ A+ DF +A
Sbjct: 257 NQQALQDFQQA 267
>gi|91772293|ref|YP_564985.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
gi|91711308|gb|ABE51235.1| Transmembrane and tetraticopeptide repeat-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++EG +A A++ F+ + P P A G+G + + + EAAI + A+Q +P+ A
Sbjct: 2 LDEGDHAGALNAFETAIMYQPNVPAAWYGKGDSHFYLGDYEAAIQAYDMALQYDPNLLNA 61
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ + + A +G+S EA KA + A+I +G + ++ +V +
Sbjct: 62 YAGKADSLAKIGKSDEARTLYEKATAIGADDAEIWSRKGSTLYGLGYYSESVNAYDKAIS 121
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD N +Y G +L I +Y A EA +A+ D + +W Y L E A+
Sbjct: 122 LDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGYEAAI 181
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L ID FS A+ +G L+ +G H+ AI
Sbjct: 182 SAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAI 215
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G + G + AI FD L P Y +AL G+ E + ++ F E I ++
Sbjct: 200 GKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAFTLFALEEYDLSLIAFNETIDAD 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S +AW +G + +G++ +A +++ AD L+ G F+ F+ A+E
Sbjct: 260 ASYAKAWSGKGDVLSQIGKAEQATASYRMSVQLYSGDADALYNLGRELFEMGLFSEALEA 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A + ++ EN A G AL +G+YK A A +AI + +
Sbjct: 320 FEASLNVNSENLFALVGKGYALYELGDYKGASVAFDQAIAVQPGY 364
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+IS+D + +G + + +Y+ A+ F++ L D Y + +G+G
Sbjct: 118 KAISLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGY 177
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAIS + A+ +P+ AW +G + +G+ AI AL P L +
Sbjct: 178 EAAISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAF 237
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F ++++ ++ + + D A++ G LS IG+ ++A ++ ++QL
Sbjct: 238 TLFALEEYDLSLIAFNETIDADASYAKAWSGKGDVLSQIGKAEQATASYRMSVQLYSGDA 297
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+A +L + ++ +ALE + L ++ A +G L+ LG +K A
Sbjct: 298 DALYNLGRELFEMGLFSEALEAFEASLNVNSENLFALVGKGYALYELGDYKGA 350
>gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 456
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D LS+GIA +G Y AI+ +Q L+ +P +A RG + Q + AI DF E
Sbjct: 24 ADTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHYCQGDALGAIGDFDE 83
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ +P +A+ RG A L + A+QD ++AL+ + N A R ++ +D++
Sbjct: 84 VLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSNYAKGYLNRSMLRLALEDYD 143
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D ++++ Y G+A + Y+ A +A+ ++ N A+ +
Sbjct: 144 GAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMN 203
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ L ++A+ VL ++ ++AY RG + LG++ +I+D R
Sbjct: 204 HIALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGENWSSIEDFDQAMR 256
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+R + ++ Y AI+ DQ+++ +P E + RG AR + AI D A+
Sbjct: 130 LNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAI 189
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG ALG EAI D + LE PN A RG V + + +++E
Sbjct: 190 NSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGENWSSIE 249
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L+ A+ + +A + E E+ K IQ L G+L YQ L
Sbjct: 250 DFDQAMRLEPVAAKAF-FQQIANTLNQEPDTVEDDESKLIQ----GLMVRGNLR--YQ-L 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ AL QVL +D +++AY+ R + +G ++ AI DL
Sbjct: 302 GDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADL 345
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+S E +QS+ + W +G A G+ AI L++AL+ P+ A H RG+ ++
Sbjct: 13 LSAGMEDVQSD---ADTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHY 69
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D A+ D ++LD +N AY+ GL L+++ + A + + +A+QLD N+ + +
Sbjct: 70 CQGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSNYAKGY 129
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + L + + A+ QV+ ++ ++ Y RG+ + ++ AI D
Sbjct: 130 LNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGD 182
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 41/193 (21%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEA--------------------------L 418
L+RG ++ G+ S+I FDQ ++ +P+ +A L
Sbjct: 232 LNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPDTVEDDESKLIQGL 291
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL------ 472
+ RG R + AA++ + + ++ +P+ EA+ +R R+A+G+ AI DL
Sbjct: 292 MVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADLDMVKTL 351
Query: 473 SKALEFEPNSADI---------LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
S A P + H+ G+ DF+ A+E + ++ ++ N +A T
Sbjct: 352 SLATPLSPEPVSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVLQENQNNATALTCR 411
Query: 524 GLALSSIGEYKKA 536
G A +G+ +A
Sbjct: 412 GFAYRRLGDKPRA 424
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF------ 438
+ RG + G Y +A++ ++Q+L+ DP Y EA R T R+ + + AI+D
Sbjct: 292 MVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADLDMVKTL 351
Query: 439 ---------TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
++ ++ + + + G + G+ AI+ + L+ N+A L R
Sbjct: 352 SLATPLSPEPVSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVLQENQNNATALTCR 411
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
G + D A+ D K+
Sbjct: 412 GFAYRRLGDKPRAIADFQTAAKV 434
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
LN + + ++ +++DS A R L +L ++ AI D ++ + + +
Sbjct: 105 LNDRWGAMQDYNQALQLDSNYAKGYLNRSMLR--LALEDYDGAIADCDQVIRMNPNLAEG 162
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR ++E ++ I DCD+AL ++ L AY +G ALG +EA++
Sbjct: 163 YLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIA 215
>gi|398019700|ref|XP_003863014.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501245|emb|CBZ36324.1| hypothetical protein, conserved [Leishmania donovani]
Length = 847
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 18/292 (6%)
Query: 355 LKETSNEAKRNKKFC------VTRISKSKSISVDF-------RLSRGIAQVNEGKYASAI 401
L T +A N+ FC TR + + ++D + GI+ ++G++A A+
Sbjct: 438 LSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGRHARAM 497
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
F + ++ D +P+ RG + Q AAI+D+T AI +P ++ R +
Sbjct: 498 QAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSK 557
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ D + AL+ + +A+ H RG K AAVE+ + ++L + A
Sbjct: 558 LGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALN 617
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQF-YQDLANSEKALECLQQVLY 579
GL + +Y KA +AI+LD RN W H + Y+++ E A+ +
Sbjct: 618 ARGLVYDQLQQYDKALADFTEAIRLDQRN--PVWLHNRGYTYRNMGELELAIADYSASIK 675
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ AY R LG+++ AI+D + R P + + R CF
Sbjct: 676 LAPHSHTAYTNRAFAFRKLGRYEAAIEDYTRALRE-HPGVATKVLNNRAYCF 726
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + ELEAAI +T A++ +P+ +A R L AI+D + AL+ +P
Sbjct: 415 RGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALDLDP 474
Query: 481 NS----------------------------------ADILHERGIVNFKFKDFNAAVEDL 506
+ D H RG K + AA+ D
Sbjct: 475 RNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADY 534
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + LD ++ ++ S +G Y++A + A+Q+D A+ + L
Sbjct: 535 TTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGR 594
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR- 625
E A+E L + + + A + RGL+ L Q+ KA+ D + R + +W R
Sbjct: 595 LEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNPVWLHNRG 654
Query: 626 --WRNL 629
+RN+
Sbjct: 655 YTYRNM 660
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +RG GE AI ++ALE P L R K K++ A+ED +A +
Sbjct: 412 FYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALD 471
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFLE----AWG--- 555
LD N + LG++ G + +A +A +AI+LD R F + A+
Sbjct: 472 LDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAI 531
Query: 556 ------------HLTQFYQ------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
H Y L E+A+ L ID + AYH RG L
Sbjct: 532 ADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAK 591
Query: 598 LGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFN 632
LG+ + A+++ + R + P L + L R L ++
Sbjct: 592 LGRLEAAVENFNCALR-LSPKLTFALN-ARGLVYD 624
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T A++
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTRALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +A++D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEVPSTACSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 37 ITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKAL 96
T R + A ++ +++ AI + Y NRA+C+S+L ++ + D AL
Sbjct: 519 FTQRKQGAYAAAIADYTTAISLDPKHFKSHY------NRAYCFSKLGRYEEAVADYAAAL 572
Query: 97 QLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+D AY +G A + LGR E A+
Sbjct: 573 QIDSGNANAYHNRGAALAKLGRLEAAV 599
>gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102]
gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 280
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 1/210 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+R S + S +F L +G Q G +AI+ + + + ++ Y A GRG A +
Sbjct: 50 SRRSATASRGGEFYL-QGKNQHLNGDLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGD 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI+D+ +A++ NP+ EA+ G ARA+L + EA++D S+A+ PN A+ + RG
Sbjct: 109 KEKAIADYNQALRINPNDAEAYNNLGNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A++DL ++L+ AY G A ++ G+ K A + +AI+L+ NF
Sbjct: 169 NARAANGDRKGAIDDLGQAIRLNPRYAIAYNNRGNARAANGDPKGAIADYNQAIRLNPNF 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A+ + + + AL+ L++ I
Sbjct: 229 APAYNNRGNARATNGDRQGALKDLEKAASI 258
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L+AAI+ +++AI N G A+ RG A LG+ +AI D ++AL PN A+ +
Sbjct: 74 DLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNNL 133
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + AV+D S ++L+ AY G A ++ G+ K A + +AI+L+
Sbjct: 134 GNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNPR 193
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL- 608
+ A+ + + + A+ Q + ++ F+ AY+ RG G + A+KDL
Sbjct: 194 YAIAYNNRGNARAANGDPKGAIADYNQAIRLNPNFAPAYNNRGNARATNGDRQGALKDLE 253
Query: 609 -------SSGSRTMMPHLIWNLTRWR 627
S G+ + ++ N+ R
Sbjct: 254 KAASIFQSQGNNDLYQQVMKNIKELR 279
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI SKA+ + RG+ F D A+ D + ++++ + AY
Sbjct: 73 GDLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNN 132
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG A +S+ ++A + + +AI+L+ N+ EA+ + + + A++ L Q + ++
Sbjct: 133 LGNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNP 192
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
R++ AY+ RG G K AI D + R + P+
Sbjct: 193 RYAIAYNNRGNARAANGDPKGAIADYNQAIR-LNPNF 228
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 37/259 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+A N K AI +D +K DP Y +AL +GT E + AI F +A++
Sbjct: 62 FYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKI 121
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-------------- 490
+P E +G A LG EAI+ +KA+ +EP + L+ +G
Sbjct: 122 DPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLKRYEEAIE 181
Query: 491 ----IVNFKFKDFNAAVEDLSACVKLDKENKS-------------------AYTYLGLAL 527
I+N K F+A + + L+K ++S Y+ GL+L
Sbjct: 182 SYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSL 241
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++ Y++A + K+I+L+ EAW + ++ L ++A+E ++ L I + +
Sbjct: 242 GNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALS 301
Query: 588 YHLRGLLLHGLGQHKKAIK 606
YH +L LG++++AIK
Sbjct: 302 YHRISEILRILGKYEEAIK 320
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 90/169 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI+ + G+Y A+ F++ L+ +P + E + +G+A E I + +A++ N
Sbjct: 474 NKGISHLALGQYEKALECFNEALRINPYFTEVYVNKGSALGNMEEYNEEIECYDKALELN 533
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW +G A + LG+ E+I ++++E PN ++ + +G+ FN A++
Sbjct: 534 QYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHAIKC 593
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++LD + GL L+ IG+Y++ E+ A+++ +F EA+
Sbjct: 594 FDKALELDSTLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAY 642
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTARAFQ 428
RI K+ D L++GI+ + KY +I FD++++ +P P I +G +
Sbjct: 185 RIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNL 244
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI ++I+ N EAW +G LG+ EAI+ KALE P+ A H
Sbjct: 245 ERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALSYHR 304
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + A++ + LD +N + GL+LS +G ++++ KA+ ++
Sbjct: 305 ISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINP 364
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
NF +A+ ++L +E AL C+ + + + + +GL L L +++++I+
Sbjct: 365 NFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIR 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 39/271 (14%)
Query: 375 KSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ KSI++D F S+G++ + G++ +I+ FD+ L +P + +A + + R
Sbjct: 322 QDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLR 381
Query: 430 ELEAAISDFTEAIQSNPSAGEAW----------KRRGQARAALGESV------------- 466
+ E A++ AI+ NP++ E W KR ++ E+V
Sbjct: 382 KNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSK 441
Query: 467 -----------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
EAI+ ++AL + + +GI + + A+E + ++++
Sbjct: 442 GFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPY 501
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G AL ++ EY + E + KA++L++ EAW + +L +++ C
Sbjct: 502 FTEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFN 561
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q + I+ + + Y+ +G+ LG+ AIK
Sbjct: 562 QSIEINPNYGEVYNNKGVSFENLGKFNHAIK 592
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 104/212 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI D+ + D E +G + + E +I+ F +A+ NP+ +A+
Sbjct: 313 GKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSA 372
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + L ++ +A+ ++ A+EF PNS ++ +G+ K + ++ + V L+
Sbjct: 373 KCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNH 432
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G +L+ + ++ +A + +A+ +D A+ + + L EKALEC
Sbjct: 433 KFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECF 492
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L I+ F++ Y +G L + ++ + I+
Sbjct: 493 NEALRINPYFTEVYVNKGSALGNMEEYNEEIE 524
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 117/238 (49%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + S + ++G++ ++ +Y +I F++ + + + A +G +
Sbjct: 389 CINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSKGFSLNHL 448
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI F A+ + + A+ +G + ALG+ +A++ ++AL P ++
Sbjct: 449 DKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYFTEVYVN 508
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G +++N +E ++L++ A+ G ALS++G+Y ++ ++I+++
Sbjct: 509 KGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINP 568
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N+ E + + +++L A++C + L +D + +GL+L +G++++ I+
Sbjct: 569 NYGEVYNNKGVSFENLGKFNHAIKCFDKALELDSTLFITHVNKGLVLAKIGKYERGIE 626
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ F ++G N +Y AI +D+I+ + +A++ +G + A + + +I F
Sbjct: 159 NIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFD 218
Query: 440 EAIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ I+ NP++ + +G + L EAI+ L K++E +A+ +G++
Sbjct: 219 KLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETL 278
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
++ A+E +++ + +Y + L +G+Y++A + K+I LD E W
Sbjct: 279 GKYDEAIEYYEKALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFS 338
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
DL E+++ + L I+ FS AY + L L +++ A+
Sbjct: 339 KGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLRKNEDAL 387
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L G ++ + AI F + IQ +AW +G A L + EAI+ A++
Sbjct: 28 LFELGHYYGENKDYKRAIDVFDKIIQLTQDP-KAWFYKGLALQNLKKIDEAIKCYDNAIK 86
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PN + L+ +G + K +++ A++ +K+D + + GLAL +G Y++A
Sbjct: 87 TDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAI 146
Query: 538 EAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
++ KAI + FL G L ++L E+A+E +++ I F A +G+
Sbjct: 147 KSFNKAINYEPKNIIFLYNKGELL---RNLKRYEEAIESYDRIINIKNDFFDAILNKGIS 203
Query: 595 LHGLGQHKKAIK 606
L L ++ ++I+
Sbjct: 204 LAHLEKYDESIE 215
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
KD+ A++ ++L ++ K A+ Y GLAL ++ + +A + + AI+ D N+ +A +
Sbjct: 39 KDYKRAIDVFDKIIQLTQDPK-AWFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNN 97
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
++ +KA++C + L ID +++ ++ +GL L LG++++AIK +
Sbjct: 98 KGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEP 157
Query: 617 PHLIW 621
++I+
Sbjct: 158 KNIIF 162
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N GKY +I+ F+Q ++ +P Y E +G + + AI F +A++ +
Sbjct: 542 NKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHAIKCFDKALELD 601
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +G A +G+ I+ + AL+ + + A+ +GI+ +N A +
Sbjct: 602 STLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAYMGKGIIFLTLHKYNDAKYE 661
Query: 506 LSACVKLD------KENKSAYTYLGLALSS---IGEYKKAEEAHLKAIQLDRNFLEAWGH 556
L + K+ K AY Y L ++S I E +K E + + + +
Sbjct: 662 LKIAENIFNEKNELKQAKEAYNYKLLTVNSSNLISELEKLEMEFISCLHFE--------N 713
Query: 557 LTQFYQDLANSEKALECL 574
L F +D+ N K + L
Sbjct: 714 LDDFRKDVFNVFKGINAL 731
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLL---AQSYE 68
L + + I D ++ + + AI + I LA L + ++I D L+ S
Sbjct: 173 LKRYEEAIESYDRIINIKNDFFDAILNKGISLA---HLEKYDESIEYFDKLIELNPNSPF 229
Query: 69 IQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
I + N+ LE ++ I+ DK+++L+ +A+ KG F LG+ +EA+ +E
Sbjct: 230 IHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYE 289
Query: 128 KGYEHALHQSADLKQFLELEELLTAAK-----QDRSVTCE-------YDVSNSMSSLTVS 175
K E A + + E+ +L + QD+S+ + + S+S L
Sbjct: 290 KALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRF 349
Query: 176 ESGLNANDKMSETSEN 191
E +N DK + N
Sbjct: 350 EESINPFDKALNINPN 365
>gi|449126815|ref|ZP_21763092.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
SP33]
gi|448945453|gb|EMB26324.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
SP33]
Length = 299
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 352 WDMLKETSNEAKRNKK--FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
++M T+ E K + + T+ ++ ++ L+RG+ +N GK +A+ F+ +K
Sbjct: 7 FNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDFNTAIK 66
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P A +G A + AA + +AI N + + R + + E V ++
Sbjct: 67 LNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEEYVHSL 126
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
DL+ A+ PN+A++ RGIV + ++ A++D + LD N ++Y L L ++
Sbjct: 127 NDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLVLIYAA 186
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
EY KA EA +++ ++L + + + +L +KAL+ + + + + +Y+
Sbjct: 187 KKEYPKAIEAADILLEIKSDWL-IFNVRAKLFFELGQCDKALDDCNKAIKLYPYIAYSYY 245
Query: 590 LRGLLLHGLGQHKKAIKDL 608
+RG + L +++KAIKD
Sbjct: 246 MRGWIYLQLKEYEKAIKDF 264
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S E + G + AI +KA+E +P + RG+ AA+ D
Sbjct: 2 SQAEYFNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDF 61
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ + SAY + GL L+ IG+ A + KAI L+ + + + Y +
Sbjct: 62 NTAIKLNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEE 121
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
+L L + ++ + Y RG++ L ++ AIKD + ++ H NLT +
Sbjct: 122 YVHSLNDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKK-TISLDSH---NLTSY 177
Query: 627 RNLCF 631
+ L
Sbjct: 178 KGLVL 182
>gi|146094076|ref|XP_001467149.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071513|emb|CAM70202.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 847
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 18/292 (6%)
Query: 355 LKETSNEAKRNKKFC------VTRISKSKSISVDF-------RLSRGIAQVNEGKYASAI 401
L T +A N+ FC TR + + ++D + GI+ ++G++A A+
Sbjct: 438 LSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGRHARAM 497
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
F + ++ D +P+ RG + Q AAI+D+T AI +P ++ R +
Sbjct: 498 QAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSK 557
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ D + AL+ + +A+ H RG K AAVE+ + ++L + A
Sbjct: 558 LGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALN 617
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQF-YQDLANSEKALECLQQVLY 579
GL + +Y KA +AI+LD RN W H + Y+++ E A+ +
Sbjct: 618 ARGLVYDQLQQYDKALADFTEAIRLDQRN--PVWLHNRGYTYRNMGELELAIADYSASIK 675
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
+ AY R LG+++ AI+D + R P + + R CF
Sbjct: 676 LAPHSHTAYTNRAFAFRKLGRYEAAIEDYTRALRE-HPGVATKVLNNRAYCF 726
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + ELEAAI +T A++ +P+ +A R L AI+D + AL+ +P
Sbjct: 415 RGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALDLDP 474
Query: 481 NS----------------------------------ADILHERGIVNFKFKDFNAAVEDL 506
+ D H RG K + AA+ D
Sbjct: 475 RNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADY 534
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + LD ++ ++ S +G Y++A + A+Q+D A+ + L
Sbjct: 535 TTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGR 594
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR- 625
E A+E L + + + A + RGL+ L Q+ KA+ D + R + +W R
Sbjct: 595 LEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNPVWLHNRG 654
Query: 626 --WRNL 629
+RN+
Sbjct: 655 YTYRNM 660
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +RG GE AI ++ALE P L R K K++ A+ED +A +
Sbjct: 412 FYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDYTAALD 471
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFLE----AWG--- 555
LD N + LG++ G + +A +A +AI+LD R F + A+
Sbjct: 472 LDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAI 531
Query: 556 ------------HLTQFYQ------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
H Y L E+A+ L ID + AYH RG L
Sbjct: 532 ADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAK 591
Query: 598 LGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFN 632
LG+ + A+++ + R + P L + L R L ++
Sbjct: 592 LGRLEAAVENFNCALR-LSPKLTFALN-ARGLVYD 624
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T A++
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTRALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +A++D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKE---NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+D + ++L E S+Y G + + + +A E +A++LD
Sbjct: 770 ADDFTRAIRLAPEVPSTASSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 37 ITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKAL 96
T R + A ++ +++ AI + Y NRA+C+S+L ++ + D AL
Sbjct: 519 FTQRKQGAYAAAIADYTTAISLDPKHFKSHY------NRAYCFSKLGRYEEAVADYAAAL 572
Query: 97 QLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+D AY +G A + LGR E A+
Sbjct: 573 QIDSGNANAYHNRGAALAKLGRLEAAV 599
>gi|428202816|ref|YP_007081405.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
gi|427980248|gb|AFY77848.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
Length = 739
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ ++Q LK P Y EA G+G Q+ + ++ + +AIQ P+ + R
Sbjct: 373 YDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAYEKAIQIQPNRWQPRLGRA 432
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q LG++ EAI+ K ++ +PN A+ V + ++ A+ +K+ EN
Sbjct: 433 QVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQYSEAIASYDRLLKMQPEN 492
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G A ++ EY+KA +++ KA+ + + AW +L EKA+E +
Sbjct: 493 SLAWYQQGWAWQNLREYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMNLEEYEKAVEAYAK 552
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + +A++ +G+ L LG++++AI S ++
Sbjct: 553 AVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQV 590
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 121/245 (49%), Gaps = 5/245 (2%)
Query: 366 KKFCVTRISKSKSISVD---FRLSRGIAQVNE--GKYASAISIFDQILKEDPMYPEALIG 420
K++ + I+ K+I + ++ G AQV + GK AI + +++K P EA +G
Sbjct: 405 KRYKESLIAYEKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLG 464
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+ + AI+ + ++ P AW ++G A L E +AI+ KA++ +P
Sbjct: 465 LAQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIKP 524
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + +++G V +++ AVE + V+ + A+ G+ALS +G ++A A+
Sbjct: 525 DLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAY 584
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A Q+ N+ +AW L E+A+ V+ + +A++ +G +L+ LG
Sbjct: 585 SQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGN 644
Query: 601 HKKAI 605
++ AI
Sbjct: 645 YEGAI 649
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
G+AQV +Y+ AI+ +D++LK P A +G A RE E AI + +A+
Sbjct: 464 GLAQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIK 523
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW ++G L E +A++ +KA++F+P + +GI K A+
Sbjct: 524 PDLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAA 583
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ A+ G L + Y++A A+ I+L + +AW + +L
Sbjct: 584 YSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLG 643
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N E A+ +Q + I++ + +A++ +G L L ++ +A+
Sbjct: 644 NYEGAIAAYKQTVAIERDYYQAWNSQGNALLLLKRYDEAV 683
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A N +Y AI +D+ + P A +G E E A+ + +A+Q P
Sbjct: 499 QGWAWQNLREYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQP 558
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G A + LG + EAI S+A + + N A +++G + + K + A+
Sbjct: 559 KLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAY 618
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++L + A+ G L ++G Y+ A A+ + + ++R++ +AW
Sbjct: 619 DTVIRLRPSDYQAWYNKGNVLYNLGNYEGAIAAYKQTVAIERDYYQAW 666
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G +N +Y A+ + + ++ P +A +G A + E AI+ +++A Q
Sbjct: 533 KGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKS 592
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW ++G L EAI + P+ + +G V + ++ A+
Sbjct: 593 NYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGNYEGAIAAY 652
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
V ++++ A+ G AL + Y +A A+ +A++ ++ +A
Sbjct: 653 KQTVAIERDYYQAWNSQGNALLLLKRYDEAVNAYDRALRYQPDYRQA 699
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I L + Y+ ++ LE ++ + KA+Q P L QA+
Sbjct: 512 AIKSYDKAVDIKPDLSSAWYQKGNVL------MNLEEYEKAVEAYAKAVQFQPKLHQAWY 565
Query: 108 LKGCAFSALGRKEEALSVWEKG------YEHALHQSA-DLKQFLELEELLTA 152
+G A S LGR EEA++ + + Y A +Q L Q EE ++A
Sbjct: 566 SQGIALSKLGRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISA 617
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L+ +G + ++ KD++ A+ +K+ E A+ G + YK++ A+
Sbjct: 355 NNATDLYRQGNILYELKDYDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAY 414
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ N + Q L +++A+E ++V+ I ++A+ + L Q
Sbjct: 415 EKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQ 474
Query: 601 HKKAI 605
+ +AI
Sbjct: 475 YSEAI 479
>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
Length = 295
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A D+++AIQ NP
Sbjct: 86 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTRAAQDYSKAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 205
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 206 SKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 266 KAKAANSYSRAVQLDPKYQPA 286
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 123
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + +A + + KAIQL+ + A+
Sbjct: 124 -------------------------YRYMG-------DSTRAAQDYSKAIQLNPQYDAAY 151
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFS 206
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++A+
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAVSL 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGDKAKAAN 271
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 272 SYSRAVQLDPKYQPA 286
>gi|425458571|ref|ZP_18838059.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827136|emb|CCI21817.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 695
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG I + +FK + A++D + + D +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWP 635
+ + +D AY RG + L ++ AI D + N + L F
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQA---------LNFLEYSGLGFQ--- 413
Query: 636 FIRRR-----LLCTRLLKSTVSF-AGLTLMEILIP----SSRNIGAKDCIPRMYVKRFTD 685
RR L+ T++ +++ +F GL L +++I S+ N A+D + + ++
Sbjct: 414 -YRRHESGQGLIITKIFENSPAFKQGLILDDLIIAINGKSTLNKSAEDLVELTVNQMSSE 472
Query: 686 SLPCVILS-KRESSGD 700
S+ V L +R+ GD
Sbjct: 473 SVTQVTLKLRRKDRGD 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++AL +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
NEA KRN K+ +R R A+ G++ AI +Q + +P A
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575
Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG + + + + A+ D+ +A+ ++P A+ RG LG++ AI D ++ +
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGLIHRELGDNRGAINDHTQVIR 635
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P+ A+ + RG+ + A+ED +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLLLHG-LGQHKKAIKDLS 609
G + +++A+KD +
Sbjct: 579 GWIHSNRFKAYQEALKDYN 597
>gi|425447841|ref|ZP_18827823.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
aeruginosa PCC 9443]
gi|389731517|emb|CCI04438.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
aeruginosa PCC 9443]
Length = 571
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 97/189 (51%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+ N G AI+ +Q +K + A G A+ + + AI+DF +AIQ NP
Sbjct: 356 MGNYNLGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDY 415
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
A+ RG A++ LG+ AI+D ++A++ P+ AD + RG + D A+ D +
Sbjct: 416 ANAYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYNQ 475
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KL+ + Y G A ++G+ + A + +AI+L+ +F + + Y+ L ++E
Sbjct: 476 AIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNSDFAVPYYNRGLIYKKLNDNE 535
Query: 569 KALECLQQV 577
KA++ +Q
Sbjct: 536 KAIKDFRQA 544
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A+ G AI+ F+Q ++ +P Y A RG+A++ + + AI D+ +AIQ N
Sbjct: 387 NNGVAKYKLGDNQGAITDFNQAIQINPDYANAYYDRGSAKSNLGDKQGAIKDYNQAIQIN 446
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG A+ LG+ AI D ++A++ P+ A + RG + D A+ D
Sbjct: 447 PDDADFYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIAD 506
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ +KL+ + Y GL + + +KA + +A +L R
Sbjct: 507 YNQAIKLNSDFAVPYYNRGLIYKKLNDNEKAIKDFRQAAKLHR 549
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ I+ D+ RG A+ N G AI ++Q ++ +P + RG A+
Sbjct: 401 AITDFNQAIQINPDYANAYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAK 460
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+ +AI+ NP + RG A+ LG+ AI D ++A++ + A
Sbjct: 461 YNLGDKQGAIADYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNSDFAVP 520
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ RG++ K D A++D KL ++
Sbjct: 521 YYNRGLIYKKLNDNEKAIKDFRQAAKLHRQ 550
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 77/148 (52%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG++ AI D ++A++ + A + G+ +K D A+ D + ++++ + +AY
Sbjct: 361 LGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDYANAYY 420
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G A S++G+ + A + + +AIQ++ + + + + +L + + A+ Q + ++
Sbjct: 421 DRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYNQAIKLN 480
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F+ Y+ RG + LG + AI D +
Sbjct: 481 PDFAFPYNNRGWAKYNLGDKQGAIADYN 508
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
N+ D A+ D + +KL+ ++ AY G+A +G+ + A +AIQ++ ++
Sbjct: 358 NYNLGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDYAN 417
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ +L + + A++ Q + I+ + Y+ RG + LG + AI D +
Sbjct: 418 AYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYN 474
>gi|427720339|ref|YP_007068333.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
gi|427352775|gb|AFY35499.1| serine/threonine protein kinase with TPR repeats [Calothrix sp. PCC
7507]
Length = 670
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS + L RGI + + +AI D ++ +P +A RG A+ ++ AA+S
Sbjct: 442 KSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRGLAQFSNQQKHAAVS 501
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DFT AI +P EA+ RG A + LG +EA D +K L+ P S+ RG F F
Sbjct: 502 DFTNAINLSPKYIEAYLSRGDAHSELGNKLEATADYNKVLQINPKSSIAYVRRGAHRFSF 561
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D A++D + +KLD +N +AY G G K A E + +AI+++ ++ A+
Sbjct: 562 GDVQGAIKDYTQAIKLDSKNAAAYNNRGNVHLERGNQKAASEDYSQAIKVNPSYALAY 619
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I ++ R RG GKY +AI+ + + + + A GRG AR ++
Sbjct: 368 SKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKD 427
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A DF++AI + EA+ +RG R L + AIQDL A+E PN A ++RG
Sbjct: 428 HQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRG 487
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS---------------------- 528
+ F + +AAV D + + L + AY G A S
Sbjct: 488 LAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGNKLEATADYNKVLQINPKS 547
Query: 529 ------------SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
S G+ + A + + +AI+LD A+ + + + N + A E Q
Sbjct: 548 SIAYVRRGAHRFSFGDVQGAIKDYTQAIKLDSKNAAAYNNRGNVHLERGNQKAASEDYSQ 607
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++ ++ AY+ RGL+ G AI D ++
Sbjct: 608 AIKVNPSYALAYYNRGLIKAKQGNRASAIGDFQQAAK 644
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + A+ D T+AI+ NP A+ RRG A LGE +A D SKA++ P
Sbjct: 316 RGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLNP 375
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ ++RG ++ + AA+ D + + L+ N AY G+A + +++ A
Sbjct: 376 RDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAFGDF 435
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI L N+ EA+ + L + A++ L + ++ +KAY+ RGL Q
Sbjct: 436 SKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRGLAQFSNQQ 495
Query: 601 HKKAIKDLSSG 611
A+ D ++
Sbjct: 496 KHAAVSDFTNA 506
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A + + ++ +P A RG + AAI+D+T+AI N
Sbjct: 350 RGDAFYRLGEYQKAQADSSKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNS 409
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR + + A D SKA+ + N + +RGI+ + K AA++DL
Sbjct: 410 RNAYAYYGRGIARVQMKDHQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDL 469
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++L+ + AY GLA S + A AI L ++EA+ + +L N
Sbjct: 470 DAAIELNPNDAKAYYQRGLAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGN 529
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A +VL I+ + S AY RG G + AIKD +
Sbjct: 530 KLEATADYNKVLQINPKSSIAYVRRGAHRFSFGDVQGAIKDYT 572
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG + +G A++DL++A+E P +A + RG ++ ++ A D S ++L+
Sbjct: 315 QRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLN 374
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALE 572
+ +AY G +G+Y A + KAI L+ RN +G Q + + + A
Sbjct: 375 PRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQ-MKDHQGAFG 433
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + +++AY RG++ L Q + AI+DL +
Sbjct: 434 DFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAA 472
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+++RG+ ++ +++ AV+DL+ ++L+ +N AY G A +GEY+KA+ KAIQ
Sbjct: 313 IYQRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQ 372
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ A+ + +L A+ + + ++ R + AY+ RG+ + H+ A
Sbjct: 373 LNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAF 432
Query: 606 KDLS 609
D S
Sbjct: 433 GDFS 436
>gi|427730150|ref|YP_007076387.1| hypothetical protein Nos7524_2981 [Nostoc sp. PCC 7524]
gi|427366069|gb|AFY48790.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 280
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G Q +G +AI+ ++Q L +DP Y A RG + + AI+D+ EAI+
Sbjct: 65 QGQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAA 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG ARA+LG+ AI D ++A+ PN A+ + RG D + ++ED
Sbjct: 125 NDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDF 184
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ AY G A ++ G+ + A + +AI+L+RNF A+ + +
Sbjct: 185 NQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGD 244
Query: 567 SEKALECLQQV 577
+ AL+ LQ+
Sbjct: 245 RQAALQDLQKA 255
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G + +I F+Q ++ +P Y A RG ARA Q +L+ AISD+ +AI+ N
Sbjct: 166 NRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLN 225
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
+ G A+ RG ARAA G+ A+QDL KA + F+ + + L+++ + N +
Sbjct: 226 RNFGPAYNNRGNARAAQGDRQAALQDLQKAADIFQKQNNNDLYQQVMNNIQ 276
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q L+AAI+ + +A+ +P A+K RG LG+ +AI D ++A+
Sbjct: 65 QGQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAA 124
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + RG D A+ D + ++L AY G ALS G+ + E
Sbjct: 125 NDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDF 184
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L+ + A+ + + + A+ Q + +++ F AY+ RG G
Sbjct: 185 NQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGD 244
Query: 601 HKKAIKDL 608
+ A++DL
Sbjct: 245 RQAALQDL 252
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ + G AI+ +++ ++ P Y EA RG A + Q + +I DF +AI+ NP
Sbjct: 133 RGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDFNQAIRLNP 192
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG ARAA G+ AI D ++A+ N + RG D AA++DL
Sbjct: 193 RYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGDRQAALQDL 252
Query: 507 SACVKL 512
+
Sbjct: 253 QKAADI 258
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI+ +++ ++ EA RG ARA + AI+D+ EAI+ +
Sbjct: 98 ARGLTYFDLGDKQKAIADYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLS 157
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A + G+ +I+D ++A+ P A + RG D A+ D
Sbjct: 158 PNYAEAYNNRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISD 217
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ ++L++ AY G A ++ G+ + A
Sbjct: 218 YNQAIRLNRNFGPAYNNRGNARAAQGDRQAA 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AG A+ + GQ + A G AI ++AL +P A RG+ F D A+
Sbjct: 56 NSQAGSAYIQ-GQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIA 114
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L + A+ G A +S+G+ + A + +AI+L N+ EA+ +
Sbjct: 115 DYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQ 174
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++E Q + ++ R++ AY+ RG G + AI D + R
Sbjct: 175 GDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIR 223
>gi|423452169|ref|ZP_17429022.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
gi|401142240|gb|EJQ49789.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
Length = 918
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++++ ++ D Y A I RG Q E E AI D+T+ I+ + + + R A
Sbjct: 572 AIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAY 631
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + EAI+D +KA+E + N A + RG + + + A+ + + ++LD
Sbjct: 632 IQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVF 691
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y S +G+Y++A E KAI LD N A+ Y EKA+E ++V+
Sbjct: 692 YCNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIE 751
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS-----SGSRTMM 616
+D+ + AY R + L ++++AI+D + GSR +
Sbjct: 752 LDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVF 793
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG +G+Y AI + ++++ D R A + E AI D +AI+
Sbjct: 591 INRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAYIQLEKYEEAIEDCNKAIEL 650
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + + RRG + LG+ +AI + +KA+E + N A R V + + A+E
Sbjct: 651 DGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVYSQLGKYEEAIE 710
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + LD N +AY+ + G+Y+KA E K I+LD N A+ + + Y L
Sbjct: 711 ECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENNASAYSNRSYAYNQL 770
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+E + + +D + Y+ RG + L ++K+AI+D
Sbjct: 771 EKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIED 813
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI ++++ D A R A + E AI D +AI+ + S +
Sbjct: 737 GKYEKAIEDCKKVIELDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNN 796
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF---------KFKDFNAAVED 505
RG A L + EAI+D KA+E N D+ +R N + + + A+ED
Sbjct: 797 RGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSKRIKGNAYSNRSHAYNQLEKYKEAIED 856
Query: 506 LSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L + Y G A + +Y+KAE+ ++KAI+++ ++ EA
Sbjct: 857 CKKAIELGTDKTEVLYYNRGYAYEKLKDYQKAEKDYIKAIEVNPDYEEA 905
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 15/247 (6%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D F RG GKY AI ++ ++ D R + +
Sbjct: 645 NKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVYSQLGK 704
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI + +AI + + A+ R G+ +AI+D K +E + N+A R
Sbjct: 705 YEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENNASAYSNRS 764
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + A+ED + +KLD Y G A + + +YK+A E KAI+L N
Sbjct: 765 YAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIELIENK 824
Query: 551 LE---------AWGHLTQFYQDLANSEKALE-CLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
++ A+ + + Y L ++A+E C + + + Y+ RG L
Sbjct: 825 VDVHSKRIKGNAYSNRSHAYNQLEKYKEAIEDCKKAIELGTDKTEVLYYNRGYAYEKLKD 884
Query: 601 HKKAIKD 607
++KA KD
Sbjct: 885 YQKAEKD 891
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAIQDLSKA 475
L+G + F++ LE + IQ+ + + G + S +AI+ +KA
Sbjct: 525 LMGLINKKQFEQALE-----LIQQIQTANKTAKIYFFEGFIYDKMDNNNSKKAIEMYNKA 579
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E + N RG +N + ++ A+ D + ++LD + Y + A + +Y++
Sbjct: 580 IELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAYIQLEKYEE 639
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A E KAI+LD N + Y L KA+ + + +D + Y R +
Sbjct: 640 AIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVY 699
Query: 596 HGLGQHKKAIKD 607
LG++++AI++
Sbjct: 700 SQLGKYEEAIEE 711
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
CNRAF YSQL ++ I +C KA+ LD AY + ++ G+ E+A+
Sbjct: 693 CNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIE-------- 744
Query: 133 ALHQSADLKQFLELEELLTAAKQDRS 158
D K+ +EL+E +A +RS
Sbjct: 745 ------DCKKVIELDENNASAYSNRS 764
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR++ Y+QLE ++ I DC+KA++LD + Y +G A++ L + +EA+ +K E
Sbjct: 762 NRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIE 819
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +++K I LD A Y+ +RA+ Y QLE ++ I DC+KA++LD Y
Sbjct: 606 AILDYTKVIE-LDGNKATFYD-----HRAYAYIQLEKYEEAIEDCNKAIELDGNKAMFYN 659
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G +S LG+ +A+ K E
Sbjct: 660 RRGNIYSQLGKYGKAIGECNKAIE 683
>gi|428774009|ref|YP_007165797.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
gi|428688288|gb|AFZ48148.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
Length = 724
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N +Y AI+ + +++ DP Y A G A AI+ +T AI+ N
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P G A+ R + +L + EAI+D ++A+EF SAD+ RG +A+ D
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIEFNFVSADVYFRRGNAYRNLGSHESAIAD 626
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G++ S+G+ ++A + +AI+L ++ ++ +L Y+D
Sbjct: 627 YTRAIELEASHADAYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLGLVYRDQG 686
Query: 566 NSEKALECLQQ 576
+ ALE L Q
Sbjct: 687 DINNALEHLGQ 697
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q E+AI +T A++ NP +A+ RG A LG +AI D ++ +E +P D +
Sbjct: 447 QENYESAIEQYTLAVEINPDFADAYYNRGLTYADLGLDDQAIADYTRTIEIDPEYLDAYN 506
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI+ +++ A+ D + D + A+ LG+A S+G ++ A ++ +AI+L+
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566
Query: 548 RNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ A+ G L Q+ + + + +A+E + + Y RG LG
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIE-------FNFVSADVYFRRGNAYRNLGS 619
Query: 601 HKKAIKDLS 609
H+ AI D +
Sbjct: 620 HESAIADYT 628
>gi|409196336|ref|ZP_11224999.1| tetratricopeptide repeat protein [Marinilabilia salmonicolor JCM
21150]
Length = 713
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
++++ ++ GIA + + A ++ +IL E P A + RG AR + A+ DF
Sbjct: 125 LNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNMVTAYLNRGLARFSANDTVGALQDF 184
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++A++ NP + + R GE +A++D+ A+ P A + RGI+ ++
Sbjct: 185 SQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDVDAAVLLRPEEASLYMNRGIIRYQLDS 244
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ D + V+LD N Y G+ + IG+ A + + L L +
Sbjct: 245 LRGTMADFNKFVELDPRNAMGYNNRGILRAEIGDLDGAINDFSRVLALRGEDLPTLYYRG 304
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
YQ+ + KAL V FS Y+ R + LGQ + A D ++ + M
Sbjct: 305 MLYQEKGDFRKALSDYNIVADAYPDFSPVYYNRAEVRMALGQEEAARLDYNTAMKLEM 362
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI ++I + Q L DP+ +I G A ++ E A ++E + +P
Sbjct: 99 RGIVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILDESP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG AR + ++V A+QD S+A+E P D R +V + +F A++D+
Sbjct: 159 NMVTAYLNRGLARFSANDTVGALQDFSQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDV 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A V L E S Y G+ + + K ++LD + + ++ +
Sbjct: 219 DAAVLLRPEEASLYMNRGIIRYQLDSLRGTMADFNKFVELDPRNAMGYNNRGILRAEIGD 278
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ +VL + + RG+L G +KA+ D
Sbjct: 279 LDGAINDFSRVLALRGEDLPTLYYRGMLYQEKGDFRKALSD 319
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F+QI+K P E R + + A+ D A++ NP +A+ RG
Sbjct: 41 YILAIQYFNQIIKAKPYLSEPYYYRAVGKYHLEDFPGALEDCDRALEINPYMIDAYNLRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L +I D + L+ +P + +++ GI + KDF A + S +
Sbjct: 101 IVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNM 160
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+AY GLA S + A + +A++ + + + + + Y EKAL+ +
Sbjct: 161 VTAYLNRGLARFSANDTVGALQDFSQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDVDA 220
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + Y RG++ + L + + D +
Sbjct: 221 AVLLRPEEASLYMNRGIIRYQLDSLRGTMADFN 253
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +++++ P + A R ++ R+ EA++ D+++AI NP EA+ RG
Sbjct: 604 YNLIIDDLNKVIELAPEFEFAWFNRAFMKSLLRDFEASVEDYSKAIALNPDFAEAYFNRG 663
Query: 457 QARAALGESVEAIQDLSKALE 477
R L E+ + DLSKA E
Sbjct: 664 LNRIYLEETTKGTMDLSKAGE 684
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ F + L+ +P L G A ++ AIS A++ NP +AW RG +
Sbjct: 22 VEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGIVLS 81
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ EAI KA+ P+ A + G+ ++ + A+E CV +D+E+ +A+
Sbjct: 82 DAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAAAW 141
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+GLA G + KAEE+ KA++LD + ++ +L Y L E A+EC ++L I
Sbjct: 142 YNMGLAYYESGRFNKAEESFKKALELDES-VDTLNNLGIVYGKLRQYEMAMECFNRILEI 200
Query: 581 DKRFSKAYH 589
D S A +
Sbjct: 201 DPENSAATY 209
Score = 65.5 bits (158), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E ++ SK LE EP + +L+ GI ++ + A+ + ++L+ + A+ G+
Sbjct: 20 EEVEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGIV 79
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
LS G+Y +A KAI L+ + AW ++ Y + N KA+EC ++ + ID+ +
Sbjct: 80 LSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAA 139
Query: 587 AYHLRGLLLHGLGQHKKA 604
A++ GL + G+ KA
Sbjct: 140 AWYNMGLAYYESGRFNKA 157
Score = 53.5 bits (127), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + GKY AI+ F++ + +P A G A + AI + + + +
Sbjct: 75 NRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSID 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
AW G A G +A + KALE + S D L+ GIV K + + A+E
Sbjct: 135 EEHAAAWYNMGLAYYESGRFNKAEESFKKALELD-ESVDTLNNLGIVYGKLRQYEMAMEC 193
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
+ +++D EN SA TY L L + E
Sbjct: 194 FNRILEIDPEN-SAATYNLLILKRLME 219
>gi|119510384|ref|ZP_01629518.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
gi|119464913|gb|EAW45816.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
Length = 671
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ L RGI + Y +A FD I+K +P +G +A + AAI ++T+
Sbjct: 449 IEAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQ 508
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP+ A+ RRG + LG +EA +D ++ L+ P + RGI F D+
Sbjct: 509 AINRNPNYAVAYLRRGNMHSELGYKLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQ 568
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ D + ++L+ ++ +AY G A G YK A E + +AI ++ + A+
Sbjct: 569 GAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANEDYTQAIAINSKYGLAY 622
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y A + + ++ +P A RG A + + AISD+T+AI+ N
Sbjct: 353 RGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGFALYELGKYKEAISDYTKAIELNS 412
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A + E+ +A +D S A+ +PN + +RGI+ + K + A +D
Sbjct: 413 GNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYIEAYLQRGILRRRLKIYRTANQDF 472
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A +K++ ++ Y GL +S + A + + +AI + N+ A+ + +L
Sbjct: 473 DAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQAINRNPNYAVAYLRRGNMHSELGY 532
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A E +VL ++ ++ AY+ RG+ G ++ AI D
Sbjct: 533 KLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQGAIAD 573
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AA+ +FT+AI + A+ +RG A LG+ +A D +KA+E P +A+ ++RG
Sbjct: 330 QAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGF 389
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ + A+ D + ++L+ N AY GLAL + E + A E AI+L N++
Sbjct: 390 ALYELGKYKEAISDYTKAIELNSGNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYI 449
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + L A + ++ I+ ++ Y+ +GL+ Q AIK+ +
Sbjct: 450 EAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQA 509
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
+G+ Q + + +AI + Q + +P Y A + RG + +LEA D+ +Q N
Sbjct: 489 KGLIQASNNQKYAAIKEYTQAINRNPNYAVAYLRRGNMHSELGYKLEAT-EDYNRVLQLN 547
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P G A+ RG R + G+ AI D +KA+E A + RG N++ ++ AA ED
Sbjct: 548 PQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANED 607
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + ++ + AY G+ + G + A +AI+L R
Sbjct: 608 YTQAIAINSKYGLAYYNRGVTRAKQGNRQGAIADFQQAIRLFR 650
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 19/144 (13%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L++ G+ ++ ++ AAVE+ + + LD EN SAY G A +G+Y++A+ KAI+
Sbjct: 316 LYQEGLKKYQAGNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIE 375
Query: 546 L---------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
L DR F A L ++ + +++ KA+E ++ + AY+ RGL L
Sbjct: 376 LNPQNANAYYDRGF--ALYELGKYKEAISDYTKAIE-------LNSGNAYAYYGRGLALV 426
Query: 597 GLGQHKKAIKDLSSGSRTMMPHLI 620
+ +++ A +D S+ R + P+ I
Sbjct: 427 QMQENRDANEDFSTAIR-LQPNYI 449
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+ +KE + RN + V L RG G A ++++L+
Sbjct: 499 KYAAIKEYTQAINRNPNYAVAY------------LRRGNMHSELGYKLEATEDYNRVLQL 546
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P + A RG R + + AI+D T+AI+ N A+ RG A G A +
Sbjct: 547 NPQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANE 606
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
D ++A+ + RG+ K + A+ D ++L +E
Sbjct: 607 DYTQAIAINSKYGLAYYNRGVTRAKQGNRQGAIADFQQAIRLFRE 651
>gi|434387356|ref|YP_007097967.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
gi|428018346|gb|AFY94440.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
Length = 607
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 119/301 (39%), Gaps = 6/301 (1%)
Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET------SNEAKRNK 366
S LND + + I +NK++ + K F + T S K
Sbjct: 176 SGGPVLNDRGELIAVHGRGDIQENKATANANVFVKTGFNLGIPANTFVQIAGSMGVKIGG 235
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
K ++ ++ + D + +G Y AI FD+ + P Y A I R A
Sbjct: 236 KTAPVIATQPRTTTADDFFVTAATKFRQGDYPGAIQGFDRAIATKPNYTAAYIARAEANL 295
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ E I D A+ NP + +A+ RG + +G++ A DL +A+ P +
Sbjct: 296 YLDNEEEVIRDANRALNLNPRSDDAYALRGGGKIGIGDAKGAFADLDRAIALNPRNPRGY 355
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG ++ D A++ + + +D AY +A +GE + AE +A+Q+
Sbjct: 356 FYRGFGQMQYGDPTQALQSIDKALAIDPNLSDAYAVRAVAKYLLGEPQAAESDFARALQI 415
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N A+ + E LQ+ + I + + Y LRG G + +AI
Sbjct: 416 NANNFLAYVYRGFIRVVAGKKETGFADLQKAIAISPKNAIGYSLRGQAYANTGDYARAIS 475
Query: 607 D 607
+
Sbjct: 476 E 476
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ G A + D+ + +P P RG + + A+ +A+ +P
Sbjct: 324 RGGGKIGIGDAKGAFADLDRAIALNPRNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDP 383
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A+ LGE A D ++AL+ N+ RG + DL
Sbjct: 384 NLSDAYAVRAVAKYLLGEPQAAESDFARALQINANNFLAYVYRGFIRVVAGKKETGFADL 443
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLTQ-- 559
+ + +N Y+ G A ++ G+Y +A + +A+Q+ N+ A+ H+ Q
Sbjct: 444 QKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQIKPNYGSAYANRGVAHMQQQN 503
Query: 560 FYQDLANSEKALE 572
F Q LA+ EKAL+
Sbjct: 504 FKQGLADVEKALK 516
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q+ G A+ D+ L DP +A R A+ E +AA SDF A+Q N
Sbjct: 358 RGFGQMQYGDPTQALQSIDKALAIDPNLSDAYAVRAVAKYLLGEPQAAESDFARALQINA 417
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG R G+ DL KA+ P +A RG D+ A+ +
Sbjct: 418 NNFLAYVYRGFIRVVAGKKETGFADLQKAIAISPKNAIGYSLRGQAYANTGDYARAISEY 477
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ SAY G+A +K+ KA++L+ + A+ +Y + +
Sbjct: 478 NRALQIKPNYGSAYANRGVAHMQQQNFKQGLADVEKALKLNPSNETAYQGRAIYYINQKD 537
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++L + I+ +Y ++G+ GLG ++A
Sbjct: 538 FRRSLADATRASQINGASPDSYVIQGVSYIGLGNRERA 575
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAIQ 443
RG +V GK + F + K + P+ IG RG A A + AIS++ A+Q
Sbjct: 426 RGFIRVVAGKKETG---FADLQKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQ 482
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P+ G A+ RG A + + D+ KAL+ P++ R I KDF ++
Sbjct: 483 IKPNYGSAYANRGVAHMQQQNFKQGLADVEKALKLNPSNETAYQGRAIYYINQKDFRRSL 542
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +++ + +Y G++ +G ++A+ A KA QL E G+ + YQD
Sbjct: 543 ADATRASQINGASPDSYVIQGVSYIGLGNRERAKIALQKAAQL----YEKRGNRGKDYQD 598
>gi|390441071|ref|ZP_10229255.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
gi|389835636|emb|CCI33381.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
Length = 248
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ A++ FD+ L+ P PEA RG A A A++ F +A++
Sbjct: 24 NRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGVALADLGRFAEALASFDKALEIK 83
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A LG EA+ KALE +P+ + RG F A+
Sbjct: 84 PDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDHQAWYNRGSALDDLGRFEEAIAS 143
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G L+ +G YK A E+ +AI+++ N + + Y
Sbjct: 144 YDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDRAIKINPNDANPYYNKAVCYGLQN 203
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D +
Sbjct: 204 NVELAIENLQRAINLDVEY 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI+ + A++ P EAW RG A LG EA+ +ALE +P+ + + RG
Sbjct: 1 MEEAIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRG 60
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F A+ +++ ++ A+ G+AL+ +G + +A + KA+++ +
Sbjct: 61 VALADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDD 120
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+AW + DL E+A+ + L I A+ RG +L +G++K A++
Sbjct: 121 HQAWYNRGSALDDLGRFEEAIASYDRALEIKPDDPYAWDNRGYVLTCMGRYKDALE 176
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +D+ L+ P EA RG A LE A++ F A++ P EAW RG A
Sbjct: 4 AIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGVAL 63
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A LG EA+ KALE +P+ + RG+ F A+ +++ ++ A
Sbjct: 64 ADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDHQA 123
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G AL +G +++A ++ +A+++ + AW + + + ALE + +
Sbjct: 124 WYNRGSALDDLGRFEEAIASYDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDRAIK 183
Query: 580 IDKRFSKAYH 589
I+ + Y+
Sbjct: 184 INPNDANPYY 193
>gi|428220978|ref|YP_007105148.1| hypothetical protein Syn7502_00890 [Synechococcus sp. PCC 7502]
gi|427994318|gb|AFY73013.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 246
Score = 87.0 bits (214), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 80/164 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G Y AI+ +D+ + +P + A RG A+ + + AI+D+ +A NP
Sbjct: 30 RGTVKARSGDYQGAIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGAIADYDKATSINP 89
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A RG A+ LG+ AI D KA+ P+ A+ + RGI D+ A+ D
Sbjct: 90 DYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKDNLGDYQGAIADY 149
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ ++ +A+ GLA +G Y+ A + KAI ++ N+
Sbjct: 150 DKVISINPNYANAFYNRGLAKYYLGNYQGAVADYDKAISINPNY 193
Score = 84.0 bits (206), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP +A RGT +A + + AI+D+ +AI NP A+ RG A+ LG AI
Sbjct: 20 DPTDAQAFSDRGTVKARSGDYQGAIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGAIA 79
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D KA P+ A + RG D+ A+ D + ++ + +A+ G+A ++
Sbjct: 80 DYDKATSINPDYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKDNL 139
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G+Y+ A + K I ++ N+ A+ + L ++Y L N + A+ + + I+ ++ +
Sbjct: 140 GDYQGAIADYDKVISINPNYANAFYNRGLAKYY--LGNYQGAVADYDKAISINPNYAHVF 197
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
R + G AIKD++
Sbjct: 198 FNRSIAKLKSGDKNGAIKDIT 218
Score = 82.8 bits (203), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + K+ SI+ D+ +RG A+ N G Y AI+ +D+ + +P Y A R
Sbjct: 73 NYQGAIADYDKATSINPDYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNR 132
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A+ + + AI+D+ + I NP+ A+ RG A+ LG A+ D KA+ PN
Sbjct: 133 GIAKDNLGDYQGAIADYDKVISINPNYANAFYNRGLAKYYLGNYQGAVADYDKAISINPN 192
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A + R I K D N A++D++ V+L
Sbjct: 193 YAHVFFNRSIAKLKSGDKNGAIKDITISVEL 223
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ SI+ DF ++ RG+A+ G Y AI+ +D+ +P Y A+ RGTA+ +
Sbjct: 49 KAISINPDFAVAFYNRGLAKYYLGNYQGAIADYDKATSINPDYASAIFNRGTAKDNLGDY 108
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ +AI NP A+ RG A+ LG+ AI D K + PN A+ + RG+
Sbjct: 109 QGAIADYDKAIGINPDYANAFYNRGIAKDNLGDYQGAIADYDKVISINPNYANAFYNRGL 168
Query: 492 VNFKFKDFNAAVEDLSACVKLD 513
+ ++ AV D + ++
Sbjct: 169 AKYYLGNYQGAVADYDKAISIN 190
Score = 48.5 bits (114), Expect = 0.012, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P A +RG V + D+ A+ D + ++ + A+ GLA +G Y+ A
Sbjct: 18 DLDPTDAQAFSDRGTVKARSGDYQGAIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGA 77
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KA ++ ++ A + +L + + A+ + + I+ ++ A++ RG+
Sbjct: 78 IADYDKATSINPDYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKD 137
Query: 597 GLGQHKKAIKD 607
LG ++ AI D
Sbjct: 138 NLGDYQGAIAD 148
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 87.0 bits (214), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 87/164 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI GKY AI FD++LK DP AL +G + + A+ F + ++ +
Sbjct: 16 NKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELD 75
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A +G+ EAI+ K+LE +PN+++ + +GI K + + A++
Sbjct: 76 PKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKS 135
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +K A+ GLAL+ + +Y++A E K ++LD N
Sbjct: 136 FNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 80/157 (50%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+AW +G G+ EAI+ K L+ +P + L +G+ A++
Sbjct: 12 KAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKV 71
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++LD +N A+ GLA IG+Y++A +++ K+++LD N E W + + L ++
Sbjct: 72 LELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQE 131
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AL+ + L + A++ +GL L L ++++A++
Sbjct: 132 ALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALE 168
Score = 62.4 bits (150), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 76/151 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ K +V ++G+ GK A+ FD++L+ DP EA +G A
Sbjct: 33 CFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELDPKNAEAWNNKGLAFEDI 92
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + ++++ +P+ E W +G + L + EA++ +KAL+ PN D +
Sbjct: 93 GKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNN 152
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ + K + A+E +KLD +++A
Sbjct: 153 KGLALAQLKKYQEALECFDKVLKLDPNSETA 183
Score = 58.9 bits (141), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A + GKY AI +D+ L+ DP E +G + + + A+ F +A++S
Sbjct: 84 NKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSY 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P+ +AW +G A A L + EA++ K L+ +PNS L + I+
Sbjct: 144 PNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPNSETALKAKKII 190
Score = 47.0 bits (110), Expect = 0.039, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ + +GI K + A+E +K+D +N A G+ +G+ ++A +
Sbjct: 9 NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYF 68
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K ++LD EAW + ++D+ ++A++ + L +D S+ ++ +G+ L L +
Sbjct: 69 DKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEK 128
Query: 601 HKKAIKDLSSGSRTMMPHLI--WN 622
+++A+K + ++ P+ + WN
Sbjct: 129 YQEALKSFNKALKS-YPNYVDAWN 151
Score = 44.7 bits (104), Expect = 0.19, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 53/93 (56%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ N A+ G+ L G+YK+A E K +++D + A + Y L +++AL+
Sbjct: 8 RNNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDY 67
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+VL +D + ++A++ +GL +G++++AIK
Sbjct: 68 FDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIK 100
>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
Length = 707
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQA LG++ EA++ + L F P ++ + + + + ++AA + L + +
Sbjct: 407 RGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + +FS+A++ +G++L LG+ +A++ + ++
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKA 566
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + L+
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + +L + + A E++ KA Q + F +A H +Q Q L +ALE
Sbjct: 501 DNALIWYQKANSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH + + ++AI R
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARR 599
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ FD++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++ ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA 570
+F + +A+ EKA
Sbjct: 585 ERFQEAIASYEKA 597
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAWKR 454
Y A+ +DQ L + ALI A + + ++ A+ +++A Q NP +A
Sbjct: 485 YEGAVKAYDQALALES--DNALIWYQKANSLYQLNKINDALESYSKAGQFNPQFSQAHYS 542
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG EA++ ++A + N +G + + + F A+ ++
Sbjct: 543 QGIILQKLGRKSEALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISS 602
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + +G A +G+Y +A A+ +AIQ ++ E W L L E+A++
Sbjct: 603 QKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAY 662
Query: 575 QQVL 578
Q+ L
Sbjct: 663 QESL 666
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ +++ + F T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705
>gi|359462560|ref|ZP_09251123.1| hypothetical protein ACCM5_27771 [Acaryochloris sp. CCMEE 5410]
Length = 265
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L+ G +A + + AIS + +AIQ NP A+ RG A LG+ AI D ++A
Sbjct: 43 QTLLQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRA 102
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI-GEYK 534
LE EP+ A L+ RG DF+ A+ DL+ ++L AY + L ++ G+++
Sbjct: 103 LEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQ 162
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA + +AI +F +A+ + + Y + ++ A+ + + ++ + ++AY RGLL
Sbjct: 163 KALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGNRGLL 222
Query: 595 LHGLGQHKKAIKDL 608
G + AI DL
Sbjct: 223 KAQTGDKQGAIVDL 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G Y AISI++Q ++ +P A I RG A + + AI+DF A++
Sbjct: 46 LQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEI 105
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
P A RG+AR+ +G+ AI DL++A+ +PN A+ + R I+ + + A+
Sbjct: 106 EPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQKAL 165
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+DL+ + + AY G +++ + A + KAI+L+ EA+G+
Sbjct: 166 KDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGN 218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 35/173 (20%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+A + G Y AI+ F++ L+ +P + AL RG AR+ + + AI D T+AI+
Sbjct: 80 IDRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRL 139
Query: 445 NPSAGEA--------------WKR---------------------RGQARAALGESVEAI 469
P+ EA W++ RG+ AA+ ++ AI
Sbjct: 140 KPNYAEAYNIRAIILGAVQGQWQKALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAI 199
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ +KA+E A+ RG++ + D A+ DL L KE + Y
Sbjct: 200 ANYTKAIELNAKLAEAYGNRGLLKAQTGDKQGAIVDLRYAANLFKEQGNQGNY 252
>gi|425471352|ref|ZP_18850212.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389882767|emb|CCI36788.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 695
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG I + +FK + A++D + + D + +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A + + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWP 635
+ + +D AY RG + L ++ AI D + N + L F
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQA---------LNFLEYSGLGFQ--- 413
Query: 636 FIRRR-----LLCTRLLKSTVSF-AGLTLMEILIP----SSRNIGAKDCIPRMYVKRFTD 685
RR L+ T++ +++ +F GL L +++I S+ N A+D + + ++
Sbjct: 414 -YRRHESGQGLIITKIFENSPAFKQGLILDDLIIAINGKSTLNKSAEDLVELTVNQMSSE 472
Query: 686 SLPCVILS-KRESSGD 700
S+ V L +R+ GD
Sbjct: 473 SVTQVTLKLRRKDRGD 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
NEA KRN K+ +R R A+ G++ AI +Q + +P A
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575
Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG + + + + A+ D+ +AI ++P A+ RG LG++ AI D ++ +
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGLIHRELGDNRGAINDYTQVIR 635
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P+ A+ + RG+ + A+ED +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLLLHG-LGQHKKAIKDLS 609
G + +++A+KD +
Sbjct: 579 GWIHSNRFKAYQEALKDYN 597
>gi|17988679|ref|NP_541312.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|17984487|gb|AAL53576.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
str. 16M]
Length = 255
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 46 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 105
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 106 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 165 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 224
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 225 DKAKAANSYARAVQLDPKYKPA 246
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 26 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 85
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 86 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 121
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 122 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 166
>gi|428301371|ref|YP_007139677.1| hypothetical protein Cal6303_4807 [Calothrix sp. PCC 6303]
gi|428237915|gb|AFZ03705.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 280
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++ G ++AI+ ++Q LK DP +A RG A Q AAISD+ AI +NP
Sbjct: 99 RGLVHLDMGNKSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG RAA G+ AI D S+A+ P A + RG D N A+ D
Sbjct: 159 NYAEAYNNRGNTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADY 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + ++ +AY G A ++G+ A KA QL
Sbjct: 219 NQAILINPNFAAAYNNRGNAYIALGDKPSAIADFQKAAQL 258
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T S + S + DF L RG ++G A++ +++ + +P YP RG
Sbjct: 50 TTSSTNPSTARDFYL-RGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGN 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AAI+D+ +A++ +P+ +A+ RG AA G AI D + A+ PN A+ + RG
Sbjct: 109 KSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D N A+ D S + L+ + A+ G A ++ G+ A + +AI ++ NF
Sbjct: 169 NTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNF 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQV 577
A+ + Y L + A+ Q+
Sbjct: 229 AAAYNNRGNAYIALGDKPSAIADFQKA 255
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G +AIS ++ + +P Y EA RG RA Q + AI+D+++AI N
Sbjct: 132 NRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAAQGDRNGAINDYSQAIALN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG ARAA G+ AI D ++A+ PN A + RG D +A+ D
Sbjct: 192 PKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNFAAAYNNRGNAYIALGDKPSAIAD 251
Query: 506 LSACVKLDKENKS 518
+L +E K+
Sbjct: 252 FQKAAQLFQEQKN 264
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+NPS + RGQ + G+ A+ ++A+ PN + +ERG+V+ + +AA+
Sbjct: 54 TNPSTARDFYLRGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGNKSAAI 113
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +KLD N AY G ++ G A + AI + N+ EA+ +
Sbjct: 114 ADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAA 173
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ Q + ++ +++ A++ RG G AI D +
Sbjct: 174 QGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYN 219
>gi|425444768|ref|ZP_18824811.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
gi|389735431|emb|CCI01072.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
Length = 707
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%), Gaps = 3/220 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W + L +ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+A++ +G++L LG+ +A++ + ++
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATK 565
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G + + + +A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSWYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E Q + + +A+ +G+LLH + + K+AI R
Sbjct: 558 EAFTQATKANSNYYQAWLNQGILLHQMERFKEAIASYEKARR 599
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLS------SGSRTMMPHLIWNLTRWRNL 629
G LGQ+++AI+ S R + TRW+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQEL 689
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ + + + F T+ +K+
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++GI ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705
>gi|334118012|ref|ZP_08492102.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
gi|333459997|gb|EGK88607.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
Length = 699
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ FD LK P Y A GRG + E AI+ + +A++ + AW RGQA
Sbjct: 421 AIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIASYEKAVEFQSNLYRAWYNRGQAY 480
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A++ KA+E + ++ + + G V + A E V+ + +
Sbjct: 481 QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVNKNQEAFEAYEKAVRFQPKFYQS 540
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL + +++A EA+ KA++L ++ +AW +L Y +L E+A+EC + L
Sbjct: 541 WYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALD 600
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A++ RG + L +++ AI
Sbjct: 601 LNPKEDQAWYNRGNAQYNLKRYEDAI 626
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGE--------------------------- 450
L RG E A++ + AI P E
Sbjct: 337 LYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQSAYDKAIE 396
Query: 451 -------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
AW RG A L +S EAI AL+ +P+ A RG V + + A+
Sbjct: 397 LKPEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAI 456
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
V+ A+ G A + +Y +A E++ KA+++ + EAW +L + +
Sbjct: 457 ASYEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLE 516
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +++A E ++ + +F ++++ +G+ L + +H++A++
Sbjct: 517 VNKNQEAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVE 559
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ L +VN+ + A +++ ++ P + ++ +G A R E A+ + +A+
Sbjct: 508 YNLGNVFLEVNKNQ--EAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAV 565
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +AW G + L + +AI+ ++AL+ P + RG + K + A
Sbjct: 566 KLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLNPKEDQAWYNRGNAQYNLKRYEDA 625
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + V + ++ A+ G AL +I Y+ A ++ KAI+ ++
Sbjct: 626 IASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAIASYDKAIRYKPDY 673
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + ++ A+ +++ +K P Y +A G + R+ E AI + A+ N
Sbjct: 543 SKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLN 602
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A+ L +AI ++A+ + + ++ + RG K + A+
Sbjct: 603 PKEDQAWYNRGNAQYNLKRYEDAIASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAIAS 662
Query: 506 LSACVKLDKENKSA 519
++ + ++A
Sbjct: 663 YDKAIRYKPDYRAA 676
>gi|428204802|ref|YP_007100428.1| hypothetical protein Chro_5686 [Chroococcidiopsis thermalis PCC
7203]
gi|428012921|gb|AFY91037.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 243
Score = 86.7 bits (213), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 83/165 (50%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L RG + + + + AI DF ++ NPS EA+ RG RA LG A+ D + A
Sbjct: 47 QELFNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSA 106
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L P+ AD ++RG V + +F+ A+ D +A ++ D AY GLA S IG +
Sbjct: 107 LRINPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQA 166
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A + +AI+L + EA+G+ L + A+ LQQ I
Sbjct: 167 AIADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQI 211
Score = 85.9 bits (211), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 76/152 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + G + AI FD +++ +P + EA RG RA +AA++DF A++
Sbjct: 50 FNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRI 109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ +RG A G EAI D + AL ++ N AD + RG+ + + AA+
Sbjct: 110 NPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIA 169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D ++L + AY G +G+ A
Sbjct: 170 DYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGA 201
Score = 72.4 bits (176), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 67/127 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y +A++ F+ L+ +P + +A RGT A + AI+DF A++ +
Sbjct: 85 NRGFVRAELGNYKAAMADFNSALRINPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYD 144
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A + +G + AI D +A+ +P+ A+ RG V + D + A+ D
Sbjct: 145 VNFADAYYNRGLAHSGIGNAQAAIADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIAD 204
Query: 506 LSACVKL 512
L ++
Sbjct: 205 LQQAAQI 211
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + G+ AI+D + P+ + RG V + ++ AA+ D ++ ++++
Sbjct: 52 RGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRINP 111
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G L+ G + +A A++ D NF +A+ + + + N++ A+
Sbjct: 112 HHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIADY 171
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + + ++AY RG + + LG AI DL ++
Sbjct: 172 DRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQ 210
>gi|268323937|emb|CBH37525.1| conserved hypothetical protein, tetratricopeptide repeat family
[uncultured archaeon]
Length = 529
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S +V+ L +G + KY A+ +++ + +P + +A G+G A + E A+
Sbjct: 8 SKTVEKWLEKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEA 67
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AI NP EAW +G A L A+ KA+E P+ A++ + +G + K
Sbjct: 68 YEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNALYGLK 127
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ ++++ + A+ G AL + Y+ A +A+ KA++++ F E W +
Sbjct: 128 RYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEINPLFPEVWNNK 187
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI----KDLSSGSR 613
L E+AL + + I+ ++ A++ +G+ L L ++++A+ K + G
Sbjct: 188 GYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTAYEKAIEKGPE 247
Query: 614 TMMPH 618
+ P+
Sbjct: 248 DVRPY 252
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 9/267 (3%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KRN+ + K+ I+ DF + +G A + ++ +A++ F++ ++ +P + E
Sbjct: 59 KRNED-ALEAYEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWN 117
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
G+G A + E A++ F +AI+ NP EAW +G A L +A++ KALE
Sbjct: 118 GKGNALYGLKRYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEIN 177
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P ++ + +G + K + A+ ++++ E +A+ G+AL ++ Y++A A
Sbjct: 178 PLFPEVWNNKGYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTA 237
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ KAI+ + + + + Y +L + + A E ++ L DK F+ A L+G +
Sbjct: 238 YEKAIEKGPEDVRPYSNSGELYFNLGDLKSASEKMEGALTKDKTFASALMLKGEIEIEKK 297
Query: 600 QHKKAIKDLSSGSRT----MMPHLIWN 622
A K + R+ +MPHL WN
Sbjct: 298 DWDSANKSFEAAIRSDLGNLMPHL-WN 323
>gi|427735315|ref|YP_007054859.1| hypothetical protein Riv7116_1767 [Rivularia sp. PCC 7116]
gi|427370356|gb|AFY54312.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 225
Score = 86.7 bits (213), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 90/172 (52%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K I++ + ++G+ Q+ +G + AI FD +++ +P + E RG A++ AA++
Sbjct: 34 KQINLQQQFNQGVQQLKQGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVT 93
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DF +AI+ NP+ +A+ RG A LG + AI D K ++ +P D + G+ N++
Sbjct: 94 DFNQAIRLNPNHADAYHSRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQ 153
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
A+ +L+ +KL+ AY GLA ++G + A KA L R
Sbjct: 154 GHHKQAITNLNKALKLNPNLAEAYGNRGLAEYALGNKRSAVADLQKAASLFR 205
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 74/149 (49%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + AI DF +Q+NP E + RG A++ LG A+ D ++A+ PN AD H
Sbjct: 51 QGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYH 110
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG V + +A+ D +K+D + AY LGL G +K+A KA++L+
Sbjct: 111 SRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLN 170
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
N EA+G+ L N A+ LQ+
Sbjct: 171 PNLAEAYGNRGLAEYALGNKRSAVADLQK 199
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G Y +A++ F+Q ++ +P + +A RG A +AI+DF + I+ +P
Sbjct: 78 RGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHSRGNVYAILGNNPSAIADFKKTIKIDP 137
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ G G +AI +L+KAL+ PN A+ RG+ + + +AV DL
Sbjct: 138 KFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNPNLAEAYGNRGLAEYALGNKRSAVADL 197
Query: 507 SACVKLDKENKSAYTY 522
L ++ Y
Sbjct: 198 QKAASLFRQEGDNQNY 213
Score = 60.8 bits (146), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K +F A+ED V+ + + GLA S +G Y+ A +AI+L+ N +A
Sbjct: 49 LKQGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADA 108
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ Y L N+ A+ ++ + ID +F+ AY+ GL + G HK+AI +L+ +
Sbjct: 109 YHSRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALK 168
Query: 614 TMMPHL 619
+ P+L
Sbjct: 169 -LNPNL 173
>gi|189184738|ref|YP_001938523.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
gi|189181509|dbj|BAG41289.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
Length = 379
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI++ + +K P + EA I +G + E A+ +F AI+ N S EA+
Sbjct: 122 GKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYN 181
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EAI+ A+++ PN ++ H +G+ F A+E +K D
Sbjct: 182 KGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDP 241
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G L+ + Y +A E+ AI++D N +A+ ++ L ++A++
Sbjct: 242 NDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNY 301
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + F K Y +G+ L LGQ+ A
Sbjct: 302 DIAIKYNPNFDKNYLEKGISLVNLGQYSSA 331
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + GK A+ F+ +K DP + A + + + E AI+ AI+
Sbjct: 79 SKGIALDDLGKPLEAVENFNLAIKYDPSFVGAYNNKAMSYRKLGKNEEAITLCNLAIKYK 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ +G + LG EA+++ A+ + + + + +GI A+E
Sbjct: 139 PNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYNKGIALMNLGSIQEAIES 198
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K AY GL L+ +G+++ A E AI+ D N L+A+ + L
Sbjct: 199 CDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYVLNLLK 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+E + ID + AY L+G++ LG+H++AIK+
Sbjct: 259 RYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKN 300
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G AI D +K P Y EA +G A + + AI F AI+ +
Sbjct: 181 NKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYD 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ +G L EA++ + A+E +PN AD +G+V K A+++
Sbjct: 241 PNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKN 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+K + Y G++L ++G+Y A+E L AI+ + N +
Sbjct: 301 YDIAIKYNPNFDKNYLEKGISLVNLGQYSSAKENFLLAIKYNPNII 346
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G + + G+Y A+ FD ++ + YPEA +G A ++ AI AI+
Sbjct: 146 INKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYNKGIALMNLGSIQEAIESCDIAIKY 205
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ EA+ +G A LG+ AI+ A++++PN + +G V K + A+E
Sbjct: 206 RPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYVLNLLKRYAEAME 265
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ----LDRNFLE 552
+ +++D AY G+ +G++++A + + AI+ D+N+LE
Sbjct: 266 SCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNYDIAIKYNPNFDKNYLE 317
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 93/178 (52%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI +F AI+ +PS ++ +G A LG+ +EA+++ + A++++P+ +
Sbjct: 54 KKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEAVENFNLAIKYDPSFVGAYNN 113
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + K A+ + +K AY G +L+ +G Y++A E AI+ +
Sbjct: 114 KAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNS 173
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ EA+ + +L + ++A+E + +S+AYH +GL L LGQ + AI+
Sbjct: 174 SYPEAYYNKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIE 231
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 484 DILHERGIVN----------FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
D++ +R I+ K K + A+E+ +K D S+Y G+AL +G+
Sbjct: 31 DLIQDRAILAKEYFNIGSSFLKLKKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKP 90
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A E AI+ D +F+ A+ + Y+ L +E+A+ + FS+AY +G
Sbjct: 91 LEAVENFNLAIKYDPSFVGAYNNKAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGA 150
Query: 594 LLHGLGQHKKAIKDLSSGSR--TMMPHLIWN 622
L+ LG++++A+++ R + P +N
Sbjct: 151 SLNDLGRYEEAMENFDVAIRYNSSYPEAYYN 181
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + AI D LA Y+ D+ N+ + + L+ + + C+ A+++DP
Sbjct: 220 LAILGQFQNAIEHFD--LAIKYDPNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNC 277
Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADL-KQFLE 145
AY LKG F LG+ +EA+ K Y+ A+ + + K +LE
Sbjct: 278 ADAYCLKGMVFEKLGKHQEAI----KNYDIAIKYNPNFDKNYLE 317
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARI----ELAK-LCSLRNWSKAIRILDSLLAQS 66
+L K + I D ++ D AS+ ++ +L K L ++ N++ AI+ D +
Sbjct: 52 KLKKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEAVENFNLAIK-YDPSFVGA 110
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y +L ++ I C+ A++ P +AYI KG + + LGR EEA+ +
Sbjct: 111 YN-----NKAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENF 165
Query: 127 E 127
+
Sbjct: 166 D 166
>gi|374815102|ref|ZP_09718839.1| chaperone protein DnaJ [Treponema primitia ZAS-1]
Length = 489
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N + +A++ + ++ +P Y A + RG +++ + AI+D+TEAI+ +
Sbjct: 225 ARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLD 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG A + AI D + A+ +PN A+ RGIV +D++ A+ D
Sbjct: 285 PNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIAD 344
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + SAY+ + + +Y A + +AI+LD N+ + + Y
Sbjct: 345 FTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQ 404
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + A+ + + + ++ AY+ RG + AI D + R
Sbjct: 405 DYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIR 452
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ ++RG+ + Y AI+ + + +K DP Y RG A +++ + AI+D+T
Sbjct: 254 VNAYVARGVVYERKQDYDHAIADYTEAIKLDPNYAGTYFNRGNAYEGKQDYDHAIADYTM 313
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P+ RG + AI D ++A+ +P+ R + K +D++
Sbjct: 314 AIRLDPNYANTHVVRGIVYGYKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYD 373
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + ++LD Y G+A +Y A + +AI+L ++ +A+ +
Sbjct: 374 HAIADYTEAIRLDPNYAGTYFNRGIAYGYKQDYDHAIADYTEAIRLKPDYTDAYNNRGGA 433
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y + + A+ + + + ++ AY+ RG + G A D +
Sbjct: 434 YGYKQDYDHAIADFTEAIRLKPDYTDAYNNRGNVYKAKGAQSLAAADYA 482
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI + Y AI+ F + ++ P Y A R +++ + AI+D+TEAI+
Sbjct: 326 VVRGIVYGYKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRL 385
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + RG A + AI D ++A+ +P+ D + RG +D++ A+
Sbjct: 386 DPNYAGTYFNRGIAYGYKQDYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIA 445
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + ++L + AY G + G A + A QL
Sbjct: 446 DFTEAIRLKPDYTDAYNNRGNVYKAKGAQSLAAADYAMAKQL 487
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 22 EIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEIQDICNRA 76
EI E +R++ +A AR + + ++ ++++AI+ LD A +Y NR
Sbjct: 242 EISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIK-LDPNYAGTY-----FNRG 295
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
Y + + H I D A++LDP ++++G + +++ Y+HA+
Sbjct: 296 NAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYG-----------YKQDYDHAI-- 342
Query: 137 SADLKQFLELEELLTAAKQDRSVT 160
AD + + L+ T+A +R+VT
Sbjct: 343 -ADFTEAIRLKPDYTSAYSNRAVT 365
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 62/133 (46%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A I + RG + K+++ A+ ++S ++++ +AY G+ +Y A +
Sbjct: 218 NDAKIHYARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADY 277
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+LD N+ + + Y+ + + A+ + +D ++ + +RG++
Sbjct: 278 TEAIKLDPNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQD 337
Query: 601 HKKAIKDLSSGSR 613
+ AI D + R
Sbjct: 338 YDHAIADFTEAIR 350
>gi|225619120|ref|YP_002720346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225213939|gb|ACN82673.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 357
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F +++ +P Y A G + E AI+ +
Sbjct: 37 SVELYNNRGLAKSSLGMYEEAIDDFQKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ Y +A + K ++LD + A+ ++
Sbjct: 156 EEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
QDL +ALE + L +DK +SKAY+ RG
Sbjct: 216 IKQDLKLHNEALEYFNRALLLDKNYSKAYYNRG 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ F++ L D Y +A RG + E A++DF ++ P+ A+ +RG+ +
Sbjct: 226 ALEYFNRALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYYPAYCKRGEVK 285
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
L EA++D +K +E+ + I RG +K KD+N A++D + C
Sbjct: 286 LKLKNYEEAVEDFNKYIEYGNPDSKIYFYRGYAEYKLKDYNNALKDFNMC 335
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI F + I+ +
Sbjct: 113 GLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDH 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L EA+ +K LE + + + GI+ K N A+E +
Sbjct: 172 YIKAYYNIGLSKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGIIKQDLKLHNEALEYFN 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ LDK AY GL+L + Y+ A ++L+ N+ A+ + L N
Sbjct: 232 RALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYYPAYCKRGEVKLKLKNY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+E + + SK Y RG + L + A+KD +
Sbjct: 292 EEAVEDFNKYIEYGNPDSKIYFYRGYAEYKLKDYNNALKDFN 333
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
NS D L E F D+ ++E + ++ Y GLA SS+G Y++A +
Sbjct: 2 NSIDNLLELANKAFNSADYKKSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDF 61
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I ++ +++ A+ ++ +L E+A+ ++ L ID +A + GL H LG
Sbjct: 62 QKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGM 121
Query: 601 HKKAIK 606
+++AIK
Sbjct: 122 YEEAIK 127
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 40/175 (22%)
Query: 471 DLSKALEF-------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
D K+LE+ +S ++ + RG+ + A++D + ++ +AY +
Sbjct: 19 DYKKSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDFQKVIHINPHYVNAYNNI 78
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY--------- 561
GL ++G Y++A + KA+ +D N ++A ++ ++Y
Sbjct: 79 GLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPN 138
Query: 562 -----------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
DL E+A+E +V+ +D + KAY+ GL + L + +A+
Sbjct: 139 VHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEAL 193
>gi|257061342|ref|YP_003139230.1| hypothetical protein Cyan8802_3576 [Cyanothece sp. PCC 8802]
gi|256591508|gb|ACV02395.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 261
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G Y AI+ F Q ++ P P++ RG A +++ A++D+ AIQ N
Sbjct: 40 NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 99
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A + + +A+ D S+A++ PN AD RG + AA+ D
Sbjct: 100 PQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIAD 159
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ AY LA + +A + K++QLD NF +A+ + +TQF
Sbjct: 160 YTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQF--K 217
Query: 564 LANSEKALECLQQV 577
L N +A+ LQ+
Sbjct: 218 LGNESEAIADLQKA 231
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 415 PEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P +G +G + + AI+DFT+AIQ P +++ RG A +G+ +A+ D
Sbjct: 32 PSNAVGWYNQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALAD 91
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ A++ P A R ++ KD+ A+ D S +KL+ Y Y G A +G
Sbjct: 92 YNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLG 151
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ A + +AI+L+ N+ +A+ + Y +A+ + + +D F+ AY+ R
Sbjct: 152 NHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNR 211
Query: 592 GLLLHGLGQHKKAIKDLSSGSR 613
G+ LG +AI DL S+
Sbjct: 212 GITQFKLGNESEAIADLQKASQ 233
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A GK A++ ++ ++ +P + A R A ++ + A+SD +EA
Sbjct: 70 DSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEA 129
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ + + RG A+ LG AI D ++A+ N A + R + + +
Sbjct: 130 IKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPE 189
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + V+LD AY G+ +G +A KA QL + G+ T
Sbjct: 190 AIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKASQL----FKTQGNTTY-- 243
Query: 562 QDLANSEKALECLQQV 577
S+KA + LQ++
Sbjct: 244 -----SQKANDTLQKL 254
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AIR L+S A++Y NRA Y++ +L I D K++QLDP AY
Sbjct: 155 AAIADYTEAIR-LNSNYAKAY-----YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAY 208
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
+G LG + EA++ +K
Sbjct: 209 YNRGITQFKLGNESEAIADLQKA 231
>gi|116619265|ref|YP_821421.1| hypothetical protein Acid_0121 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222427|gb|ABJ81136.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 608
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGIA+ + KY AI FD + P + E + R A + A +D EA++
Sbjct: 176 LGRGIARAEQRKYRDAIEDFDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKL 235
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ AW+ RG R L + A+ D ++AL+ + + R V + K F ++E
Sbjct: 236 NPNDTRAWRVRGAVRERLSDDAGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLE 295
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V+LD +N Y G + +G+++K E KAI L W + L
Sbjct: 296 DRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLL 355
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++AL L+Q +D + LR L
Sbjct: 356 GRWDEALRDLEQATKLDPNNADTRQLRAL 384
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD R A ++ A F Q ++ PE +GRG ARA QR+ AI DF
Sbjct: 138 VDVYSGRAKAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIEDFDS 197
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P E W R A L + A DL++AL+ PN RG V + D
Sbjct: 198 CIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLSDDA 257
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV D + +K D ++ Y + +++++ E +A+QLD E +
Sbjct: 258 GAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGS 317
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Y L EK LE + + + + + RG LG+ +A++DL ++
Sbjct: 318 YHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLLGRWDEALRDLEQATK 370
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 3/239 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K KS + RG + G+ A AI+ + L DP EAL RG +
Sbjct: 29 TKPDKKKSQAA---WQRGKKADDAGQRAEAIAAYSDALAADPSNTEALRARGKDYQADGD 85
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A +DF AI+ P+ E + R AA G+ AI D + A+ + D+ R
Sbjct: 86 RAKAQADFDRAIELQPARAEGYVVRAGFFAATGQPERAIHDYTLAINLKMEHVDVYSGRA 145
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++F+ A ED + ++L +N Y G+A + +Y+ A E I +
Sbjct: 146 KAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIEDFDSCIGRKPDH 205
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E W + L + A L + L ++ ++A+ +RG + L A+ D +
Sbjct: 206 EECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLSDDAGAVADYT 264
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 34/256 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G A A + FD+ ++ P E + R A + E AI D+T AI
Sbjct: 75 ARGKDYQADGDRAKAQADFDRAIELQPARAEGYVVRAGFFAATGQPERAIHDYTLAINLK 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + R +A A E +A +D ++A+ ++ + RGI + + + A+ED
Sbjct: 135 MEHVDVYSGRAKAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIED 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------- 554
+C+ +++ + LA + + +Y A+ +A++L+ N AW
Sbjct: 195 FDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLS 254
Query: 555 ---GHLTQF--------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
G + + Y + E++LE Q + +D + + Y R
Sbjct: 255 DDAGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVAR 314
Query: 592 GLLLHGLGQHKKAIKD 607
G H LGQH+K ++D
Sbjct: 315 GGSYHLLGQHEKGLED 330
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R V K+ ++ +Q ++ DP PE + RG + + E + D T+AI
Sbjct: 278 MARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGL 337
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P + W RG A LG EA++DL +A + +PN+AD R +
Sbjct: 338 QPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNADTRQLRALAQ 386
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A A++ + + LK D + R ++ E ++ D +A+Q +P E + RG
Sbjct: 257 AGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGG 316
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+ LG+ + ++D +KA+ +P SA RG F ++ A+ DL KLD N
Sbjct: 317 SYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNA 376
Query: 518 SAYTYLGLALSSIGEYKKAEEA 539
LA + + E K E A
Sbjct: 377 DTRQLRALAQAHVDEKVKEERA 398
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + E +A AI Q +K DP A RG A ++ + +++DF +AI+ NP
Sbjct: 511 GRKHIQEEHFAQAIGPLTQAIKLDPSLATAFNARGYAYFRLKKFKESLADFDQAIKLNPL 570
Query: 448 AGEAWKRRGQAR 459
A+ RG AR
Sbjct: 571 YANAYTNRGSAR 582
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 34/177 (19%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ +++A+ ++PS EA + RG+ A G+ +A D +A+E +P A+ R
Sbjct: 55 AIAAYSDALAADPSNTEALRARGKDYQADGDRAKAQADFDRAIELQPARAEGYVVRAGFF 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
A+ D + + L E+ Y+ A ++ E+ KAEE +AI+L
Sbjct: 115 AATGQPERAIHDYTLAINLKMEHVDVYSGRAKAYTATREFDKAEEDFTQAIRLR------ 168
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L N E Y RG+ +++ AI+D S
Sbjct: 169 ----------LDNPEP------------------YLGRGIARAEQRKYRDAIEDFDS 197
>gi|218247323|ref|YP_002372694.1| hypothetical protein PCC8801_2530 [Cyanothece sp. PCC 8801]
gi|218167801|gb|ACK66538.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 260
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G Y AI+ F Q ++ P P++ RG A +++ A++D+ AIQ N
Sbjct: 39 NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 98
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A + + +A+ D S+A++ PN AD RG + AA+ D
Sbjct: 99 PQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIAD 158
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ AY LA + +A + K++QLD NF +A+ + +TQF
Sbjct: 159 YTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQF--K 216
Query: 564 LANSEKALECLQQV 577
L N +A+ LQ+
Sbjct: 217 LGNESEAIADLQKA 230
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 415 PEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P +G +G + + AI+DFT+AIQ P +++ RG A +G+ +A+ D
Sbjct: 31 PSNAVGWYNQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALAD 90
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ A++ P A R ++ KD+ A+ D S +KL+ Y Y G A +G
Sbjct: 91 YNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLG 150
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ A + +AI+L+ N+ +A+ + Y +A+ + + +D F+ AY+ R
Sbjct: 151 NHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNR 210
Query: 592 GLLLHGLGQHKKAIKDLSSGSR 613
G+ LG +AI DL S+
Sbjct: 211 GITQFKLGNESEAIADLQKASQ 232
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A GK A++ ++ ++ +P + A R A ++ + A+SD +EA
Sbjct: 69 DSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ + + RG A+ LG AI D ++A+ N A + R + + +
Sbjct: 129 IKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPE 188
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + V+LD AY G+ +G +A KA QL + G+ T
Sbjct: 189 AIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKASQL----FKTQGNTTY-- 242
Query: 562 QDLANSEKALECLQQV 577
S+KA + LQ++
Sbjct: 243 -----SQKANDTLQKL 253
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AIR L+S A++Y NRA Y++ +L I D K++QLDP AY
Sbjct: 154 AAIADYTEAIR-LNSNYAKAY-----YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAY 207
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
+G LG + EA++ +K
Sbjct: 208 YNRGITQFKLGNESEAIADLQKA 230
>gi|427716097|ref|YP_007064091.1| hypothetical protein Cal7507_0771 [Calothrix sp. PCC 7507]
gi|427348533|gb|AFY31257.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 420
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + YA AI F Q L+ P +PEA + RG A + A+SD+TE ++ N
Sbjct: 7 NRGLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEVLRLN 66
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R AR AL A++D+ + + PN A + RGIV K + A+ +
Sbjct: 67 PEFVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHIHDAIAN 126
Query: 506 LSACVKL-----DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-HLTQ 559
+L DKEN L L SI E + E+ ++ + + + TQ
Sbjct: 127 FKKAAELYLVQKDKEN------CRLCLESIKELQPPEKPAVQQASSPSVTIRSTNEYFTQ 180
Query: 560 FYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ ++++A+ L VL D + ++AY RG++ +G +++AI D +
Sbjct: 181 LLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCKMGSYREAIADFNQA 234
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 20/262 (7%)
Query: 373 ISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+ ++ S SV R ++ + + +G AI+ + +L+ DP +A RG R
Sbjct: 161 VQQASSPSVTIRSTNEYFTQLLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCK 220
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
AI+DF +A+ N ++ RG+AR+ LG+ AI D ++AL+ +P A +
Sbjct: 221 MGSYREAIADFNQALHLNFQDAIVYRNRGKARSFLGDHQGAIADFNQALQIQPQDALVYV 280
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + ++ +A++D + ++++ + AY G+ + + E ++A E + +A +
Sbjct: 281 ARGNAHRAGGNYLSAIQDYTKALQINAHDAQAYYNRGITYTLLEEMQQAVEDYQRAGSI- 339
Query: 548 RNFLEA--WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
F E W + YQ + NS LE +Q+ + + R K LR LL +G +
Sbjct: 340 --FCEQEDWEN----YQQVLNS---LEKIQKSI-PESRNQKYNLLRQKLLRLVGGQWEIA 389
Query: 606 KDLSSGSRTMMPHLI--WNLTR 625
+ L + P ++ W L +
Sbjct: 390 QRLIQQKKDYYPGMLEEWYLQK 411
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ K KD+ A+E+ S ++L AY GLA G +A + + ++
Sbjct: 5 FYNRGLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEVLR 64
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ F+EA+ L N ALE + + + ++ ++ AY+LRG++ G AI
Sbjct: 65 LNPEFVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHIHDAI 124
Query: 606 KDLSSGSRTMM 616
+ + +
Sbjct: 125 ANFKKAAELYL 135
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E + RG +A + AI++ S+AL+ P + +RG+ + + AV D +
Sbjct: 3 EEFYNRGLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEV 62
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------GHLTQ 559
++L+ E AY LA ++ A E + I+L+ N+ A+ GH+
Sbjct: 63 LRLNPEFVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHI-- 120
Query: 560 FYQDLANSEKALE 572
+ +AN +KA E
Sbjct: 121 -HDAIANFKKAAE 132
>gi|261220776|ref|ZP_05935057.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261312977|ref|ZP_05952174.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261318373|ref|ZP_05957570.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261757156|ref|ZP_06000865.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|265986173|ref|ZP_06098730.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995868|ref|ZP_06108425.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|340792731|ref|YP_004758195.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
gi|260919360|gb|EEX86013.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261297596|gb|EEY01093.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261302003|gb|EEY05500.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261737140|gb|EEY25136.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|262550165|gb|EEZ06326.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|264658370|gb|EEZ28631.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|340561190|gb|AEK56427.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
Length = 295
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARTVQLDPKYKPA 286
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 206
>gi|296126399|ref|YP_003633651.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 376
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG++Q+ G+ AI FD+ ++ DP YP+ + RG ++ ++ E A+ DF +AI+
Sbjct: 208 LYRGVSQLVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIEL 267
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + +A+ RG ++ L + EAI+D K +E PN D + RG+ + +E
Sbjct: 268 DSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIE 327
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D +L+ +N Y G S+ K EEA LK Q
Sbjct: 328 DFDKIAELNPDNSFVYFVRGNIKKSLN---KDEEA-LKDFQ 364
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 22/244 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEA----------------------LIGRGTA 424
RG + + Y AI + + L+ +P Y EA G
Sbjct: 120 RGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYYIEGVN 179
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+++ E A+ +AI+ +P+ +A+ RG ++ +G + EAI+D KA+E +PN
Sbjct: 180 YYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPK 239
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG K + AV+D ++LD AY Y G++ + +Y++A + K I
Sbjct: 240 FYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTI 299
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ N+++A+ H L +++ +E ++ ++ S Y +RG + L + ++A
Sbjct: 300 ELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGNIKKSLNKDEEA 359
Query: 605 IKDL 608
+KD
Sbjct: 360 LKDF 363
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 29/196 (14%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPN----------------------SADILH 487
E +K RG L EAI+D KALE PN S D +
Sbjct: 115 ELYKHRGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYY 174
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G+ + K F A++ L+ ++LD AY Y G++ +G ++A + KAI+LD
Sbjct: 175 IEGVNYYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELD 234
Query: 548 RNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
N+ + + GH L E+A++ + + +D ++KAY RG+ GL ++++A
Sbjct: 235 PNYPKFYLYRGHSKNL---LKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEA 291
Query: 605 IKDLSSGSRTMMPHLI 620
IKD + + P+ I
Sbjct: 292 IKDFDK-TIELNPNYI 306
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D F L RG ++ KY A+ FD+ ++ D Y +A + RG ++ +
Sbjct: 229 KAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKY 288
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI DF + I+ NP+ +A+ RG ++ L ++ E I+D K E P+++ + RG
Sbjct: 289 EEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGN 348
Query: 492 VNFKFKDFNAAVEDLSACVKLDKEN 516
+ A++D +L+K+N
Sbjct: 349 IKKSLNKDEEALKDFQKYEELEKQN 373
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG++++ KY AI FD+ ++ +P Y +A RG ++ + + I DF + +
Sbjct: 276 MYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAEL 335
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
NP + RG + +L + EA++D K E E ++ I
Sbjct: 336 NPDNSFVYFVRGNIKKSLNKDEEALKDFQKYEELEKQNSQI 376
>gi|307150150|ref|YP_003885534.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
gi|306980378|gb|ADN12259.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
Length = 912
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + Y +++ + ++ +P Y EA RG ++ + AI+D+ +AI+ P
Sbjct: 661 RGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYRELQDYQKAITDYNKAIEIQP 720
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG A L E +A D SK+LE + N+ D GI K++ ++ L
Sbjct: 721 DWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNNPDAYLGLGIFYIAQKNYEKGMDYL 780
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++L + AY G + +Y+KA + KA+++ +N EA+ Y L +
Sbjct: 781 SKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSKALEIQQNNAEAYAERGAAYIYLKD 840
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
KA+ L + + ++ ++ AY RG + L + +KA DL ++
Sbjct: 841 YPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQKAQGDLQKAAQ 887
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y+ A+ Q+L P RG Q++ + ++ D ++AI+ NP+ EA+ RG
Sbjct: 637 YSEALKTVTQMLALKENNPNGYFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRG 696
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L + +AI D +KA+E +P+ + + RG ++ A D S +++ + N
Sbjct: 697 GVYRELQDYQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNN 756
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY LG+ + Y+K + K ++L ++ EA+ + Y L +KA+ +
Sbjct: 757 PDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSK 816
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L I + ++AY RG L + KAI DLS
Sbjct: 817 ALEIQQNNAEAYAERGAAYIYLKDYPKAITDLS 849
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF-QRELEAA 434
+K+ S+D+ L G+ + K A+ D+ + P + A +G A AF +++ E A
Sbjct: 514 AKANSLDW-LIYGLEVLRLNKPQEALKAIDKAISLKPDFDLAYYAKGLALAFTEQKFEQA 572
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ F +A Q NP +AW+ + + A L E++ + ++++ P + R V F
Sbjct: 573 LVQFDKATQLNPQLEQAWRWKSISLANLDRHSESLAAIDQSIKLRPKDILLYQFRLFVLF 632
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++++ A++ ++ + L + N + Y + GL +Y+ + + KAI+++ N+ EA+
Sbjct: 633 NLENYSEALKTVTQMLALKENNPNGYFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAY 692
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G Y++L + +KA+ + + I + +AY+ RG L + +KA D S
Sbjct: 693 GIRGGVYRELQDYQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFS 747
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 49/216 (22%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI---QSNPSA----- 448
Y AI+ +++ ++ P + EA GRG+A +E + A +DF++++ Q+NP A
Sbjct: 705 YQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNNPDAYLGLG 764
Query: 449 --------------------------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
EA+ RG+ L + +AI D SKALE + N+
Sbjct: 765 IFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSKALEIQQNN 824
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ ERG KD+ A+ DLS V+L+ AY G + E +KA+ K
Sbjct: 825 AEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQKAQGDLQK 884
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A QL YQ+ N++ E +QQ L
Sbjct: 885 AAQL--------------YQEQGNTQ-MYEKVQQAL 905
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 369 CVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
T SKS I + D L GI + + Y + + L+ P Y EA + RG
Sbjct: 742 AFTDFSKSLEIKQNNPDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIY 801
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+++A++ + EA+ RG A L + +AI DLSKA+E N AD
Sbjct: 802 VGLEQYQKAITDYSKALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADA 861
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
RG V ++ A DL +L +E + Y
Sbjct: 862 YMARGAVYLVLQEAQKAQGDLQKAAQLYQEQGNTQMY 898
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQD 71
L++ +++ ID+ +++ + + L L +L N+S+A++ + +LA +
Sbjct: 600 LDRHSESLAAIDQSIKLRP--KDILLYQFRLFVLFNLENYSEALKTVTQMLALKENNPNG 657
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R Y Q + +++ ++D KA++++P +AY ++G + L ++A++ + K E
Sbjct: 658 YFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYRELQDYQKAITDYNKAIE 717
>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 284
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+A V G+Y A+ F ++L P + A R AR + E A++D+ A+ NP
Sbjct: 1 MASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDF 60
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E++ RG+A +G+ +A+ DL +A+E P+ AD + RG+ K DF A+ D S
Sbjct: 61 PESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSR 120
Query: 509 CVKLDKENKSA--YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + +++A Y G+ G+ KA A+ + F A+ +L + +
Sbjct: 121 AIQM-RPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQ 179
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A+ + L I R ++A RG + G + A+ DL
Sbjct: 180 PDRAMAAYDKALSIFPRMAEALSGRGSVRAQAGDYTGALADL 221
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V ++ +S DF + R A+ + G Y A++ +++ L +P +PE+ GRG A
Sbjct: 12 AVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYNGRGKAF 71
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-SAD 484
+++ A++D A++ P +A+ RG A G+ + A+ D S+A++ P+ +A+
Sbjct: 72 CDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQMRPDRAAE 131
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG+ + D + A+ D +A + + AY L A G+ +A A+ KA+
Sbjct: 132 FYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKAL 191
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ EA + AL L + + + AY+ R + G +KA
Sbjct: 192 SIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRARVYQLTGNREKA 251
Query: 605 I 605
+
Sbjct: 252 L 252
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 24/217 (11%)
Query: 364 RNKKFC--------VTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDP 412
R K FC + + ++ ++ DF + RG+A G + A++ + ++ P
Sbjct: 67 RGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQMRP 126
Query: 413 -MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAI 469
E RG + + + AI+DFT A+ NP G AW A A + G+ A+
Sbjct: 127 DRAAEFYNARGVTWLEKGDPDKAIADFTAALAENP--GFAWAYNNLASAWMEKGQPDRAM 184
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
KAL P A+ L RG V + D+ A+ DL ++ +AY
Sbjct: 185 AAYDKALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRARVYQL 244
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
G +KA +KA+ L N YQDL N
Sbjct: 245 TGNREKALANAVKAVGLFPN--------NPLYQDLLN 273
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ AVE + + L + AY A +G+Y+ A + +A+ ++ +F E++
Sbjct: 9 YDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYNGRG 68
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + D+ +KAL L + + + F+ AY+ RG+ L G A+ D S
Sbjct: 69 KAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHS 119
>gi|443692422|gb|ELT94016.1| hypothetical protein CAPTEDRAFT_222812 [Capitella teleta]
Length = 1941
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
VT+I+ SK++++ G+ N G ++SAI F +LK+ P AL+ RG A A +
Sbjct: 1249 VTKINPSKTVAL---FKHGLHYFNNGNWSSAIEDFTNLLKQKPNDSRALLYRGRAHANLQ 1305
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-- 487
A +D + I +PS +A+ R L +A+QDLS +L + ++IL
Sbjct: 1306 NWNEAAADLSGTIHLDPSNAKAFYFRACLLRKLHPK-KALQDLSVSLMLDDGDSNILAFL 1364
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSIGEYKKAEEAHLKAIQL 546
RGI+ + A+ D A +KLDK+ A+ LGL + + Y +A + AI+
Sbjct: 1365 HRGILYNEICKHEDAIPDFEAVLKLDKDCACAHVNLGLIFMQKMNNYHRAVKKFSAAIKS 1424
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
D +++A+ + YQ + + + AL + + +++ Y RG L+H +G
Sbjct: 1425 DPTYVKAYICRAEAYQKVHDIKNALLDITRAIHLRPDMQHLYMYRGQLVHKIG 1477
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI +F++AI+ NP+ EA+ +R Q GE + A++D S + P+ L + G+
Sbjct: 1208 AIVNFSQAIKINPNDDEAYYQRAQMYEQRGEQLLAMEDFSMVTKINPSKTVALFKHGLHY 1267
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F ++++A+ED + +K + A Y G A +++ + +A I LD + +A
Sbjct: 1268 FNNGNWSSAIEDFTNLLKQKPNDSRALLYRGRAHANLQNWNEAAADLSGTIHLDPSNAKA 1327
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSK--AYHLRGLLLHGLGQHKKAIKDLSS 610
+ + L + +KAL+ L L +D S A+ RG+L + + +H+ AI D +
Sbjct: 1328 FYFRACLLRKL-HPKKALQDLSVSLMLDDGDSNILAFLHRGILYNEICKHEDAIPDFEA 1385
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 36/202 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++ + K A + F++ L DP +A + R +++ AI + +AI+ P
Sbjct: 1643 RGMTRM-KLKQARGVQDFNRALALDPSLFQAYLSRAAFYGLRKQYSKAILNCNQAIKLQP 1701
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSA---------------- 483
+ A+ RG + + A++DL++A+ + N A
Sbjct: 1702 KSIRAYLYRGALKFHIKAYTLAVRDLTQAISIDTRCLLAYFNRAVCYHYSKHSEKALKDY 1761
Query: 484 ------------DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+L RG++ D+ A+ D V+L E+K + LGL +
Sbjct: 1762 GIVLLLGDQLKLKVLINRGLLYSDLNDYTNALHDFLLAVQLCPEDKQIHHTLGLCYHKLD 1821
Query: 532 EYKKAEEAHLKAIQLDRNFLEA 553
+ + A + +A++LD FLEA
Sbjct: 1822 QLEDAVNSFTRALELDPFFLEA 1843
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 28/245 (11%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPE------------------ALIGRGTARAFQR 429
G+ Q+ Y +A F+ ++ +P Y E A RG R +
Sbjct: 1592 GMCQMETRDYLNANEAFNNAIRVNPKYAEVPTVICKSWILELLTSSQAYYRRGMTRMKLK 1651
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + DF A+ +PS +A+ R + +AI + ++A++ +P S R
Sbjct: 1652 QARG-VQDFNRALALDPSLFQAYLSRAAFYGLRKQYSKAILNCNQAIKLQPKSIRAYLYR 1710
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--- 546
G + F K + AV DL+ + +D + Y A+ Y K E LK +
Sbjct: 1711 GALKFHIKAYTLAVRDLTQAISID--TRCLLAYFNRAVCY--HYSKHSEKALKDYGIVLL 1766
Query: 547 --DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
D+ L+ + Y DL + AL + + + +H GL H L Q + A
Sbjct: 1767 LGDQLKLKVLINRGLLYSDLNDYTNALHDFLLAVQLCPEDKQIHHTLGLCYHKLDQLEDA 1826
Query: 605 IKDLS 609
+ +
Sbjct: 1827 VNSFT 1831
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ F +K DP Y +A I R A +++ A+ D T AI P + RG
Sbjct: 1411 YHRAVKKFSAAIKSDPTYVKAYICRAEAYQKVHDIKNALLDITRAIHLRPDMQHLYMYRG 1470
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q +G+ A + A E ++ IV+ K+++ A+ L + K+ K
Sbjct: 1471 QLVHKIGDLDLAAFCVKHASELNSGLGQSPTQQAIVHSFLKNYDKAIGALVSATKV-KPV 1529
Query: 517 KSAYTYLG 524
+ LG
Sbjct: 1530 PPLFLLLG 1537
>gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 1115
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y A + RG A L+ I+ + +A+Q P AW R
Sbjct: 205 QYEQAIASYDKALQLKPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNR 264
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI KAL+ +P+ + + RGI F ++ A+ ++L +
Sbjct: 265 GYALGNLGRWDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPD 324
Query: 516 NKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
A+ + G+ L ++G +++A + KA+++ ++ AW +L +F +D+A+
Sbjct: 325 YHPAWDHRGIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASY 384
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+KAL+ + +A++ RG L L + +AI
Sbjct: 385 DKALQ-------LKPDLHQAWYYRGNTLGNLRRLDEAI 415
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A + AI+ + +A+Q
Sbjct: 263 NRGYALGNLGRWDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLK 322
Query: 446 PSAGEAWKRRGQARA-ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EAI KALE +P+ H RG+ + FN +
Sbjct: 323 PDYHPAWDHRGIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIA 382
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
++L + A+ Y G L ++ +A ++ KA+QL +F EAW H
Sbjct: 383 SYDKALQLKPDLHQAWYYRGNTLGNLRRLDEAIASYDKALQLKPDFPEAWYH 434
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ + + Q G+Y A++ +I ++ P + G ++ E AI+ + +A+Q
Sbjct: 160 IDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTFQQYEQAIASYDKALQL 219
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A LG E I KAL+ +P+ + RG ++ A+
Sbjct: 220 KPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNRGYALGNLGRWDEAIA 279
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD- 563
++L + A+ G+AL ++G + +A ++ KA+QL ++ AW H D
Sbjct: 280 SYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRGIILCDN 339
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L E+A+ ++ L I + A+H RG+ L L + + I
Sbjct: 340 LGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDI 381
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQS 444
+RGIA N G++ AI+ +D+ L+ P Y A RG E AI+ F +A++
Sbjct: 297 NRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRGIILCDNLGRFEEAITSFEKALEI 356
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + L E I KAL+ +P+ + RG + + A+
Sbjct: 357 KPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKPDLHQAWYYRGNTLGNLRRLDEAIA 416
Query: 505 DLSACVKLDKENKSAYTYLGLALSSI----GEYKKAEEAHLKAIQLDR--------NFLE 552
++L + A+ + GLA SS G + E + QL+ N+ +
Sbjct: 417 SYDKALQLKPDFPEAWYHRGLAASSSTASEGYILRVESQFIDTFQLELTDASRQLINYFQ 476
Query: 553 A-----WGHLTQFYQDLANSEKALECLQQ 576
+ +G L F Q NS+K ++ L Q
Sbjct: 477 SLETGDFGDLISFLQQ-PNSDKLIQFLNQ 504
>gi|434385177|ref|YP_007095788.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
gi|428016167|gb|AFY92261.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
Length = 496
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ G+++ +G A++ +++ ++ +P Y A + RG R+ + + A+SDF AI+
Sbjct: 55 LAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRAIEI 114
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG + LG AI+D ++A+ + A + RG ++ D A+
Sbjct: 115 DPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRGALA 174
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD +AY G+ + +G+ + A E + +AI LD N A+ + +L
Sbjct: 175 DYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIKSEL 234
Query: 565 ANSEKALECLQQVLYI-------DKRFSKAYHLRGLLLHGL 598
+ A + + + D R S +Y+ ++ H L
Sbjct: 235 GDRHAASADFDRAILLNPHYASKDYRISVSYYSPIVIFHPL 275
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + G ++ + + A++D+ AIQ NP A RG R+ALG+ A+ D ++A
Sbjct: 52 ERFLAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRA 111
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E +P + RG + ++ + A+ED + + +D + AY G +G+ +
Sbjct: 112 IEIDPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRG 171
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + AI LD N+ A+ +L + + A+E + + +D + AY+ RG +
Sbjct: 172 ALADYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIK 231
Query: 596 HGLGQHKKAIKDL 608
LG A D
Sbjct: 232 SELGDRHAASADF 244
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + QR L A D A + +AG + R+G R AL D ++A++ P
Sbjct: 30 RGAAMSAQRPLLAQKQDRLAAAERFLAAGVSKYRKGDKRGALA-------DYNRAIQLNP 82
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A RG+V D A+ D + +++D + AY G +G + A E +
Sbjct: 83 RYALAHVNRGVVRSALGDRQGALSDFNRAIEIDPKYPQAYNNRGAIKYELGNKRGAIEDY 142
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI +D F +A+ + +L + AL + +D + AY+ RG++ LG
Sbjct: 143 TRAIAIDYKFAQAYYNRGATRYELGDKRGALADYNIAIALDPNYGAAYYSRGVVRAELGD 202
Query: 601 HKKAIKDLS 609
+ AI+D +
Sbjct: 203 KQGAIEDYN 211
>gi|398338140|ref|ZP_10522845.1| hypothetical protein LkmesMB_22907 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 255
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+++ + ++DFR G +VN KYA AI F++ ++ + +A+ RG + E
Sbjct: 59 TRLTEDDN-AIDFR---GWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGE 114
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++D E+I+ NP ++ RG+ L EAI+DL++ +E +PN + L ERG
Sbjct: 115 YKKALTDINESIRLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERG 174
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
V+ + A +D ++LD +N AY G+ L S+
Sbjct: 175 AVSIRMSKLGDAYQDFDKVIQLDPKNPRAYYNRGIILVSV 214
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 70/141 (49%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L + +AI D ++A+ N++ + RG + ++ A+ D++ ++L+
Sbjct: 71 RGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESIRLNP 130
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E +Y G + + Y +A E + I++D N++EA ++ A +
Sbjct: 131 EFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDAYQDF 190
Query: 575 QQVLYIDKRFSKAYHLRGLLL 595
+V+ +D + +AY+ RG++L
Sbjct: 191 DKVIQLDPKNPRAYYNRGIIL 211
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A+ RG + + AI DF EAI+ N + +A RG +GE +A+ D+++++
Sbjct: 67 AIDFRGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESI 126
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
P RG + + + ++ A+EDL+ C+++D A G + + A
Sbjct: 127 RLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDA 186
Query: 537 EEAHLKAIQLD 547
+ K IQLD
Sbjct: 187 YQDFDKVIQLD 197
>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
Length = 707
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K ++V+ ++ GIA + +Y AI + +LK P A + RG A+ ++ A
Sbjct: 121 KVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNLIRAYLNRGLAKFSAQDTSGA 180
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ DF++AI NP + + R + + A+ D+++A++ P+ + R I+ +
Sbjct: 181 LEDFSKAIDVNPYIPDGYVNRSMIQYYKSDFEGALSDINEAIKLRPDESSFYMNRAIIRY 240
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A+ D V ++ N Y G+ + IG+ A E + + L + L
Sbjct: 241 QLDDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGDLDGAIEDFSRVLALREDDLPTL 300
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ Y++ EKAL V F+ Y+ R + LGQ + A D ++ +
Sbjct: 301 YYRAMLYKEKGEFEKALSDFNIVADAYPDFAPVYYNRAEVKQALGQFESAQLDYNTAMKL 360
Query: 615 MM 616
M
Sbjct: 361 EM 362
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F+QI+K P E R + + + A++D EA++ NP +A+ RG
Sbjct: 41 YILAIQYFNQIIKAKPFLAEPYFYRALGKYYLEDFNGALNDCNEALKRNPYLVDAYNLRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L + ++ D + L+ +P + ++L GI + + ++ A+E S +KL
Sbjct: 101 ILYQKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNL 160
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
AY GLA S + A E KAI ++ + + + + Q+Y+ ++ E AL +
Sbjct: 161 IRAYLNRGLAKFSAQDTSGALEDFSKAIDVNPYIPDGYVNRSMIQYYK--SDFEGALSDI 218
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + S Y R ++ + L + A+ D
Sbjct: 219 NEAIKLRPDESSFYMNRAIIRYQLDDLRGAMADF 252
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I+ ++ + +P + A G + + + A+ ++T+AI+ N EA+ RG
Sbjct: 601 YEMIITDLQKVAEINPNFEFAWFNLGYFNSLLKNFDKAVKNYTKAIEENNEFAEAYFNRG 660
Query: 457 QARAALGESVEAIQDLSKALE 477
R G+ E DLSKA E
Sbjct: 661 LIRIYQGKKTEGTLDLSKAGE 681
>gi|158334750|ref|YP_001515922.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158304991|gb|ABW26608.1| serine/threonine protein kinase with TPR repeats [Acaryochloris
marina MBIC11017]
Length = 654
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N V+ +S+S+++ L G + G Y AI+ +D+ + D +A RG A
Sbjct: 347 NNTVSVSPMSRSEAL-----LRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLA 401
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + +AA++D+ +A++ + A+ RG + AL + A++D ++A+ A
Sbjct: 402 QYGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAY 461
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ H RG+ + KD A+ D +++D + + G +G+Y+ A +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAI 521
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+LD +A+ L + + L Q L +D + AY+ RGL + +++A
Sbjct: 522 RLDGKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREA 581
Query: 605 IKDLSSGSR 613
I+D ++ R
Sbjct: 582 IQDYNTAIR 590
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+AQ Y +A++ +DQ LK D + A RG + ++ + A+ D+ +AI+ N
Sbjct: 398 RGLAQYGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNS 457
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG ++ L + A+ D +AL +P D L RG +++ + A+ D
Sbjct: 458 QYAYVYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDF 517
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++LD +N AY A +G++K +A++LD ++A+ + N
Sbjct: 518 DEAIRLDGKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKN 577
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A++ + ++ ++ AY RG +
Sbjct: 578 YREAIQDYNTAIRLEPDYAVAYFNRGFV 605
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ N A+S +DQ L+ DP + L RG + A++DF EAI+ +
Sbjct: 465 NRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLD 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ R A+ LG+ + D +ALE + D + RG+ + K++ A++D
Sbjct: 525 GKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREAIQD 584
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ ++L+ + AY G + + A+ KA L +N
Sbjct: 585 YNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQKAADLYQN 628
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 84/169 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + Y A+ ++Q ++ + Y RG ++ ++L+ A+SD+ +A++ +
Sbjct: 431 NRGLTKHALQDYKGAVEDYNQAIRLNSQYAYVYHNRGVSKYNLKDLQGALSDYDQALRID 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG+ LG+ A+ D +A+ + +A + R K D+ + D
Sbjct: 491 PKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLDGKNAKAYNGRAHAKGKLGDWKGELAD 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++LD + AY GLA + Y++A + + AI+L+ ++ A+
Sbjct: 551 FDQALELDDQLVDAYNSRGLAKYNRKNYREAIQDYNTAIRLEPDYAVAY 599
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD SRG+A+ N Y AI ++ ++ +P Y A RG + Q ++E A +DF +
Sbjct: 562 VDAYNSRGLAKYNRKNYREAIQDYNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQK 621
Query: 441 A 441
A
Sbjct: 622 A 622
>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
Length = 1041
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 380 SVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S D++L ++G + +Y AIS +D L +P E RG A E AIS
Sbjct: 206 SDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISS 265
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ A+ NP+ E W RG A LG EA+ AL PN + + RG
Sbjct: 266 YDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDSLVWSNRGSALDDLN 325
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + LD EN SA+ G AL + +Y++A + +A+ L+ N E W +
Sbjct: 326 RYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRALTLNPNLPECWTNR 385
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHL---RGLLLHGLGQHKKAIKDL 608
+ L E+A+ L + F +AY+ RG L L ++++AI L
Sbjct: 386 GVLLRKLGRYEEAIASFDHALSQNPNFPEAYNAWNSRGGSLADLERYEEAIPCL 439
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G Y A+S FD+ L +P A I RG A + E AI AI+ NP+
Sbjct: 11 GLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIKINPN 70
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDL 506
AW R A +LG EA+ ++ALE +P+ + RG I+ F + A+
Sbjct: 71 NHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCILANAFGHYEEALNCF 130
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + + + G LS + +++A +++ +A+ ++ N + W Q+L
Sbjct: 131 NCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRDQGALLQELNF 190
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ L ++ K ++ +G LL L ++K+AI
Sbjct: 191 YEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAI 229
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++ F+ L + E GT + E A+ ++ A+ NP+ + W+
Sbjct: 121 GHYEEALNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRD 180
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EAI AL + + + +G + + + + A+ + ++
Sbjct: 181 QGALLQELNFYEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINP 240
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ G AL +G Y++A ++ A+ ++ N E W + L E+A+
Sbjct: 241 NVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSF 300
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L I+ S + RG L L ++++AI
Sbjct: 301 DHALLINPNDSLVWSNRGSALDDLNRYEEAI 331
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A+ N + W +G L EAI AL PN +++ RG
Sbjct: 192 EEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGF 251
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+K + A+ + ++ ++ G AL +G Y++A + A+ ++ N
Sbjct: 252 ALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDS 311
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
W + DL E+A+ + L +D + A++ RG L L Q+++AI
Sbjct: 312 LVWSNRGSALDDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDR- 370
Query: 612 SRTMMPHL 619
+ T+ P+L
Sbjct: 371 ALTLNPNL 378
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 16/230 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + +Y AI+ +D+ L +P PE RG E AI+ F A+ NP
Sbjct: 351 RGNALEDLEQYEEAIASWDRALTLNPNLPECWTNRGVLLRKLGRYEEAIASFDHALSQNP 410
Query: 447 SAGEA---WKRRGQARAALGESVEAIQDLSKALEFEPNSA-DILHERGIVNFKFKDFNAA 502
+ EA W RG + A L EAI L +AL N RG+ F + AA
Sbjct: 411 NFPEAYNAWNSRGGSLADLERYEEAIPCLDRALCLTNNQMWSAWLNRGMAFFNLHSYEAA 470
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+++ + ++ + Y I Y K AH + Q +N W + Y+
Sbjct: 471 LQNYNEGLQFLQPKMPGYQ----EGCGILNYFKG-NAHYRHGQKQQNPFPYWRQAKRSYK 525
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ AL+ L + + +R+ + L GLGQ ++A + L G+
Sbjct: 526 E------ALDFLNEP-KLRERYLEVMQNMSRTLFGLGQTQEAEELLREGT 568
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W G + G+ A+ +AL PN+ RG+ + K + A+ L + +K
Sbjct: 7 WFNLGLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIK 66
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANS- 567
++ N A+ AL S+G Y++A + +A++LD + W G + LAN+
Sbjct: 67 INPNNHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCI------LANAF 120
Query: 568 ---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+AL C L + S+ + G +L L +H++A+ S
Sbjct: 121 GHYEEALNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYS 165
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 38 TARIELAKLCSLRNWSKAIRILDSLLA---QSYEIQDICNRAFCYSQLELHKHVIRDCDK 94
T R + A L L + +AI D+ LA Y++ + N+ F +LE +K I D
Sbjct: 177 TWRDQGALLQELNFYEEAIASYDNALALNSDDYKLWN--NQGFLLMRLERYKEAISSYDH 234
Query: 95 ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
AL ++P + + + +G A LGR EEA+S Y++AL
Sbjct: 235 ALLINPNVSEVWSNRGFALWKLGRYEEAIS----SYDYAL 270
>gi|425442756|ref|ZP_18822993.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9717]
gi|389716117|emb|CCH99609.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9717]
Length = 492
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 364 RNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
R +K+ + +K+I ++ F + RGI N+ KY A++ + + ++ D Y A
Sbjct: 317 RQQKYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAY 376
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG Q++ + A++D+++AI+ NP+ A+ RG + L + A+ D SKA++
Sbjct: 377 YNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDI 436
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
PN AD + RG+V + + ++ A+ D + ++++ AY GL ++ +Y
Sbjct: 437 NPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 360 NEAKRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQIL--KEDP 412
N +R +K+ + +K+I ++ SRG + KY A++ +++ + D
Sbjct: 244 NLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDD 303
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE----A 468
++ A RG Q++ + A++D +AI+ N + + RG L E+ E A
Sbjct: 304 VF-SAYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHFYVVRG----ILHENKEKYELA 358
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D SKA+E + N A+ + RG + K ++ A+ D S ++++ AY G S
Sbjct: 359 LADYSKAIELDSNYANAYYNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNRGNLYS 418
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +Y+ A + KAI ++ N+ +A+ + Y +L + AL Q + I+ +++AY
Sbjct: 419 DLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAY 478
Query: 589 HLRGLLLHGLGQH 601
+ RGLL + L ++
Sbjct: 479 YNRGLLYYNLQKY 491
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + ++ KY A+ +++ ++ +P Y GRG Q++ + A++DF +AI NP
Sbjct: 140 RALHYSSQQKYDLALDDYNKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINP 199
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG + + A+ D +KA++ N A RG + + + + A+ D
Sbjct: 200 NDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADY 259
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLA 565
+ + ++ + AY G S + +Y+ A + KAI ++ + A+ + FY
Sbjct: 260 NKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQ 319
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AL L + + ++ FS Y +RG+L +++ A+ D S
Sbjct: 320 KYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYS 363
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 35/264 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY A+S F++ + + + +A RG Q++ E A++D+ +AI N
Sbjct: 207 NRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDIN 266
Query: 446 PSAGEAWKRRGQ----------ARAALGESVE-------------------------AIQ 470
P+ A+ RG A A ++++ A+
Sbjct: 267 PNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALA 326
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL+KA+E N + RGI++ + + A+ D S ++LD +AY G
Sbjct: 327 DLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNRGELYRLQ 386
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+Y A + KAI+++ N+ A+ + Y DL E AL + + I+ ++ AY+
Sbjct: 387 KKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDINPNYADAYNN 446
Query: 591 RGLLLHGLGQHKKAIKDLSSGSRT 614
RG++ + L ++ A+ D + R
Sbjct: 447 RGVVYYNLQKYDLALADYNQAIRI 470
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+ KY A+ ++ ++ +P Y A R + Q++ + A+ D+ +AI+ NP+ G ++
Sbjct: 113 QQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYNKAIELNPNYGLYYR 172
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + A+ D +KA++ PN A + RG + + ++ A+ D + + L+
Sbjct: 173 GRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLN 232
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G +Y+ A + KAI ++ N A+ Y DL E AL
Sbjct: 233 RNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALAD 292
Query: 574 LQQVLYI--DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + I D FS AY RG+ H ++ A+ DL+
Sbjct: 293 YNKAIDINSDDVFS-AYFYRGIFYHRQQKYDLALADLN 329
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 415 PEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
P AL + R Q++ E A+ D +AI+ NP+ A+ R ++ + A+ D
Sbjct: 98 PRALWYVIRAKYYFLQQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDY 157
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E PN RG+ + ++ A+ D + + ++ + AY G S +
Sbjct: 158 NKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQK 217
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A KAI L+RNF +A+ + Y+ E AL + + I+ + AY RG
Sbjct: 218 YDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRG 277
Query: 593 LLLHGLGQHKKAIKDLS 609
L L +++ A+ D +
Sbjct: 278 NLYSDLQKYELALADYN 294
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEAL 418
+K+ + SK+I +D + A N G KY A++ + + ++ +P Y A
Sbjct: 353 EKYELALADYSKAIELDSNYAN--AYYNRGELYRLQKKYDLALADYSKAIEINPNYAYAY 410
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG + ++ E A++D+++AI NP+ +A+ RG L + A+ D ++A+
Sbjct: 411 YNRGNLYSDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQAIRI 470
Query: 479 EPNSADILHERGIVNFKFKDFN 500
PN A + RG++ + + ++
Sbjct: 471 NPNYAQAYYNRGLLYYNLQKYD 492
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 15 KTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEI 69
K + + + + +DS A+A R EL +L +L ++SKAI I + A +Y
Sbjct: 354 KYELALADYSKAIELDSNYANAYYNRGELYRLQKKYDLALADYSKAIEI-NPNYAYAY-- 410
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR YS L+ ++ + D KA+ ++P AY +G + L + + AL+ + +
Sbjct: 411 ---YNRGNLYSDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQA 467
>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 792
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A N G+ AI+ +D LK P Y +A RG A R R+ E I+ + A++
Sbjct: 569 NRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRD-EDVIASYDAALKF 627
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG +AI AL+F+P+ + RGI + A+
Sbjct: 628 QPDYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIA 687
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
A +K + A+ G+AL ++G Y+ A + +AI+ + AW + +Y
Sbjct: 688 SYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDDHCAWYNKACYYALQ 747
Query: 565 ANSEKALECLQQVL 578
N E+ALE LQQ +
Sbjct: 748 GNIEQALENLQQAI 761
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ +RG A G Y AI+ +D LK P Y +A RG
Sbjct: 277 AIASYDQALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDL 336
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + A++ P +AW RG A LG + I +AL+ +P+ D
Sbjct: 337 GNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDA 396
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI K + A+ A +K+ ++ A+ G+AL +G + A ++ A++
Sbjct: 397 WNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALK 456
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +AW + + L +E A+ L I S A++ RG L LG+++ AI
Sbjct: 457 IQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAI 516
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ LK P Y +A RG A E AI+ + A++
Sbjct: 263 NRGIALGNLGRNEDAIASYDQALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQ 322
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG +AI AL+ +P+ + RG + +
Sbjct: 323 PDYHQAWYNRGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIAS 382
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G+AL +G Y+ A + A+++ + AW + L
Sbjct: 383 YDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLG 442
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+E A+ L I +A++ RG+ L LG+++ AI
Sbjct: 443 RNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAI 482
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+Y I+ +DQ LK P P+A RG A E AI+ + A++
Sbjct: 365 NRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQ 424
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG + +AI AL+ +P+ + RGI K A+
Sbjct: 425 PDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIAS 484
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ ++ A+ G L +G + A ++ A+++ + +AW + +L
Sbjct: 485 YDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLG 544
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ L +A++ RG L LG+++ AI
Sbjct: 545 RDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAI 584
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI+ +D LK P +A RG A E AI+ + A++ P EAW
Sbjct: 510 GRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYN 569
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG + +AI AL+F+P+ + RGI K + A +K
Sbjct: 570 RGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQP 629
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G AL +G Y+ A ++ A++ + +AW + +L E A+
Sbjct: 630 DYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASY 689
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + +A++ RG+ L LG+++ AI
Sbjct: 690 DAALKFQPDYHEAWNNRGIALGNLGRYEDAI 720
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N G+Y AI+ +D LK P +A RG A E I+ + +A++
Sbjct: 331 NRGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQ 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI AL+ +P+ + RGI K A+
Sbjct: 391 PDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIAS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ + A+ G+AL +G + A ++ A+++ + +AW + L
Sbjct: 451 YDAALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLG 510
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+E A+ L I +A++ RG L LG+ + AI
Sbjct: 511 RNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAI 550
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ +D LK P EA RG A E AI+ + A++
Sbjct: 535 NRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIASYDAALKFQ 594
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG + I AL+F+P+ + + RG + + A+
Sbjct: 595 PDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQPDYHEAWYNRGNALDELGCYEDAIAS 654
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
A +K + A+ G+AL ++G Y+ A ++ A++ ++ EAW G+L
Sbjct: 655 YDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNNRGIALGNLG 714
Query: 559 QFYQDLANSEKALE 572
++ +A+ E+A++
Sbjct: 715 RYEDAIASFEEAIK 728
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG A +E E AI+ + A++ P +AW RG A LG + +AI +AL+
Sbjct: 227 LFERGNLLAAAKEYEEAIASYDAALKIQPDKHQAWNNRGIALGNLGRNEDAIASYDQALK 286
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ + RG + + A+ A +K+ + A+ G L ++G Y+ A
Sbjct: 287 IQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAI 346
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ A+++ + +AW + +L E + Q L I A++ RG+ L
Sbjct: 347 ACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGK 406
Query: 598 LGQHKKAI 605
LG+++ AI
Sbjct: 407 LGRYEDAI 414
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+Y AI+ +D LK P Y EA RG A E AI+ F EAI+
Sbjct: 671 NRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQ 730
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
P AW + A G +A+++L +A+ P
Sbjct: 731 PDDHCAWYNKACYYALQGNIEQALENLQQAINLNP 765
>gi|23500690|ref|NP_700130.1| TPR domain-containing protein [Brucella suis 1330]
gi|62317211|ref|YP_223064.1| hypothetical protein BruAb2_0269 [Brucella abortus bv. 1 str.
9-941]
gi|83269193|ref|YP_418484.1| hypothetical protein BAB2_0271 [Brucella melitensis biovar Abortus
2308]
gi|161621016|ref|YP_001594902.1| hypothetical protein BCAN_B0985 [Brucella canis ATCC 23365]
gi|163845077|ref|YP_001622732.1| hypothetical protein BSUIS_B0956 [Brucella suis ATCC 23445]
gi|225686724|ref|YP_002734696.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|256015725|ref|YP_003105734.1| TPR domain-containing protein [Brucella microti CCM 4915]
gi|256262142|ref|ZP_05464674.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|260544449|ref|ZP_05820270.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260565013|ref|ZP_05835498.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260567784|ref|ZP_05838253.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260756289|ref|ZP_05868637.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260759716|ref|ZP_05872064.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762956|ref|ZP_05875288.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882112|ref|ZP_05893726.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|261217555|ref|ZP_05931836.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261320430|ref|ZP_05959627.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261750658|ref|ZP_05994367.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261753914|ref|ZP_05997623.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|265990258|ref|ZP_06102815.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992636|ref|ZP_06105193.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|297249260|ref|ZP_06932961.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|376278911|ref|YP_005108944.1| TPR domain-containing protein [Brucella suis VBI22]
gi|384223472|ref|YP_005614637.1| hypothetical protein BS1330_II0956 [Brucella suis 1330]
gi|423168901|ref|ZP_17155603.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|423171666|ref|ZP_17158340.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|423174604|ref|ZP_17161274.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|423176481|ref|ZP_17163147.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|423181095|ref|ZP_17167735.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|423184228|ref|ZP_17170864.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|423187377|ref|ZP_17173990.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|423189799|ref|ZP_17176408.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
gi|23464339|gb|AAN34135.1| TPR domain protein [Brucella suis 1330]
gi|62197404|gb|AAX75703.1| TPR domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82939467|emb|CAJ12437.1| RNA-binding region RNP-1 (RNA recognition motif):TPR repeat
[Brucella melitensis biovar Abortus 2308]
gi|161337827|gb|ABX64131.1| TPR repeat-containing protein [Brucella canis ATCC 23365]
gi|163675800|gb|ABY39910.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642829|gb|ACO02742.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|255998385|gb|ACU50072.1| TPR domain protein [Brucella microti CCM 4915]
gi|260097720|gb|EEW81594.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260152656|gb|EEW87749.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260154449|gb|EEW89530.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260670034|gb|EEX56974.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260673377|gb|EEX60198.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676397|gb|EEX63218.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260871640|gb|EEX78709.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|260922644|gb|EEX89212.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261293120|gb|EEX96616.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261740411|gb|EEY28337.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261743667|gb|EEY31593.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|262763506|gb|EEZ09538.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000927|gb|EEZ13617.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091843|gb|EEZ16165.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|297173129|gb|EFH32493.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|343384920|gb|AEM20411.1| TPR domain-containing protein [Brucella suis 1330]
gi|358260349|gb|AEU08082.1| TPR domain-containing protein [Brucella suis VBI22]
gi|374536088|gb|EHR07608.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|374538107|gb|EHR09617.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|374539173|gb|EHR10679.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|374545685|gb|EHR17145.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|374546528|gb|EHR17987.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|374553496|gb|EHR24911.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|374555181|gb|EHR26590.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|374555839|gb|EHR27244.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
Length = 295
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 206
>gi|306846174|ref|ZP_07478736.1| TPR domain-containing protein [Brucella inopinata BO1]
gi|306273425|gb|EFM55286.1| TPR domain-containing protein [Brucella inopinata BO1]
Length = 283
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G G +A +AI L A+
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAY 173
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ YQ ++A+E + + ++ + Y+ RG+ LG + A D ++
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNT 229
>gi|395786883|ref|ZP_10466610.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
gi|423718198|ref|ZP_17692388.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
gi|395423181|gb|EJF89377.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
gi|395426631|gb|EJF92758.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
Length = 270
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+ +++ L+ P Y ALIGRG +L+ A++DFT+AI++ + G AW R
Sbjct: 106 AALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAWHNRALI 165
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
A G+ AI+D A+ +P + + RG+ D++ A +D +A ++LD
Sbjct: 166 EQAQGQHQAAIKDFGAAMSRQPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIRLDANIAE 225
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+++ + G++KKA ++ KA+ LD F A
Sbjct: 226 SWSNQAMVYEHRGDFKKAHNSYAKALSLDPQFKPA 260
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ L+ +K D + SAY G A G+ + A A+QL+ F A+ + Y+
Sbjct: 40 IASLTNVIKADPRDPSAYNVRGAAYGRAGKTRDALADFTTALQLNPQFYNAYANRALIYR 99
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
L N++ AL+ + L I + A RG L GQ A+ D + T
Sbjct: 100 HLNNTDAALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIET 151
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 71/179 (39%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ T I+++P A+ RG A G++ +A+ D + AL+ P + R ++
Sbjct: 40 IASLTNVIKADPRDPSAYNVRGAAYGRAGKTRDALADFTTALQLNPQFYNAYANRALIYR 99
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +AA++D + +++ + A G G+ A KAI+ AW
Sbjct: 100 HLNNTDAALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAW 159
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ Q + A++ + + Y+ RGL L A D ++ R
Sbjct: 160 HNRALIEQAQGQHQAAIKDFGAAMSRQPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIR 218
>gi|425464999|ref|ZP_18844309.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
gi|389832848|emb|CCI23201.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
Length = 437
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TRI++ + +RG+ + + KY A++ F + + DP Y EA RG Q +
Sbjct: 35 TRIAQGNNQDAIGHYNRGVGYIQQKKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEK 94
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SDF +A+ NP EA+ RG G+ A+ D ++AL P A RG
Sbjct: 95 PDLALSDFNQALNINPRLAEAYNGRGFLYGVQGKPDLALSDYNQALNINPRLALAYSNRG 154
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + + A+ + + + ++ AY GL G+ A +AI ++ F
Sbjct: 155 NLYRQQEKPDLALAEFNKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRF 214
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + Y+ + AL Q + I+ R++ AY+ RG L G+ A+ D +
Sbjct: 215 AEAYNNRGFLYRQQGKPDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFN 273
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 5/247 (2%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + +K+I++D R + RG+ + + K A+S F+Q L +P EA G
Sbjct: 59 KKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEKPDLALSDFNQALNINPRLAEAYNG 118
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q + + A+SD+ +A+ NP A+ RG + A+ + +KAL P
Sbjct: 119 RGFLYGVQGKPDLALSDYNQALNINPRLALAYSNRGNLYRQQEKPDLALAEFNKALNINP 178
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ + RG++ ++ + A+ D + + ++ AY G G+ A +
Sbjct: 179 RLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLYRQQGKPDLALSDY 238
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ + A+ + Y + + AL Q L I+ R AY RGLL G+
Sbjct: 239 NQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLAYSNRGLLYDIQGK 298
Query: 601 HKKAIKD 607
A+ D
Sbjct: 299 PDLALSD 305
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+++++ RL+ RG+ +GK A+S F+Q + +P + EA RG Q +
Sbjct: 171 NKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLYRQQGK 230
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SD+ +AI NP A+ RG A G+ A+ D ++AL P RG
Sbjct: 231 PDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLAYSNRG 290
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + A+ D + + ++ AY G G+ A + +A+ ++
Sbjct: 291 LLYDIQGKPDLALSDYNQALNINPRFALAYNNRGTLYYKQGKSDLALSDYNQALNINPRL 350
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y + ++ AL Q L I+ RF++AY RG+L + + +KAI+DL
Sbjct: 351 ALAYYNRGTLYYEQGKADLALSDFNQALNINPRFAEAYSNRGVLYYYRLEREKAIRDL 408
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ F++ L +P EA RG Q + + A+SDF +AI NP EA+ RG
Sbjct: 166 ALAEFNKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLY 225
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ A+ D ++A+ P A + RG + + + A+ D + + ++ A
Sbjct: 226 RQQGKPDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLA 285
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y+ GL G+ A + +A+ ++ F A+ + Y S+ AL Q L
Sbjct: 286 YSNRGLLYDIQGKPDLALSDYNQALNINPRFALAYNNRGTLYYKQGKSDLALSDYNQALN 345
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
I+ R + AY+ RG L + G+ A+ D +
Sbjct: 346 INPRLALAYYNRGTLYYEQGKADLALSDFN 375
>gi|75909713|ref|YP_324009.1| protein prenyltransferase subunit alpha [Anabaena variabilis ATCC
29413]
gi|75703438|gb|ABA23114.1| Protein prenyltransferase, alpha subunit [Anabaena variabilis ATCC
29413]
Length = 1007
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+A N G+ AI+ FD+ ++ P A RG A E AI+ + AI+
Sbjct: 159 LNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNLGRFEQAIASYNRAIEF 218
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNA 501
+ EAW RG +L EA+ AL+ PN ++ + RG F + F
Sbjct: 219 KHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPNFPEVFNAWYGRGNTLFNLEKFEE 278
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++ ++ SA+ G+AL ++G++++A ++ KAI+ + AW +
Sbjct: 279 AIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIASYDKAIEFKADDYSAWNYRGVAL 338
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A+ + + A++ RG+ L LG+ ++AI
Sbjct: 339 ANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALSNLGRFQEAI 382
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A N G++ AI+ +++ ++ +PEA RG + + A++ F A+Q N
Sbjct: 194 SRGVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQIN 253
Query: 446 PSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P+ E AW RG L + EAI KA+EF+ + + RG+ F A
Sbjct: 254 PNFPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEA 313
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++ ++ SA+ Y G+AL+++G +++A ++ KAI+ + AW +
Sbjct: 314 IASYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALS 373
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+L ++A+ + + F A+ RG++
Sbjct: 374 NLGRFQEAITSYDKAIEFKADFYIAWMNRGIV 405
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E + F +AI+ EAW +G A A LG+ +AI KA+EF+P+ + R
Sbjct: 136 EEEETSNQFNDAIELTSDEAEAWLNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSR 195
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ F A+ + ++ A+T G+ L+S+ Y++A + A+Q++ N
Sbjct: 196 GVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPN 255
Query: 550 FLE---AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
F E AW +L E+A+ + + A++ RG+ L LGQ ++AI
Sbjct: 256 FPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAI 314
>gi|189022474|ref|YP_001932215.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
gi|189021048|gb|ACD73769.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
Length = 283
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 150 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 194
>gi|354567937|ref|ZP_08987104.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353541611|gb|EHC11078.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 539
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y +AI ++Q L+ P + RG AR + E AI+D+T+AI NP+ +A+
Sbjct: 257 KGQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYN 316
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ G AR LG+ AI D + A+ PN R + + D A+ED + ++
Sbjct: 317 KSGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMY 376
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ L L IG+Y+ + L+ +L + A+ + DL + E A+
Sbjct: 377 PHPEAD---LNLKNMQIGDYQGEGDVFLQTSELKCHDFVAYKNRGDLRLDLGDYEGAIAD 433
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + I+ + AY+ RG + LG + AI D +
Sbjct: 434 YTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYT 469
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 151/330 (45%), Gaps = 17/330 (5%)
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRN 365
+ DK +S+S S+ NS +KSS+ K++ + +L+ + L +E
Sbjct: 203 NYQDKQTSNSESIYQVPHNS--LTKSSLYSVKNAKISSPSEELNLIYIKL---GDECSEK 257
Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
++ I+ ++++ + D RG+A+ G Y AI+ + Q + +P Y +A
Sbjct: 258 GQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYNK 317
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
G AR + E AI+D+T AI NP+ A+K R R LG+ AI+D ++ + P
Sbjct: 318 SGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMYP 377
Query: 481 NS-ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+ AD+ + N + D+ + +L + AY G +G+Y+ A
Sbjct: 378 HPEADL----NLKNMQIGDYQGEGDVFLQTSELKCHDFVAYKNRGDLRLDLGDYEGAIAD 433
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI+++ + +A+ + DL + A+ + + I+ + AY+ RG LG
Sbjct: 434 YTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYTETIKINFNDADAYYNRGNARCCLG 493
Query: 600 QHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
+ AI D T + + NL +++ +
Sbjct: 494 DKQGAIADFHKA--TSIYYTEGNLAKYKKV 521
>gi|290988656|ref|XP_002677013.1| predicted protein [Naegleria gruberi]
gi|284090618|gb|EFC44269.1| predicted protein [Naegleria gruberi]
Length = 307
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 12/234 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + A+ F + ++ DP + A RG E E AI DF++AI +
Sbjct: 57 NRGVTYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLD 116
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG + A+GE A+ D +K +E EP S D + RG ++F ++ + A++D
Sbjct: 117 PNFSDFYYNRGNSYCAIGEYENAMSDYTKCIELEP-SFDCYYNRGNLHFGYQSIDKAIDD 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + ++ + G A I Y A +AI+L+ NF + + +
Sbjct: 176 FTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTK 235
Query: 566 NSEKALECLQQVLYIDKRF-----------SKAYHLRGLLLHGLGQHKKAIKDL 608
+ KAL+ +V+ I + AYHLRG + + + +KA D
Sbjct: 236 DYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDF 289
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILH-ERGI 491
+ DF I++ P+ G+A+ +RG + AI+D +KA+ PN LH RG+
Sbjct: 1 MDDFNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGV 60
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D + A++D S ++LD +AY GL + + E + A + KAI LD NF
Sbjct: 61 TYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFS 120
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + Y + E A+ + + ++ F Y+ RG L G KAI D +
Sbjct: 121 DFYYNRGNSYCAIGEYENAMSDYTKCIELEPSFD-CYYNRGNLHFGYQSIDKAIDDFT 177
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 355 LKETSNEAKRNKKFCVTRISK--------SKSISVD-----FRLSRGIAQVNEGKYASAI 401
L + + A N+ TR+ + SK+I +D F +RG + G+Y +A+
Sbjct: 81 LDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYYNRGNSYCAIGEYENAM 140
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
S + + ++ +P + + RG + ++ AI DFT++I+ +W RG A
Sbjct: 141 SDYTKCIELEPSF-DCYYNRGNLHFGYQSIDKAIDDFTKSIELKSDFSMSWMHRGNAYCK 199
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE------ 515
+ AI DL++A+E PN RGI KD++ A++D + +++
Sbjct: 200 ISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTKDYSKALDDFTRVIEIVPTLGPHME 259
Query: 516 -----NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ SAY G ++ E +KA+ KAI+L+
Sbjct: 260 MLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIELN 296
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +KS + DF +S RG A Y AI + ++ +P +P RG A
Sbjct: 172 AIDDFTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAF 231
Query: 426 AFQRELEAAISDFTEAIQSNPSAGE-----------AWKRRGQARAALGESVEAIQDLSK 474
++ A+ DFT I+ P+ G A+ RG + E+ +A D K
Sbjct: 232 TLTKDYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKK 291
Query: 475 ALEFEP 480
A+E P
Sbjct: 292 AIELNP 297
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++S+AI LD +Y NR Y+++E + I+D KA+ LDP Y
Sbjct: 71 AMDDFSRAIE-LDPSFHAAYN-----NRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYY 124
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G ++ A+G E A+S + K
Sbjct: 125 NRGNSYCAIGEYENAMSDYTK 145
>gi|306841308|ref|ZP_07474017.1| TPR domain-containing protein [Brucella sp. BO2]
gi|306288611|gb|EFM59947.1| TPR domain-containing protein [Brucella sp. BO2]
Length = 283
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G G +A +AI L A+
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAY 173
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ YQ ++A+E + + ++ + Y+ RG+ LG + A D ++
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNT 229
>gi|220907546|ref|YP_002482857.1| hypothetical protein Cyan7425_2135 [Cyanothece sp. PCC 7425]
gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 373
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q+ G A++ ++Q+++ P A RG + L+ AI+DF I+ NP
Sbjct: 125 RGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIADFNRGIKLNP 184
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG +A LG EAI D + + PN H RG + D A+ D
Sbjct: 185 NEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADY 244
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L AY G A + G+ + A + +AI+L+ F + + +L N
Sbjct: 245 DQVIRLSPNCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGN 304
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ Q + ++ ++AY+ RG G + AI D
Sbjct: 305 RQAAIADYNQAIKLNPELAEAYYSRGGNRRHSGDKQGAIAD 345
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK IS + + A+ Y AI+ DQ ++ +P Y EA + RG+ + + AI
Sbjct: 46 SKQISAEEFFGQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAI 105
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D + I+ NP+ A+ RG + G A+ D ++ + PN A+ RG + +
Sbjct: 106 ADLDQGIKLNPNNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQ 165
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW- 554
+ A+ D + +KL+ AY G + +G Y++A + I+L N A+
Sbjct: 166 LDNLQGAIADFNRGIKLNPNEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYH 225
Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
G L + DL + A+ QV+ + AY+ RG G + AI D
Sbjct: 226 RRGDLRAYTGDL---QGAIADYDQVIRLSPNCHCAYYDRGFARAQSGDLQGAIAD 277
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q G Y AI+ F Q ++ P P A RG RA+ +L+ AI+D+ + I+ +P
Sbjct: 193 RGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADYDQVIRLSP 252
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG ARA G+ AI D ++A++ P A + RG + + + AA+ D
Sbjct: 253 NCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGNRQAAIADY 312
Query: 507 SACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +KL+ E AY + G +I +Y+KA E L IQ D++
Sbjct: 313 NQAIKLNPELAEAYYSRGGNRRHSGDKQGAIADYQKAAE--LAQIQGDKDL 361
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E G+ A+ + + + AI+ +AI+ NP+ EA+ RG + LG EAI DL +
Sbjct: 52 EEFFGQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQG 111
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN+A RG + + + A+ D + ++L +AY G
Sbjct: 112 IKLNPNNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRG----------- 160
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
AIQL L N + A+ + + ++ +KAY +RG +
Sbjct: 161 -------AIQL----------------QLDNLQGAIADFNRGIKLNPNEAKAYFIRGTIQ 197
Query: 596 HGLGQHKKAIKDLS 609
GLG +++AI D
Sbjct: 198 AGLGNYQEAIADFG 211
>gi|428306730|ref|YP_007143555.1| serine/threonine protein kinase [Crinalium epipsammum PCC 9333]
gi|428248265|gb|AFZ14045.1| serine/threonine protein kinase with TPR repeats [Crinalium
epipsammum PCC 9333]
Length = 705
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 34/277 (12%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEA-- 433
K +V+ + RG A N KY AI F++ ++ YPEA GRG A QR EA
Sbjct: 395 KQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAIT 454
Query: 434 -------------------------------AISDFTEAIQSNPSAGEAWKRRGQARAAL 462
AIS + +A+ P AW RG + L
Sbjct: 455 SYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNL 514
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
++ EAI+ +A++F+P++ + R + ++ AVE VKL + N +
Sbjct: 515 NKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWYS 574
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G AL + Y+ A ++ KAI+L RN + W + L E A+ Q +
Sbjct: 575 RGWALHQLQRYESAIASYSKAIELKRNNYQTWYNRGNSLYQLQRYEDAIASYAQAVRYKP 634
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ +A++ RG L L +++ AI R +L
Sbjct: 635 DYYEAWYSRGNALLNLKRYESAIASYDQAIRYKPNYL 671
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A ++Q ++ EA +GRG A ++ AI F +AIQ + EAWK R
Sbjct: 380 RYEDAQQAYEQAIQIKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGR 439
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A L EAI KAL+F+P+ + RG + ++ A+ V +
Sbjct: 440 GEALIGLQRYQEAITSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPD 499
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G +L ++ + K+A E++ +A++ + +AW +L +A+E
Sbjct: 500 YSVAWYNRGNSLVNLNKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYD 559
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + + + + ++ RG LH L +++ AI S
Sbjct: 560 QAVKLQQSNYQTWYSRGWALHQLQRYESAIASYS 593
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY A+ ++ + + P Y EA + +G + E A + +AIQ
Sbjct: 337 RGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQIKQ 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A EAW RG A L + +AI KA++ + N + RG + + A+
Sbjct: 397 NAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAITSY 456
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ ++ G AL ++ Y +A ++ +A+ ++ AW + +L
Sbjct: 457 DKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNLNK 516
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+++A+E Q + +A++ R +L LG++ +A++
Sbjct: 517 NKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVE 556
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG A A + E A+ + +AI P EAW +G+ AL +A Q +A++
Sbjct: 334 LYQRGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQ 393
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ N+ + RG K + A++ ++L A+ G AL + Y++A
Sbjct: 394 IKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAI 453
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
++ KA+Q + +W +L ++A+ +Q + +S A++ RG L
Sbjct: 454 TSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVN 513
Query: 598 LGQHKKAIK 606
L ++K+AI+
Sbjct: 514 LNKNKEAIE 522
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A G ++ I + S A E L++RG + + A++ + L E A+
Sbjct: 317 AGGITINNIINYSNATE--------LYQRGNALAELNKYEDALKVYQKAINLKPEYLEAW 368
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G L ++ Y+ A++A+ +AIQ+ +N +EAW +L A++ ++ + +
Sbjct: 369 LAKGKMLLALKRYEDAQQAYEQAIQIKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQL 428
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWNLTRW 626
+ +A+ RG L GL ++++AI + P ++ WN W
Sbjct: 429 QINYPEAWKGRGEALIGLQRYQEAITSYDKALQ-FQPDDYVSWNSRGW 475
>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 810
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI+ FD +L++ P A RG R E +AAISD+ EA+ +P E +
Sbjct: 389 GKYPDAITQFDTLLEQQPKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNH 448
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ LG+ +AI D KA+ +PN A G V F AAV++L ++ +
Sbjct: 449 RGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ SA+ G S++G+ AE+ +A++L + + L + A+
Sbjct: 509 NHLSAHVNRGSYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADY 568
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q L I+ + ++A+ G + + G+ ++A K
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARKSF 602
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + SA F+Q L+ Y EA + G A + AI+ F ++ P A++
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPDAITQFDTLLEQQPKTAAAFRE 414
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG R A+GE AI D ++AL +P A+ + RG + + A+ D ++L
Sbjct: 415 RGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYRKAIRLQP 474
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG G+ + A + KAIQ + N L A + + L +S+ A +
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSALGDSDGAEQDW 534
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
++ L + R +K Y RG L + + AI D + + T+ P L
Sbjct: 535 ERALELPVRTAKEYTSRGYAKSRLDRKQDAIADYNQ-ALTINPQL 578
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ + AI+ ++Q L +P A G Q E+E A F +A+QSN
Sbjct: 550 SRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSN 609
Query: 446 PSAGEAWKRRGQARAALGESVE---AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P++ A+ RG+ RA G+ + A+QD +A+ P +L+ R F + A
Sbjct: 610 PNSTSAYLLRGELRAYQGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRA 669
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN------FLEAWGH 556
+ D + ++++ + + YT G + +Y+KA + + + IQ++ A+ +
Sbjct: 670 LADCNKGLEINPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSN 729
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L + + AL+ L L I ++ Y+ RGLL + + AI DL
Sbjct: 730 RASARIQLKDLDGALKDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDL 781
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + + + FR RG + G+Y +AIS +++ L DP E RG A+ +
Sbjct: 400 TLLEQQPKTAAAFR-ERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGK 458
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI+D+ +AI+ P+ + + G G+ A+++L KA++ E N RG
Sbjct: 459 YEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRG 518
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D + A +D ++L YT G A S + + A + +A+ ++
Sbjct: 519 SYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADYNQALTINPQL 578
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
A +L + + E+A + Q L + + AY LRG L GQ
Sbjct: 579 TRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRGELRAYQGQQ 629
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 34/194 (17%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
++A +F +A++ EA + G+ A +G+ +AI LE +P +A ERG
Sbjct: 358 QSATENFEQALELKADYTEAALKLGETYAEIGKYPDAITQFDTLLEQQPKTAAAFRERGA 417
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ F +IGEY+ A + +A+ LD
Sbjct: 418 IRF----------------------------------AIGEYQAAISDYNEALTLDPKDA 443
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
E + H +L EKA+ ++ + + ++ Y G + G+ + A+K+L
Sbjct: 444 ETYNHRGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKA 503
Query: 612 SRTMMPHLIWNLTR 625
+ HL ++ R
Sbjct: 504 IQAESNHLSAHVNR 517
>gi|384207733|ref|YP_005593453.1| hypothetical protein Bint_0239 [Brachyspira intermedia PWS/A]
gi|343385383|gb|AEM20873.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 392
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +++ ++ P + +A R ++ E + AI D+ +AI+ N +A+ RG
Sbjct: 127 YKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRG 186
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ LG EAI D + A+ AD R F KD+ AVED +K++ +
Sbjct: 187 NVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKY 246
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+ ++G Y++A + KAI+LD N +A+ + L ++A+ Q
Sbjct: 247 TKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAILYYDQ 306
Query: 577 VLYIDKRFSKAYHLRGL 593
+ ++ +S++Y RG+
Sbjct: 307 AIKLNPNYSESYFNRGI 323
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 112/221 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI + G A+ FD+ ++ + EA R +A ++ + +I D+ +AI+
Sbjct: 81 YNRGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEV 140
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A+ R ++ AL E EAI+D KA+E+ + D + RG V K +FN A++
Sbjct: 141 YPHFADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAID 200
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + +++E Y A I +YK A E + I+++ + +A+ + +
Sbjct: 201 DYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTM 260
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A++ + + +D + AY+ + + L+ LG + +AI
Sbjct: 261 GAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAI 301
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 107/216 (49%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SA+ + +K + + A RG E A+ DF + I+ N + EA+
Sbjct: 55 NEDSYKSAVEDYTWTIKLNDKFAAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G + +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ I+ +++KAY RG++ +G +++AIKD
Sbjct: 235 DFDELIKINPKYTKAYLNRGIIAMTMGAYQEAIKDF 270
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RG + G + AI + + + + + R A+ ++ + A+ DF E
Sbjct: 179 IDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDE 238
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ NP +A+ RG +G EAI+D KA+E + N AD + + + ++
Sbjct: 239 LIKINPKYTKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYD 298
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
A+ +KL+ +Y G++ S KK
Sbjct: 299 EAILYYDQAIKLNPNYSESYFNRGISKSKTAYMKK 333
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGES---VEAIQDLSKALEFEPNSADILHERG 490
AI F+E I+ + + EA+ R A+A + A++D + ++ A + RG
Sbjct: 25 AIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKFAAAYYNRG 84
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I+N + A++D ++L+ + AY +S+ +YK + E + KAI++ +F
Sbjct: 85 IINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHF 144
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ + L+ ++A++ + + + F AY+ RG + LG +AI D ++
Sbjct: 145 ADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTN 204
Query: 611 G 611
Sbjct: 205 A 205
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
FK K++ A+E S +KLD AY A ++I YK A E + I+L+ F
Sbjct: 17 FKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L NSE+AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GSRTMMPHL 619
+ PH
Sbjct: 137 AIE-VYPHF 144
>gi|390439560|ref|ZP_10227951.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
gi|389837049|emb|CCI32075.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
Length = 317
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + + GI Q+ G Y A+ F+Q L+++ A R + ++ A
Sbjct: 42 ARSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ ++ +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIQLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GLA ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLAHLALHNFTSAKADFHQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L E+++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|425447075|ref|ZP_18827069.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9443]
gi|389732454|emb|CCI03612.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9443]
Length = 317
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 6/252 (2%)
Query: 370 VTRISKS-KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ R+ K+ KS+ + + L GI Q+ G Y A+ F+Q L+++ A R +
Sbjct: 35 LPRLGKAEKSVRLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYL 94
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ A D T ++Q A+ RG A LG+ +A+ D ++ + +P +
Sbjct: 95 QDYLHAWQDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIRLKPTYYQAYYN 154
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKA 543
RG+V K++ A+ D + ++ + + Y GL+ ++ + A+ +A
Sbjct: 155 RGLVQAAMKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFTQA 214
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L++N A+ +L L ++++ L + + ID ++ AY RGLL H LG ++
Sbjct: 215 LRLNKNNASAYYNLACTAHQLGEYDRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQS 274
Query: 604 AIKDLSSGSRTM 615
A+ DL+ G+ +
Sbjct: 275 ALADLNQGANHL 286
>gi|209954827|ref|NP_001129634.1| tetratricopeptide repeat protein 13 precursor [Rattus norvegicus]
Length = 792
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 214
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+A Y GL G K+A EA +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 306
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 167 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFF 226
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 227 HRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 286
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ + G++ + +A K +
Sbjct: 287 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFYEGIKAQTKVM 344
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 15/227 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + L+ V G Y AI F +L+ + P +GR + A++D T
Sbjct: 127 STNEELAIAYVLVGSGLYDEAIRHFSTMLQI--LSP---LGR---------INEAVNDLT 172
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AIQ PSA ++ RG + A +D ++LE N + +G+ F
Sbjct: 173 KAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLL 231
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 232 KEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGM 291
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL GQ + IK
Sbjct: 292 MLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFYEGIK 338
>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
Length = 315
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARTVQLDPKYKPA 306
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 226
>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Length = 923
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A +G + AI+ F + ++ +P P A RG A + +I DFT+AI
Sbjct: 657 LNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIAL 716
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P G A+ R A +LG +AI+D ++AL+ A + RG+ + D AA++
Sbjct: 717 DPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAID 776
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++ + +A L + ++G+ ++A +AI+LD + E + + +
Sbjct: 777 DFAEALRIQPSDVAAAVNLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQR 836
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +A L ++ A LRGL L LG+ A+ DLS
Sbjct: 837 GDPTQAAADFAAALKLNPDLPSALRLRGLALFKLGKRLTALLDLS 881
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G AI + +L+ DP AL+ RG + E E AI D+ EAI+
Sbjct: 589 FNRGLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRL 648
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG A +A G+ AI D ++++E EP + + RG F ++
Sbjct: 649 APDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIP 708
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + + LD E+ SAY AL S+G +A E + +A+Q
Sbjct: 709 DFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQALQ 749
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 23/248 (9%)
Query: 376 SKSISVDFRLSRG-----IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D R G +A G + AI +++ P P A + RG + +
Sbjct: 507 SRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGD 566
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+++AI+ +P + RG A A G +EAIQD + LE +P L RG
Sbjct: 567 YDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQDYTSVLEIDPKDVSALVNRG 626
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--- 547
+F A+ D ++L ++ A+ G A S+ G++++A ++I+L+
Sbjct: 627 FTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRN 686
Query: 548 ------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
R F AW L QF + + + Q + +D AY R LH LG
Sbjct: 687 PAAYYNRGF--AWTCLGQFARSIPD-------FTQAIALDPEDGSAYANRAFALHSLGAV 737
Query: 602 KKAIKDLS 609
+AI+D +
Sbjct: 738 AQAIEDYT 745
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
++ L+ +P P ++ RG R E AI+D++ AI+ +P E +++R A +G
Sbjct: 472 IEERLQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMG 531
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ +AI+D S +E P +RG + D++ A+ D S ++LD S Y
Sbjct: 532 DFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNR 591
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GLAL + G +A + + +++D + A + Y+ EKA+ + + +
Sbjct: 592 GLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPD 651
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ RG G H++AI D +
Sbjct: 652 HALAHLNRGYAFSAQGDHERAIADFT 677
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + Y AI+ + + ++ DP PE R A + E AI D + I+
Sbjct: 487 LRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIEL 546
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ +RG + +G+ AI D SKA+ +P RG+ A++
Sbjct: 547 SPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQ 606
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ +++D ++ SA G GE++KA + +AI+L + A HL + Y
Sbjct: 607 DYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPD--HALAHLNRGYAFS 664
Query: 565 ANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A E+A+ + + ++ R AY+ RG LGQ ++I D +
Sbjct: 665 AQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFT 711
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG G++ AI +D+ ++ P + A + RG A + Q + E AI+DFT +I+
Sbjct: 623 VNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIEL 682
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG A LG+ +I D ++A+ +P R A+E
Sbjct: 683 EPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIE 742
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++ + S Y G+A G+++ A + +A+++ + + A +L Q +
Sbjct: 743 DYTQALQRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNLAVCRQAV 802
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+ E+AL L + + +D ++ Y +RG L
Sbjct: 803 GDLERALADLNEAIRLDPDEAEIYLIRGRL 832
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%)
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D+ + L+ EP+ + RG + K + + A+ D S ++LD + LA +
Sbjct: 471 DIEERLQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLM 530
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G++++A I+L A+ Y + + ++A+ + + +D + Y
Sbjct: 531 GDFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFN 590
Query: 591 RGLLLHGLGQHKKAIKDLSS 610
RGL L G +AI+D +S
Sbjct: 591 RGLALRARGMELEAIQDYTS 610
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 27/172 (15%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASA-----ITARIELAKLCSLRNWSKAIRILDSLL 63
S +++ + I + + +R+D S + R +L ++++++ + I
Sbjct: 560 SYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQDYTSVLEI----- 614
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
++ + NR F Y + IRD D+A++L P A++ +G AFSA G E A+
Sbjct: 615 -DPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAI 673
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV--TCEYDVSNSMSSLT 173
AD + +ELE AA +R TC + S+ T
Sbjct: 674 --------------ADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFT 711
>gi|294853920|ref|ZP_06794592.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
gi|294819575|gb|EFG36575.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
Length = 315
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNS 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARAVQLDPKYKPA 306
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 226
>gi|186684246|ref|YP_001867442.1| hypothetical protein Npun_R4121 [Nostoc punctiforme PCC 73102]
gi|186466698|gb|ACC82499.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 1319
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N + R S + + +G++Q G AI+ +D+ ++ P + E RG
Sbjct: 396 NSPGIIERHSNNPITNAQGWFYQGLSQAKTGDLLGAIASYDRAIELQPEFSEYWFNRGLI 455
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
E AI+ + AI+ P +AW RG LG EAI KA+E +P+ +
Sbjct: 456 LFHLERFEEAIASYETAIELKPDFYKAWYNRGGTLGELGYFEEAIASFDKAIEVKPDYQE 515
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+G+ K A+ + L+ E++ + + G+AL+ ++ +A ++ KA+
Sbjct: 516 AWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIALAVGEQFAEAIISYDKAL 575
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++ + E W +L +A+ + L + F A++ RG+ L LG+ ++A
Sbjct: 576 EINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLAWYNRGIALDNLGRRQEA 635
Query: 605 I 605
I
Sbjct: 636 I 636
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +RG+ + ++ AI+ ++ ++ P + +A RG E AI+ F +A
Sbjct: 447 EYWFNRGLILFHLERFEEAIASYETAIELKPDFYKAWYNRGGTLGELGYFEEAIASFDKA 506
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P EAW +G A LG EAI +AL EP + + RGI + F
Sbjct: 507 IEVKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIALAVGEQFAE 566
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++++ E + G+ L ++G + +A + KA+ + +F AW +
Sbjct: 567 AIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLAWYNRGIAL 626
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++A+ +Q + I F A++ + + L L Q +AI
Sbjct: 627 DNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFYLEQFAEAI 670
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ FD+ ++ P Y EA +G A L AI + +A+ P E W
Sbjct: 494 GYFEEAIASFDKAIEVKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYH 553
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI KALE P ++ +RG+V F ++ A+ + +
Sbjct: 554 RGIALAVGEQFAEAIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQA 613
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ A+ G+AL ++G ++A ++ +AI + +F AW + + FY L +A+
Sbjct: 614 DFYLAWYNRGIALDNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFY--LEQFAEAIA 671
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
C L I + + +A+ RG + L + A+ +LSS P L
Sbjct: 672 CYDNALEIKQDYWEAWIGRGTAIGNL-VNSDALLNLSSNITAANPAL 717
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ + D++ S+G+A + G AI +DQ L +P E RG A
Sbjct: 499 AIASFDKAIEVKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIAL 558
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A + AI + +A++ NP E W RG LG EAI KAL + +
Sbjct: 559 AVGEQFAEAIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLA 618
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI A+ + + + A+ +AL + ++ +A + A++
Sbjct: 619 WYNRGIALDNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFYLEQFAEAIACYDNALE 678
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKAL 571
+ +++ EAW +L NS+ L
Sbjct: 679 IKQDYWEAWIGRGTAIGNLVNSDALL 704
>gi|237816772|ref|ZP_04595764.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|376270821|ref|YP_005113866.1| hypothetical protein BAA13334_II00651 [Brucella abortus A13334]
gi|376277527|ref|YP_005153588.1| hypothetical protein BCA52141_II1638 [Brucella canis HSK A52141]
gi|384213475|ref|YP_005602558.1| hypothetical protein BM590_B0937 [Brucella melitensis M5-90]
gi|384410576|ref|YP_005599196.1| hypothetical protein BM28_B0938 [Brucella melitensis M28]
gi|384447076|ref|YP_005661294.1| hypothetical protein [Brucella melitensis NI]
gi|237787585|gb|EEP61801.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|326411123|gb|ADZ68187.1| TPR repeat-containing protein [Brucella melitensis M28]
gi|326554415|gb|ADZ89054.1| TPR repeat-containing protein [Brucella melitensis M5-90]
gi|349745073|gb|AEQ10615.1| TPR repeat-containing protein [Brucella melitensis NI]
gi|363401993|gb|AEW18962.1| TPR repeat-containing protein [Brucella abortus A13334]
gi|363405901|gb|AEW16195.1| TPR repeat-containing protein [Brucella canis HSK A52141]
Length = 315
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARAVQLDPKYKPA 306
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 226
>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
Length = 1297
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 14/239 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G+A G A+ + K DP A A Q+E + A +A+Q
Sbjct: 65 VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124
Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
+ + E W+ + + G+ EA I+ K LE+ P +IL ++G
Sbjct: 125 DRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +K + + V+ + V ++ E++ A+ YLG A ++I ++A A KAI++D N
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++W +L Y+ E+AL+C ++ + ID K+++L +LH L + +A+K ++
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSIN 303
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 34/261 (13%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+L + I + +G++ ISI + ILK +P +L+ A +LE+A++ A
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
+ PS E WK R L + E I DL++A
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502
Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
L+ +S + + G++ +K D A ++ NK + L +
Sbjct: 503 KTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y +A E + KA++LD N + W + + E+A++ L ++ F+KA +
Sbjct: 563 LGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622
Query: 590 LRGLLLHGLGQHKKAIKDLSS 610
+G L LG + +A+K +S
Sbjct: 623 EKGDSLIKLGNYDEALKIFTS 643
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+LE A F +A NP+ + WK LG+ EA++ KAL+ +PN + +E+
Sbjct: 531 DLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYNEAVEYYEKALKLDPNDMRLWYEK 590
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
GI K K + A++ + +KL+ E A G +L +G Y +A + I+L+R
Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLER 649
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 387 RGIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +A V E GKY A+ +++ LK DP +G + E AI F A++
Sbjct: 554 KNLAWVMEKLGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKL 613
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A +G + LG EA++ + ++ E +++ +++R + FK +++ AA++
Sbjct: 614 NSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALK 673
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFY 561
DL+ + +++ K +L L E K E E + + +++ + AW L Y
Sbjct: 674 DLNLALNYERKEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAY 729
Query: 562 QDLANSEKALECLQQVLYI 580
+ + A+ + L I
Sbjct: 730 DSMGKVDSAIATYRDALEI 748
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 44/260 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------- 439
+G + + G Y A+ IF ++K + E + R R +RE EAA+ D
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683
Query: 440 --------------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
E + N AW+ A ++G+ AI
Sbjct: 684 KEKFLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYR 743
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
ALE P++ +L+E K F A++ + + E+ L AL + +Y
Sbjct: 744 DALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIKLKKY 803
Query: 534 KKAEEAHLKAIQLDRN--FLEAWGHLTQFYQDLANSEKALECLQQVL------YIDKRFS 585
+ A+E L+A++L++N LE G T +Y L N A+E + L +I + +
Sbjct: 804 EDAKEYLLRALELNKNAELLELLGD-TYYY--LKNYTSAIEHYKDALNLNASPHIYHKLA 860
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
KAY+ G L + ++AI
Sbjct: 861 KAYYKVGDLQEAIKSIERAI 880
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 34/195 (17%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +D+ L+ P E L +G + + + + N EAW G
Sbjct: 159 YPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLG 218
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A A + EAI L KA++ +PN +
Sbjct: 219 AAYANIDRMREAINALKKAIKIDPN----------------------------------D 244
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
K ++ LG+ GEY++A + +AI++D N ++W L +AL+ + +
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304
Query: 577 VLYIDKRFSKAYHLR 591
L +DK++ A LR
Sbjct: 305 ALELDKKYESALLLR 319
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D RL +GI +Y AI FD LK + + +AL +G + + A+ FT
Sbjct: 583 DMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I+ E +R R E A++DL+ AL +E ++ ++ + + KD+
Sbjct: 643 SLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYERKEKFLVLKKDVCK-ELKDY 701
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E + ++K+N SA+ L +A S+G+ A + A+++
Sbjct: 702 ECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEI 748
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%)
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ N + E W G LG+ A KA PN+ V K +N
Sbjct: 508 GLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYN 567
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AVE +KLD + + G+ L I Y++A ++ A++L+ F +A
Sbjct: 568 EAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDS 627
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L N ++AL+ ++ +++ S+ + R L +++ A+KDL+
Sbjct: 628 LIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLN 676
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N G+ + RR + + E++E I++ E E SA +L G+ K
Sbjct: 28 INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E KLD N SAYT + L+ EYKKA KA+Q+DR E W + Y
Sbjct: 80 ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWETKAEIY 139
Query: 562 QDLANSEKALECLQQVL 578
Q + ++AL+ ++++
Sbjct: 140 QLKGDIDEALDVYKKLI 156
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
CV + K SI+ + + + G A N + AI+ + +K DP ++ I G
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E E A+ F EAI+ +P+ ++W L EA++ +++ALE +
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKA 536
L R V K K ++ E +ACV L E+ L L+ GE +KA
Sbjct: 316 LLLRRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKA 366
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++K +E K K+ R K + + F+ +G+ YA + I +++ +
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA + G A A + AI+ +AI+ +P+ ++W G GE EA++
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A++ +PN + V + + A++ ++ ++LDK+ +SA
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
>gi|261216409|ref|ZP_05930690.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260918016|gb|EEX84877.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 295
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAMQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N A++D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAMQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 206
>gi|186684702|ref|YP_001867898.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
gi|186467154|gb|ACC82955.1| serine/threonine protein kinase with TPR repeats [Nostoc
punctiforme PCC 73102]
Length = 687
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 34/256 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y A+ F+ +++ DP A RG + E A +D ++AI NP
Sbjct: 317 GLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADSSQAILLNPQ 376
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
G A+ RG A + LG+ EAI D ++A++ + A + RG+ + KD A+ D S
Sbjct: 377 DGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGAIGDFS 436
Query: 508 ACVKLDKENKSAY--------------------------------TYLGLALS-SIGEYK 534
+ L + AY Y AL+ SI + K
Sbjct: 437 KAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQSINKQK 496
Query: 535 KAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
A + + AI ++ ++EA+ + + DL N +A E +L ID +F AY RG+
Sbjct: 497 YAALKDYTDAININPKYIEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGI 556
Query: 594 LLHGLGQHKKAIKDLS 609
G +K AI+D S
Sbjct: 557 HRFSFGDYKGAIEDYS 572
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASA 400
+L A ++ F + + K K D+ RG+A+V A
Sbjct: 372 LLNPQDGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGA 431
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I F + + P Y EA + RG R R + AI DF I+ NPS +A+ +R ++
Sbjct: 432 IGDFSKAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQS 491
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN---AAVEDLSACVKLDKENK 517
+ A++D + A+ P + RG V F D A ED + +++D +
Sbjct: 492 INKQKYAALKDYTDAININPKYIEAYLNRGDV---FSDLGNKIEATEDYNTILQIDPKFI 548
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+AY + G+ S G+YK A E + +A++LD N + A+ + Y +L N + A + Q
Sbjct: 549 AAYIHRGIHRFSFGDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQA 608
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ I+ + AY+ RG++ + AI D ++
Sbjct: 609 IAINANNALAYYNRGVIRTKQKNKQGAIADFKKAAK 644
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ L+RG + G A ++ IL+ DP + A I RG R + + AI D++E
Sbjct: 514 IEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGIHRFSFGDYKGAIEDYSE 573
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ +P+ A+ RG A LG A QD S+A+ N+A + RG++ K K+
Sbjct: 574 ALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQAIAINANNALAYYNRGVIRTKQKNKQ 633
Query: 501 AAVEDLSACVKL 512
A+ D KL
Sbjct: 634 GAIADFKKAAKL 645
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ L++ G+ + ++ AV+D + ++LD +N AY G +G+Y++A+
Sbjct: 308 NAQKELYQEGLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADS 367
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI L+ A+ + +L ++A+ Q + ++ + AY+ RGL L
Sbjct: 368 SQAILLNPQDGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKD 427
Query: 601 HKKAIKDLS 609
+K AI D S
Sbjct: 428 NKGAIGDFS 436
>gi|354604210|ref|ZP_09022201.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
12060]
gi|353347977|gb|EHB92251.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
12060]
Length = 673
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + + + K+ AI + +LK D E RG A+ +L A DF+ AI++NP
Sbjct: 44 GRSYIIDNKFRDAIETLNVLLKVDEKAYEGYFLRGIAKYNLDDLLGAEQDFSYAIENNPV 103
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ R R+ LG +A++D A++ P+ D RG+ + F AVED +
Sbjct: 104 FTAAYQYRAITRSRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFT 163
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY------ 561
++ D + AY G + + + +A E + AI+ +R A+ Y
Sbjct: 164 TFIRFDNKVVDAYVNRGTSYLMMKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKY 223
Query: 562 -QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ LA+ +K++EC D + +Y R L+ + + +AI+D S
Sbjct: 224 DEALADFDKSIEC-------DSTYIPSYFNRALVYSTINRPVQAIEDFS 265
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A F ++ +P++ A R R+ + A+ DF AI P
Sbjct: 77 RGIAKYNLDDLLGAEQDFSYAIENNPVFTAAYQYRAITRSRLGNYDDALKDFQVAIDLRP 136
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RG + +A++D + + F+ D RG KD A ED
Sbjct: 137 DRPDPYFSRGVTFLLSQQFEKAVEDFTTFIRFDNKVVDAYVNRGTSYLMMKDTTRAYEDY 196
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++E+ AY+ G+ + +Y +A K+I+ D ++ ++ + Y +
Sbjct: 197 NTAIRTNRESPLAYSRRGMLYMAQKKYDEALADFDKSIECDSTYIPSYFNRALVYSTINR 256
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+E +VL +D S Y R +L + +G + A+ D
Sbjct: 257 PVQAIEDFSRVLALDSTSSLTYFNRAILRNQIGDYNNALAD 297
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 375 KSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
K +++D R SRG+ + ++ A+ F ++ D +A + RGT+
Sbjct: 126 KDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFTTFIRFDNKVVDAYVNRGTSYLM 185
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ A D+ AI++N + A+ RRG A + EA+ D K++E +
Sbjct: 186 MKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKYDEALADFDKSIECDSTYIPSYF 245
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL--SSIGEYKKAEEAHLKAIQ 545
R +V A+ED S + LD + S+ TY A+ + IG+Y A + K
Sbjct: 246 NRALVYSTINRPVQAIEDFSRVLALD--STSSLTYFNRAILRNQIGDYNNALADYDKVAF 303
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N + + + Y+ L + A+ + + + F+ AY R L + L + +
Sbjct: 304 YSPNNVLLYYNRAALYRQLGDYYAAINDYTRAIELYPDFANAYLGRSALRYMLNDMQGSR 363
Query: 606 KD 607
D
Sbjct: 364 SD 365
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R I + G Y A+ F + P P+ RG ++ E A+ DFT I+ +
Sbjct: 111 RAITRSRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFTTFIRFDN 170
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG + + ++ A +D + A+ S RG++ K ++ A+ D
Sbjct: 171 KVVDAYVNRGTSYLMMKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKYDEALADF 230
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D +Y L S+I +A E + + LD + + + +
Sbjct: 231 DKSIECDSTYIPSYFNRALVYSTINRPVQAIEDFSRVLALDSTSSLTYFNRAILRNQIGD 290
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL +V + Y+ R L LG + AI D +
Sbjct: 291 YNNALADYDKVAFYSPNNVLLYYNRAALYRQLGDYYAAINDYT 333
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L RG ++ R+ +IS++T AI +PS + R ++ + + + +I + +
Sbjct: 493 QLLFKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQR 552
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA--LSSIGEY 533
+ + + A L ++ + D A+ DL+ +L E AY Y A L G
Sbjct: 553 ITVDNDPASQLKSNSSRSYNYDD---AIADLNKAARLFPE--FAYIYYNRANLLCRSGRI 607
Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
+A E + KAI+L+ +F EA+
Sbjct: 608 PEALEDYTKAIELNPSFAEAY 628
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RGI Q +Y +IS + + DP P I R T ++ +QR
Sbjct: 496 FKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQRITV 555
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ AI+D +A + P + R G EA++D +
Sbjct: 556 DNDPASQLKSNSSRSYNYDDAIADLNKAARLFPEFAYIYYNRANLLCRSGRIPEALEDYT 615
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E P+ A+ + RG+V KD D+S +L
Sbjct: 616 KAIELNPSFAEAYYNRGLVQIFLKDTRKGCLDMSKAGEL 654
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 8/232 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ + S + + GKY AI +D++++ D A +G+G A + E A+ F
Sbjct: 24 VKTNIYFSAAESAFDSGKYEDAIKYYDKVIEADSGNAMAYLGKGLALDALGKYEEALEFF 83
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSA---DILHERGIVNF 494
+AI+ N +A+ +G A+L E++++ KA E +P NSA D+ + G+ N
Sbjct: 84 DKAIEINKDLAKAYNAKGTTLASLERYEESLENFKKAAELKPKNSAYQNDVAY--GLNN- 140
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
F A++ +KL+ + AY+ G AL ++G+ +A E + KAI+L + A+
Sbjct: 141 -LGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + +E+A+E L +VL ID A +G L+ LG+++KAI+
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIE 251
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G++ AI ++ LK +P A +G A +L+ AI + +AI+ +P+ A+
Sbjct: 140 NLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ A +G++ EAI+ L K LE +P+ D + +G + + A+E +
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAI-- 257
Query: 513 DKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+K K Y Y+ +L +G+Y A E KAI+L+ F +++ + + + E+A
Sbjct: 258 EKYPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEYTFPDSYIWKAKILVEKGDIEEA 317
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + L I + S Y ++G + + +AIK
Sbjct: 318 RKSCDEFLAIAEDAS-VYDMKGQIYLHEYNYPEAIK 352
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G ++E Y AI +FD+ ++ DP Y ++ I + Q+ + I T+ P
Sbjct: 337 KGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLYLQKNYKECIEFATKVQTIFP 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
++ + G + + E +AI+ L KA E P IL + +D+ A E
Sbjct: 397 NSADIPWYIGDCYSIMMEPEKAIEYLKKAHELNPKDVGILTSIAWEYYSLEDYAKASE 454
>gi|456352577|dbj|BAM87022.1| conserved exported hypothetical protein [Agromonas oligotrophica
S58]
Length = 431
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 18/252 (7%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG QR L+ A++D+ +AI
Sbjct: 78 YRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYELRGVVYTGQRRLDRALADYDQAI 137
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A++D +A+ +P+ RG K + + A
Sbjct: 138 RLKPDYAQAYADRGVAFYLRGDNEKAVRDYDEAIRLDPDRPRTFTNRGAAYKKLGEMDKA 197
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D S ++ D + Y GL +++ +Y KA + +AI+L NFL G QF
Sbjct: 198 LADDSEAIRRDPKVPEYYDNRGLTHAAMKDYDKAIADYDQAIRLQPKPNFLTNRGDAYQF 257
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL------------ 608
+L + AL L +D F+ Y+ R +L +G+ KA+ D
Sbjct: 258 KNELGS---ALNDYDAALRLDPGFALTYNNRAVLFKKMGERAKALADYEAALRLDPGNEN 314
Query: 609 -SSGSRTMMPHL 619
+SG R MM +
Sbjct: 315 AASGRRVMMAEI 326
>gi|434394467|ref|YP_007129414.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428266308|gb|AFZ32254.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 256
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K I+ + ++G+ ++ + Y+ AI F Q L+ + + A + RG R + E AI
Sbjct: 66 TKEINAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAI 125
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+T A+QSNP+ + RG AR ALG+ AI D ++A++ P A +RG V +
Sbjct: 126 EDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQ 185
Query: 496 FKDFNAAVEDLSACVKLDKENKSAY 520
+ A+EDL+ ++++ E AY
Sbjct: 186 IGNIGKAIEDLNKAIQINPERAEAY 210
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E +G + Q++ AI F++A+Q N + A+ RG R L + AI+D + A
Sbjct: 72 EQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYTLA 131
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L+ PN A I + RG D+ +A+ D + +KL E+ Y+ G IG K
Sbjct: 132 LQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNIGK 191
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
A E KAIQ++ EA+ H Q + N + L+
Sbjct: 192 AIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQ 228
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + L+ +P + RG AR + ++AI+D+T+AI+ P + RG
Sbjct: 121 YEGAIEDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRG 180
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+G +AI+DL+KA++ P A+ R V+ KFK+ A ++D ++L E
Sbjct: 181 SVYLQIGNIGKAIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQLYTE 239
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAI 442
SRG A+V G Y SAI+ + Q +K +YPE G RG+ + AI D +AI
Sbjct: 144 SRGDARVALGDYQSAIADYTQAIK---LYPEDAFGYSDRGSVYLQIGNIGKAIEDLNKAI 200
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
Q NP EA+ R Q A +QD A++ +I+
Sbjct: 201 QINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQLYTEQGNIV 244
>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 471
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + + K A+ F++I+ P YP+A +G +LE A+ F +AIQ
Sbjct: 113 LLQGIVMLEQKKLEPALISFEKIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQY 172
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW R+G L + A+ KA+E EPN A+ +E+G +K + A+
Sbjct: 173 KPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIF 232
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + + A+ + G+AL +G ++ A KAIQ+ +F EA + L
Sbjct: 233 CFDKAIEYNHDLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSL 292
Query: 565 ANSEKALECLQQVLYIDKR 583
E ++ QVL +D +
Sbjct: 293 GQLEDTIDTFNQVLKLDPQ 311
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ GK A+S D ++ P Y +AL+ +G Q++LE A+ F + I P
Sbjct: 81 RGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFEKIILIKP 140
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW +G LG+ +A+ KA++++P + +GI F + +A+
Sbjct: 141 NYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLEQLESALICF 200
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ + + + G L + + + A KAI+ + + AW H DL N
Sbjct: 201 EKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLGN 260
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E AL C ++ + I FS+A + +L+ LGQ + I
Sbjct: 261 FESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTI 299
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + ++ A+ I++QIL+ P +AL+ RG A E A+ DF AI ++
Sbjct: 14 GVTLIELQRFEEALLIYNQILEYKPNLYDALVFRGMALQGLENFEEALIDFERAITNSSH 73
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG + LG+ EA+ L A+E +P+ L +GIV + K A+
Sbjct: 74 SHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFE 133
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
+ + A+ GL L +G+ + A KAIQ F AW +T F DL
Sbjct: 134 KIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLF--DLE 191
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E AL C ++ + I+ + ++ +G L + + + AI
Sbjct: 192 QLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAI 231
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + + SA+ F++ ++ +P +G +LE AI F +AI+ N
Sbjct: 183 KGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNH 242
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G A LG A+ KA++ +P+ ++ L + + + ++
Sbjct: 243 DLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTF 302
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD +N LG AL Y+ A A K I++D + A L
Sbjct: 303 NQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRR 362
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+E A+ L + + I+ + A+ + G +LH L ++++AI
Sbjct: 363 NEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEAI 401
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K AI FD+ ++ + A +G A E+A++ F +AIQ P EA R+
Sbjct: 226 KLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRK 285
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ +LG+ + I ++ L+ +P + + + G K + + A+ +++D
Sbjct: 286 AEILYSLGQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSH 345
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N +A+ + G L + + A A KAI+++ N+ AW L +E+A
Sbjct: 346 NYAAHCFRGYTLHKLRRNEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEA----- 400
Query: 576 QVLYIDK 582
+L+ DK
Sbjct: 401 -ILFFDK 406
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +Y AI FD++++ D A RG R E AI+ +AI+ NP+
Sbjct: 320 GTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRRNEDAIAALNKAIEINPN 379
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AWK G L + EAI KAL+ P+ +IL+++ + A+++L
Sbjct: 380 YDLAWKIYGSVLHKLKRNEEAILFFDKALDLSPDQPNILYDKACCYVALNKIDLAIQNLQ 439
Query: 508 ACVKLD 513
+ ++
Sbjct: 440 QAININ 445
>gi|365883408|ref|ZP_09422556.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
gi|365288132|emb|CCD95087.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
Length = 460
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG QR L+ A++D+ +AI
Sbjct: 107 YRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAI 166
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A+QD ++A+ +P+ R K + A
Sbjct: 167 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKA 226
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D ++ D + + GL S+G+Y KA + +AI+L NFL G QF
Sbjct: 227 LADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQF 286
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+L AL L +D F+ AY+ R +L +G+ KA+ D + R
Sbjct: 287 KNELG---AALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALR 336
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
+ D+++E +A + IS + + L RG+ + + A++ +DQ ++
Sbjct: 109 LRGDLMREAGGDAGKATADLSMAISLDPDDAEAYEL-RGVVYTGQRRLDRALADYDQAIR 167
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
P Y +A RG A + + E A+ D+ EAI+ +P + R A LG+ +A+
Sbjct: 168 LKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKAL 227
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D +A+ +P + RG+ D++ A+ D +KL + + T G +
Sbjct: 228 ADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKL-QPKPNFLTNRGDSHQF 286
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
E A + A++LD NF A+ + ++ + KAL + L +D A
Sbjct: 287 KNELGAALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAS 346
Query: 590 LRGLLL 595
R ++L
Sbjct: 347 GRRVML 352
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G Y AI+ +DQ +K P P L RG + F+ EL AA+SD+ A++ +
Sbjct: 246 NRGLTYQSLGDYDKAIADYDQAIKLQPK-PNFLTNRGDSHQFKNELGAALSDYDAALRLD 304
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ A+ R +GE +A+ D AL +P + + R ++ + K F A
Sbjct: 305 PNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKFGA 360
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 33/180 (18%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G A+ +++ ++ DP P R A +++ A++D EAI+ +P
Sbjct: 179 RGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDP 238
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA------------------------------- 475
E + RG +LG+ +AI D +A
Sbjct: 239 KVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQFKNELGAALSDYD 298
Query: 476 --LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
L +PN A + R ++ K + A+ D A ++LD N +A + + L+ I ++
Sbjct: 299 AALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKF 358
>gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 432
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + +G + I+ ++++ P Y EA G A + AI+++T AIQ
Sbjct: 100 ARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIK 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS G+ + RRG+A +A++D ++AL PN RG + KD+ A+ D
Sbjct: 160 PSEGDYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRD 219
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ N+ +Y Y G A G Y+KA + AIQL+ A+G Y+
Sbjct: 220 FTKSTDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQLNPAESAAYGSRGLAYEKSG 279
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG-SRTMMPHLIWNLT 624
EKA+ + + ++ A H R H G+ + I+D R L +N
Sbjct: 280 ELEKAIADYSRGIKLNPTNVIALHARAAAYHKQGKFDRVIEDYREAIKRKPTDSLSYNNL 339
Query: 625 RW-RNLCFNA 633
W + C NA
Sbjct: 340 AWLQATCENA 349
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
IL+ DP A RG A + + + A++D + ++ +PS ++ R G+
Sbjct: 53 ILELDPQDSYAYRHRGWAFSRKGDFLHALADMDKLVKLDPSNPWSYAARALVYRLKGDVQ 112
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
I DL++ ++ +P A+ ++ G+ K+++ A+ + + +++ YT G A
Sbjct: 113 NQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIKPSEGDYYTRRGRA 172
Query: 527 LSSIGEYKKAEEAHLK----AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
Y KAE+ LK A++L+ N A+ Q Y D + A+ + ++
Sbjct: 173 ----HWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKSTDLNP 228
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+Y RG + G ++KAI D SS
Sbjct: 229 TNELSYEYRGWAYYKSGAYEKAISDYSSA 257
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ RG A A+ F + L+ +P A RG +++ AI DFT++
Sbjct: 164 DYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKS 223
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
NP+ +++ RG A G +AI D S A++ P + RG+ K +
Sbjct: 224 TDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQLNPAESAAYGSRGLAYEKSGELEK 283
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
A+ D S +KL+ N A A G++ + E + +AI+
Sbjct: 284 AIADYSRGIKLNPTNVIALHARAAAYHKQGKFDRVIEDYREAIK 327
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P A++ RG A + G+ + A+ D+ K ++ +P++ R +V D
Sbjct: 54 LELDPQDSYAYRHRGWAFSRKGDFLHALADMDKLVKLDPSNPWSYAARALVYRLKGDVQN 113
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ DL+ + L A+ LG+A S+ Y +A + AIQ+ + + + + +
Sbjct: 114 QINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIKPSEGDYYTRRGRAH 173
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ AL+ + L ++ AY RG L + AI+D + +
Sbjct: 174 WYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKST 224
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 64/128 (50%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SAD +H+ +K D++ +E SA ++LD ++ AY + G A S G++ A
Sbjct: 26 SADNMHQAIEEAWKHHDYDLTIERCSAILELDPQDSYAYRHRGWAFSRKGDFLHALADMD 85
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K ++LD + ++ Y+ + + + L +V+ + +++A++ G+ L +
Sbjct: 86 KLVKLDPSNPWSYAARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNY 145
Query: 602 KKAIKDLS 609
+AI + +
Sbjct: 146 SQAITNYT 153
>gi|384217582|ref|YP_005608748.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
gi|354956481|dbj|BAL09160.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
Length = 287
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + +Y AI FD +K DP Y A + R A + + + A D+ EAI+
Sbjct: 111 NRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRLQ 170
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ AW R RA LG S EA++D +AL+ SA + RG+++ K +F AA++D
Sbjct: 171 PASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAIDD 230
Query: 506 LSACVKLDKENKSAYTYLGLA 526
++ ++ E SA GLA
Sbjct: 231 YNSALRAAPELASALFGRGLA 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 431 LEAAISDFTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
L+A I T IQ+ P + A + RG A A G+ AI D +++ P A
Sbjct: 50 LDARIGACTTFIQARPDSTAALAIAYNNRGNAYTAKGDYDSAISDFDQSIALNPTYAKAF 109
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ + + +++ A+E +KLD +A+ A ++++A + +AI+L
Sbjct: 110 NNRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRL 169
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AW L S +ALE + L + Y RGL+ +G+ AI
Sbjct: 170 QPASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAID 229
Query: 607 DLSSGSRTMMPHL 619
D +S R P L
Sbjct: 230 DYNSALRA-APEL 241
>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
Length = 468
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 363 KRNKKFCVTRISKSKSISVDFRL------SRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
K N +T + + + +D R +R +A V + + AI+ D LK +P
Sbjct: 38 KGNPDLAITHYTSALAKGLDSRFEAIVLQNRALAWVEKLSWQKAIADADAALKINPSSAT 97
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A R AR RE++ AI D++EAI+ P RG + A+QD AL
Sbjct: 98 AFAVRAEARKGLREIDRAILDYSEAIKLEPGDPIYLNNRGNLFDGQQKWDLALQDFDNAL 157
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P A L RG + A+ED +A ++LD +N AY GL +S+G+ ++A
Sbjct: 158 KIQPRYAHALAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNRGLTQASLGKREEA 217
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL-- 594
+ KAI L NF A+ + Y L ++ A Q L ID ++ A + R +L
Sbjct: 218 QADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRV 277
Query: 595 ----------------------LHGL----------GQHKKAIKDLSS 610
+H GQ +KA+ DL +
Sbjct: 278 AEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALADLDT 325
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K+ A+ FD LK P Y AL GRG AR + E A+ DF +I+ +P A+ R
Sbjct: 145 KWDLALQDFDNALKIQPRYAHALAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNR 204
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G +A+LG+ EA D +KA++ PN A + RG A D + +K+D
Sbjct: 205 GLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPA 264
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A + + G K A + I+L + + A+ + Y EKAL L
Sbjct: 265 YTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALADLD 324
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI--WN 622
+ + + + + + G+ +A+K+ ++ S +++P + WN
Sbjct: 325 TAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTAS-SLLPEDVETWN 372
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+ A + ++Q LK DP Y AL R R + L+ AI+DF+E I+
Sbjct: 237 NRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLR 296
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A G+ +A+ DL A++ P I ++ A+++
Sbjct: 297 PDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKE 356
Query: 506 LSACVKLDKENKSAYTYLGLALSS-----IGEYKKAEEAHLKAIQL 546
+ L E+ + +LG L S + + KA +A KA +L
Sbjct: 357 FTTASSLLPEDVETWNWLGRLLGSHPQSDLRDGAKAVQAATKACEL 402
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Q + GK A + F++ + P + A RG A + A +D+ +A++ +
Sbjct: 203 NRGLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKID 262
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A R R A G +AI D S+ + P++ + R K A+ D
Sbjct: 263 PAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALAD 322
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY---- 561
L +KL ++ + L +A + G + +A + A L +E W L +
Sbjct: 323 LDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTASSLLPEDVETWNWLGRLLGSHP 382
Query: 562 -QDLANSEKALEC 573
DL + KA++
Sbjct: 383 QSDLRDGAKAVQA 395
>gi|434387104|ref|YP_007097715.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018094|gb|AFY94188.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 267
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G +A AI+ +D I++ DP A GRG A A + AI F A+
Sbjct: 4 LDTGDRLLGAGNFAEAIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNI 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ AW RG A LGE +A+ AL+ +++ L+ RG+ + ++
Sbjct: 64 QPNEEMAWINRGTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLA 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
VK+D +N A+ G+ L+ + Y+ A + +A+ ++ + +AW T +L
Sbjct: 124 SYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNL 183
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ ++L ++ +A++ RG+ L L ++ +AI D
Sbjct: 184 ERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDF 227
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A KY AI FD L P A I RGTA E A++ F A++ N
Sbjct: 39 GRGLALARSAKYREAIESFDCALNIQPNEEMAWINRGTAFGILGEFTQALASFDLALKIN 98
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV-- 503
EA RG A LG + E++ +A++ + ++ H RG++ + + A+
Sbjct: 99 AYNSEALYGRGLALNQLGRNTESLASYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDC 158
Query: 504 -----------------------------EDLSAC---VKLDKENKSAYTYLGLALSSIG 531
E + C + L+ N A+ G+ALS +
Sbjct: 159 FDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLT 218
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
Y +A A+Q+D + AW
Sbjct: 219 RYDEAIIDFDLALQIDSGYYLAW 241
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 37/202 (18%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---- 424
C I ++ ++ ++RG A G++ A++ FD LK + EAL GRG A
Sbjct: 59 CALNIQPNEEMAW---INRGTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQL 115
Query: 425 -------RAFQREL-----------------------EAAISDFTEAIQSNPSAGEAWKR 454
+++R + + AI F A+ NP +AW+
Sbjct: 116 GRNTESLASYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQS 175
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R + L EAI + + L EPN+ + ++RGI ++ A+ D +++D
Sbjct: 176 RTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQIDS 235
Query: 515 ENKSAYTYLGLALSSIGEYKKA 536
A+ G AL + + +A
Sbjct: 236 GYYLAWKNRGYALDRLARHSEA 257
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR ++ +N +YA AI D++L +P PEA RG A + + AI DF A+Q +
Sbjct: 175 SRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQID 234
Query: 446 PSAGEAWKRRGQARAALGESVEAI 469
AWK RG A L EA+
Sbjct: 235 SGYYLAWKNRGYALDRLARHSEAL 258
>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
Length = 292
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ F + ++ DP A R A +AA+ DFT A+ ++
Sbjct: 75 TRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTAD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R + A+G A DLS+A+ P SA+ H RG+V AA+ D
Sbjct: 135 PNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGD 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G +L + +Y KA E A+ ++ ++W + Y+
Sbjct: 195 FDAAIDRNPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSG 254
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A+E Q+ ID+ + A G + G+
Sbjct: 255 RRQEAMESYQRATAIDQNNAVARQGLGRVQGGM 287
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+R + ++ +V G A VN I+ +++ +P P A RG A A
Sbjct: 31 TVSRATATRQFAVLETDKTGAADVN-------IASLTDVIQRNPSDPAAYNTRGAAYARA 83
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AI+DFT+A+Q +P++ A+ R A G + A+QD ++AL +PN +
Sbjct: 84 GNYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTADPNYSAAYIG 143
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + ++ AA DLS ++L E+ AY GL + G+++ A AI DR
Sbjct: 144 RANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAI--DR 201
Query: 549 NFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N + + + +A ++ KA+E L ++ + + ++ RG+ G+ ++A++
Sbjct: 202 NPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L+ ++ P+ + RG + ++ A+ D + V+LD + SAY+ LA
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G A + +A+ D N+ A+ + + N E A L Q + + ++AY
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
H RGL+ GQH+ AI D +
Sbjct: 176 HARGLVRQAQGQHRAAIGDFDA 197
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ L+ ++ + + +AY G A + G Y +A KA+QLD N A+ + Y+
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ AL+ + L D +S AY R L +G ++ A DLS R
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANLQRAMGNYEAAYSDLSQAIR 166
>gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 798
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF AI E + RG + L E EA+Q ++KA+E +PN + +ERG+++
Sbjct: 407 AIEDFDRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIH 466
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ +++ A++D ++LD E+ A +L L+ ++ EY+ A + + + I+LD N ++
Sbjct: 467 YRNSNYDLAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDS 526
Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + L + +L N +A+E +V+ ID AY G+ L +H+KAI
Sbjct: 527 YYNRALAEIEMELYN--EAIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAI 578
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + +I VD +RG++ N Y AI FD++++ P A RG ++++ + E
Sbjct: 72 INNTHNILVDTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYE 131
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I DF + ++ N EA G LG EAI++ AL + D + RG
Sbjct: 132 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHS 191
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D + V+L ++ +Y L +G Y+ A + KAI+LD N+
Sbjct: 192 KRYLNMYEEALSDFNKIVELRDDDSDSYYSKALTEFFLGLYEDAIKDFDKAIELDGNYSN 251
Query: 553 AWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ LT + Y+D + + +KALE + Y+ GLL + LG +K++I
Sbjct: 252 AYYFRGLTKNSLELYKDAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKESI 306
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y +I+ + +I++ D +Y + R A + E A+ D+ +AI+ NP
Sbjct: 293 GLLEYKLGNYKESINYYTKIIEINDDIYY-SYYNRALAEESLQLYEDALKDYNKAIELNP 351
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 352 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 411
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L + Y Y GL S + E +A + KAI+LD N++ A+ + +N
Sbjct: 412 DRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSN 471
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIK 606
+ A++ ++V+ +D A YHL L L +++ A+K
Sbjct: 472 YDLAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALK 511
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ + A+ ++ ++ DP Y A RG + AI DF +
Sbjct: 423 EFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKV 482
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + A + AL E A++ ++ +E +PN+ D + R + + + +N
Sbjct: 483 IELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDSYYNRALAEIEMELYNE 542
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + +D AY +G+ S+ E++KA + + K I+ D++ ++A+ +
Sbjct: 543 AIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSK 602
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+L +A E + L ID +++ AY+ G+ G + K + + +GS
Sbjct: 603 VELKLYNEAFEDYIRALEIDPKYANAYN--GI---GFSKTKYSNNEFKNGS 648
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ Y A+S F++I L++D ++ + F E AI DF +AI+
Sbjct: 188 RGHSKRYLNMYEEALSDFNKIVELRDDD--SDSYYSKALTEFFLGLYEDAIKDFDKAIEL 245
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNAA 502
+ + A+ RG + +L +A+ D KALE+ E N I ++ G++ +K ++ +
Sbjct: 246 DGNYSNAYYFRGLTKNSLELYKDAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKES 305
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + ++++ + +Y LA S+ Y+ A + + KAI+L+ ++ +
Sbjct: 306 INYYTKIIEINDDIYYSYYNRALAEESLQLYEDALKDYNKAIELNPEDTYSYNNRGLIKN 365
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ ++ALE + + +++ + Y+ R LL + +K+AI+D
Sbjct: 366 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 411
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ ++ L+ + E Y +A+ + ++++ DP P++ R A AI
Sbjct: 487 NESVYANYHLALSYDALEE--YETALKYYARVIELDPNTPDSYYNRALAEIEMELYNEAI 544
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF + I + + +A+ G +L E +AI +K +E + +S D + RG+ +
Sbjct: 545 EDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVE 604
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
K +N A ED +++D + +AY +G +
Sbjct: 605 LKLYNEAFEDYIRALEIDPKYANAYNGIGFS 635
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ + RG + L EAI+D K +E P ++ + RG + ++D
Sbjct: 81 DTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYEEGIKDFKKV 140
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLAN 566
++ ++++ A Y+GL +G Y++A + A+ LD +A+ GH ++ L
Sbjct: 141 LEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHSKRY---LNM 197
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL +++ + S +Y+ + L LG ++ AIKD
Sbjct: 198 YEEALSDFNKIVELRDDDSDSYYSKALTEFFLGLYEDAIKDF 239
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 127/316 (40%), Gaps = 33/316 (10%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y AI F ++++ D A + E E A+ + I+ +P
Sbjct: 462 RGLIHYRNSNYDLAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYARVIELDP 521
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +++ R A + EAI+D K ++ + D GI K+ A++
Sbjct: 522 NTPDSYYNRALAEIEMELYNEAIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCY 581
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ DK + AY GL+ + Y +A E +++A+++D + A+ + +N
Sbjct: 582 TKVIEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKYSN 641
Query: 567 SE-------KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+E +A++ L L Y+ +GL L K +L++ S + +
Sbjct: 642 NEFKNGSTQRAIDLLNDAL--------LYYEKGLAL-------KINDNLNNAS--IYDSM 684
Query: 620 IWNLTRWRNLCF------NAWPFIRRRLLCTRL---LKSTVSFAGLTLMEILIPSSRNIG 670
+ T+ N+ NA+ + LLC R L S + A ++ I I +
Sbjct: 685 GYTTTKLANIYLSMKDNDNAYKYYNNALLCFRYALKLNSKHTLAHNSIAYIYIQLDKMNN 744
Query: 671 AKDCIPRMYVKRFTDS 686
+ K F+D+
Sbjct: 745 KNNIFNEEAYKYFSDA 760
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
D + RG+ F K++ A++D ++L E +AY G + S +G+Y++ + K
Sbjct: 80 VDTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYEEGIKDFKK 139
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++ + + EA ++ Y L ++A++ L +D AY+ RG L ++
Sbjct: 140 VLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHSKRYLNMYE 199
Query: 603 KAIKDLS 609
+A+ D +
Sbjct: 200 EALSDFN 206
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LG+ EE + ++K
Sbjct: 85 NRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYEEGIKDFKK 139
>gi|404318522|ref|ZP_10966455.1| hypothetical protein OantC_10032 [Ochrobactrum anthropi CTS-325]
Length = 285
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D+++AIQ N
Sbjct: 76 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 136 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 195
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 196 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 255
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 256 KAKAANSYSRAVQLDPKYQPA 276
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 56 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + ++ +Y KA IQL+ + A+
Sbjct: 114 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 141
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFS 196
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++AI
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 201
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 202 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 261
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 262 SYSRAVQLDPKYQPA 276
>gi|384208546|ref|YP_005594266.1| hypothetical protein Bint_1063 [Brachyspira intermedia PWS/A]
gi|343386196|gb|AEM21686.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 424
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ G Y AI ++ L+ Y +A RGTA + AI DF +AI+ +
Sbjct: 210 NRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAIKDFDKAIELS 269
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A++ALG +AI+D +KA+ EP D + R I N AV+D
Sbjct: 270 PQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKD 329
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + +AY GL+ ++ +Y++A + + + I+L+ +A+ + +
Sbjct: 330 YDMVIELDNNHINAYYNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMG 389
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
E+A+ + + ID + KA
Sbjct: 390 LYEEAVRDYDKAIEIDPNYEKA 411
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA+ G + AI+ +++ ++ D Y E R + EAA+ D+ + I+ P+
Sbjct: 41 GIAKQALGLFEEAINYYNKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EAI+D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLAN 566
++LD AY +G A SIG Y++A + K I+L + N A+ + L
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGL 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+A+ + + L I ++ AY+ RG + L +K+AIKD + P +
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAIKDFDKAIE-LSPQYFY 274
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S ++D + R ++ KY AI + ++L+ D A G G A+ E AI+
Sbjct: 133 SNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITY 192
Query: 438 FTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ + I+ SN ++ A+ RG + LG EAI D++KALE D + RG +
Sbjct: 193 YNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNL 252
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + A++D ++L + AY G A S++G Y+ A E KAI ++ +++A+ +
Sbjct: 253 ELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYN 312
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ +A++ V+ +D AY+ RGL + L +++AIK+
Sbjct: 313 RAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKN 363
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G A+ + G Y AI+ ++++++ + A RG + AI D +A++
Sbjct: 177 GDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYD 236
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A L EAI+D KA+E P + RG + A+ED
Sbjct: 237 EYTDAYNNRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDF 296
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + AY +A +++G + +A + + I+LD N + A+ + Y +LA+
Sbjct: 297 NKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLAD 356
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A++ +V+ ++ + + AY+ RG + +G +++A++D
Sbjct: 357 YEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRD 397
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K I VD +R + N G Y +A+ +D++++ P + +A RG A+
Sbjct: 58 NKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGY 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------- 480
E AI D +AI + + +A+ R + + +EAI+D K LE +
Sbjct: 118 YEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIG 177
Query: 481 -------------------------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
NS+ + RG +N A+ D++ +++ E
Sbjct: 178 DAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDE 237
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G A ++ YK+A + KAI+L + A+ + L E A+E
Sbjct: 238 YTDAYNNRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFN 297
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + I+ ++ AY+ R + + +G H +A+KD
Sbjct: 298 KAISIEPQYIDAYYNRAIAKNNMGLHNEAVKD 329
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
G+ E ++ A +F + LKED E G A+ E AI+ + + I+
Sbjct: 4 FEEGLQLFRETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEV 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + E + R + LG A++D K +E P + +RG + A++
Sbjct: 64 DENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIK 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D+ + LD N AY +Y +A E + K ++LD + A+ + + +
Sbjct: 124 DIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSI 183
Query: 565 ANSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ +V+ + + S AY+ RG GLG + +AI D++
Sbjct: 184 GLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDIN 229
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +K+ SI +D +R IA+ N G + A+ +D +++ D + A RG +
Sbjct: 292 AIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSY 351
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
+ E AI ++ I+ N +A+ RG A+ ++G EA++D KA+E +PN
Sbjct: 352 YNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPN 407
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL+K I+D DKA++L P AY +G A SALG E+A+ + K
Sbjct: 244 NRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKA 299
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++K I + D A+ Y NRA C S L L++ ++D DK ++L PT +AY
Sbjct: 53 AINYYNKGIEV-DENYAELY-----YNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYD 106
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ +K
Sbjct: 107 DRGYAKGNLGYYEEAIKDIDKA 128
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +++KAI I + Y NRA + + LH ++D D ++LD + AY
Sbjct: 292 AIEDFNKAISIEPQYIDAYY------NRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYY 345
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G ++ L EEA+ +++
Sbjct: 346 NRGLSYYNLADYEEAIKNYDR 366
>gi|313203959|ref|YP_004042616.1| hypothetical protein Palpr_1485 [Paludibacter propionicigenes WB4]
gi|312443275|gb|ADQ79631.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 591
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP + RG A + + E A D ++AI+ N + A+ R + GE+ +A
Sbjct: 28 DPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGENEKAEV 87
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+ KA++ +PN + + RG+ K A+ED V+L + Y G+A + +
Sbjct: 88 EFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKL 147
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
E +KA + + ++LD N++ + + + L +KAL+ + + +D F+ AY
Sbjct: 148 DEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRN 207
Query: 591 RGLLLHGLGQHKKAIKDLSSG 611
RG+L +G + AI++
Sbjct: 208 RGILYFKIGNYDNAIENFQKA 228
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 363 KRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
++NK + KSIS+D L RG A E ++ A + ++ + A
Sbjct: 9 RKNKDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYA 68
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
R + E E A +F +AI +P+ A+ RG L + +AI+D KA+E
Sbjct: 69 YNLRARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVE 128
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PNSA I + RGI K + A+ D + ++LD Y G +GE KA
Sbjct: 129 LKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKAL 188
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+ + KAI+LD NF A+ + Y + N + A+E Q+ + +D+ F
Sbjct: 189 KDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIENFQKAISLDEGF 235
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + AI FD+ ++ P RG A E E A+ D+ ++ +
Sbjct: 105 ARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELD 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + RG LGE +A++D +KA+E + N A+ RGI+ FK +++ A+E+
Sbjct: 165 SNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIEN 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ LD+ K + LA I E ++ E++++
Sbjct: 225 FQKAISLDEGFKFLEDKIKLAQEKINEQRQFNESNVE 261
>gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
DSM 266]
Length = 243
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 92/164 (56%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q+++G Y SAI+ F + ++ DP EA RG+A+A + AI DF+ AI+ +P+A E
Sbjct: 37 QLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAE 96
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ R A+A++ + A +D A++ +P + + RG++ + ++ A+++ + +
Sbjct: 97 AYYNRAAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTAL 156
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+LD ++ AY + G A + +Y+ A E + A+ D + +
Sbjct: 157 ELDPKSAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVY 200
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ ++AI+ FT+AI+ +P + EA+ RG A+A G+ +AI+D S A+E +PN+A+ + R
Sbjct: 42 DYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAEAYYNR 101
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+D A ED +KLD + Y GL Y+ A + A++LD
Sbjct: 102 AAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDPK 161
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ H ++ + + A+E L D + + Y R L + ++ AIKD
Sbjct: 162 SAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYK 221
Query: 610 SGSR 613
++
Sbjct: 222 KAAK 225
>gi|334118605|ref|ZP_08492694.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333459612|gb|EGK88225.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 560
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 3/210 (1%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ FD+ +K + YPEA IGRG + R+ E AI+ F +A+Q NP+ EAW RG A
Sbjct: 284 AAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIA 343
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--- 515
A L EAI S AL+ E N + + RG K + + A+ + L E
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
G AL + Y++A A+ + +++ + EAW L E+AL
Sbjct: 404 TSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + + + RGL+L + + +A+
Sbjct: 464 RAITVWPDNYQGWVQRGLILGEMQNYSQAL 493
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R K S + + RG + AI+ FDQ ++ +P +PEA +GRG A A
Sbjct: 288 CFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIALAGL 347
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
+ AI ++ A+Q + EAW RG+A L + EAI K + ++ +
Sbjct: 348 ERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKV 407
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++G K + + AV + +K+ +N A+ G ALS + +Y++A ++ +AI
Sbjct: 408 GLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAIT 467
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + W ++ N +AL QV+ + +A+ RG +L L + + AI
Sbjct: 468 VWPDNYQGWVQRGLILGEMQNYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAI 527
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 35/194 (18%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA KYA A++ +D++L+ P EA +G A Q +AAI+ F AI+
Sbjct: 237 FNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA-DAAIACFDRAIKI 295
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW RGQ L ES +DF A+
Sbjct: 296 NSFYPEAWIGRGQ---TLSES-------------------------------RDFEGAIA 321
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+++ A+ G+AL+ + YK+A A+ A+Q++ NFLEAW + + L
Sbjct: 322 AFDQAVQINPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKL 381
Query: 565 ANSEKALECLQQVL 578
E+A+ C +V+
Sbjct: 382 QQYEEAIACFDKVI 395
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ ++ AI+ FD ++ + EA RG ++ EAA S + +A Q +P
Sbjct: 103 RGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQLHP 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W R+G EA+ +AL+ P + + RG+ K + + AV
Sbjct: 163 NLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSY 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---------- 556
++L +N A+ G+A + + +Y +A A+ + +Q+ N EAW +
Sbjct: 223 DRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA 282
Query: 557 ------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLRGL 593
+ FY Q L+ S E A+ Q + I+ F +A+ RG+
Sbjct: 283 DAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGI 342
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHL-IWNL 623
L GL ++K+AI S+ + L WNL
Sbjct: 343 ALAGLERYKEAIIAYSNALQIEGNFLEAWNL 373
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
RG A +Y AI+ FD+++ E + + + +G A + E A++ + ++
Sbjct: 374 RGEALEKLQQYEEAIACFDKVISLTSEAEITSKVGLQQGAALEKLQRYEEAVAAYNRVLK 433
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW +RG A + L + +A+ +A+ P++ +RG++ + ++++ A+
Sbjct: 434 IVPDNFEAWLKRGNALSKLQQYEQALASYDRAITVWPDNYQGWVQRGLILGEMQNYSQAL 493
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L +N A+ G L + + A ++ A+++ ++ EA
Sbjct: 494 VAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEA 543
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V ++ I+ L +G A +Y A++ ++++LK P EA + RG A + +
Sbjct: 394 VISLTSEAEITSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQ 453
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A++ + AI P + W +RG + +A+ + ++ +P++ + +R
Sbjct: 454 QYEQALASYDRAITVWPDNYQGWVQRGLILGEMQNYSQALVAFDQVIQLKPDNWEAWAQR 513
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G V K + A+ +++ + A
Sbjct: 514 GDVLQKLQRTQDAISSYGVALEIKPDYYEA 543
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 68/174 (39%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA+ + +A+Q P AW G+A L E + +A P RG
Sbjct: 46 EAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEYWAWMLRGT 105
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ + A+ ++++ E A+ G L + +++ A + KA QL N
Sbjct: 106 GLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQLHPNLP 165
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W +A+ ++ L + +A+ RGL L ++ +A+
Sbjct: 166 AMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAV 219
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ K + + L RG A +Y A++ +D+ + P + + RG +
Sbjct: 430 RVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITVWPDNYQGWVQRGLILGEMQNY 489
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A+ F + IQ P EAW +RG L + +AI ALE +P+ + L R
Sbjct: 490 SQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSR 547
>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [methanocaldococcus infernus ME]
gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
Length = 534
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G+ NEG+Y AI FD+ +K DP P A + + E AI F +AI+ +
Sbjct: 8 EKGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLD 67
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW + + L +AI+ KA++ +PN+ + + +K + + A+E
Sbjct: 68 PNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIEC 127
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KLD N +A+ Y G+ L+ +G++++ + + KA L
Sbjct: 128 FDKAIKLDPNNPAAWYYKGIILAKLGKHEEESKKYEKA--------------------LD 167
Query: 566 NSEKALECLQQVLYIDKRF 584
++A+EC ++VL ID F
Sbjct: 168 KYKEAIECFKKVLEIDPNF 186
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +G G +AI+ KA++ +PN+ + + +K + + A+E +K
Sbjct: 6 YYEKGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIK 65
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD N +A+ Y +L + Y+KA E KAI+LD N AW + L EKA+
Sbjct: 66 LDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAI 125
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
EC + + +D A++ +G++L LG+H
Sbjct: 126 ECFDKAIKLDPNNPAAWYYKGIILAKLGKH 155
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E+G+ + + A+E +KLD N +A+ Y +L + Y+KA E KAI+L
Sbjct: 7 YEKGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKL 66
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D N AW + L EKA+EC + + +D A++ + L+ L +++KAI
Sbjct: 67 DPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAI 125
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
DS Y+L + K I D+ +++D +A + + L L + KAI D +
Sbjct: 45 DSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKAD--SLYKLERYEKAIECFDKAIKL-- 100
Query: 68 EIQDICNRAFCYSQ------LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
D N A Y + LE ++ I DKA++LDP A+ KG + LG+ EE
Sbjct: 101 ---DPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKGIILAKLGKHEE 157
Query: 122 ALSVWEKGYEHALHQSADLKQFLELE 147
+EK + K+ LE++
Sbjct: 158 ESKKYEKALDKYKEAIECFKKVLEID 183
>gi|428312302|ref|YP_007123279.1| hypothetical protein Mic7113_4172 [Microcoleus sp. PCC 7113]
gi|428253914|gb|AFZ19873.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 270
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++N G Y AI+ FDQ L+ D + RG A E AI+D+TEAI+ N
Sbjct: 50 NRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIRLN 109
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L ++I D +KA+E +S + RG + + + +AA+ D
Sbjct: 110 PKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAALAD 169
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQF--- 560
+ L+ + A+ GL + + +++ A + + +AI++ F EA+ + L++F
Sbjct: 170 YEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLK 229
Query: 561 -YQD-LANSEKALECLQQ 576
YQD +A+ +KA E +Q
Sbjct: 230 NYQDAIADLKKAAELFKQ 247
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A G Y AI+ + + ++ +P + +A RG + + +I+D T+
Sbjct: 79 ADTYYNRGYAYHTIGSYEKAITDYTEAIRLNPKFAQAYSNRGYTYFVLKNYQQSIADATK 138
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ N S+ A+ RG A LG A+ D KAL PNSA + RG+ +
Sbjct: 139 AIELNQSSDNAYVSRGNAHDELGNHDAALADYEKALSLNPNSARAFYNRGLTRNRLNQHQ 198
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+A++D S +++ E AY GL+ ++ Y+ A
Sbjct: 199 SAIQDYSQAIRIQPEFAEAYYNRGLSRFTLKNYQDA 234
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + AI+DF +A+Q + + + RG A +G +AI D ++A+
Sbjct: 48 LYNRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIR 107
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P A RG F K++ ++ D + ++L++ + +AY G A +G + A
Sbjct: 108 LNPKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAAL 167
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ KA+ L+ N A+ + L + A++ Q + I F++AY+ RGL
Sbjct: 168 ADYEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFT 227
Query: 598 LGQHKKAIKDL 608
L ++ AI DL
Sbjct: 228 LKNYQDAIADL 238
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 20 ICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSYEIQDICN 74
I + D+ +++DS A R ++ ++++AIR L+ AQ+Y N
Sbjct: 65 IADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIR-LNPKFAQAY-----SN 118
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
R + Y L+ ++ I D KA++L+ + AY+ +G A LG + AL+ +EK
Sbjct: 119 RGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAALADYEK 172
>gi|153008723|ref|YP_001369938.1| hypothetical protein Oant_1392 [Ochrobactrum anthropi ATCC 49188]
gi|151560611|gb|ABS14109.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 301
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D+++AIQ N
Sbjct: 92 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 151
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 152 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 211
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 212 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 271
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 272 KAKAANSYSRAVQLDPKYQPA 292
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 72 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 129
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + ++ +Y KA IQL+ + A+
Sbjct: 130 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 157
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFS 212
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++AI
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 217
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 218 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 277
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 278 SYSRAVQLDPKYQPA 292
>gi|436735950|ref|YP_007318078.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267551|gb|AFZ33495.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 222
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 82/161 (50%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S + ++ Q+ G + AI F Q+++ +P Y EA RG A AF + + AI
Sbjct: 31 AESTQAENLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAI 90
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
F +AI+ +P+ +A+ R G A A++G+ AI+ + L PN D + RG+ ++
Sbjct: 91 EGFRQAIEIDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYS 150
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ AVED + ++L+ AY GLA ++ A
Sbjct: 151 LNNHEQAVEDFTQVIQLEPALAQAYGRRGLAYYALSNRSAA 191
Score = 82.8 bits (203), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L + + + + + AI DF++ I+ NP EA+ RG A A LG+ EAI+ +A
Sbjct: 37 ENLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIEGFRQA 96
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E +PN D AY G AL+S+G+ +
Sbjct: 97 IEIDPNHVD----------------------------------AYARWGTALASVGDLQG 122
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A E + ++L NFL+A+ + + L N E+A+E QV+ ++ ++AY RGL
Sbjct: 123 AIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAVEDFTQVIQLEPALAQAYGRRGLAY 182
Query: 596 HGLGQHKKAIKDLSSGS 612
+ L AI DL +
Sbjct: 183 YALSNRSAAISDLQQAA 199
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G Y AI F Q ++ DP + +A GTA A +L+ AI F E ++ P
Sbjct: 76 RGLAYAFLGDYQEAIEGFRQAIEIDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAP 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG A +L +A++D ++ ++ EP A RG+ + + +AA+ DL
Sbjct: 136 NFLDAYYNRGLAHYSLNNHEQAVEDFTQVIQLEPALAQAYGRRGLAYYALSNRSAAISDL 195
Query: 507 SACVKLDKENKSAYTY 522
L ++ Y
Sbjct: 196 QQAATLFQQQGDRVGY 211
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 69/131 (52%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
E A+ L + + +F A++D S ++L+ + AY GLA + +G+Y++A E
Sbjct: 32 ESTQAENLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIE 91
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+AI++D N ++A+ + + + A+E + L + F AY+ RGL + L
Sbjct: 92 GFRQAIEIDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSL 151
Query: 599 GQHKKAIKDLS 609
H++A++D +
Sbjct: 152 NNHEQAVEDFT 162
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 46/95 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD G A + G AI FD+ L+ P + +A RG A E A+ DFT+
Sbjct: 104 VDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAVEDFTQ 163
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
IQ P+ +A+ RRG A AL AI DL +A
Sbjct: 164 VIQLEPALAQAYGRRGLAYYALSNRSAAISDLQQA 198
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ + + +R+ + L Y NR + L H+ + D + +QL+P L QAY
Sbjct: 123 AIEKFDETLRLAPNFLDAYY------NRGLAHYSLNNHEQAVEDFTQVIQLEPALAQAYG 176
Query: 108 LKGCAFSALGRKEEALS--------VWEKGYEHALHQSADLKQFLE 145
+G A+ AL + A+S ++G Q+ DL Q ++
Sbjct: 177 RRGLAYYALSNRSAAISDLQQAATLFQQQGDRVGYQQTLDLIQIIQ 222
>gi|428779089|ref|YP_007170875.1| hypothetical protein Dacsa_0762 [Dactylococcopsis salina PCC 8305]
gi|428693368|gb|AFZ49518.1| tetratricopeptide repeat protein [Dactylococcopsis salina PCC 8305]
Length = 201
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 81/149 (54%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+S K V +++G V G Y SAI FDQ+L D + +AL RG AR+ +
Sbjct: 40 LSPEKEKEVKTLMTQGNQNVASGNYESAIEAFDQVLAIDKNHVQALTQRGVARSRSEDYS 99
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++D+ A+ + A E + RG +A L + AI+D +KA+E +P+ A + RG
Sbjct: 100 GALADYNRALAVDSEAYEVYYNRGIVQARLEDHESAIEDFTKAIERKPDFAPAIGNRGFA 159
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+ + +++ AA+EDL +L KE+ + T
Sbjct: 160 HAELENYIAAIEDLETAAELFKESGNKRT 188
Score = 45.8 bits (107), Expect = 0.082, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A G AI+ + L + N L +RG+ + +D++ A+ D + + +D
Sbjct: 54 QGNQNVASGNYESAIEAFDQVLAIDKNHVQALTQRGVARSRSEDYSGALADYNRALAVDS 113
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E Y G+ + + +++ A E KAI+ +F A G+ + +L N A+E L
Sbjct: 114 EAYEVYYNRGIVQARLEDHESAIEDFTKAIERKPDFAPAIGNRGFAHAELENYIAAIEDL 173
Query: 575 Q 575
+
Sbjct: 174 E 174
>gi|425456550|ref|ZP_18836258.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
gi|389802328|emb|CCI18610.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
Length = 707
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W L +ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + +FS+A++ +G++L LG+ +A++ + ++
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKA 566
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G +L + + +A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E Q + + +A+ +G LLH + + ++AI R
Sbjct: 558 EAFTQATKANSNYYQAWLHQGALLHQMERFQEAIASYEKARR 599
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW H +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLHQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLS------SGSRTMMPHLIWNLTRWRNL 629
G LGQ+++AI+ S R + TRW+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQEL 689
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ + + + F T+ +K+
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L +G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705
>gi|334120282|ref|ZP_08494363.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333456629|gb|EGK85259.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 406
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + EG + A+ FD+ +K +P Y +A R + R + AI D+T+AI NP
Sbjct: 155 GIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHELGDDAGAIEDYTKAILLNPD 214
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
G + A D ++A + A + RG + D A++D +
Sbjct: 215 RAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNNRGFARLRLGDLQGALKDFT 274
Query: 508 ACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + A+ G + +G+ KA + + +A +L+ N + + +L + L N
Sbjct: 275 QAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLNPNNPKTFYYLGVIHSRLGN 334
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EKALE + + + + F++AY RG++ + LG +KA D
Sbjct: 335 KEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANVDF 376
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ +++ P+ E G +A + + E A+ +F AI+ NP +A+ R R L
Sbjct: 136 LLERVRSNSPLCAEDFNKLGIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHEL 195
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI+D +KA+ P+ A + GI+++ D+ A D + +L+ + AY
Sbjct: 196 GDDAGAIEDYTKAILLNPDRAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNN 255
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ-FYQDLANSEKALECLQQVLYID 581
G A +G+ + A + +AI+L+ + AW + ++ L + KAL+ Q ++
Sbjct: 256 RGFARLRLGDLQGALKDFTQAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLN 315
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
K ++ G++ LG +KA++D +
Sbjct: 316 PNNPKTFYYLGVIHSRLGNKEKALEDFT 343
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQS 444
+RG A++ G A+ F Q ++ + A RG + ++ A+ D+T+A +
Sbjct: 255 NRGFARLRLGDLQGALKDFTQAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARL 314
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ + + G + LG +A++D +KA+E + + A+ RGIV+++ D A
Sbjct: 315 NPNNPKTFYYLGVIHSRLGNKEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANV 374
Query: 505 DL 506
D
Sbjct: 375 DF 376
>gi|395531632|ref|XP_003767879.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2
[Sarcophilus harrisii]
Length = 806
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQR 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALILNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 359
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+SD T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVSDLTKAIQLQPSA-RLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ +A+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +G + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIK 353
>gi|427419274|ref|ZP_18909457.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425761987|gb|EKV02840.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 510
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG G A+ F++ + D EA R A + +AAI+D + +
Sbjct: 261 INRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTL 320
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A+ RGQ A+ + +AI D SK LE P+SA+ + RG + + AA+
Sbjct: 321 EPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAIS 380
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + LD E+ +Y Y G A + +G+ A + AI L+ + A+ + + +
Sbjct: 381 DYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINLNSAYWNAYASRGRMHYES 440
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A V+ + + ++ RG+ +G + A+ DL
Sbjct: 441 GDYQSAYTDFSAVITANVLDADVFYYRGITNARMGNRRAAVTDL 484
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + + + ++ DF L RG A +A+ ++Q + D Y A + R
Sbjct: 102 NDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAISIDANYSTAYLNR 161
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + A +DF I ++P + A+ G + G A++ L+ A++ +P+
Sbjct: 162 GILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIALEYLNDAVQLDPS 221
Query: 482 SADILHERGIVNFKFKDFNA---AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+A RG+V FK N+ A+ D + ++LD +N + + G ++G+ ++A +
Sbjct: 222 NASAYFHRGLV---FKALNSPASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQ 278
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+AI +D N +EA+ + + A + A+ L QVL ++ + AY +RG +
Sbjct: 279 DFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASS 338
Query: 599 GQHKKAIKDLS 609
AI D S
Sbjct: 339 SNTADAINDFS 349
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R + G+ + +G +AI F+ + P + + + RG A A EAA+ ++ +AI
Sbjct: 90 RFNEGLEEYQDGNDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAIS 149
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ + A+ RG LG + A D + + +P SA+ G++ + + A+
Sbjct: 150 IDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIAL 209
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E L+ V+LD N SAY + GL ++ A ++I+LD + + + Y
Sbjct: 210 EYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRGATYYT 269
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++ +AL+ + + ID+ +AY+ R L + + AI DL+
Sbjct: 270 VGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLN 315
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS+D L+RGI + G+ A + F++ + DP A I G + Q
Sbjct: 145 NQAISIDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGN 204
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+ +A+Q +PS A+ RG AL AI D ++++E + ++A RG
Sbjct: 205 QQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRG 264
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D A++D + + +D+ N AY AL S + A + + L+
Sbjct: 265 ATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGN 324
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ Q + +N+ A+ +VL + ++AY+ RG G+ + AI D ++
Sbjct: 325 ADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTA 384
Query: 611 G 611
Sbjct: 385 A 385
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAI 401
+ E + EA N+ F + ++ ++ D L RG + A AI
Sbjct: 286 IDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAI 345
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ F ++L+ P EA RG A E +AAISD+T A+ +P ++K RG A A
Sbjct: 346 NDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFAD 405
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG+S A+ D S A+ + RG ++++ D+ +A D SA + + + +
Sbjct: 406 LGDSFSALSDYSTAINLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFY 465
Query: 522 YLGLALSSIGEYKKA 536
Y G+ + +G + A
Sbjct: 466 YRGITNARMGNRRAA 480
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ +G A+ + ++ DP A RG +AISDFT++I+ +
Sbjct: 196 GLIASEQGNQQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDD 255
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG +G++ EA+QD ++A++ + N+ + + R AA+ DL+
Sbjct: 256 NAATFINRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLN 315
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ N AY G +S A K ++L + EA+ Y +
Sbjct: 316 QVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQ 375
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ A+ L +D + +Y RG LG A+ D S+
Sbjct: 376 QAAISDYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTA 419
>gi|406880258|gb|EKD28661.1| hypothetical protein ACD_79C00251G0007 [uncultured bacterium]
Length = 308
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + F LS +Q S+I + +K +P +A RG AR Q + AI DF
Sbjct: 13 ICLVFNLSFLFSQ-------SSIEYHTRDIKINPKDSDAYFSRGFARLVQGLCDDAILDF 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T+AI +P+ + RG+ + ++A+ D +KA+ N R FK +
Sbjct: 66 TQAILISPNEALTYFFRGRCKFMKTYYLDALNDFTKAIALNKNYLAAYFFRAKCKFKMNE 125
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
FN A+ED+ ++L +EN Y + L+S+ +Y AE+ +LKAI LD+ A+ +L
Sbjct: 126 FNKALEDIDKTLELSQENADLYAWKAYVLNSLKDYSAAEKLYLKAIDLDKTCHFAYNNLA 185
Query: 559 QFY-----QDLANSEKALECLQQVLYIDKR 583
Y + L N KA+ ++ + + K+
Sbjct: 186 WIYTACENKQLINIPKAISLSKEAVKLQKK 215
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ D RG+ V +Y AI+ F++IL +DP + EAL RG A + + A+ F
Sbjct: 3 ITNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSF 62
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+A+Q P +A R+G AALG EA++ ALE P++ +I + G+ + +
Sbjct: 63 NDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEMER 122
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A++ ++L E +A +G Y++A E +A+++ EAW
Sbjct: 123 AEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKG 182
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E ALEC ++ + + A + L+L LG++++A+ L
Sbjct: 183 LILAKIEKYENALECFDFLIREKPKDTAALEQKCLILANLGKNEEALGAL 232
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI +Y A ++LK +P + EA +G A L AI F EAI+ +P
Sbjct: 249 KGILLSELSRYEDAERTISKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDP 308
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW + A L EA++ LE P+ +I + R + K ++F A
Sbjct: 309 AYFEAWNYKCFALMKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSF 368
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +LD N A+ G L+ G+Y++A E + ++ +F EA L
Sbjct: 369 ARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGR 428
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
E+ALE L + L + + +GLLL +G+ + A++ + +
Sbjct: 429 FEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAA 474
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ FD IL+ P E R A + A F + +P +AW ++G
Sbjct: 327 YEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQG 386
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A G+ EA++ + LE+ P+ + RG V F A+E L+ ++ + EN
Sbjct: 387 RLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPEN 446
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + GL L IG+++ A EA A L + W + L E+ALE ++
Sbjct: 447 YNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKE 506
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQ 600
L+++ K ++ +G++L LG+
Sbjct: 507 GLHLNPYLEKGWNKKGIVLGKLGK 530
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 4/238 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ K+ +D +RGI+ + G+ +A+ ++++ P YP+ G A
Sbjct: 571 AFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMEL 630
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
ELE A+ F + NP E R+G+ LGE A+Q K L +P S + +
Sbjct: 631 GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYR 690
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY----TYLGLALSSIGEYKKAEEAHLKAI 544
+G+ + F AV+ + + +Y T G A +G + A E A+
Sbjct: 691 KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+ + + W + Q+L E+A + L ++ FS A+ R + L GQ++
Sbjct: 751 EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYE 808
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
N GK A+ + LK+ P AL +G + E A ++ ++ NP EA
Sbjct: 220 ANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPGHREA 279
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W R+G A L EAI+ +A+ +P + + + K + + A+E ++
Sbjct: 280 WFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILE 339
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + + LAL + + +A + + +LD +AW + E+AL
Sbjct: 340 TYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEAL 399
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E ++L F++A RG +L GLG+ ++A++ L+
Sbjct: 400 ETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLT 437
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
R+++ + D +G GKY A+ FD++L+ P + EA RGT
Sbjct: 368 FARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLG 427
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A+ T++++ P W ++G +G+ A++ A +P+ R
Sbjct: 428 RFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNR 487
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + + A+E + L+ + + G+ L +G+ ++A EA +A++L +
Sbjct: 488 GFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKLRPD 547
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F +AW ++ EKA E +VL + A + RG+ L LG+++ A++ L
Sbjct: 548 FEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYL 606
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPM-----YPEALIGRGTARAFQRELEAAISDFTEAI 442
G+AQ+ +Y A F++IL+++P Y L+ RG + E A+ F +A+
Sbjct: 1462 GLAQLKTRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQN-----EEAVEVFEKAL 1516
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A +++G AL EA AL P + DIL+ R + ++K DF A
Sbjct: 1517 ELNPALTAALEQKGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVASYKLLDFEEA 1576
Query: 503 VEDLSACV----KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+DL + K+ Y LG+A + +Y++A +A ++ + +A ++
Sbjct: 1577 SKDLERLLLFAPGFPDYTKACYM-LGIASIELQDYERALQALDLVLEREPAHRDALYNMA 1635
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L E+A +Q+L ++ + GL L L K+A+K
Sbjct: 1636 LVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALK 1683
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A + + A F ++ + DP +A +G A + E A+ F ++ +
Sbjct: 350 NRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYH 409
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA K RG LG EA++ L+K+LE EP + ++ ++G++ F A+E
Sbjct: 410 PDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEA 469
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +++ + G AL S+ Y++A EA + + L+ + W L
Sbjct: 470 FENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLG 529
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+E+ALE ++ + + F A+ GLLL +++KA
Sbjct: 530 KTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKA 568
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 3/238 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A V + AI FD+ ++ DP Y EA + A E A+ F +++ P
Sbjct: 283 KGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILETYP 342
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E W R A L EA + ++ E +P + D ++G + + + A+E
Sbjct: 343 DMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETF 402
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + A + G L+ +G +++A E+ K+++ + W D+
Sbjct: 403 DRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGK 462
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI--WN 622
E ALE + + + RG L+ L +++A++ G + P+L WN
Sbjct: 463 FEPALEAFENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLH-LNPYLEKGWN 519
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ P EA +G A + E A+ F I+ P A +++
Sbjct: 156 RYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQK 215
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG++ EA+ L L+ P + L+ +GI+ + + A +S +KL+
Sbjct: 216 CLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPG 275
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ A+ G AL + +A EA +AI+LD + EAW + L E+ALE
Sbjct: 276 HREAWFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFD 335
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+L + ++ R L L L +A + +
Sbjct: 336 TILETYPDMEEIWYNRALALLKLQNFPEAARSFA 369
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 37/254 (14%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQI-------------------LKEDPMYPEALIGRGT 423
FRL GI G+Y A +F+ I K+ P+Y +G
Sbjct: 870 FRL--GIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESENSHKDSPLY-----WKGL 922
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--- 480
Q E A+ F++ + NP E W G + + LG+ EA + L KALE +P
Sbjct: 923 MFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFR 982
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN--------KSAYTYLGLALSSIGE 532
+ DI + G+ F+ +F A++ + EN + L+L +G
Sbjct: 983 DLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPDEAQDIMYKKSLSLLRLGR 1042
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y +AE + + LD EA HL+ + ++ALE ++VL + +G
Sbjct: 1043 YAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVLSQNPARKTILFRKG 1102
Query: 593 LLLHGLGQHKKAIK 606
L L G++ +A++
Sbjct: 1103 LALKAFGKNLEALE 1116
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 19/249 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQIL----KEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+G+A +N ++ A+ FD+++ +DP Y +A +G A+ A+ F A+
Sbjct: 691 KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP +G W +G L EA + AL P +D R + FK + A
Sbjct: 751 EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYETA 810
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E L A ++ D EN S + +G +K+A EA ++++ E T+F
Sbjct: 811 LEALEALLENDPENLSTLNSRAICFLELGRHKEAVEALSNLLEINPEREE-----TKFRL 865
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWN 622
D A +E + R+ +A+ L G+ + KA +SG + H
Sbjct: 866 DEAKFRLGIEYFEL-----GRYDEAFP----LFEGINEEVKAKNGEASGEESENSHKDSP 916
Query: 623 LTRWRNLCF 631
L W+ L F
Sbjct: 917 LY-WKGLMF 924
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G+ ++ GK+ A+ F+ P + RG A E A+ F E +
Sbjct: 451 IQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHL 510
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W ++G LG++ EA++ +A++ P+ D G++ F +++ A E
Sbjct: 511 NPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEE 570
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K + E+ A G++L +G + A E K + L ++ + L +L
Sbjct: 571 AFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMEL 630
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EKALE +++ + + +G L LG+H+ A++
Sbjct: 631 GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQ 672
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ N +Y A F+Q+L+ P PE+L G +L+ A+ F +A NP
Sbjct: 1635 ALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPK 1694
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA L E++ + LE P + D ++ +G+ + + A++
Sbjct: 1695 NEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFD 1754
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K D N A +G+ Y+ A A +A+ ++ + +L +
Sbjct: 1755 NVLKKDPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAKTGDY 1814
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E AL+ +++L I + +A + RG+LL L ++ +AIK
Sbjct: 1815 EDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGEAIK 1853
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
S GIA + GK A +F +IL+ P + +A G+G Q + A+ F +A+
Sbjct: 1373 SAGIALMGLGKQEEAFEVFSEILEVYPDFKKAWYGKGLVLFSQERYDEALEAFEQALMES 1432
Query: 444 -----------------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
S+P +AW + G A+ +A K LE P AD+
Sbjct: 1433 PYEVAKIEESEIEKSKISDPELEDAWTKIGLAQLKTRRYEDAFDTFEKILEKNPTDADVW 1492
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G+V AVE ++L+ +A GL L ++ Y++A +A A+ L
Sbjct: 1493 YLSGLVMRGLDQNEEAVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALAL 1552
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKK 603
+ ++ L + E+A + L+++L F +KA ++ G+ L +++
Sbjct: 1553 NPENVDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYMLGIASIELQDYER 1612
Query: 604 AIKDL 608
A++ L
Sbjct: 1613 ALQAL 1617
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A + Y A+ F + L +P + +G + E A+ F EA++
Sbjct: 485 MNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKL 544
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AWK G A E +A + ++ L+ P D L+ RGI + A+E
Sbjct: 545 RPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALE 604
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L V L + LG+AL +GE +KA E K + LE + +L
Sbjct: 605 YLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMEL 664
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E AL+ ++VL +A++ +GL L + + + A+K
Sbjct: 665 GEHETALQAFEKVLLEKPGSREAWYRKGLALLNMERFEDAVK 706
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 8/246 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + ++ + G+YA A S F ++L DP EAL TA + + A+ F
Sbjct: 1028 DIMYKKSLSLLRLGRYAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERV 1087
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP+ R+G A A G+++EA++ L+ +P+ L ++G F+ + +
Sbjct: 1088 LSQNPARKTILFRKGLALKAFGKNLEALEAFDLVLKLKPDCTYALDQKGYTLFELEKYEE 1147
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQ 559
A E A ++ +N LAL + +K+A + KA L + + + L+
Sbjct: 1148 AAEAFKAALEYSPKNADMQYLRALALFRLRNFKEAMQEFEKAFDLGCRKPEISYYTGLSC 1207
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
F + + A++ VL + + R L L LG+ ++A+ S +++
Sbjct: 1208 F--ETGDYAGAIKAFDIVLRAGIQEPEILQKRALALFELGKAEEAV----SAVNSLLEFS 1261
Query: 620 IWNLTR 625
NLTR
Sbjct: 1262 AENLTR 1267
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
L D +++ K+++ + K+ ++ + + K + ++E+ R + IS
Sbjct: 1675 LEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDR-----ILEISPEN 1729
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+++++ G+A +Y A+ FD +LK+DP +A+ G Q+ E A
Sbjct: 1730 YDAMNYK---GVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLYETAARA 1786
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F EA+ NP + + G + A G+ +A++ K L +P ++ RG++ K +
Sbjct: 1787 FKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLE 1846
Query: 498 DFNAAV 503
+ A+
Sbjct: 1847 KYGEAI 1852
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 4/224 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI GK A+ F++ +K P + +A G E E A F E +++NP
Sbjct: 521 KGIVLGKLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNP 580
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A RG + LG + A++ L K + P+ D+ + G+ + + A+E
Sbjct: 581 EDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETF 640
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ E+ G +GE++ A +A K + EAW ++
Sbjct: 641 EKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYRKGLALLNMER 700
Query: 567 SEKALECLQQVLY----IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E A++ +V+ D + A L+G LG A++
Sbjct: 701 FEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALE 744
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L + + KAI + +L + + ++ + +R + E + + + ALQL+P
Sbjct: 15 LVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPGNSD 74
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
A KG F+ALGR EEAL + YE AL S D
Sbjct: 75 ALYRKGTCFAALGRFEEAL----EAYESALESSPD 105
>gi|434382555|ref|YP_006704338.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
gi|404431204|emb|CCG57250.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
Length = 412
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ N G + AI ++++++ D +A RG ++ + + AI DF +
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDTNNIDAY-NRGVSKNYLELFDEAIKDFNKI 252
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EA++D K++E PN ++ + RG+ + +
Sbjct: 253 LELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKE 312
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
A++D + ++L + +AY G A +G+YK+A E + KAI+L+ N
Sbjct: 313 AIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPN 360
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 118/224 (52%), Gaps = 5/224 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR+ + I D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKTIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E + N+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDTNNIDA-YNRGVSKNYLELFDEAIKD 248
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ N AY G + + +G YK+A + + K+I+L+ N + + LT++
Sbjct: 249 FNKILELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKY--S 306
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L ++A++ + + + ++ AY RG LGQ+K+AI+D
Sbjct: 307 LGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIED 350
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G + I +D+ ++ Y +A RG A+ + AI D+ + I+ +
Sbjct: 164 NRGLARSNLGFFKKTIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG ++ L EAI+D +K LE EPN+ RG + A++D
Sbjct: 224 TNNIDAY-NRGVSKNYLELFDEAIKDFNKILELEPNNYCAYGNRGNSKNDLGLYKEALKD 282
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + + Y GL S+G YK+A + + KAI+L ++ A+G+ +L
Sbjct: 283 YDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELG 342
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+E + + ++ + Y+ RG + G +K+A+KD
Sbjct: 343 QYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 384
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 265 NRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELT 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A++D
Sbjct: 325 PDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 384
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 385 YKKALELDPNNEYA 398
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + AI F++IL+ +P A RG ++ + A+ D+ ++I+ N
Sbjct: 231 NRGVSKNYLELFDEAIKDFNKILELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELN 290
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + +LG EAI+D +KA+E P+ + RG + + A+ED
Sbjct: 291 PNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIED 350
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++L+ Y G + G YK+A + + KA++LD N
Sbjct: 351 YDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPN 394
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 299 NRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIE 356
>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 698
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A+ +++ ++ +P E TA +E AI ++ ++I+ NP EA+
Sbjct: 434 GLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNN 493
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G L + +A + KA++ + N A G V F ++ +V+ +KLD
Sbjct: 494 LGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDN 553
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y LG AL + E+KKA + +LK+I+++ N+ + +L + N +A++
Sbjct: 554 SNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYY 613
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++V+ ID + +AY+ G + L +KKA
Sbjct: 614 EKVISIDPLYIEAYNNLGTMFCALKDYKKA 643
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ A+ I ++I+ DP A + R + A + AI NP+ G+A+ G
Sbjct: 334 FKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYG 393
Query: 457 QARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSAC 509
L E+ + KA++ P N A+ L+E G++ A++
Sbjct: 394 VLLYKLKRYEESKELCKKAIDLNPYECIYYNNLANSLNELGLLG-------EAMQVYETA 446
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++ + N Y L AL + A + + K+I+L+ EA+ +L Y +L + +K
Sbjct: 447 IRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKK 506
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A +++ + IDK ++A+ G +L LG++ ++++
Sbjct: 507 ATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQ 543
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Query: 382 DFRLSRGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ + IA QVN Y A + + +P Y +A G + E +
Sbjct: 351 DYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYGVLLYKLKRYEESKELCK 410
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP + + LG EA+Q A+ F PN++++ K +
Sbjct: 411 KAIDLNPYECIYYNNLANSLNELGLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNI 470
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+++ ++L+ + AY LG + +YKKA KAI++D+N +A+ +L
Sbjct: 471 EDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGN 530
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L ++++ ++ + +D + Y G L+ L + KKAI
Sbjct: 531 VLFSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAI 576
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +++ ++ +P EA G+ + + A + +AI+ + + +A+ G
Sbjct: 473 AIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVL 532
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+LG E++Q K ++ + ++ ++ + G ++ K+F A++ ++++ S
Sbjct: 533 FSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEIN----SN 588
Query: 520 YTYLGLALS----SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
YT+ L+ + +A + + K I +D ++EA+ +L + L + +KA C Q
Sbjct: 589 YTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQ 648
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + F+ Y+ + LG+ ++A K+
Sbjct: 649 IAIKNNPNFALGYYSLATTQYMLGEKEEADKN 680
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ D +++ Y E + +G +++ ++A ++ +AI+ + + A+ G + L
Sbjct: 204 LLDLFIEKYNTYSEGYLYKGIFLYEEKKFKSAKINYLKAIELDSNNILAYYNLGNTQVIL 263
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
E +A + K L+ + + D+ G + K ++ A + + ++L E+ +AY
Sbjct: 264 NEYEDAKKSYEKVLKLDSDHKDVHSNLGNIYSDLKLYDDAKKMYNKEIELYPESVNAYYG 323
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
L L + E+K+A + K I +D N A+ + ++ N + A + + + I+
Sbjct: 324 LALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININP 383
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ AY+ G+LL+ L +++++ K+L + + P+
Sbjct: 384 NYGDAYNDYGVLLYKLKRYEES-KELCKKAIDLNPY 418
>gi|425470311|ref|ZP_18849181.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9701]
gi|389884127|emb|CCI35562.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9701]
Length = 317
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q L+ + A R + ++ A
Sbjct: 42 AQSVHLSYWLRSGIEQLEAGNYPQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A+QL++N
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALQLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L E+++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 839
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 1/239 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR K +D +RGIA G Y A++ Q L+ DP L RG A + E
Sbjct: 75 TRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALRLDPRSAATLNARGAALLSKEE 134
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT AI P A+ RG A A + A+ D + + +PN R
Sbjct: 135 YDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRA 194
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +F+ A+ D + ++L N AY+ G A GE ++A H +A++L R
Sbjct: 195 ALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGRT- 253
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ + + ++AL + L + RF+ A RG +L G+ +AI DL+
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLT 312
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+V G A+ F + L P + +AL RG A + + A++D T+A++ +
Sbjct: 56 NRGVAKVQAGDQRGAVEDFTRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALRLD 115
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A + E AI D + A+ EP RG+ + + + A++D
Sbjct: 116 PRSAATLNARGAALLSKEEYDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRALDD 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFL------EAWGHLT 558
+A ++L Y L GE+ A + AI+L RN+ EAW
Sbjct: 176 FNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRLKG 235
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + LA+ ++A+E R +AY R L+L GQ +A+ D
Sbjct: 236 EVQRALADHDRAVEL--------GRTPEAYTNRALVLKQTGQLDRALAD 276
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG A+ G+ A++D ++AL+ +P D L RGI D++ AV DL+ ++
Sbjct: 54 YNNRGVAKVQAGDQRGAVEDFTRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALR 113
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD + + G AL S EY +A AI + F A+ + + ++AL
Sbjct: 114 LDPRSAATLNARGAALLSKEEYDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRAL 173
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++ + Y R LL G+ AI D ++ R
Sbjct: 174 DDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIR 215
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + + + A+ F+ +++ P P R + E + AI+D+ AI+
Sbjct: 158 NRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLR 217
Query: 446 P-------SAGEAWKRRGQARAALGE---SVE-----------------------AIQDL 472
P GEAW+ +G+ + AL + +VE A+ D
Sbjct: 218 PRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGRTPEAYTNRALVLKQTGQLDRALADC 277
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL P A L RG + + A++DL+ + L+ ++ A T+ G A G+
Sbjct: 278 DEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALNPKSPVALTFRGDAYRQAGQ 337
Query: 533 YKKAEEAHLKAIQLDRNFLEAW 554
+A + +A++ +F+ A+
Sbjct: 338 PDRAIADYDEALRAVPDFVAAF 359
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ D+ L +P + AL RG + E+ AI D T AI NP + A
Sbjct: 268 GQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALNPKSPVALTF 327
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A G+ AI D +AL P+ RG+ + + + A D + L
Sbjct: 328 RGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEASLARADFERAMGLSP 387
Query: 515 ENKSAYTYLGLALS 528
+ +A AL+
Sbjct: 388 DRDAALARPAQALA 401
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PEA R +L+ A++D EA+ NP A RG+ GE AI DL++
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTR 313
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ P S L RG + + A+ D ++ + +A+ GLA GE
Sbjct: 314 AIALNPKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEAS 373
Query: 535 KAEEAHLKAIQL 546
A +A+ L
Sbjct: 374 LARADFERAMGL 385
>gi|427715955|ref|YP_007063949.1| hypothetical protein Cal7507_0626 [Calothrix sp. PCC 7507]
gi|427348391|gb|AFY31115.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 1174
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G + AIS +D+ L+ P Y EA RG A + + E AI+ F + + P
Sbjct: 205 GVKQTMIGDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPD 264
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW R+G A L +AI +A++ +P++ + H +G + K ++ A+
Sbjct: 265 YYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYD 324
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL---KAIQLDRNFLEAWGHLTQFYQDL 564
+LD S + G+ L+S+G + EEA L KA+ + N AW + +L
Sbjct: 325 KAQQLDSSCYSGWNARGVTLTSLG---RDEEAILSCDKALAIQPNDHLAWFNRGNALVNL 381
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL + L I+ F +A+ RG L LG +++AI
Sbjct: 382 GRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAI 422
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G+ AI D+ L P A RG A E A++ +A++
Sbjct: 339 ARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEIE 398
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +AW RG A LG EAI KALE +P+ + RGI + A+
Sbjct: 399 PNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILS 458
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++ + A+ G AL ++G +++A ++ KAI++ NF AW + +L
Sbjct: 459 SSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLG 518
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ + L I F A + RG+ L LG++++AI
Sbjct: 519 RYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAI 558
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A N + AI+ FD++L P Y A +G A + E AI+ F +AI+ +P
Sbjct: 238 RGYALSNLKRNEEAIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDP 297
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G LGE +A+ KA + + + + RG+ A+
Sbjct: 298 DNHEAWHNKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSC 357
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + A+ G AL ++G Y++A + KA++++ NF +AW + ++L
Sbjct: 358 DKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGC 417
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
E+A+ + L I + + + RG+ L LG++++AI SS + + P H WN
Sbjct: 418 YEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILS-SSKALEIQPDFHYAWN 474
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 21/272 (7%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KRN++ + K +I D+ + +G A + +Y AI+ FDQ +K DP EA
Sbjct: 246 KRNEE-AIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWH 304
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+G E E A+ + +A Q + S W RG +LG EAI KAL +
Sbjct: 305 NKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQ 364
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN RG + A+ + ++++ A+ G AL ++G Y++A +
Sbjct: 365 PNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILS 424
Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ KA+++ ++ + W G+L ++ + + +S KALE I F A++ RG
Sbjct: 425 YDKALEIQPDYHQVWDNRGIALGNLGRYEEAILSSSKALE-------IQPDFHYAWNNRG 477
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
L LG H++AI + P HL WN
Sbjct: 478 FALGNLGCHEEAILSYDKAIE-IQPNFHLAWN 508
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGK--YASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
T + + ++ F + GI + E K + + + I +E P G +
Sbjct: 152 TLLQNNNNVVHPFIQNLGITTIPEVKTNFPALTYQINNIAQEIENIPTTWFDLGVKQTMI 211
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AIS + +A++ P EAW RG A + L + EAI K L +P+ +
Sbjct: 212 GDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPDYYAAWNR 271
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G K + A+ +K+D +N A+ G L +GEY+KA ++ KA QLD
Sbjct: 272 KGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYDKAQQLDS 331
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ W L E+A+ + L I A+ RG L LG++++A+
Sbjct: 332 SCYSGWNARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEAL 388
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +K+ I +F + RG A N G Y AI +D+ L+ P Y + RG A
Sbjct: 387 ALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIAL 446
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI ++A++ P AW RG A LG EAI KA+E +PN
Sbjct: 447 GNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLA 506
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + A+ +++ + A G+AL ++G Y++A ++ KA+
Sbjct: 507 WNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILSYDKALA 566
Query: 546 LDRNFLEAW 554
+ + +AW
Sbjct: 567 IQPDIQQAW 575
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+Y AI + L+ P + A RG A E AI + +AI+
Sbjct: 441 NRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQ 500
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG LG EAI KALE +P+ L+ RGI + A+
Sbjct: 501 PNFHLAWNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILS 560
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+ + + + A+ G+A
Sbjct: 561 YDKALAIQPDIQQAWNNRGIA 581
>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
Length = 736
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 436 RGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+AY+ +G++L LG++ +A++ + ++
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATK 594
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQG 469
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARR 628
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 434 LGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 494 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 553
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 554 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 613
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ ++ I R S+ + G + LG + +AI
Sbjct: 614 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAI 654
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A+ +G
Sbjct: 514 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQG 573
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 574 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 633
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 634 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 693
Query: 577 VL 578
L
Sbjct: 694 SL 695
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P + +A +G + R EA + FT+A ++N + +AW +G L EAI
Sbjct: 562 NPQFSQAYYSQGIILQKLGRNSEA-LEAFTQATKANSNYYQAWLNQGALLHQLERFQEAI 620
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
KA +++ G ++ D++ A+ ++ K+N + LG +
Sbjct: 621 ASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFK 680
Query: 530 IGEYKKAEEAHLKAIQLDRN 549
+G+Y++A +A+ ++++ N
Sbjct: 681 LGQYERAIQAYQESLRYRSN 700
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716
Query: 498 DFNAAVEDLSACVKLDKE 515
+ + ++ + K+D E
Sbjct: 717 ELQQSPQNPTP--KVDSE 732
>gi|428213339|ref|YP_007086483.1| hypothetical protein Oscil6304_2964 [Oscillatoria acuminata PCC
6304]
gi|428001720|gb|AFY82563.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 580
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 9/213 (4%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI FD+ ++ P +PEA + RG A + + E A+S F +A + NP+ AW RG A
Sbjct: 297 AAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMA 356
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG +AIQ LS A++ +PN + + RG+ + + + A+ V++ +E
Sbjct: 357 LYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMF 416
Query: 519 AYTYL---GLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
Y L + Y +A +A K +++ N +AW G L Q + A+
Sbjct: 417 RYRSWVKRSEVLEKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYID---AIV 473
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + I + RG +L +GQ+ +AI
Sbjct: 474 AYDQAIAIWPNHYDPWMKRGRVLSKIGQYPQAI 506
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ +Y A++ FD++++ P P +G A Q +EAAI F +AI+
Sbjct: 250 FNRGVTLEKLQRYTDAVASFDRVIQFAPSNPLVWFYKGRALKHQW-VEAAIGCFDKAIEL 308
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ EAW RG A + G+ A+ +A + PN + RG+ + + A++
Sbjct: 309 HPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQ 368
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL---EAWGHLTQFY 561
LS +++ A+ + GLAL + Y++A A+ K +Q+ + + +W ++
Sbjct: 369 ALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMFRYRSWVKRSEVL 428
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ L +AL+ +VL + ++A+ RG LL
Sbjct: 429 EKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLL 462
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
++G+A + +YA A++ +D+ L+ P + RG T QR + A++ F IQ
Sbjct: 216 FNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTD-AVASFDRVIQ 274
Query: 444 SNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
PS W +G RA + VE AI KA+E PN + RGI + A
Sbjct: 275 FAPSNPLVWFYKG--RALKHQWVEAAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVA 332
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ K++ +A+ G+AL +G YK A +A AIQ+ NF EAW H +
Sbjct: 333 LSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALE 392
Query: 563 DLANSEKALECLQQVLYIDK 582
L E+AL ++V+ + +
Sbjct: 393 QLQRYEEALTAYEKVVQVTQ 412
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
FR R + ++ + K +A++ F++++K P RG + A++ +A+
Sbjct: 149 FR-GRSLLELQQSK--AAVTAFNKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAV 205
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P AW +G A EA+ + L+ P +A RG+ K + + A
Sbjct: 206 ALDPQNPAAWFNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTDA 265
Query: 503 VEDLSACVKLDKENKSAYTYLGLAL------SSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
V ++ N + Y G AL ++IG + KA I+L N+ EAW +
Sbjct: 266 VASFDRVIQFAPSNPLVWFYKGRALKHQWVEAAIGCFDKA-------IELHPNWPEAWMN 318
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
D E AL Q I+ S A+ RG+ L+GLG++K AI+ LS+
Sbjct: 319 RGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNA 373
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 10/224 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + YA A++ +D+ +++ P AL+ RGTA E AI+ + AIQ NP
Sbjct: 48 RGNRLYEQKNYAGAVAFYDKAIQKKPTMHRALLKRGTALMNLHRYEEAIAGYDGAIQVNP 107
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W RG+ L EA+ ++++ N + + RG + + AAV
Sbjct: 108 DDYWGWTFRGRCLFHLNRYQEALASFDQSIQINSNQYEAWYFRGRSLLELQQSKAAVTAF 167
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA- 565
+ VKL + S + Y GL S+ A + +A+ LD AW F Q +A
Sbjct: 168 NKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAVALDPQNPAAW-----FNQGVAL 222
Query: 566 ----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L + + ++ RG+ L L ++ A+
Sbjct: 223 DRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTDAV 266
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGIA + G+Y A+S FDQ K +P A +GRG A + AI + AIQ
Sbjct: 317 MNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQI 376
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNF-----KFK 497
P+ EAW RG A L EA+ K ++ EP + R V K +
Sbjct: 377 QPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEP----MFRYRSWVKRSEVLEKLE 432
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++ + +++ + A+ G LS Y A A+ +AI + N + W
Sbjct: 433 RYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYIDAIVAYDQAIAIWPNHYDPWMKR 492
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +A+ V+ + S A+ RG L L ++ +A +
Sbjct: 493 GRVLSKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECLEKLHRYPEAAR 541
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEA---------- 433
L RG+A G+Y AI ++ P +PEA RG A QR EA
Sbjct: 351 LGRGMALYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQV 410
Query: 434 --------------------------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
A+ F + ++ P+ +AW +RG + ++
Sbjct: 411 TQEPMFRYRSWVKRSEVLEKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYID 470
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI +A+ PN D +RG V K + A+ +++ + A+ G L
Sbjct: 471 AIVAYDQAIAIWPNHYDPWMKRGRVLSKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECL 530
Query: 528 SSIGEYKKAEEAHLKAIQLD 547
+ Y +A ++ A+++D
Sbjct: 531 EKLHRYPEAARSYGVALEVD 550
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 65/141 (46%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ KA++ +P L +RG + A+ ++++ ++ +T+ G L
Sbjct: 61 AVAFYDKAIQKKPTMHRALLKRGTALMNLHRYEEAIAGYDGAIQVNPDDYWGWTFRGRCL 120
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ Y++A + ++IQ++ N EAW + +L S+ A+ +V+ + + S
Sbjct: 121 FHLNRYQEALASFDQSIQINSNQYEAWYFRGRSLLELQQSKAAVTAFNKVVKLKPKLSSG 180
Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
++ RGL L + A+ L
Sbjct: 181 WYYRGLTFLSLDRPDLALTSL 201
>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
Length = 368
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 22/235 (9%)
Query: 390 AQVNEG-------KYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL 431
A VN+G +Y A + + + ++ DP + EA G+G +A F++ +
Sbjct: 94 AWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSI 153
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E + + I S+P + EAW +G + + +G + E+++ KA+E P A+ +G
Sbjct: 154 EYS----DKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGY 209
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ A++ ++++ E+ A+ G L Y +A + KAI++
Sbjct: 210 ELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDA 269
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AWG+ L ++A+EC +V+ ID F+ A+ +G L+ LG++ +AI+
Sbjct: 270 YAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQ 324
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 386 SRGIAQVNEGKYASAISIF-------DQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+GI G Y + F D+ + DP EA +G + ++ ++ +
Sbjct: 131 GKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLECY 190
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AI+ NP AW+ +G LG EAIQ A+E P A +G V +KF
Sbjct: 191 EKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDR 250
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ A++ +++ E+ A+ G L + Y +A E + K I++D F AW
Sbjct: 251 YDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKG 310
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L ++A++C + I+ ++ A+ +G L+ LG+ +A
Sbjct: 311 YALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGDALNELGRSDEA 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + ++GI+ G+ ++ +++ ++ +P Y A G+G + AI +
Sbjct: 166 SFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYD 225
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ NP AW +G EAI+ KA+E P A +G + + +
Sbjct: 226 NAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERY 285
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+E +++D E SA+ G AL +G Y +A + + AI+++ + +AW
Sbjct: 286 DEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGD 345
Query: 560 FYQDLANSEKALECLQQV 577
+L S++A EC ++
Sbjct: 346 ALNELGRSDEANECYKKA 363
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ D I +DP Y +AL +G + AI + E I+ +P +AW +G
Sbjct: 40 YYEAIASVDNIQVDDPYYIDALNYKGESLYALSRYNEAIGCYNEVIEMDPENSKAWVNKG 99
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL---- 512
+ + E EA +A+E +P + +GI + +N + E ++
Sbjct: 100 DSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKK 159
Query: 513 ---DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
D ++ A+ G++ S IG ++ E + KAI+L+ + AW +L ++
Sbjct: 160 ITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDE 219
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A++C + I+ + A+ +G +L+ ++ +AIK
Sbjct: 220 AIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIK 256
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G + G+Y AI +D ++ +P A +G+G + AI F +AI+ +
Sbjct: 206 GKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIH 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G L EAI+ K +E +P E+G +K ++ A++
Sbjct: 266 PEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQC 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++++ E A+ G AL+ +G +A E + KA +L
Sbjct: 326 YDNAIEINPEYADAWEGKGDALNELGRSDEANECYKKAEKL 366
>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
Length = 1297
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G+A G A+ + K DP A A Q+E + A +A+Q
Sbjct: 65 VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124
Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
+ + E W + + G+ EA I+ K LE+ P +IL ++G
Sbjct: 125 DRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +K + + V+ + V ++ E++ A+ YLG A ++I ++A A KAI++D N
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++W +L Y+ E+AL+C ++ + ID K+++L +LH L + +A+K ++
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSIN 303
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 34/261 (13%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+L + I + +G++ ISI + ILK +P +L+ A +LE+A++ A
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
+ PS E WK R L + E I DL++A
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502
Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
L+ + +S + + G++ +K D A ++ NK + L +
Sbjct: 503 KTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y +A E + KA++LD N + W + + E+A++ L ++ F+KA +
Sbjct: 563 LGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622
Query: 590 LRGLLLHGLGQHKKAIKDLSS 610
+G L LG + +A+K +S
Sbjct: 623 EKGDSLIKLGNYDEALKIFTS 643
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+LE A F +A NP+ + WK LG+ EA++ KALE +PN + +E+
Sbjct: 531 DLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEK 590
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
GI K K + A++ + +KL+ E A G +L +G Y +A + I+L+R
Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLER 649
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 387 RGIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +A V E GKY A+ +++ L+ DP +G + E AI F A++
Sbjct: 554 KNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKL 613
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A +G + LG EA++ + ++ E +++ +++R + FK +++ AA++
Sbjct: 614 NSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALK 673
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFY 561
DL+ + +++ K +L L E K E E + + +++ + AW L Y
Sbjct: 674 DLNLALNYERKEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAY 729
Query: 562 QDLANSEKALECLQQVLYI 580
+ + A+ + L I
Sbjct: 730 DSMGKVDSAIATYRDALEI 748
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 44/260 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------- 439
+G + + G Y A+ IF ++K + E + R R +RE EAA+ D
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683
Query: 440 --------------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
E + N AW+ A ++G+ AI
Sbjct: 684 KEKFLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYR 743
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
ALE P++ +L+E K F A++ + + E+ L AL + +Y
Sbjct: 744 DALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIKLKKY 803
Query: 534 KKAEEAHLKAIQLDRN--FLEAWGHLTQFYQDLANSEKALECLQQVL------YIDKRFS 585
+ A+E L+A++L++N LE G T +Y L N A+E + L +I + +
Sbjct: 804 EDAKEYLLRALELNKNAELLELLGD-TYYY--LKNYTSAIEHYKDALNLNASPHIYHKLA 860
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
K Y+ G L + ++AI
Sbjct: 861 KGYYKVGDLQEAIKAIERAI 880
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N G+ + RR + + E++E I++ E E SA +L G+ K
Sbjct: 28 INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E KLD N SAYT + L+ EYKKA KA+Q+DR E WG + Y
Sbjct: 80 ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWGTKAEIY 139
Query: 562 QDLANSEKALECLQQVL 578
Q + ++AL+ ++++
Sbjct: 140 QLKGDIDEALDVYKKLI 156
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D RL +GI +Y AI FD LK + + +AL +G + + A+ FT
Sbjct: 583 DMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I+ E +R R E A++DL+ AL +E ++ ++ + + KD+
Sbjct: 643 SLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYERKEKFLVLKKDVCK-ELKDY 701
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E + ++K+N SA+ L +A S+G+ A + A+++
Sbjct: 702 ECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEI 748
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 34/195 (17%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +D+ L+ P E L +G + + + + N EAW G
Sbjct: 159 YPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLG 218
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A A + EAI L KA++ +PN +
Sbjct: 219 AAYANIDRMREAINALKKAIKIDPN----------------------------------D 244
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
K ++ LG+ GEY++A + +AI++D N ++W L +AL+ + +
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304
Query: 577 VLYIDKRFSKAYHLR 591
L +DK++ A L+
Sbjct: 305 ALELDKKYESALLLK 319
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++K +E K K+ R K + + F+ +G+ YA + I +++ +
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA + G A A + AI+ +AI+ +P+ ++W G GE EA++
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A++ +PN + V + + A++ ++ ++LDK+ +SA
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
CV + K SI+ + + + G A N + AI+ + +K DP ++ I G
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E E A+ F EAI+ +P+ ++W L EA++ +++ALE +
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKA 536
L + V K K ++ E +ACV L E+ L L+ GE +KA
Sbjct: 316 LLLKRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKA 366
>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
MBIC11017]
Length = 810
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI+ FD +LK+ P A RG R +AAISD+ EA+ +P E +
Sbjct: 389 GKYPEAIAQFDTLLKQQPKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNH 448
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ LG+ AI D KA+ +PN A G V F AAV++L ++ +
Sbjct: 449 RGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ SA+ G S +G+ + AE+ KA++L + + L + A+
Sbjct: 509 NHLSAHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADY 568
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
Q L I+ + ++A+ G + + G+ ++A
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQA 598
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + SA F+Q L+ Y EA + G A + AI+ F ++ P A++
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAIAQFDTLLKQQPKTAAAFRE 414
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ R A G AI D ++AL +P A+ + RG + + AA+ D ++L
Sbjct: 415 RGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQP 474
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG G+ + A + KAIQ + N L A + + L + E A +
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGDPEGAEQDW 534
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
++ L + R +K Y RG L + + AI D + + T+ P L
Sbjct: 535 EKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQ-ALTINPQL 578
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + + + FR RG + G Y +AIS +++ L DP E RG A+ +
Sbjct: 400 TLLKQQPKTAAAFR-ERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGK 458
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI+D+ +AI+ P+ + + G G+ A+++L KA++ E N RG
Sbjct: 459 YEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRG 518
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A +D +KL Y G A S + + A + +A+ ++
Sbjct: 519 SYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQL 578
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
A +L + + E+A + Q L I+ + AY LRG L GQ
Sbjct: 579 TRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQ 629
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ + AI+ ++Q L +P A G Q E+E A F +A+Q N
Sbjct: 550 SRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQIN 609
Query: 446 PSAGEAWKRRGQARAALGESVE---AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P++ A+ RG+ RA G+ + A+QD +A+ P +L+ R F + A
Sbjct: 610 PNSTSAYLLRGELRAYQGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRA 669
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN------FLEAWGH 556
+ D + ++++ + + YT G + +Y+KA + + + IQ++ A+ +
Sbjct: 670 LADCNKGLEINPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSN 729
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L + + AL+ L L I ++ Y+ RGLL + + AI DL
Sbjct: 730 RASARIQLKDLDGALQDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDL 781
>gi|425452343|ref|ZP_18832160.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
gi|389765891|emb|CCI08329.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
Length = 436
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+I++ + +RG+ + + KY A++ F + + +P Y EA + RG Q +
Sbjct: 35 TQIAQGNNQDAIGHYNRGVDYIQQEKYDLALAEFTKAININPRYAEAYLNRGFLYEQQEK 94
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SDF +AI NP EA+ RG G+S A+ D ++AL P +A + RG
Sbjct: 95 PDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQALNINPRNATAYYNRG 154
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + A+ D + + ++ + AY G G+ A + +A+ ++ +
Sbjct: 155 NLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNINPLY 214
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + Y + + AL Q + I+ R++ AY+ RGLL G+ A+ D +
Sbjct: 215 ALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFDYNQ 274
Query: 611 G----SRTMMPHL 619
R M +L
Sbjct: 275 AININPRYAMAYL 287
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG +GK A+ ++Q L +P+Y A + RG Q + + A+SDF +AI
Sbjct: 185 LNRGFLYHEQGKPDLALFDYNQALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAINI 244
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG G+ A+ D ++A+ P A RG++ + A+
Sbjct: 245 NPRYAMAYNNRGLLYQQQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALS 304
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ AY GL G+ A + +AI ++ + +A+ + Y
Sbjct: 305 DFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQ 364
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ AL Q + I+ R ++AY RG+L + + +KAI+DL +
Sbjct: 365 GKPDLALSDYNQAININPREAQAYANRGVLYYYRQEREKAIRDLRQAA 412
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 27/269 (10%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
EA N+ F + K +++I+++ RL+ RG+ +GK A+S F+Q
Sbjct: 80 EAYLNRGFLYEQQEKPDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQA 139
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P A RG Q + + A+ D+ +A+ NP EA+ RG G+
Sbjct: 140 LNINPRNATAYYNRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDL 199
Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A+ D ++AL P N ++ HE+G + DFN A+ ++ AY
Sbjct: 200 ALFDYNQALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAI-------NINPRYAMAY 252
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL G+ A + +AI ++ + A+ + Y + AL Q + I
Sbjct: 253 NNRGLLYQQQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAINI 312
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ R ++AY+ RGLL + G+ A+ D +
Sbjct: 313 NPRLAEAYNNRGLLYYEQGKSDLALSDYN 341
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +GK A+ ++Q L +P EA + RG Q + + A+ D+ +A+ N
Sbjct: 152 NRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNIN 211
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG G+ A+ D ++A+ P A + RG++ + N A+ D
Sbjct: 212 PLYALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFD 271
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+ + G+ A +AI ++ EA+ + Y +
Sbjct: 272 YNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQG 331
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
S+ AL Q + I+ +++AY RG+L G+ A+ D +
Sbjct: 332 KSDLALSDYNQAININPGYAQAYLNRGVLYAVQGKPDLALSDYN 375
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I+++ RL+ RG+ +GK A+S ++Q + +P Y +A + RG A Q +
Sbjct: 307 NQAININPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQGK 366
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+SD+ +AI NP +A+ RG E +AI+DL +A E D +E
Sbjct: 367 PDLALSDYNQAININPREAQAYANRGVLYYYRQEREKAIRDLRQAAELFRQQGDAFYE 424
>gi|416384390|ref|ZP_11684616.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
gi|357265058|gb|EHJ13868.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
Length = 210
Score = 84.7 bits (208), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 375 KSKSISVDF--RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K+ +++VD + +GI + G Y A+ F+Q++ E+P A RG A + + E
Sbjct: 12 KTSALTVDTVEMVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFE 71
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT A++ +P EA+ RG LGE +AI D KALE PN A + G+
Sbjct: 72 QALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA 131
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A D + V +D AY GLAL +GE + A
Sbjct: 132 HLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENA 175
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
++ +G ++ + + A+ DF + I NP A+ RG A ++LG+ +A+ D + AL+
Sbjct: 23 MVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALK 82
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + + A+ D ++++ + A LGLA
Sbjct: 83 LDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA----------- 131
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
HL LA + + + ID + +AY+ RGL L
Sbjct: 132 ------------------HLNSGSPGLAKID-----FTEAVMIDPLYGEAYYNRGLALLD 168
Query: 598 LGQHKKAIKDLSSGS 612
LG+ + AI D +
Sbjct: 169 LGERENAIADFQKAA 183
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G++ A++ F LK DP EA + RG E E AI+D+ +A++
Sbjct: 58 FNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEI 117
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A G A G A D ++A+ +P + + RG+ + A+
Sbjct: 118 NPNDAFAQNNLGLAHLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENAIA 177
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
D + +E AL+ I KKA +
Sbjct: 178 DFQKAADIWEEMGEKIA-AQTALAEIDALKKASQ 210
Score = 47.0 bits (110), Expect = 0.034, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A++ + ++A++ +I NR + +S L + + D AL+LDP +++AY+ +
Sbjct: 35 NYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNR 94
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G + LG E+A++ +EK E
Sbjct: 95 GNVYLQLGEDEKAIADYEKALE 116
>gi|126658024|ref|ZP_01729176.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
gi|126620662|gb|EAZ91379.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
Length = 214
Score = 84.7 bits (208), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 83/162 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y +A++ F+Q++ ++P A RG A + + E A++DFT+ ++
Sbjct: 29 VQQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKL 88
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG LGE +AI D KAL+ PN A + G+ + A
Sbjct: 89 DPQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDAFAQNNLGLAHLNAGSPELAEI 148
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + V +D AY GLAL +GE KKA KA ++
Sbjct: 149 DFTQAVTIDPMYGEAYYNRGLALIDLGETKKAIADFQKAAEI 190
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
+S++ I +L D + ++ +G ++ Q EAA++DF + I NP A+ RG
Sbjct: 11 SSSVPIESSVLTVDTV---EMVQQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGF 67
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A ++LG+ +A+ D +K L+ +P RG V + + A+ D +K++ +
Sbjct: 68 AYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDA 127
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A LGLA + G + AE +A+ +D + EA+ + DL ++KA+ Q+
Sbjct: 128 FAQNNLGLAHLNAGSPELAEIDFTQAVTIDPMYGEAYYNRGLALIDLGETKKAIADFQKA 187
Query: 578 LYI 580
I
Sbjct: 188 AEI 190
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G ++ G A+ D ++ + P + RG F A+ D + +KLD
Sbjct: 30 QQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLD 89
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G +GE KKA + KA++++ N A +L + + + E A
Sbjct: 90 PQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDAFAQNNLGLAHLNAGSPELAEID 149
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
Q + ID + +AY+ RGL L LG+ KKAI D +
Sbjct: 150 FTQAVTIDPMYGEAYYNRGLALIDLGETKKAIADFQKAA 188
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 NWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A+ + ++AQ+ +I NR F YS L + + D K L+LDP ++QAY+ +
Sbjct: 40 NYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNR 99
Query: 110 GCAFSALGRKEEALSVWEKG 129
G + LG ++A++ +EK
Sbjct: 100 GNVYLQLGEDKKAIADYEKA 119
>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
Length = 543
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQIL 408
A R++ + +++K+ S DF + RG + + SAI+ +
Sbjct: 311 AFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAI 370
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
K DP + RG A E AI+DFT I P A++ RG + + A
Sbjct: 371 KIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALA 430
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D+SKA++ P A+ RG+ D+ AV+D S +KLD +K+ Y LA
Sbjct: 431 IADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYK 490
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+ YK A + + +AI+LD N ++ + + Y+ + + A
Sbjct: 491 YLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMGKKDLA 532
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+Q ++E P + E +GT + E A I D+T+ I P A++ RG A L
Sbjct: 265 EQYIEEQP-FTEFYATQGTTYSTLEEKYALTIRDYTKVITLFPGNSAAFRDRGYLYAKLN 323
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
++ AI D + A+ +P S+ L RG + + K +A+ DLSA +K+D + Y
Sbjct: 324 KTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAIKIDPDALQHYYNR 383
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GLA G Y+ A I A+ + Y + A+ + + + + +
Sbjct: 384 GLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPK 443
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSS------GSRTM 615
+++Y +RGL +K+A++D S+ GS+T+
Sbjct: 444 EAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTI 481
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 1/229 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S FR RG K SAI+ F + DP AL RG ++LE+AI+D +
Sbjct: 309 SAAFR-DRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLS 367
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ +P A + + RG A G AI D + + P +A RG +
Sbjct: 368 AAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKP 427
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D+S + L + +Y GLA + +YK+A + +I+LD + +
Sbjct: 428 ALAIADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRAL 487
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y+ L N + A++ Q + +D Y RG + +G+ A D
Sbjct: 488 AYKYLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMGKKDLAAADF 536
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E KYA I + +++ P A RG A + ++AI+DFT AI +P + A
Sbjct: 288 EEKYALTIRDYTKVITLFPGNSAAFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALG 347
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + AI DLS A++ +P++ + RG+ +++ + A+ D + +
Sbjct: 348 YRGALYIETKQLESAIADLSAAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKG 407
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
N AY Y G + + + A KAI L E++ Y A+ ++A++
Sbjct: 408 PPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQD 467
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +D Y R L L +K AIKD +
Sbjct: 468 FSTSIKLDPGSKTIYVNRALAYKYLNNYKAAIKDYT 503
>gi|145505641|ref|XP_001438787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405959|emb|CAK71390.1| unnamed protein product [Paramecium tetraurelia]
Length = 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +Y AI+ ++Q L +P A +G A Q + + AI + E I N
Sbjct: 38 NKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQKGRALDTQNQSQEAIECYNEVISKN 97
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW R+G A L + EAI ++AL P + +G++ + K + A+E
Sbjct: 98 PQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPKRFSAWNNKGLIIQRLKQYQEAIEC 157
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + A+ G AL + +Y++A + +A+ ++ AW + +
Sbjct: 158 YNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNKGRALDTQN 217
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
S++A+EC + + + ++ A+H +GL L L Q+++ ++
Sbjct: 218 QSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQYEEVLE 258
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++Q L +P + A +G+A + + AI+ + +A+ NP AW ++
Sbjct: 14 QYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQK 73
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A +S EAI+ ++ + P +G+ A+ + + ++ +
Sbjct: 74 GRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPK 133
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ GL + + +Y++A E + +A+ ++ F AW + Q L ++A+ C
Sbjct: 134 RFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYN 193
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Q L+I+ + A++ +G L Q ++AI+
Sbjct: 194 QALFINPKNDSAWYNKGRALDTQNQSQEAIE 224
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 90/177 (50%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI + +A+ NP AW +G A L + EAI ++AL P + ++
Sbjct: 13 KQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQ 72
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G A+E + + + ++ SA+ GLAL ++ ++++A + +A+ ++
Sbjct: 73 KGRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINP 132
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW + Q L ++A+EC Q L+++ +F A++ +G L L Q+++AI
Sbjct: 133 KRFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAI 189
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++Q L +P + A +G+A + + AI+ + +A+ NP AW +
Sbjct: 150 QYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNK 209
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A +S EAI+ ++A+ P H +G+ + +E + + ++ +
Sbjct: 210 GRALDTQNQSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQYEEVLECYNKSISINCQ 269
Query: 516 NKSAYTYLGLALSSIGEY 533
+ ++ G+ L S +Y
Sbjct: 270 ARKSFENKGVILHSQQKY 287
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +Y AI+ ++Q L +P A +G A Q + + AI + EAI N
Sbjct: 174 NKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNKGRALDTQNQSQEAIECYNEAISKN 233
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P AW +G A L + E ++ +K++ + +G++
Sbjct: 234 PQYDSAWHSKGLALQNLNQYEEVLECYNKSISINCQARKSFENKGVI 280
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
T+L L S+ +Y++A E + +A+ ++ F AW + Q L ++A+ C Q L I
Sbjct: 3 TFLNCILQSLKQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSI 62
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + A++ +G L Q ++AI+
Sbjct: 63 NPKNDSAWYQKGRALDTQNQSQEAIE 88
>gi|148284415|ref|YP_001248505.1| hypothetical protein OTBS_0721 [Orientia tsutsugamushi str.
Boryong]
gi|148284902|ref|YP_001248992.1| hypothetical protein OTBS_1666 [Orientia tsutsugamushi str.
Boryong]
gi|146739854|emb|CAM79787.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740341|emb|CAM80761.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 324
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI++ + +K P + EA +G + A + E A+ +F AI+ EA+ +G A
Sbjct: 70 AITLCNLAIKYKPHFAEAYNNKGVSLAILGKYEDALENFDIAIKYRSDNPEAYYNKGIAL 129
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EAI++ A+ + PN ++ H +G+ F A+E +K D + +A
Sbjct: 130 MYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATA 189
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G LS + Y +A E+ AI+ + N EA+ ++ L +KA+E +
Sbjct: 190 YCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGKHQKAIENFDIAIA 249
Query: 580 IDKR--FSKAYHLRGLLLHGLGQHKKAIKDLS 609
I + F++ Y +G+ L LGQ+ KA ++ +
Sbjct: 250 IKYKPNFAENYLEKGISLVSLGQYSKAKENFN 281
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K +S + + ++GIA + G AI +D ++ P Y EA +G AF + + A
Sbjct: 113 KYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKA 172
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F AI+ +P+ A+ +G + L EAI+ + A+++ PN A+ + RG++
Sbjct: 173 IEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFE 232
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K A+E+ + + + A YL G++L S+G+Y KA+E AI+ + N +
Sbjct: 233 KLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIA 292
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ + + +L N E +Q L I K++S
Sbjct: 293 EYEAMFKKLTELENFTGVKE-YEQKLQILKKYS 324
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI ++ AI++ P EA+ +G + L + EAI + A++++P+ A+ + +
Sbjct: 32 EQKEAIENYNLAIKNKPDFAEAYNNKGASYGKLEKDKEAITLCNLAIKYKPHFAEAYNNK 91
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + A+E+ +K +N AY G+AL +G ++A E + AI+ N
Sbjct: 92 GVSLAILGKYEDALENFDIAIKYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPN 151
Query: 550 FLEAW-------GHLTQFYQ-----DLA-----NSEKALECLQQVLYIDKRFS------- 585
+ EA+ L QF + DLA N A VL + KR+S
Sbjct: 152 YSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCN 211
Query: 586 ----------KAYHLRGLLLHGLGQHKKAIKDL 608
+AY+ RG++ LG+H+KAI++
Sbjct: 212 LAIKYNPNCAEAYYRRGMIFEKLGKHQKAIENF 244
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + KAI D LA Y+ D CN+ + S L+ + I C+ A++ +P
Sbjct: 163 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 220
Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
+AY +G F LG+ ++A+ ++
Sbjct: 221 AEAYYRRGMIFEKLGKHQKAIENFD 245
>gi|75908429|ref|YP_322725.1| hypothetical protein Ava_2212 [Anabaena variabilis ATCC 29413]
gi|75702154|gb|ABA21830.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 1276
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G + AI+ ++Q ++ +P E RG AI+ + +AI+ P
Sbjct: 381 QGLQLAKTGDLSGAIANYEQAIQLNPNSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 440
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EA+ L +A+ +P+ +G K A+
Sbjct: 441 DYYKAWYNRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASY 500
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL +Y+ A +++ KA+++ +F E W +L
Sbjct: 501 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQ 560
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ Q L I F A++ RG+ L LG ++AI
Sbjct: 561 WSEAIASWDQALSIQADFYLAWYNRGVALENLGHREEAI 599
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S ++ +RG+ + ++ AI+ +DQ ++ P Y +A RG E A++
Sbjct: 408 SYEYWFNRGLTLFHLERFVEAIASYDQAIEIKPDYYKAWYNRGGTLGQLGLYEEAVASLK 467
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI P AW +G A LG+ EAI +AL P + + RGI + +
Sbjct: 468 QAITIQPDMPGAWSSKGWAELKLGQIGEAIASYDEALLLSPEDQENWYYRGIALGVDEQY 527
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA++ +++ + + G+ L ++ ++ +A + +A+ + +F AW +
Sbjct: 528 EAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQADFYLAWYNRGV 587
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++L + E+A+ +Q + I F A++ + + L L + +AI
Sbjct: 588 ALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAI 633
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++ Q + P P A +G A ++ AI+ + EA+ +P E W
Sbjct: 457 GLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASYDEALLLSPEDQENWYY 516
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A + AI KALE +P+ ++ +RG+V F K ++ A+ + +
Sbjct: 517 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQA 576
Query: 515 ENKSAYTYLGLALSSIGE-------YKKA----EEAHL---------------------- 541
+ A+ G+AL ++G YK+A + HL
Sbjct: 577 DFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAIVCY 636
Query: 542 -KAIQLDRNFLEAW 554
A+Q+ ++ EAW
Sbjct: 637 DNALQIKLDYWEAW 650
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + +Y +AI +D+ L+ P + E I RG ++ AI+ + +A+
Sbjct: 517 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQA 576
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG EAI +A+ +P+ + + + F + F A+
Sbjct: 577 DFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAIVCY 636
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
+++ + A+ G A+ ++ E
Sbjct: 637 DNALQIKLDYWEAWIGRGTAIGNLNE 662
>gi|427737267|ref|YP_007056811.1| hypothetical protein Riv7116_3821 [Rivularia sp. PCC 7116]
gi|427372308|gb|AFY56264.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 279
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ + + + +P Y A GRG + + + AI+D+ EA++ P +A+
Sbjct: 72 QGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIADYNEALRIAPDNAQAYN 131
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R ARAA G+ A+QD KA+E PN A+ + RG D N A+ D + +++
Sbjct: 132 NRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIK 191
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G A ++ G+ + A + KAI+L+ NF A+ + +L + + L
Sbjct: 192 SNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGDKDAGLAD 251
Query: 574 LQQVLYI 580
LQ+ I
Sbjct: 252 LQRAAEI 258
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +K+ S++ ++ L+ RG+ Q + G AI+ +++ L+ P +A R AR
Sbjct: 78 AIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIADYNEALRIAPDNAQAYNNRANAR 137
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A Q ++ A+ D+ +AI+ NP+ EA+ RG ARAA G+ EAI D ++A+E + N A
Sbjct: 138 AAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIKSNYAVA 197
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ RG D AV D + ++L+ +AY G A +G+
Sbjct: 198 YNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGD 244
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ +G + A+ +D+ ++ +P Y EA RG ARA + AI+D+T AI+
Sbjct: 132 NRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIK 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG ARAA G+ A+ D +KA+E PN + RG + D +A + D
Sbjct: 192 SNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGDKDAGLAD 251
Query: 506 LSACVKLDKE 515
L ++ +E
Sbjct: 252 LQRAAEIFQE 261
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P + +G + Q + + AI+ +T+AI NP A+ RG + G+ AI
Sbjct: 55 NPSTAKEFYAQGQYKHIQGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIA 114
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL P++A + R D + AV+D ++L+ AY G A ++
Sbjct: 115 DYNEALRIAPDNAQAYNNRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAAD 174
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ +A + +AI++ N+ A+ + + E A+ + + ++ F AY+
Sbjct: 175 GDRNEAIADYTRAIEIKSNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNN 234
Query: 591 RGLLLHGLGQHKKAIKDL 608
RG LG + DL
Sbjct: 235 RGNARVELGDKDAGLADL 252
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+NPS + + +GQ + G++ AI +KA+ P + RG+V F D A+
Sbjct: 54 ANPSTAKEFYAQGQYKHIQGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAI 113
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +++ +N AY A ++ G+ A + + KAI+L+ N+ EA+ +
Sbjct: 114 ADYNEALRIAPDNAQAYNNRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAA 173
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +A+ + + I ++ AY+ RG G + A+ D +
Sbjct: 174 DGDRNEAIADYTRAIEIKSNYAVAYNNRGNARAAQGDKEGAVADYN 219
>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
16795]
gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
Length = 523
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 39/304 (12%)
Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFC-VTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
E + +F DML + E + N+K V +I + D RG + K+ SAI
Sbjct: 77 EDLERKTFIQDMLNHANMEFEINEKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAI 136
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------------- 447
F+++++ D Y EA G+G + + + AI ++ +A+Q +P+
Sbjct: 137 KDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSN 196
Query: 448 ------AGEAWKR--------------RGQARAALGESVEAIQDLSKALEFEPNSADILH 487
A E++++ RG+ A LG EA++D + A+ E +L+
Sbjct: 197 LKEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLY 256
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA--LSSIGEYKKAEEAHLKAIQ 545
ER + + K + A+ D A V L K Y LG+A + + A E + K+I+
Sbjct: 257 ERAGIFYLMKKYKDALLDYKAFVNLAPHMKEGY--LGMADCYCQMNQMNNAIEYYNKSIE 314
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D N+ E++ + + Y + KA++ L +V+ ++ + +AY+ R L + H K I
Sbjct: 315 IDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENHTKVI 374
Query: 606 KDLS 609
+D S
Sbjct: 375 RDFS 378
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 84/145 (57%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E + ++K +E + AD + RG KF+ F +A++D ++LDK K AY G+
Sbjct: 100 EKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVC 159
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G+ A + + KA+Q+D N+ A+ +L Y +L +KA+E ++ L +D+
Sbjct: 160 YSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDENDVS 219
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSG 611
AY+ RG +L LG++K+A+KD ++
Sbjct: 220 AYYNRGRILAYLGRYKEALKDFTNA 244
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI +D +R +A + + AI D+++ +P EA R A
Sbjct: 310 NKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIEN 369
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
I DF++AI+ G+++ RG+ + G +A D ++++E +S + RG
Sbjct: 370 HTKVIRDFSKAIKMGYKVGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRG 429
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
N +++N A+ D + ++LD Y Y GLA ++ +YK+A + AI+
Sbjct: 430 AANLDLEEYNEAILDFNKAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIE 484
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ + + P E +G ++ AI + ++I+ +P+ E++ R
Sbjct: 267 KYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEIDPNYEESYFNR 326
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A + +AI+DL K + P + + + R + + ++ + D S +K+ +
Sbjct: 327 SVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENHTKVIRDFSKAIKMGYK 386
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+Y G S G +KKA++ + ++I+ + + DL +A+
Sbjct: 387 VGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFN 446
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +D Y+ RGL + L Q+K+AI D S
Sbjct: 447 KAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFS 480
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E+ ++ + I+ + + RG + AI+D K ++ + N + +
Sbjct: 97 EINEKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGK 156
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + D + A+++ +++D + AY LG++ S++ EY KA E++ KA++LD N
Sbjct: 157 GVCYSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDEN 216
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + + L ++AL+ + ++K + + R + + + ++K A+ D
Sbjct: 217 DVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLYERAGIFYLMKKYKDALLDYK 276
Query: 610 SGSRTMMPHL 619
+ + PH+
Sbjct: 277 AFV-NLAPHM 285
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 34/232 (14%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET-------------SNEAKR 364
+N N E Y+KS D +S +RS K D L++ + EA
Sbjct: 299 MNQMNNAIEYYNKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYY 358
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N+ RI + DF + AI + ++ K + RG
Sbjct: 359 NRALAYGRIENHTKVIRDF--------------SKAIKMGYKVGK-------SYCNRGKE 397
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + A D+T +I+ + + RG A L E EAI D +KA+E +
Sbjct: 398 YSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFNKAIELDNTKLG 457
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ RG+ + K + A++D S ++ + AY G A IG+Y A
Sbjct: 458 NYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDYDNA 509
>gi|348575498|ref|XP_003473525.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cavia
porcellus]
Length = 792
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++L++
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQ 214
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G +A+K+
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLPEALKNF 306
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 370 VTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 168 VNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFH 227
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 228 RGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQ 287
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 288 LRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 344
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 167 AVNDLTKAIQLQPSA-RLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTF 225
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 226 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 285
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 286 LQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 338
>gi|298492452|ref|YP_003722629.1| hypothetical protein Aazo_4041 ['Nostoc azollae' 0708]
gi|298234370|gb|ADI65506.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 280
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ S + +F + +G Q +G +AI+ + + + + Y A RG A
Sbjct: 51 RLTPKTSKAGEFYI-QGQNQHAKGNSQAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNK 109
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D+ +A++ NP+ E + RG ARA+LG+ AI D ++A+ N A + RG
Sbjct: 110 EGAIADYNQALRLNPNDAETYNNRGNARASLGDQQNAITDYNEAIRLANNYAQAYNNRGN 169
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
N A+ D + +++D+ AY G +S G+ +KA + +AI+L+ NF
Sbjct: 170 ARATQGHKNGALADYTQAIRIDQNYAVAYNNRGNTYASQGDQQKAIADYNQAIRLNPNFA 229
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
A+ + + + AL+ LQ+ I DK +K
Sbjct: 230 PAFNNRGNAFAATGDKRSALQDLQRAAAILDKEGNK 265
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ ++++I N A+K RG A +G AI D ++AL PN A+ + RG
Sbjct: 76 QAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNKEGAIADYNQALRLNPNDAETYNNRGN 135
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D A+ D + ++L AY G A ++ G A + +AI++D+N+
Sbjct: 136 ARASLGDQQNAITDYNEAIRLANNYAQAYNNRGNARATQGHKNGALADYTQAIRIDQNYA 195
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y + +KA+ Q + ++ F+ A++ RG G + A++DL
Sbjct: 196 VAYNNRGNTYASQGDQQKAIADYNQAIRLNPNFAPAFNNRGNAFAATGDKRSALQDL 252
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGE + + GQ + A G S AI SK++ A RG+ F + A+ D +
Sbjct: 59 AGEFYIQ-GQNQHAKGNSQAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNKEGAIADYN 117
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + Y G A +S+G+ + A + +AI+L N+ +A+ + +
Sbjct: 118 QALRLNPNDAETYNNRGNARASLGDQQNAITDYNEAIRLANNYAQAYNNRGNARATQGHK 177
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
AL Q + ID+ ++ AY+ RG G +KAI D + R + P+
Sbjct: 178 NGALADYTQAIRIDQNYAVAYNNRGNTYASQGDQQKAIADYNQAIR-LNPNF 228
>gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424]
gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 271
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
+ +G + + + AI+DFT+AIQ P+ +A+ R LG AI D +KA+E
Sbjct: 41 IYNKGVDKLSAGDYQGAIADFTQAIQLAPNDADAYYNRAYGYLILGNFEGAIADYTKAVE 100
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
PN R V F K++ AAV+D + + + Y Y G A S + + ++A
Sbjct: 101 INPNYTYAYGNRCYVYFLSKNYEAAVKDCTTAISQETNYADFYIYRGNAKSGLNQDQEAL 160
Query: 538 EAHLKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ KAI+L N +A+ + + L N ++A+ + + ++ AY+ RG+
Sbjct: 161 ADYNKAIELAANNPKTLAKAYYNRGLVHNGLENHQQAIADYSESIRLNPDDGDAYYNRGV 220
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
+GLG +++AI DL M L N R L
Sbjct: 221 TYYGLGNNQEAITDLE-----MAAQLFTNQGRQEKL 251
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +R + G + AI+ + + ++ +P Y A R + EAA+ D T
Sbjct: 72 ADAYYNRAYGYLILGNFEGAIADYTKAVEINPNYTYAYGNRCYVYFLSKNYEAAVKDCTT 131
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL----HERGIVNFKF 496
AI + + + RG A++ L + EA+ D +KA+E N+ L + RG+V+
Sbjct: 132 AISQETNYADFYIYRGNAKSGLNQDQEALADYNKAIELAANNPKTLAKAYYNRGLVHNGL 191
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++ A+ D S ++L+ ++ AY G+ +G ++A
Sbjct: 192 ENHQQAIADYSESIRLNPDDGDAYYNRGVTYYGLGNNQEA 231
>gi|392413167|ref|YP_006449774.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390626303|gb|AFM27510.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 546
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 69/302 (22%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N+G+ A++I D I+ ++P AL+ RG A+ Q E + A+ D+T AI +P G A
Sbjct: 49 INKGETGQAVAILDGIMLKNPKEVSALVLRGWAKERQDEYDLALHDYTAAIDLDPDYGSA 108
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W+ RG+ A + + A++DL +A E +P++A I+ G++ F +D++ A +
Sbjct: 109 WEMRGRLLARMEDHEGALRDLKRAAELQPHAAAIVASMGLMRFFEQDYDGARTYFDKSSQ 168
Query: 512 LDKENKSAY-----TYL-----------------------------GLALSSIGEYKKAE 537
LD + +SAY YL G A G+ +K+
Sbjct: 169 LDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQPQKSL 228
Query: 538 EAHLKAIQLDRNFLEAWGH----------LTQFYQD------------------------ 563
E KA++LD E + + L + +D
Sbjct: 229 EDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLNQATILMM 288
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+ ++ALE L+Q + ++ Y R LL G G + A+KDL+ + + P +W L
Sbjct: 289 MGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKDLNKALQ-VQPDDVWLL 347
Query: 624 TR 625
+
Sbjct: 348 IK 349
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 10/225 (4%)
Query: 395 GKYASAISIFDQILKEDPMYP-----EALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
G+Y A+ + Q + +P P AL+ GT A+ D +A+Q P
Sbjct: 290 GRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYL-----GALKDLNKALQVQPDDV 344
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+R + +A+ DL +E +P + + RG + F K A++DL
Sbjct: 345 WLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIA 404
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ L E+ +AY L A G+ +A + +A++ + +F A+ L + + ++ ++
Sbjct: 405 IDLLPEDAAAYQLLAEAFLKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQ 464
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
ALE + L ID +A R L L ++ A++DL +++
Sbjct: 465 ALEAYSRALTIDPNSFEARMRRAELFIELNNYQNAVQDLEHAAKS 509
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + G Y A+ ++ L+ P LI R + A++D I+ +
Sbjct: 315 NRALLYLGTGNYLGALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELD 374
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA RG + AIQDL A++ P A K D A++
Sbjct: 375 PENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAFLKKGDTPEALKM 434
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + +A+ LG + +A EA+ +A+ +D N EA + + +L
Sbjct: 435 IGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEARMRRAELFIELN 494
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + A++ L+ + K Y LR + LG +KA +DL
Sbjct: 495 NYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDL 537
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------AGEAW 452
A++ D +++ DP EA + RG+ ++LE AI D AI P EA+
Sbjct: 363 ALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAF 422
Query: 453 KRRGQARAAL---GESV------------------------EAIQDLSKALEFEPNSADI 485
++G AL G+++ +A++ S+AL +PNS +
Sbjct: 423 LKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEA 482
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
R + + ++ AV+DL K + + Y + ++G+ +KA + KA
Sbjct: 483 RMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDLWKA 540
>gi|220907964|ref|YP_002483275.1| hypothetical protein Cyan7425_2558 [Cyanothece sp. PCC 7425]
gi|219864575|gb|ACL44914.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 210
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F+QIL+ P E +G A +LE AI F+EA++ + +A + + RG A + LG
Sbjct: 49 FNQILQTQPQTAEDYYDQGLALQGAGDLEGAIRSFSEAVKLSGTA-DNYFARGLALSDLG 107
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ +AI D + A+ +PN A + RG +D A+ DLS +KLD +AY
Sbjct: 108 DHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIADLSQAIKLDSSFVAAYYSR 167
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
GLA + G K A + + A++L A+ +L+Q YQ N
Sbjct: 168 GLAHYNAGNEKLARQDYNMAVRLSPGMTSAYYNLSQQYQTGGN 210
Score = 62.4 bits (150), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
Q+ ++ L+ +P +A+ +++G+ D A+ S VKL + Y GLALS
Sbjct: 47 QEFNQILQTQPQTAEDYYDQGLALQGAGDLEGAIRSFSEAVKLSGTADN-YFARGLALSD 105
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G++K+A + AI+LD NF A+ + L + A+ L Q + +D F AY+
Sbjct: 106 LGDHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIADLSQAIKLDSSFVAAYY 165
Query: 590 LRGLLLHGLGQHKKAIKDLSSGSR 613
RGL + G K A +D + R
Sbjct: 166 SRGLAHYNAGNEKLARQDYNMAVR 189
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S + D +RG+A + G + AI+ ++ ++ DP + A RGTAR ++ AI+D
Sbjct: 90 SGTADNYFARGLALSDLGDHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIAD 149
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
++AI+ + S A+ RG A G A QD + A+ P
Sbjct: 150 LSQAIKLDSSFVAAYYSRGLAHYNAGNEKLARQDYNMAVRLSP 192
>gi|427738985|ref|YP_007058529.1| putative low-complexity protein [Rivularia sp. PCC 7116]
gi|427374026|gb|AFY57982.1| putative low-complexity protein [Rivularia sp. PCC 7116]
Length = 540
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D R + RG+A+ Y A+ +++ ++ +P Y EA R Q +
Sbjct: 277 SRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPSYAEAYNNRAYLYIQQEK 336
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+ DF AI NP A+ + + +A+Q+ ++A+ F A + RG
Sbjct: 337 YQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNATEAIRFNSRYARAYNNRG 396
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + K++ AA +D +K + +AY G A +IG YK A + KAI+++R
Sbjct: 397 LGQYGLKNYQAAAKDFRNAIKFSRRWATAYYNSGRARYAIGLYKDATKHFDKAIKINREH 456
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
++A+ + + D E A++ +V+ + ++ AY ++G L L +
Sbjct: 457 VDAYYYRSLARFDRKKYEDAIKDSNRVIARNPSYAAAYEIKGKSLLALNK 506
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y SA++ + + ++ D A RG A++ + + A+ D+ AI+ NPS EA+ R
Sbjct: 269 YQSAVTYYSRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPSYAEAYNNRA 328
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A+QD +A+ P A + + + + KD++ AV++ + ++ +
Sbjct: 329 YLYIQQEKYQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNATEAIRFNSRY 388
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL + Y+ A + AI+ R + A+ + + + + A + +
Sbjct: 389 ARAYNNRGLGQYGLKNYQAAAKDFRNAIKFSRRWATAYYNSGRARYAIGLYKDATKHFDK 448
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ I++ AY+ R L +++ AIKD
Sbjct: 449 AIKINREHVDAYYYRSLARFDRKKYEDAIKD 479
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V + Y+ A+ + ++ + Y A RG + + +AA DF AI+ + A
Sbjct: 366 VEQKDYSKAVQNATEAIRFNSRYARAYNNRGLGQYGLKNYQAAAKDFRNAIKFSRRWATA 425
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ G+AR A+G +A + KA++ D + R + F K + A++D + +
Sbjct: 426 YYNSGRARYAIGLYKDATKHFDKAIKINREHVDAYYYRSLARFDRKKYEDAIKDSNRVIA 485
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +AY G +L ++ + +A++A KA+++
Sbjct: 486 RNPSYAAAYEIKGKSLLALNKPVEAKQAFDKAVKI 520
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ +AV S ++LD + +AYTY GLA S + Y+ A + + +AI+++ ++ EA+ +
Sbjct: 268 DYQSAVTYYSRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPSYAEAYNNR 327
Query: 558 TQFY----------QDL------------------------ANSEKALECLQQVLYIDKR 583
Y QD + KA++ + + + R
Sbjct: 328 AYLYIQQEKYQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNATEAIRFNSR 387
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
+++AY+ RGL +GL ++ A KD
Sbjct: 388 YARAYNNRGLGQYGLKNYQAAAKDF 412
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ G Y A FD+ +K + + +A R AR +++ E AI D I NPS
Sbjct: 430 GRARYAIGLYKDATKHFDKAIKINREHVDAYYYRSLARFDRKKYEDAIKDSNRVIARNPS 489
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A++ +G++ AL + VEA Q KA++ D
Sbjct: 490 YAAAYEIKGKSLLALNKPVEAKQAFDKAVKIYAQKQD 526
>gi|145483311|ref|XP_001427678.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394760|emb|CAK60280.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 137/265 (51%), Gaps = 6/265 (2%)
Query: 347 KLSFKWDMLKETSNEAKRN-KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASA 400
KL+ +D + +A +N KK+ + I K+I + D+ S+G A N+ KY +
Sbjct: 158 KLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEES 217
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +D+ ++ +P Y E +G A ++ E +I ++ +AI+ NP+ + + +G A
Sbjct: 218 IIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALC 277
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L + E+I + KA+E PN D + +G+ +F + ++ + ++L++ Y
Sbjct: 278 NLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYY 337
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL ++ +Y+++ + KAI+L+ N+ + + Q+ E+++ + + +
Sbjct: 338 CNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIEL 397
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +S+ Y +G L L +++++I
Sbjct: 398 NQNYSQYYCNKGQALFNLKKYEESI 422
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 125/245 (51%), Gaps = 5/245 (2%)
Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + I K+I + D+ S+G+A KY +I FD+ +K +P Y +
Sbjct: 110 KKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDKAIKLNPNYDDYYNS 169
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A ++ E +I +F +AI+ NP+ + + +G A + E+I + KA+E P
Sbjct: 170 KGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKAIELNP 229
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + +G + K + ++ + ++L+ + Y G AL ++ +Y+++ +
Sbjct: 230 NYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEESIIEY 289
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+L+ N+ + + Q+ E+++ + + +++ +S+ Y +G L L +
Sbjct: 290 DKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALCNLKK 349
Query: 601 HKKAI 605
++++I
Sbjct: 350 YEESI 354
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 120/255 (47%), Gaps = 14/255 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++G A N KY +I +D+ ++ +P Y + +G A + E +I +F +AI
Sbjct: 98 YYCNKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDKAI 157
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ + + +GQA L + E+I + KA+E PN D + +G K + +
Sbjct: 158 KLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEES 217
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG------- 555
+ + ++L+ Y G AL ++ +Y+++ + KAI+L+ N + +
Sbjct: 218 IIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALC 277
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
+L ++ + + +KA+E ++ + Y+ +GL L +++++I +
Sbjct: 278 NLKKYEESIIEYDKAIE-------LNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELN 330
Query: 616 MPHLIWNLTRWRNLC 630
+ + + + LC
Sbjct: 331 QNYSQYYCNKGQALC 345
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + I K+I + D+ +G A N KY +I +D+ ++ +P Y +
Sbjct: 246 KKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNS 305
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A + E +I +F +AI+ N + + + +GQA L + E+I + KA+E P
Sbjct: 306 KGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALCNLKKYEESIIEYDKAIELNP 365
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D + +G+ +F + ++ + ++L++ Y G AL ++ +Y+++
Sbjct: 366 NYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALFNLKKYEESIIEF 425
Query: 541 LKAIQLDRN 549
KAI+L+ N
Sbjct: 426 DKAIKLNPN 434
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++G A N KY +I +D+ ++ +P Y + +G A + E +I +F +AI
Sbjct: 336 YYCNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAI 395
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ N + + + +GQA L + E+I + KA++ PN AD +G+ N FK
Sbjct: 396 ELNQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPNDADSHFNKGVNNEVFK 450
>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
Length = 502
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C K + + D S+G+ G+Y AI FD +K +P P+ +G
Sbjct: 166 CCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKL 225
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI F AI+ P+ EA+ +G L + EAI++ A++++ N
Sbjct: 226 GQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLN 285
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G K + A+E+ +K + N Y G L + +Y++A E AI+ +
Sbjct: 286 KGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNP 345
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
NF +A+ +L ++A+EC + + ++AY+ +G+ L LGQH+ A+++
Sbjct: 346 NFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVEN 404
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS--KLSFKWDMLKETSNEAKRN 365
H+ + + ++ N ++Y+ + +K E+ L+ K+ K EA N
Sbjct: 195 HEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKY---KPNCEEAYLN 251
Query: 366 KKFCVTRISKSKS------ISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDP 412
K C+ ++ + K +++ ++ + A +N+G ++ AI FD +K +
Sbjct: 252 KGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYEL 311
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
P+ +G R+ + A+ +F AI+ NP+ +A+ +G L + EAI+
Sbjct: 312 CNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECC 371
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ A+++ PN A+ + +G+ FK AAVE+ +K + AY GL LS +G+
Sbjct: 372 NLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQ 431
Query: 533 YKKAEEAHLKAIQLDRNFLEAW 554
++A E AI+ + N EA+
Sbjct: 432 AQEAVENFNLAIKYNPNDAEAY 453
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 2/239 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI G+ AI FD +K EA + +G + +L+ AI +F AI+ N
Sbjct: 81 NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHN 140
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ +G LG+ EAI+ + A+++EP + D H +G+ K ++ A+E+
Sbjct: 141 INYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIEN 200
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + N Y G+ + +G++++A + AI+ N EA+ + L
Sbjct: 201 FDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLE 260
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGSRTMMPHLIWN 622
++A+E + + AY +G L L QH++AI+ DL+ P +N
Sbjct: 261 QYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYN 319
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 113/235 (48%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K + + D ++G+ G++ AI IF+ +K P EA + +G + + A
Sbjct: 206 KYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEA 265
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I +F AI+ + A+ +G + L + EAI++ A+++E + D + +G +
Sbjct: 266 IENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLY 325
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + AVE+ +K + + AY G L + +Y++A E AI+ + N EA+
Sbjct: 326 ELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAY 385
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ L + A+E + + + AY+ +GL L LGQ ++A+++ +
Sbjct: 386 YNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFN 440
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 20/320 (6%)
Query: 302 NGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNE 361
N V KL D A L + + S + NK ++ E+ L+ K++ E
Sbjct: 25 NNNQPVQQKLIHDKAILAEKHFYV---GISFLKLNKYQEAIENFD-LAIKYN---PNCAE 77
Query: 362 AKRNKKFCVTRIS-------------KSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
A NK C+ ++ K KS + LS+G++ G+ AI FD +
Sbjct: 78 AYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAI 137
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
K + Y A + +G + AI AI+ P +A+ +G LG+ EA
Sbjct: 138 KHNINYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEA 197
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I++ A+++EP + D + +G+ K A++ + +K + AY G+ L
Sbjct: 198 IENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLY 257
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +YK+A E AI+ N++ A+ + L ++A+E + + Y
Sbjct: 258 QLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTY 317
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
+ +G L+ L Q+++A+++
Sbjct: 318 YNKGACLYELRQYQEAVENF 337
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ F + ++ DP A R A ++A+ DFT AI ++
Sbjct: 75 TRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYRQSGRNDSALQDFTRAINAD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R + ALG A DLS+A+ P SA+ H RG+V AA+ D
Sbjct: 135 PNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGD 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G +L + ++ KA E + A+ ++ ++W + Y+
Sbjct: 195 FDAAIDRNPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAYRGLAYEKSG 254
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A+E Q+ ID + A G + G+
Sbjct: 255 RRQEAMESYQRASAIDPNNAVARQGLGRVQGGM 287
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS ++ PN A + RG + +N A+ D + ++LD + SAY+ LA
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G A + +AI D N+ A+ + L N E A L Q + + ++AY
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 589 HLRGLLLHGLGQHKKAIKDL 608
H RGL+ GQH+ AI D
Sbjct: 176 HARGLVRQAQGQHRAAIGDF 195
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 11/240 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+R + ++ +V G VN I+ +++ +P A RG A A
Sbjct: 31 TVSRTTATRQFAVLETDKSGATDVN-------IASLSDVIQRNPNDAAAYNTRGAAYARA 83
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AI+DFT+AIQ +P++ A+ R A G + A+QD ++A+ +PN +
Sbjct: 84 GSYNEAIADFTKAIQLDPNSASAYSNRALAYRQSGRNDSALQDFTRAINADPNYSAAYIG 143
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + ++ AA DLS ++L E+ AY GL + G+++ A AI DR
Sbjct: 144 RANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAI--DR 201
Query: 549 N-FLEA-WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N F+ A + Q +KA+E L ++ + + ++ RGL G+ ++A++
Sbjct: 202 NPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAYRGLAYEKSGRRQEAME 261
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ LS ++ + + +AY G A + G Y +A KAIQLD N A+ + Y+
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ AL+ + + D +S AY R L LG ++ A DLS R
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIR 166
>gi|262382113|ref|ZP_06075251.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
gi|262297290|gb|EEY85220.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
Length = 707
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 4/262 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD-- 607
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 608 --LSSGSRTMMPHLIWNLTRWR 627
+S SR ++ L R++
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQ 273
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEY 533
D ++ + +N AY L G+Y
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDY 311
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y A++ ++ L+ D I RG R +L A++D+ + I +
Sbjct: 198 NRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMD 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A RG R +G++ AI+D ++ EP++ + R ++ F+ D+ AV+D
Sbjct: 258 SRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYWGAVQD 317
Query: 506 LSACVK 511
+K
Sbjct: 318 YDVVLK 323
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYWGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|408527323|emb|CCK25497.1| hypothetical protein BN159_1118 [Streptomyces davawensis JCM 4913]
Length = 1064
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R RG + G+ A++ F L+ DP L R A R + A++DFT A+
Sbjct: 581 RADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAEAHRQSRRYDDAVADFTAALD 640
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ RGQA G +A+ DL+ AL+ P A L +RG + + + ++ AV
Sbjct: 641 RHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAV 700
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D +A + D + A + G A G + +A A++LD + A + +++
Sbjct: 701 TDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHRE 760
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++A+ L L + R++ A RG HG G++ +A+ DL++
Sbjct: 761 AGRYDEAVADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAA 808
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 89/209 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G+Y A++ L P Y AL RG A + A++DFT A+ +
Sbjct: 651 SRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAVTDFTAALGHD 710
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG A G EAI D + AL + L ERG V+ + ++ AV D
Sbjct: 711 PDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHREAGRYDEAVAD 770
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A + L A G A G Y +A A++LD A H + +
Sbjct: 771 LTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARSHRVEAHYLAG 830
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
S++ALE L V+ + +RG +
Sbjct: 831 RSQEALEDLSTVMELQPSSPWPLAVRGFM 859
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 4/184 (2%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++D A+ P A RG G EA+ D + ALE +P+ A +L +R
Sbjct: 561 EEGMADLERAVALAPDDARARADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAE 620
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + + ++ AV D +A LD+ + Y G A G Y A A+ L
Sbjct: 621 AHRQSRRYDDAVADFTAA--LDRHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPE 678
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A + +++ ++A+ L D F+ A RG G+H +AI D +
Sbjct: 679 YAWALAQRGEAHREAERYDEAVTDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQT 738
Query: 610 SGSR 613
+ R
Sbjct: 739 AALR 742
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y A++ L P Y AL RG A + A++D T A++ +
Sbjct: 754 RGEVHREAGRYDEAVADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDA 813
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ A R +A G S EA++DLS +E +P+S L RG ++
Sbjct: 814 TLDWARSHRVEAHYLAGRSQEALEDLSTVMELQPSSPWPLAVRGFMH 860
>gi|334365803|ref|ZP_08514752.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
gi|313157909|gb|EFR57315.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
Length = 657
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 61 RGIAKYNLNDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 120
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A ++
Sbjct: 121 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 180
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G Y +AE KAI+ D +L ++ + Y +
Sbjct: 181 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 240
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AL +V+ +D S Y R +L +G + +A++D
Sbjct: 241 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALED 281
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 128 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 187
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RRG EA D +KA+E + R +V A+ D
Sbjct: 188 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 247
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N Y + + IG+Y +A E + K N + + + Y L
Sbjct: 248 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 307
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
EKA E + + F+ AY RG L L + A KD + + + +
Sbjct: 308 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKDRDTAQKKIAEY 360
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RG++Q +Y +A++ F ++ +P P + R T RA +QR
Sbjct: 482 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 541
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +AI+ P ++ R RA G EA +D +
Sbjct: 542 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 601
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E PN A+ + RGI+ KD D+S +L
Sbjct: 602 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 640
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++A ++ A++ F+ AI+ NPS + R RA + + + +I + + +
Sbjct: 480 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 539
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
+ + A+ L+ + + + AV DL+ +KL + AY+Y A L ++ G
Sbjct: 540 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 594
Query: 535 KAEEAHLKAIQLDRNFLEAW 554
+A E + KAI+L+ NF EA+
Sbjct: 595 EAFEDYTKAIELNPNFAEAY 614
>gi|220909868|ref|YP_002485179.1| hypothetical protein Cyan7425_4508 [Cyanothece sp. PCC 7425]
gi|219866479|gb|ACL46818.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 836
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V +G A++ +++LK + G GTA + AI+ + +A++ P+ A
Sbjct: 570 VGQGNIRDALNCLNKLLKFETNSSLLWFGHGTALGKSGAYKEAIASYDQALKLKPNDDVA 629
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A LG EA+ ++AL+F+P +D L RGIV K + A+ +K
Sbjct: 630 WNERGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQAKLGQYEDAIASFDQSLK 689
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDL 564
+ ++ + G+ L ++G YK+A ++ KAI+++ + +AW G L F Q +
Sbjct: 690 IKPDDPENWYSRGIVLGNLGRYKEAIASYDKAIEINPEYSDAWINRSASLGDLKLFNQAI 749
Query: 565 ANSEKALE 572
A+ ++AL+
Sbjct: 750 ASCDQALK 757
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI Q G+Y AI+ FDQ LK P PE RG + AI+ + +AI+ N
Sbjct: 666 NRGIVQAKLGQYEDAIASFDQSLKIKPDDPENWYSRGIVLGNLGRYKEAIASYDKAIEIN 725
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER-------GIVNFKFKD 498
P +AW R + L +AI +AL+++P+S L + G V K+
Sbjct: 726 PEYSDAWINRSASLGDLKLFNQAIASCDQALKYKPDSHLALFNKACFHAIQGEVELTLKN 785
Query: 499 FNAAVEDLSACVK 511
AV +SA V+
Sbjct: 786 LQKAVA-ISAEVR 797
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G+Y A+ ++Q LK P + L RG +A + E AI+ F ++++ P
Sbjct: 633 RGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQAKLGQYEDAIASFDQSLKIKP 692
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E W RG LG EAI KA+E P +D R K FN A+
Sbjct: 693 DDPENWYSRGIVLGNLGRYKEAIASYDKAIEINPEYSDAWINRSASLGDLKLFNQAIASC 752
Query: 507 SACVK 511
+K
Sbjct: 753 DQALK 757
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A + K A+ FDQ+L +P +AL +G A A + EAA+ + A++
Sbjct: 43 FNRGLALLKIKKPEEALDSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALEI 102
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W ++G A A L ++ +I KA+E EP + RG V K ++ A+E
Sbjct: 103 NPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYARGTVTGKTGNYEEALE 162
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ +N A GL L+++ +Y +A E I+ +AW L
Sbjct: 163 CFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLIKL 222
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+E+ALEC+ L A + +G+LL+ L +++ A K +
Sbjct: 223 GKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFT 267
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A V + A F + + DP Y +AL +G A + + E A+ F ++ N
Sbjct: 350 NRALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQN 409
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A K RG LG EA+ L+++LE EP + + ++G++ F A++
Sbjct: 410 PEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKA 469
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +L +N + + G AL S+ Y++A E + ++L+ + W + L
Sbjct: 470 LEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLG 529
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+E+ALE ++ + + F A+ RGL+L + ++KA
Sbjct: 530 RTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKA 568
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G Y A+ F+ L+ +P +A +G A + A+ F I+
Sbjct: 146 ARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREK 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AWK++ + LG++ EA++ + L P S L+++GI+ + + A +
Sbjct: 206 PRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKT 265
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ NK + GLAL + A +A +AI+LD + EAW + L
Sbjct: 266 FTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLE 325
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+ALE VL I + ++ R L L L +A K S
Sbjct: 326 VYEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFS 369
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EGKY A+ FD +L+++P + +A RGT +E A+ ++++ P W
Sbjct: 392 EGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWL 451
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G G+ A++ L K E +P++ +G + + A+ED ++L+
Sbjct: 452 QQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLN 511
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + G+ L +G ++A EA KA+ L +F +AW + + + EKA E
Sbjct: 512 PYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEA 571
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+VL + + + RG L LG+ + A++
Sbjct: 572 FDEVLKTNPEDLDSIYNRGTALLKLGKTETALE 604
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
CV + +S +GI +Y A F +ILK +P E + +G A
Sbjct: 231 CVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQL 290
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
L AI F EAI+ +P+ EAW + A L EA++ LE P + +I +
Sbjct: 291 LRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYPETKEIWYN 350
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + K + F A + S +LD A G L+ G+Y++A +A ++ +
Sbjct: 351 RALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNP 410
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F++A L E+AL+ L Q L + + +GL+L G+ + A+K L
Sbjct: 411 EFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKAL 470
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ ++ GK+ A+ +++ + P + +G A E A+ DF E ++
Sbjct: 451 LQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRL 510
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W +G LG + EA++ KA+ P+ D RG++ D+ A E
Sbjct: 511 NPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASE 570
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + E+ + G AL +G+ + A E K + L+ ++ + L L
Sbjct: 571 AFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKL 630
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+ALE +++ + K +G +G++ A++
Sbjct: 631 GKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQ 672
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q+ E +I+ F + + + A RG A + + EA+ + L FEP
Sbjct: 11 RGLGLIKQKRYEKSINVFNKIVDKDSGHTGALFNRGLALLKIKKPEEALDSFDQVLHFEP 70
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ D L+++GI + F AA+E ++++ +N + GLA + + + + +
Sbjct: 71 ENFDALYKKGIALATLEKFEAALETYDNALEINPDNPKIWYQKGLAFAELEKNEASILCF 130
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+L+ AW N E+ALEC + L I+ + S A + +GL+L L +
Sbjct: 131 EKAIELEPECGSAWYARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEK 190
Query: 601 HKKAIKDLSSGSRTMMPH 618
+ +A++ S R H
Sbjct: 191 YGEALECFDSLIREKPRH 208
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 6/223 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA K+ +A+ +D L+ +P P+ +G A A + EA+I F +AI+ P
Sbjct: 79 KGIALATLEKFEAALETYDNALEINPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
G AW RG G EA++ ALE P ++D + +G+V + + A+E
Sbjct: 139 ECGSAWYARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECF 198
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEE---AHLKAIQLDRNFLEAWGHLTQFYQD 563
+ ++ +K A+ +L +G+ ++A E A L+ + L G L +
Sbjct: 199 DSLIREKPRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILL---NE 255
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L+ E A + ++L I+ + + +GL L L + AIK
Sbjct: 256 LSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIK 298
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 106/539 (19%), Positives = 221/539 (41%), Gaps = 29/539 (5%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
+ F QLE + ++ + AL+ P + +G + + EEA +E ++
Sbjct: 771 KGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAAC----AFESSV 826
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
+ ++K+ LE R++ C ++ ++L E+ L N + S H K
Sbjct: 827 RLNPEMKEALEY----------RAI-CLFETEQYKAALKALEAVLEGNPE--NLSALHKK 873
Query: 195 SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
+ + + +ET + DP+ + E K + +SG N L E
Sbjct: 874 AICFLQLKKYKSGAETLLRVLELDPN-----NKEVKFELGIASFESG-EYNKALSLFEEV 927
Query: 254 HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
GS D S +++ E+N + + I + + +E++ + N + + + +
Sbjct: 928 SEGSDD-SFVYCPEKNSYELNNSEQN---VSEQGISEQNFSEQNNSEQNFSEQNNSEQNF 983
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS-FKWDMLKETSNEAKRNKKFCVTR 372
S+++ N +++ +S+ + S K S+ + S+ K S F W L EA +R
Sbjct: 984 SEQSISEQNNSNQKFSEQNNSKQKFSEQSISKEKYSSFYWKGLVLIRLEAYERALEVFSR 1043
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++++ + V+ +GI+ ++ A F+++L+ DP Y + G + E
Sbjct: 1044 LTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKVLELDPAYQDTCYQLGLSYFELGNFE 1103
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI F A++ +P +A R A E+ + L+ P+ + L
Sbjct: 1104 EAIRVFESALKMDPENLDALYMRSLALLRSKRYGESASGFREVLKRNPSDTEALAHLSTA 1163
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+FK + A+ + + E K+ G+AL ++GE K+A ++L +
Sbjct: 1164 SFKQGFYEEALGLFDQVLSKNPERKTVLFRKGVALKALGEVKRASTIFDSVLKLKPDCTY 1223
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A + +L +A+E + L ++ Y+ RG+ LG ++A++ +
Sbjct: 1224 ALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENA 1282
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D R +A + +Y + S F ++LK +P EAL TA Q E A+ F
Sbjct: 1119 NLDALYMRSLALLRSKRYGESASGFREVLKRNPSDTEALAHLSTASFKQGFYEEALGLFD 1178
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ + NP R+G A ALGE A L+ +P+ L ++ +F+ +++
Sbjct: 1179 QVLSKNPERKTVLFRKGVALKALGEVKRASTIFDSVLKLKPDCTYALEQKAYTHFELEEY 1238
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AVE ++ ++ + Y Y G+A +G +++A + A+ L E +
Sbjct: 1239 PEAVEAFKTALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGI 1298
Query: 560 FYQDLANSEKALECLQQVL 578
Y + EKA+E +L
Sbjct: 1299 AYFENREYEKAVEIFNAIL 1317
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 1/233 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ N +Y +A F +L+ P PE+L G EAA+ F +A NP
Sbjct: 1724 RGLVLFNLSEYEAAAETFGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNP 1783
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E L E+I + L+ P + D+L+ +GI K + + A++
Sbjct: 1784 KNEETLYNAATTLIKLNRPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAF 1843
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D EN A +G+ Y+ A A +A+ ++ ++ +L +
Sbjct: 1844 DLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEE 1903
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
E AL ++L I +A + RG++L LG++ +AI + R + P +
Sbjct: 1904 YEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTFNEILR-LYPEM 1955
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A + +Y A+ F++ L+ +P + +G E A+ F +A+
Sbjct: 485 MNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSL 544
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AWK RG A+ + +A + + L+ P D ++ RG K A+E
Sbjct: 545 RPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALE 604
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L+ + L +A + +G+ ++A E K + L+ +F ++
Sbjct: 605 CFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEI 664
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ AL+ QVL +A++ +GL L L + ++AI
Sbjct: 665 GKYDTALQAFDQVLSEKPESREAWYRKGLALIKLKRFEEAI 705
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ K+ +D +RG A + GK +A+ F++IL +P YP+ L A+A + E
Sbjct: 575 VLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQE 634
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ F + NP + +R+G+ +G+ A+Q + L +P S + + +G+
Sbjct: 635 EALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLA 694
Query: 493 NFKFKDFNAAVEDLSACVKLDKENK 517
K K F A+ + + NK
Sbjct: 695 LIKLKRFEEAITAFDEVIVRNLNNK 719
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
K+ S+ DF +RG+ + Y A FD++LK +P +++ RGTA
Sbjct: 538 FEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLG 597
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ F + + NP + A+A LG+ EA++ K P I +
Sbjct: 598 KTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRK 657
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
G + ++ A++ + E++ A+ GLAL + +++A
Sbjct: 658 GKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALIKLKRFEEA 704
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAI F + ++ P A + W G A L + +A++ A+E +P + G+
Sbjct: 1562 EAAIEIFEKLLEVKPEASDLWYVAGLALRGLDQDEQAVEAFENAVELDPALEAAWEQIGL 1621
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A + S+ + L +N +A A + +++A + K + +FL
Sbjct: 1622 SLLRLNMYEEASQAFSSALTLKPDNVNALYSRSEASFQLQHFEEAAQDLEKVLLSAPDFL 1681
Query: 552 ---EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
EA L +L EKALE VL D +A + RGL+L L +++ A
Sbjct: 1682 NSIEACYRLGIARMELQECEKALEAFDIVLQQDPAHREALYYRGLVLFNLSEYEAA 1737
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 19/257 (7%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RGIA G + A+ F+ L PE G A RE E A+ F
Sbjct: 1257 DLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGIAYFENREYEKAVEIFNAI 1316
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN- 500
+ S E ++ A L + E + + LE E + +I + G KF++ N
Sbjct: 1317 LDSGALDLEILYKKALALFELEKPEEVVSTVYTLLELETENFNI-KDAG----KFEEENY 1371
Query: 501 ------AAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + +A EN A+ L +L +G Y++A K +
Sbjct: 1372 EESAGKESIGEENAGEIPAFENTKAFEELLEKFTFSLIQLGRYEEALLPLGKLTASESAS 1431
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EA +Q+L SE+ALE ++ ++ F KA++ RGL+L LG + +A+
Sbjct: 1432 KEALYSKGIVFQELGRSEEALEIFSELRFLYPDFEKAWYRRGLILFSLGYYVEALDSFEQ 1491
Query: 611 GS---RTMMPHLIWNLT 624
+ +T +P I L+
Sbjct: 1492 AALEDQTEIPEEIDELS 1508
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA Y A+ FD L++DP +A+ G Q+ E A F EA+ NP
Sbjct: 1826 KGIAFCKLEMYREALKAFDLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINP 1885
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ K G + A + E +A++ + L P+ ++ RG++ K + A+
Sbjct: 1886 WHEQSLKYLGISLAKIEEYEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTF 1945
Query: 507 SACVKLDKENKSA 519
+ ++L E A
Sbjct: 1946 NEILRLYPEMADA 1958
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 410 EDPMYPEALIGRGTARAF----QRELE---AAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
E+P Y + AR + Q +LE A+ F A++ P++ W RG + +
Sbjct: 753 ENPDYEDENSDYENARTYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRI 812
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
EA ++ P + L R I F+ + + AA++ L A ++ + EN SA
Sbjct: 813 NMLEEAACAFESSVRLNPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHK 872
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + +YK E L+ ++LD N
Sbjct: 873 KAICFLQLKKYKSGAETLLRVLELDPN 899
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ + Y +A FD+ L +P + ++L G + A E E A+ F ++
Sbjct: 1859 SVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEEYEDALRTFDRLLRIR 1918
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
P +A RG LG+ EAI ++ L P AD
Sbjct: 1919 PHDVQAMNYRGVILGKLGKYTEAINTFNEILRLYPEMAD 1957
>gi|332709397|ref|ZP_08429359.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
gi|332351943|gb|EGJ31521.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
Length = 932
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A +Y AI+ +D++++ P P++ RG A R E A+ F +
Sbjct: 671 DIWYQRGMALWELQQYQDAIASYDKVIEIKPDDPDSWYQRGLALMELRRYEGAVVAFNKV 730
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P +AW RG L +AI KALE +PN +RG+ +
Sbjct: 731 VKFKPDHYKAWLNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEE 790
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A V++ +N A+ G+AL + Y++A + KAI+L+ + +AW +
Sbjct: 791 AFGSFDQAVQVQPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTL 850
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L +++ALE + + L I ++ Y+ + ++ G+ A+++L
Sbjct: 851 VKLEQNDQALESINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQA 900
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ +Y AI+ +D+ L+ P Y +A + RG A ++ E A F +A+Q
Sbjct: 742 LNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEEAFGSFDQAVQV 801
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A L EA+ KA+E +S + RG K + + A+E
Sbjct: 802 QPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTLVKLEQNDQALE 861
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ E + Y + SS G A E +AI+L+ + E
Sbjct: 862 SINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQAIELNPRYRE 909
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + +Y A+ F++++K P + +A + RG R E AI+ + +A++ P
Sbjct: 710 RGLALMELRRYEGAVVAFNKVVKFKPDHYKAWLNRGMTLRRLRRYEDAIASYDKALEIQP 769
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW RG A L + EA +A++ +P++ RG+ + + AV
Sbjct: 770 NYHQAWVDRGVALGMLQKHEEAFGSFDQAVQVQPDNTVAWLNRGMALDVLERYQEAVASF 829
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ ++ A+ Y G L + + +A E+ +A+++ + + + Y
Sbjct: 830 DKAIELNSDSHKAWNYRGSTLVKLEQNDQALESINRALEIQPEYAAGYYNKAIVYSSQGR 889
Query: 567 SEKALECLQQVLYIDKRF 584
A+E L+Q + ++ R+
Sbjct: 890 VTLAVENLEQAIELNPRY 907
>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 515
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ EG AI+ F +K D Y EA R E +I+D+++ I P
Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RGQ++A G+ VEAI D +KA+ PN RG +F+ A++D
Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + AY G+Y+ A + + K I L + EA+ + +
Sbjct: 359 NKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGD 418
Query: 567 SEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAIKDLS 609
A++ +++ K+F S AY RG + + K+A+ D +
Sbjct: 419 KTAAIKEYDEIV---KKFPNESAAYANRGFFNMNIKKDKEAMDDFN 461
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++ G Y +AI+ FD+ + P Y A RG +++ + + AI+DFT AI+ + S
Sbjct: 206 GLCKMELGDYPAAITNFDKAIDIKPKYTAAFSKRGMSKSKEGFRDEAIADFTTAIKYDSS 265
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA++ R L E+I D SK + +P++ RG +F A+ D +
Sbjct: 266 YAEAYQNRAHELFLLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYN 325
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L AY Y G + S + + A + KAIQLD N A+ + ++ +
Sbjct: 326 KAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDY 385
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E A++ + + + ++ +AY + L+ +G AIK+
Sbjct: 386 EGAIKDYNKCISLKPQYEEAYFQKANTLYMMGDKTAAIKE 425
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 9/298 (3%)
Query: 320 DSNTNSESYSKSSISDNKSSDS--TESRSKLSFKWDMLKETSNEAK------RNKKFCVT 371
+S N+ Y+ SSI + K D + R SF W + ++ K N +
Sbjct: 97 ESAFNAGKYT-SSIDEVKVGDVYIAKIRESKSFAWIKITHIEDDGKSKATGGNNNDYIEF 155
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+ +I + G+ +G + A F DP EA G + +
Sbjct: 156 EYTVFSNIDTHGTFNEGLELFKKGNFIGAYDKFKAAAVADPNGYEAYYYMGLCKMELGDY 215
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AAI++F +AI P A+ +RG +++ G EAI D + A++++ + A+ R
Sbjct: 216 PAAITNFDKAIDIKPKYTAAFSKRGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAH 275
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F + ++ D S + L +N AY G + + G++ +A + KAI L NF
Sbjct: 276 ELFLLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFT 335
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + L N A++ + + +D AY R G ++ AIKD +
Sbjct: 336 YAYFYRGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYN 393
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 108/215 (50%), Gaps = 2/215 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y +I+ + +++ P +A GRG ++A F + +EA I+D+ +AI P+ A+
Sbjct: 282 RYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEA-IADYNKAIVLYPNFTYAYFY 340
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +++ L +AI+D +KA++ +PN R + D+ A++D + C+ L
Sbjct: 341 RGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKP 400
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + AY L +G+ A + + + ++ N A+ + F ++ ++A++
Sbjct: 401 QYEEAYFQKANTLYMMGDKTAAIKEYDEIVKKFPNESAAYANRGFFNMNIKKDKEAMDDF 460
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +++ +AY R +L + + A DL+
Sbjct: 461 NKAITLNENNPEAYRYRAVLKSEIKDKEGACADLA 495
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ ++ AI F++ ++ DP A R + + + E AI D+ + I
Sbjct: 339 FYRGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISL 398
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EA+ ++ +G+ AI++ + ++ PN + RG N K A++
Sbjct: 399 KPQYEEAYFQKANTLYMMGDKTAAIKEYDEIVKKFPNESAAYANRGFFNMNIKKDKEAMD 458
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + + L++ N AY Y + S I + + A KA+ L
Sbjct: 459 DFNKAITLNENNPEAYRYRAVLKSEIKDKEGACADLAKAVAL 500
>gi|67921469|ref|ZP_00514987.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67856581|gb|EAM51822.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 248
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 375 KSKSISVDF--RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K+ +++VD + +GI + G Y A+ F+Q++ E+P A RG A + + E
Sbjct: 50 KTSALTVDTVEMVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFE 109
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT A++ +P EA+ RG LGE +AI D KALE PN A + G+
Sbjct: 110 QALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA 169
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A D + V +D AY GLAL +GE + A
Sbjct: 170 HLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENA 213
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
++ +G ++ + + A+ DF + I NP A+ RG A ++LG+ +A+ D + AL+
Sbjct: 61 MVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALK 120
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + + A+ D ++++ + A LGLA
Sbjct: 121 LDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA----------- 169
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
HL LA + + + ID + +AY+ RGL L
Sbjct: 170 ------------------HLNSGSPGLAKID-----FTEAVMIDPLYGEAYYNRGLALLD 206
Query: 598 LGQHKKAIKDL 608
LG+ + AI D
Sbjct: 207 LGERENAIADF 217
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G++ A++ F LK DP EA + RG E E AI+D+ +A++
Sbjct: 96 FNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEI 155
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A G A G A D ++A+ +P + + RG+ + A+
Sbjct: 156 NPNDAFAQNNLGLAHLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENAIA 215
Query: 505 DL 506
D
Sbjct: 216 DF 217
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A++ + ++A++ +I NR + +S L + + D AL+LDP +++AY+ +
Sbjct: 73 NYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNR 132
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G + LG E+A++ +EK E
Sbjct: 133 GNVYLQLGEDEKAIADYEKALE 154
>gi|423332155|ref|ZP_17309939.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
CL03T12C09]
gi|409229996|gb|EKN22868.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
CL03T12C09]
Length = 707
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS I+ D L+ G + Y +I F+Q++K P E R A+ + +
Sbjct: 15 ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L +
Sbjct: 75 GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ KD+N A + + + Y G G+ KA + KAI++D +
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----L 608
A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254
Query: 609 SSGSRTMMPHLIWNLTRWR 627
S SR ++ L R++
Sbjct: 255 SMDSRNLIARFNRGLLRFQ 273
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR---TMMPHLI 620
+ ++ +A+E V+ + AY+ R LL G ++ A++D + T +P +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|255014061|ref|ZP_05286187.1| TPR repeat-containing protein [Bacteroides sp. 2_1_7]
gi|410101707|ref|ZP_11296635.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
gi|409239505|gb|EKN32289.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
Length = 707
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS I+ D L+ G + Y +I F+Q++K P E R A+ + +
Sbjct: 15 ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L +
Sbjct: 75 GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ KD+N A + + + Y G G+ KA + KAI++D +
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----L 608
A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254
Query: 609 SSGSRTMMPHLIWNLTRWR 627
S SR ++ L R++
Sbjct: 255 SMDSRNLIARFNRGLLRFQ 273
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR---TMMPHLI 620
+ ++ +A+E V+ + AY+ R LL G ++ A++D + T +P +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 763
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 21/311 (6%)
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
H ++ + S + + NS+ Y + NK+ T S + F AK N
Sbjct: 429 HQEIKASLLSFSWNLINSKRYQDALRCLNKALTFTPDSSDILF-----------AKGNAL 477
Query: 368 FCVTRISK---SKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
F + R+ + S +++F+ +RGIA N G+ AI+ +DQ L P +A
Sbjct: 478 FNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDDHQA 537
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG A LE AI+ + +A+ P AW RG A LG EAI +AL
Sbjct: 538 WYNRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALN 597
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+P+ + RGI F A+ + + A+ G AL +G ++A
Sbjct: 598 FKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAI 657
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ +AI++ + +AW + L E+A+ + L I A++ +
Sbjct: 658 ASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGL 717
Query: 598 LGQHKKAIKDL 608
LG AI++L
Sbjct: 718 LGNVDLAIENL 728
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L P A RG A LE AI+ + +A+
Sbjct: 540 NRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFK 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +AL F+P+ + + RG + A+
Sbjct: 600 PDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIAS 659
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G AL + ++A + +A+++ + AW + Y L
Sbjct: 660 FDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLG 719
Query: 566 NSEKALECLQQVLYIDKRF 584
N + A+E LQQ + ++ ++
Sbjct: 720 NVDLAIENLQQSINLNPKY 738
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA V G+ AI+ +DQ L P +A RG A LE AI+ F +A+
Sbjct: 574 NRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFK 633
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +A++ + + + G K + A+
Sbjct: 634 PDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIAS 693
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+K+ + +A+ +G A E ++I L+ + E
Sbjct: 694 FDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQSINLNPKYRE 740
>gi|425449701|ref|ZP_18829537.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
gi|389769861|emb|CCI05465.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
Length = 957
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ KY A+ +++ ++ +P + A RG + Q++ + A+SD+ +AI N
Sbjct: 707 NRGNLYRDQQKYKLALDDYNKAIELNPNHAGAYYNRGLLYSDQKKYDLALSDYDKAIDIN 766
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ EA+ RG L E E A+ D KA+E PN A + RG + + ++ A+
Sbjct: 767 PNYAEAYVNRG-VLYRLQEKYELALADYDKAIELNPNDAVAYYNRGNLYKNLQKYDLALS 825
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + ++ AY G+ +Y+ A + KAI ++ + EA+ Y
Sbjct: 826 DYSKAIDINPNYAEAYNNRGVLYRLQEKYELALADYDKAIDINHDLAEAYFGRGILYYHQ 885
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
E AL L QV+ I+ ++AY RG+L L Q +KA DL +
Sbjct: 886 KKYELALADLTQVIDINPNLAQAYLGRGVLYAELKQTEKAKIDLQQAA 933
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 6/246 (2%)
Query: 366 KKF---CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
KKF + R S S DF S G + Y A+++ +Q + P P +
Sbjct: 617 KKFHSSILQRQSVVYSFLGDFSTSAGREREARENYEQALTVINQAISLVPNNPNHYNEKS 676
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPN 481
+ + + + ++ T+AI+ P A W RG + A+ D +KA+E PN
Sbjct: 677 SVLSRLKRYDEGLAAITQAIELAPRA--VWYGNRGNLYRDQQKYKLALDDYNKAIELNPN 734
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG++ K ++ A+ D + ++ AY G+ +Y+ A +
Sbjct: 735 HAGAYYNRGLLYSDQKKYDLALSDYDKAIDINPNYAEAYVNRGVLYRLQEKYELALADYD 794
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L+ N A+ + Y++L + AL + + I+ +++AY+ RG+L ++
Sbjct: 795 KAIELNPNDAVAYYNRGNLYKNLQKYDLALSDYSKAIDINPNYAEAYNNRGVLYRLQEKY 854
Query: 602 KKAIKD 607
+ A+ D
Sbjct: 855 ELALAD 860
>gi|168705001|ref|ZP_02737278.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
Length = 518
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G++A A++ F + + DP RG + R+ +AAI DFT++I+ P
Sbjct: 253 RGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAP 312
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +RG A L E+ A+ D ++A++ P+S R + N + D +AAV D
Sbjct: 313 DDPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADA 372
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
SA ++ + ++ SAY IG+ A E H KA ++D + HL
Sbjct: 373 SAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFEIDPDDAATLNHL 423
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A G++A A++ F Q ++ P Y EA R TA +L+AA++D+T A++
Sbjct: 47 FHRGNAYAAAGRHAEAVADFTQAVELRPDYAEAYHNRATAHVDAGDLDAALADYTRAVEL 106
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A R + A D A + P++ + R + AV
Sbjct: 107 DPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVT 166
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A +++ + AY Y ++L ++ +A A++L EA+ + Y
Sbjct: 167 DYTAALRISPRSARAYLYRAMSLEALDRTAEALTDLSTALRLQPTSAEAFWQRARVYAAC 226
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EKA+ +L +D + + A +LRG+ LG+H KA+ D +
Sbjct: 227 DEHEKAVADFTWLLKLDPKHADALNLRGVSHAELGEHAKAVADFT 271
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 34/258 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA----------- 434
+R A V+ G +A++ + + ++ DP P+A+ GR + Q+ +AA
Sbjct: 82 NRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLA 141
Query: 435 -----------------------ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
++D+T A++ +P + A+ R + AL + EA+ D
Sbjct: 142 PDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEALDRTAEALTD 201
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
LS AL +P SA+ +R V + AV D + +KLD ++ A G++ + +G
Sbjct: 202 LSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLRGVSHAELG 261
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
E+ KA +AI +D N + W + + +++ A++ + + + AY R
Sbjct: 262 EHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQR 321
Query: 592 GLLLHGLGQHKKAIKDLS 609
G H L + +A+ D +
Sbjct: 322 GYAFHELREADRAVADFT 339
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 18/238 (7%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+ A A++ L+ P EA R A E E A++DFT ++ +P +A R
Sbjct: 194 RTAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLR 253
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A LGE +A+ D ++A+ +PN RG+ + + +D AA++D + ++L +
Sbjct: 254 GVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPD 313
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-----A 570
+ +AY G A + E +A +AI L + + F + LAN K A
Sbjct: 314 DPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPY-----FGRALANRRKGDLHAA 368
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLG-------QHKKAIKDLSSGSRTMMPHLIW 621
+ V+ + + AY+LR L H +G H+KA + + + HL W
Sbjct: 369 VADASAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFE-IDPDDAATLNHLAW 425
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 4/216 (1%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ R A + E A+ F+ AI P+ E + RG A AA G EA+ D ++A+E
Sbjct: 12 LVRRAHAYTRRAEYPKALEAFSAAIDLEPADAELYFHRGNAYAAAGRHAEAVADFTQAVE 71
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ A+ H R + D +AA+ D + V+LD E+ A S + A
Sbjct: 72 LRPDYAEAYHNRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAF 131
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ A +L + + + + L E A+ L I R ++AY R + L
Sbjct: 132 ADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEA 191
Query: 598 LGQHKKAIKDLSSGSRTMMP---HLIWNLTRWRNLC 630
L + +A+ DLS+ R + P W R C
Sbjct: 192 LDRTAEALTDLSTALR-LQPTSAEAFWQRARVYAAC 226
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
+R A + K+ A++ + L+ P A + R + A R EA ++D + A++
Sbjct: 149 FNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEALDRTAEA-LTDLSTALR 207
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P++ EA+ +R + AA E +A+ D + L+ +P AD L+ RG+ + + + AV
Sbjct: 208 LQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLRGVSHAELGEHAKAV 267
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + + +D + + + GL+ + + + A + K+I+L + A+ + +
Sbjct: 268 ADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFHE 327
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L +++A+ + + + + Y R L G A+ D S+
Sbjct: 328 LREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADASA 374
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I++D +RG++ +AI F + ++ P P A + RG A RE
Sbjct: 271 TRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFHELRE 330
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++DFT AI P +G + R A G+ A+ D S +E P S + R
Sbjct: 331 ADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADASAVIERNPQSDSAYNLRA 390
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+ + D A+ED ++D ++ + +L
Sbjct: 391 SLRHQIGDLVGALEDHQKAFEIDPDDAATLNHLA 424
>gi|113475260|ref|YP_721321.1| hypothetical protein Tery_1568 [Trichodesmium erythraeum IMS101]
gi|110166308|gb|ABG50848.1| protein of unknown function DUF323 [Trichodesmium erythraeum
IMS101]
Length = 820
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 97/198 (48%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E+ +G QR+ + AI++F +AI+ NP EA+ RG G+ A+ D ++A
Sbjct: 318 ESYFNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQA 377
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++F P + + +GI+ K ++ A+ + + +KL+ + Y G+ ++ +Y
Sbjct: 378 IKFNPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDL 437
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A +AI+L+ + EA+ + Y + + AL Q + +++KAY+ RGL+
Sbjct: 438 AIAEFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVY 497
Query: 596 HGLGQHKKAIKDLSSGSR 613
++ I D ++
Sbjct: 498 KTQRNIERVISDFEKAAK 515
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ N+ KY AI+ F+Q +K +P Y EA RG Q + + A+ D+ +AI+
Sbjct: 321 FNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIKF 380
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + +G G+ A+ + ++A++ P + + + RGIV + ++ A+
Sbjct: 381 NPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDLAIA 440
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + +KL+ + AY G ++ G+Y A +AI+ + +A+ + Y+
Sbjct: 441 EFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVYKTQ 500
Query: 565 ANSEKAL 571
N E+ +
Sbjct: 501 RNIERVI 507
>gi|428226949|ref|YP_007111046.1| hypothetical protein GEI7407_3527 [Geitlerinema sp. PCC 7407]
gi|427986850|gb|AFY67994.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 575
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG A Y A++ +++ + + Y A RG +Q LE AI+++ AI++
Sbjct: 308 VSRGNALRAMRDYPGALADYERAIAINSNYAPAYNNRGLVYRYQNNLEGAIAEYGRAIEA 367
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS EA+ R A AA + I D S+A+ A + R + F+ D+ A+E
Sbjct: 368 DPSYAEAYNNRAYAYAAQRNYEQVIADASQAIRINGKYAAAYNVRSLARFEKGDYQGALE 427
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
D + A+ G A +G+ ++A + +AI+L+ ++A+ + L +F
Sbjct: 428 DGHRAIDSSDGYADAFFNRGRARLRLGDPREATKDLDRAIELNEGMVDAYYYRGLARF-- 485
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
D E A++ +VL D ++ AYH RGL L + +AI D
Sbjct: 486 DREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLKKMPQAIAD 530
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + AI+ + + ++ DP Y EA R A A QR E I+D ++AI+ N
Sbjct: 343 NRGLVYRYQNNLEGAIAEYGRAIEADPSYAEAYNNRAYAYAAQRNYEQVIADASQAIRIN 402
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R AR G+ A++D +A++ AD RG + D A +D
Sbjct: 403 GKYAAAYNVRSLARFEKGDYQGALEDGHRAIDSSDGYADAFFNRGRARLRLGDPREATKD 462
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L ++L++ AY Y GLA +Y+ A + + + + D ++ A+ H YQ L
Sbjct: 463 LDRAIELNEGMVDAYYYRGLARFDREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLK 522
Query: 566 NSEKALECLQQVLYIDKRFSK 586
+A+ QQ + + +R S
Sbjct: 523 KMPQAIADWQQAIALYERQSN 543
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AI+ +++ L +P ++ RG A R+ A++D+ AI N + A+
Sbjct: 284 GDQRGAIAFYERALSLEPNNVAVIVSRGNALRAMRDYPGALADYERAIAINSNYAPAYNN 343
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AI + +A+E +P+ A+ + R +++ + D S ++++
Sbjct: 344 RGLVYRYQNNLEGAIAEYGRAIEADPSYAEAYNNRAYAYAAQRNYEQVIADASQAIRING 403
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY LA G+Y+ A E +AI + +A+ + + L + +A + L
Sbjct: 404 KYAAAYNVRSLARFEKGDYQGALEDGHRAIDSSDGYADAFFNRGRARLRLGDPREATKDL 463
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + +++ AY+ RGL +++ A+KD
Sbjct: 464 DRAIELNEGMVDAYYYRGLARFDREKYEDAVKD 496
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
GE+ RRG R A I +AL EPN+ ++ RG +D+ A+ D
Sbjct: 277 GESLFRRGDQRGA-------IAFYERALSLEPNNVAVIVSRGNALRAMRDYPGALADYER 329
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ ++ AY GL + A + +AI+ D ++ EA+ + Y N E
Sbjct: 330 AIAINSNYAPAYNNRGLVYRYQNNLEGAIAEYGRAIEADPSYAEAYNNRAYAYAAQRNYE 389
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + Q + I+ +++ AY++R L G ++ A++D
Sbjct: 390 QVIADASQAIRINGKYAAAYNVRSLARFEKGDYQGALED 428
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD RG+A+ + KY A+ +D++L DP Y A RG A +++ AI+D+ +
Sbjct: 474 VDAYYYRGLARFDREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLKKMPQAIADWQQ 533
Query: 441 AI 442
AI
Sbjct: 534 AI 535
>gi|225620520|ref|YP_002721777.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215339|gb|ACN84073.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 392
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G A+ FD+ ++ + E R +A ++ + +I D+ +AI+
Sbjct: 82 NRGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVY 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R ++ ALGE EAI+D KA+E+ + D + RG V K +FN A++D
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDD 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + +++E Y A I +YK A E + I+++ + +A+ + +
Sbjct: 202 YTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTME 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A++ +V+ ++ + A++ + + L+ LG + +AI
Sbjct: 262 AYQEAIKDFDKVIELEPNLADAHYNKAVALNHLGIYDEAI 301
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 386 SRGIAQVN---EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+R A+ N E Y SA+ + +K + + A RG E A+ DF + I
Sbjct: 45 NRANAKANIDDEASYKSAVEDYTWTIKLNDQFAAAYYNRGIINRSLGNTEEALKDFDKTI 104
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N + E + R +A+L + +I+D +KA+E P+ AD + R + ++ A
Sbjct: 105 ELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEA 164
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D ++ + AY G +G + +A + + AI ++R F + + +
Sbjct: 165 IKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKF 224
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + A+E +++ I+ +++KAY RG++ + +++AIKD
Sbjct: 225 HIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDF 270
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +++ L R + + Y +I +++ ++ P + +A R ++ E
Sbjct: 102 KTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEY 161
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+ +AI+ N +A+ RG + LG EAI D + A+ AD R
Sbjct: 162 KEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRAN 221
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F KD+ AVED +K++ + AY G+ ++ Y++A + K I+L+ N
Sbjct: 222 AKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLA 281
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A + L ++A+ + + ++ +S++Y RG+
Sbjct: 282 DAHYNKAVALNHLGIYDEAILYYNKAIELNPNYSESYFNRGI 323
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVE---AIQDLSKALEFEPNSADILHERG 490
AI F+E I+ + + EA+ R A+A + + A++D + ++ A + RG
Sbjct: 25 AIEYFSEVIKLDSTIYEAYYNRANAKANIDDEASYKSAVEDYTWTIKLNDQFAAAYYNRG 84
Query: 491 IVN----------------------------------FKFKDFNAAVEDLSACVKLDKEN 516
I+N KD+ ++ED + +++
Sbjct: 85 IINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHF 144
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY L+ +++GEYK+A + + KAI+ + +F++A+ + + L N +A++
Sbjct: 145 ADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTN 204
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++I++ F+ Y R + +K A++D
Sbjct: 205 AIHINREFADGYFNRANAKFHIKDYKGAVEDF 236
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
FK K++ A+E S +KLD AY A ++I + YK A E + I+L+ F
Sbjct: 17 FKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANIDDEASYKSAVEDYTWTIKLNDQF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L N+E+AL+ + + ++ + Y++R L +K +I+D +
Sbjct: 77 AAAYYNRGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GSRTMMPHL 619
+ PH
Sbjct: 137 AIE-VYPHF 144
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
SL N +A++ D + +Y ++++ RA + L+ +K I D +KA+++ P AY
Sbjct: 89 SLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAY 148
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALH 135
+ + +ALG +EA+ ++K E+ H
Sbjct: 149 YNRALSKNALGEYKEAIKDYDKAIEYNSH 177
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 49 LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++ A+ D L+ + NR +E ++ I+D DK ++L+P L A+
Sbjct: 226 IKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLADAHY 285
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
K A + LG +EA+ + K E
Sbjct: 286 NKAVALNHLGIYDEAILYYNKAIE 309
>gi|404403850|ref|ZP_10995434.1| hypothetical protein AJC13_00370 [Alistipes sp. JC136]
Length = 662
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEADFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI+D K + E AD RG+ KD A E+
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G +YK+AE KAI D ++ ++ + Y
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALVYNATNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+AL +V+ +D S Y R +L +G + +A++D
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALED 286
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA---- 501
+ RRG + EA D +KA+ + R +V +NA
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALV------YNATNRP 246
Query: 502 --AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D ++LD N Y + + IG+Y +A E + K N + + +
Sbjct: 247 MQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAG 306
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y L E+A+ + + F+ AY RG L L + A D
Sbjct: 307 VYAQLGEIEQAVADYSAAIKLYPDFANAYIYRGRLREYLNDPQGAKSD 354
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RGI Q +Y ++++ + ++ +P P + R T RA +QR
Sbjct: 487 FERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +A++ P A+ R A G EA +D S
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAYEDYS 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E P A+ + RGI+ KD D+S +L
Sbjct: 607 KAIELNPAFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++ ++ +++ ++ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + A+ L+ + + + AV DL+ VKL + AY L+ G +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601
Query: 537 EEAHLKAIQLDRNFLEAW 554
E + KAI+L+ F EA+
Sbjct: 602 YEDYSKAIELNPAFAEAY 619
>gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424]
gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 512
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 329 SKSSISDNKSSDSTESRSKL----SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
S S+ K+ D R + FKW + +T + N+ F VT ++K++ D
Sbjct: 209 SSLSVEQQKTVDEIAERERTVRINHFKWGIPVQTYLD---NQSFIVTSMAKTQQ--ADKL 263
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ G N+G+Y AI +++ L+ Y EA G G + + AI + +A++
Sbjct: 264 VEEGKQLRNQGQYEEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQKAIESYNKALEF 323
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
EAW G + L EAI+ +KALEF+ + + + G + + + A+E
Sbjct: 324 KSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAIE 383
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + A+ LG +L+ + Y++A +++ KA++ ++ EAW + L
Sbjct: 384 SYNKALEFKSDYHEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLRRL 443
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A++ + L ID ++ RGL L L ++++AIK
Sbjct: 444 ERYDEAIQSYDKALEIDPNNPLYWNSRGLSLQNLKRYEEAIK 485
>gi|150007314|ref|YP_001302057.1| hypothetical protein BDI_0659 [Parabacteroides distasonis ATCC
8503]
gi|149935738|gb|ABR42435.1| putative exported Tpr repeat-family protein [Parabacteroides
distasonis ATCC 8503]
Length = 707
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS I+ D L+ G + Y +I F+Q++K P E R A+ + +
Sbjct: 15 ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L +
Sbjct: 75 GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ KD+N A + + + Y G G+ KA + KAI++D +
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----L 608
A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254
Query: 609 SSGSRTMMPHLIWNLTRWR 627
S SR ++ L R++
Sbjct: 255 SMDSRNLIARFNRGLLRFQ 273
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR---TMMPHLI 620
+ ++ +A+E V+ + AY+ R LL G ++ A++D + T +P +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P + + + RA+ E E + D+ I+ NP A+ R R A + AI D ++
Sbjct: 597 PRSAMLKDNKRAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNE 654
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A+E +P A+ + RG+ D N + DLS +L
Sbjct: 655 AIERDPEFAEAYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|395849729|ref|XP_003797468.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Otolemur
garnettii]
Length = 809
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 174 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 232
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 233 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 292
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 293 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 324
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 370 VTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 186 VNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFH 245
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 246 RGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQ 305
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 306 LRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 185 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 243
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 244 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 303
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 304 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 356
>gi|443313119|ref|ZP_21042732.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
gi|442776927|gb|ELR87207.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
Length = 296
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAIS 402
++LS+K + + RN K + ++++ ++ + ++ RG A+ + G AI+
Sbjct: 34 TQLSYKDYLEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIA 93
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ Q LK +P + +AAI+++T+AI+ NPS A++ RG
Sbjct: 94 DYQQALKINPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQ 153
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ A+ D +A+ +P + + + +GI + KD AA+ + +KL + SAY
Sbjct: 154 GDPQAALADYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNS 213
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYI 580
G A +S+G+ + A + +A+Q++ + + + Y +L N++ AL+ QQ LY
Sbjct: 214 RGNAFASLGDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDFQQAASLYK 273
Query: 581 DKRFSKAYH 589
+ +K Y
Sbjct: 274 QQNRTKDYQ 282
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + Y AI+ Q ++ +P A RG AR + AI+D+ +A++
Sbjct: 42 LEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKI 101
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + L + AI + +KA+E P+ A RG + D AA+
Sbjct: 102 NPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALA 161
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD +N S Y G+ I + + A + +AI+L ++ A+ + L
Sbjct: 162 DYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASL 221
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+S+ AL+ + L I+ + + Y+ RGLL L ++ A+KD +
Sbjct: 222 GDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDFQQAA 269
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E+GI ++ +++ A+ DL+ ++L+ + AY Y G A G+ A + +A++++
Sbjct: 43 EQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKIN 102
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +L ++ L + + A+ + + ++ ++ AY RG L+ G + A+ D
Sbjct: 103 PQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALAD 162
Query: 608 LSSGSR--TMMPHLIWN 622
R P + +N
Sbjct: 163 YKQAIRLDPKNPSVYYN 179
>gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3]
gi|423336937|ref|ZP_17314684.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
CL09T03C24]
gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3]
gi|409239956|gb|EKN32739.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
CL09T03C24]
Length = 707
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS I+ D L+ G + Y +I F+Q++K P E R A+ + +
Sbjct: 15 ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L +
Sbjct: 75 GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ KD+N A + + + Y G G+ KA + KAI++D +
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----L 608
A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254
Query: 609 SSGSRTMMPHLIWNLTRWR 627
S SR ++ L R++
Sbjct: 255 SMDSRNLIARFNRGLLRFQ 273
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR---TMMPHLI 620
+ ++ +A+E V+ + AY+ R LL G ++ A++D + T +P +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|300868980|ref|ZP_07113584.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
gi|300333047|emb|CBN58776.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
Length = 725
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG Q G AI+ +++ ++ P A RG A E AI+ F +A
Sbjct: 7 DAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQA 66
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P +AW RG LG EAI +A++F+PN + + RG FK + F
Sbjct: 67 IKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFEE 126
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + + +++ + G+AL+ G + A + +A+ + +F +AW +
Sbjct: 127 AIACFDEALVIKRDDHKVWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGILL 186
Query: 562 QD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
D L E+AL Q + + A++ RG+ L L + AI
Sbjct: 187 CDQLGQYEEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGAI 231
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ AI+ FDQ +K P +A RG +E AI+ + +AI+
Sbjct: 45 NRGGALKKLGRNEEAIACFDQAIKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFK 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L EAI +AL + + + + RGI F + AA+
Sbjct: 105 PNFHEAWNNRGFALFKLERFEEAIACFDEALVIKRDDHKVWNNRGIALAHFGNLEAALAS 164
Query: 506 LSACVKLDKENKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+ + + A+ G+ L +G+Y++A + +AI+ ++ +AW GHL
Sbjct: 165 FDQALAIKSDFYQAWNNRGILLCDQLGQYEEALASFDQAIKFKPDYHDAWYNRGIALGHL 224
Query: 558 TQFYQDLANSEKAL 571
F + + +KAL
Sbjct: 225 EDFEGAINSFDKAL 238
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQ--ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+RG A ++ AI+ FD+ ++K D + RG A A LEAA++ F +A+
Sbjct: 113 NRGFALFKLERFEEAIACFDEALVIKRDDH--KVWNNRGIALAHFGNLEAALASFDQALA 170
Query: 444 SNPSAGEAWKRRGQARA-ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+AW RG LG+ EA+ +A++F+P+ D + RGI +DF A
Sbjct: 171 IKSDFYQAWNNRGILLCDQLGQYEEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGA 230
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + + Y L+L K+ + H
Sbjct: 231 INSFDKALAIKPD-----YYSSLSLEKTATVKQLQRDH 263
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD RG + ++ D A+ + ++ ++ A+ G AL +G ++A +
Sbjct: 6 ADAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQ 65
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+ +AW + +L E+A+ +Q + F +A++ RG L L + +
Sbjct: 66 AIKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFE 125
Query: 603 KAI 605
+AI
Sbjct: 126 EAI 128
>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 260
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+++ + ++ + P + LI +A + + + AI+D T+A+Q +P+ E++ RR A
Sbjct: 25 AVALTNLVVAQQPTV-QNLINSARIKAEKGDYQGAIADLTQALQLSPNNAESYHRRANAY 83
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L AI D ++A++ P+ + RGI + D+ A+ D + ++L+ + +A
Sbjct: 84 YQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAA 143
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GLA ++G+ + A + +AI+L+ ++ A+ + +L + + A+ Q +
Sbjct: 144 YYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQ 203
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + Y+ RG+ LG KA++D
Sbjct: 204 RNPDNANVYYNRGVAYLNLGDQPKALEDF 232
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G Y AI+ F+Q ++ +P + A RG AR + + AI+D+ +AI+ N
Sbjct: 112 NRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLN 171
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ AI D ++A++ P++A++ + RG+ D A+ED
Sbjct: 172 PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALED 231
Query: 506 LSACVKLDKE--NKSAYTYL 523
L ++ N Y Y+
Sbjct: 232 FRQAATLFQQQGNTEIYQYI 251
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI+ Q L+ P E+ R A + AI+D+ +AIQ NP +A+
Sbjct: 52 KGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYY 111
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + LG+ AI D ++A++ P+ A + RG+ F D A+ D + +KL+
Sbjct: 112 NRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLN 171
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G+A S++G+ + A +AIQ + + + + Y +L + KALE
Sbjct: 172 PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALED 231
Query: 574 LQQ 576
+Q
Sbjct: 232 FRQ 234
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y AI+ ++Q ++ +P +A RG + + + AI+DF +AIQ NP A+ R
Sbjct: 88 NYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNR 147
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G AR LG+ AI D ++A++ P+ A + RG+ D A+ D + ++ + +
Sbjct: 148 GLARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPD 207
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
N + Y G+A ++G+ KA E +A L
Sbjct: 208 NANVYYNRGVAYLNLGDQPKALEDFRQAATL 238
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P ALIG Q + A+++ A Q P+ + + +A G+ AI DL++
Sbjct: 9 PAALIGTAIVWV-QPQFAVALTNLVVAQQ--PTV-QNLINSARIKAEKGDYQGAIADLTQ 64
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL+ PN+A+ H R ++ +++ A+ D + ++L+ ++ AY G+ S +G+Y+
Sbjct: 65 ALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQ 124
Query: 535 KAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A +AIQL+ +F A+ + L +F +L + + A+ Q + ++ ++ AY+ RG
Sbjct: 125 GAIADFNQAIQLNPDFAAAYYNRGLARF--NLGDDQGAIADYNQAIKLNPDYAIAYNNRG 182
Query: 593 LLLHGLGQHKKAIKDLS 609
+ LG + AI D +
Sbjct: 183 VARSNLGDDQGAIADFN 199
>gi|22761790|dbj|BAC11700.1| unnamed protein product [Homo sapiens]
Length = 806
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 359
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 353
>gi|297281853|ref|XP_001107001.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Macaca
mulatta]
Length = 807
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 353
>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
Length = 551
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I ++ LS GI V +G Y AI+ DQ + DP E RG A +++
Sbjct: 86 KAIGINPELSAAYYNNGIILVLKGDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGND 145
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D+ AI+ NP A+ RG A G+ AI D S+A+ +P +A + RG
Sbjct: 146 ERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGD 205
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D + A+ D + + LD +N AY GL S G+ +A + + I LD
Sbjct: 206 AWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDP 265
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + ++A+ + + +D + + AY+ RG G +AI D S
Sbjct: 266 SIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYS 323
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G + AI+ + Q++ DP P +G A + + + AI+DF EAI+ +P
Sbjct: 237 RGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDP 296
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G+ AI D S+ + EP +A L++RG V + ++ A+ DL
Sbjct: 297 KMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADL 356
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFYQD- 563
+ + LD + Y+ +A ++ G++ A + +AI LD NF A+ FY
Sbjct: 357 NRAIGLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGM 416
Query: 564 LANSE----KALECLQQVLY-------IDKRFSKAYHLR 591
LA +E KA Y ID+R HLR
Sbjct: 417 LAKAEPDFAKAAALAPDNAYLAIWLDIIDRRSGGTSHLR 455
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 116/230 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +F +RG+A +G AI+ +D +K +P A RG A + + E AI+D++
Sbjct: 128 NAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIADYS 187
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI +P ++ RG A + G+ A+ D ++ + + +A + RG++ + D
Sbjct: 188 QAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDD 247
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D S + LD + S GLA G+ +A +AI+LD A+
Sbjct: 248 SRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGT 307
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + ++A+ +V+ ++ + A + RG +L+ LG++++A+ DL+
Sbjct: 308 EWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLN 357
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 4/247 (1%)
Query: 371 TRISKSKSISVDFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
T I + K+ + D R +R A + G A + +D+ + +P A G
Sbjct: 47 TAIIEDKAEASDNRAAAYFNRAGALIRRGDNDDAFADYDKAIGINPELSAAYYNNGIILV 106
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + + AI+ +AI +P E + RG A + G AI D A++ P A
Sbjct: 107 LKGDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAY 166
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
H RG+ + D A+ D S + LD +N S+Y G A S G+ +A + + I L
Sbjct: 167 HNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIIL 226
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D A+ + + +A+ QV+ +D + +GL G +AI
Sbjct: 227 DTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIA 286
Query: 607 DLSSGSR 613
D R
Sbjct: 287 DFDEAIR 293
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 26/271 (9%)
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSASLNDSNT-------NSESYSKSSISDNKSSDSTES 344
S++ ++ N D D D ++ D N N+ +Y + + ++ D + +
Sbjct: 191 SLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRA 250
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQ 391
+ S + L T + NK R DF RL RG
Sbjct: 251 IADYS-QVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEW 309
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ +G AI+ + +++ +P AL RG E E A++D AI +P +
Sbjct: 310 LRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQAKI 369
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R ARAA G+ A+ D ++A+ +PN + RG VNF A D +
Sbjct: 370 YSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGMLAKAEPDFAKAAA 429
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
L +N YL + L I + + +HL+
Sbjct: 430 LAPDN----AYLAIWLDII-DRRSGGTSHLR 455
>gi|410218576|gb|JAA06507.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410264778|gb|JAA20355.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 807
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 353
>gi|296531396|ref|NP_001116307.2| tetratricopeptide repeat protein 13 isoform b [Homo sapiens]
Length = 806
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 353
>gi|114573142|ref|XP_001149277.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Pan
troglodytes]
Length = 806
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 182 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 301 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 353
>gi|334118912|ref|ZP_08493000.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333459142|gb|EGK87757.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1004
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A+ +D+ ++ D Y A RG + + A+ + AI+ +
Sbjct: 612 NRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELD 671
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ AW RG L EA+ +A+E + N+ RG V +K K ++ A+
Sbjct: 672 ANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKRYDEALVS 731
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N+SA+ G L + Y +A ++ +AI+LD N+ W L
Sbjct: 732 YDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANYQLVWFLRGLLLDTLK 791
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA---------IKDLSSGSRTMM 616
E+AL + + +D + + LRGLLL L ++++A + DLSS
Sbjct: 792 RYEEALVSYDRAIELDTNYQLVWFLRGLLLDTLKRYEEALVSYDRAIELGDLSSYFFFYR 851
Query: 617 PHLIWNLTRW 626
I L RW
Sbjct: 852 AIAILGLNRW 861
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 8/261 (3%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIF 404
F W + N KR + V S +++ +D RG N +Y A+ +
Sbjct: 540 FYWFLRGNVLNNLKRYDEALV---SYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESY 596
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D+ ++ D Y A RG + + A+ + AI+ + + AW RG L
Sbjct: 597 DRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKR 656
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ +A+E + N RG V + K ++ A+ ++LD N+SA+ G
Sbjct: 657 YDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRG 716
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L + Y +A ++ +AI+LD N AW + L ++AL + + +D +
Sbjct: 717 NVLYKLKRYDEALVSYDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANY 776
Query: 585 SKAYHLRGLLLHGLGQHKKAI 605
+ LRGLLL L ++++A+
Sbjct: 777 QLVWFLRGLLLDTLKRYEEAL 797
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ D+ +K D Y A +G + + A++ AI+ + + W R
Sbjct: 486 RYYEAVECLDKAIKIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLR 545
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +ALE +PN +RG V K ++ A+E ++LD
Sbjct: 546 GNVLNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDAN 605
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L ++ Y +A ++ +AI+LD N+ AW + +L ++AL
Sbjct: 606 YRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYD 665
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +D + A+ RG +L+ L ++ +A+
Sbjct: 666 RAIELDANYRWAWANRGGVLYNLKRYDEAL 695
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 425 RAFQRELEAAIS--DFTEAIQSN----PSAGEA--WKRRGQARAALGESVEAIQDLSKAL 476
+A+ E+E I D+ A++ S GEA W +G + L EA++ L KA+
Sbjct: 439 KAYFDEIENCIEQKDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAI 498
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + N +G V K ++ A+ L ++LD NK + G L+++ Y +A
Sbjct: 499 KIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLRGNVLNNLKRYDEA 558
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ +A++LD N+ AW +L +KALE + + +D + A+ RG +L+
Sbjct: 559 LVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDANYRWAWANRGGVLY 618
Query: 597 GLGQHKKAI 605
L ++ +A+
Sbjct: 619 NLKRYDEAL 627
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%)
Query: 50 RNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
+++ A+ + L+A E +D + +C S+LE + + DKA+++D ++A+ K
Sbjct: 452 KDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAIKIDSNYVRAWAHK 511
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G +L R +EAL+ ++ E
Sbjct: 512 GNVLDSLKRYDEALAFLDRAIE 533
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + AVE L +K+D A+ + G L S+ Y +A +AI+LD N W
Sbjct: 483 RLERYYEAVECLDKAIKIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYW 542
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L ++AL + L +D + A+ RG +L L ++ KA++
Sbjct: 543 FLRGNVLNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALE 594
>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 335
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI D L+ +P +A + RG A + E AI D A++ NP++ + G
Sbjct: 53 YKNAIKDLDYALQINPKLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLG 112
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A A GE +A++ +KAL F P + H RG + A++D + ++L
Sbjct: 113 LAIAQSGEYEDALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNY 172
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +GE++ A E + A+++D + A+ + Y L A++ Q
Sbjct: 173 TKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQ 232
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +D + KAY RGL + G +A KD
Sbjct: 233 AIQLDPTYIKAYLNRGLARYKSGNQTEANKDF 264
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ + +G Y A+ +Q+L +P + A R ++ + AI D A+Q NP
Sbjct: 9 QGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLKDYKNAIKDLDYALQINP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A LG+ +AI+DL AL+F P S I + G+ + ++ A++
Sbjct: 69 KLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + +N Y G + G + A + K I+L N+ +A+ + + L
Sbjct: 129 NKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGE 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+E L ID AY+ RG + + L + + AI D +
Sbjct: 189 HQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFN 231
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A + GKY AI LK +P G A A E E A+ + +A
Sbjct: 72 DAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKA 131
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP + + RG++ G +AIQD +K +E PN RG+ + + + A
Sbjct: 132 LLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQA 191
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ED + +K+D N AY G S+ E + A + +AIQLD +++A+
Sbjct: 192 AIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G +A Q A+ D + + NP+ A+ R L + AI+DL AL+
Sbjct: 6 LYQQGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLKDYKNAIKDLDYALQ 65
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P +D RG + A++DL +K + + + Y LGLA++ GEY+ A
Sbjct: 66 INPKLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDAL 125
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ + KA+ + + + + + + + A++ + + + ++KAY RGL H
Sbjct: 126 KYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQ 185
Query: 598 LGQHKKAIKDLSSG 611
LG+H+ AI+D ++
Sbjct: 186 LGEHQAAIEDYNTA 199
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G+Y A+ +++ L +P + RG + + AI DF + I+ +P+
Sbjct: 112 GLAIAQSGEYEDALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG LGE AI+D + AL+ + + + RG V + K+ +A++D +
Sbjct: 172 YTKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFN 231
Query: 508 ACVKLDKENKSAYTYLGLA 526
++LD AY GLA
Sbjct: 232 QAIQLDPTYIKAYLNRGLA 250
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+ AI F++ ++ P Y +A I RG E +AAI D+ A++ +
Sbjct: 144 NRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKID 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG +L E AI D ++A++ +P RG+ +K + A +D
Sbjct: 204 AYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKSGNQTEANKD 263
Query: 506 LS--ACVKLDKENKSAYTY 522
CV D AY Y
Sbjct: 264 FYHVMCVNAD-----AYVY 277
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 366 KKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +K+ +S ++ ++RG+ G++ +AI ++ LK D A RG
Sbjct: 155 KQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRG 214
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+E+ +AI DF +AIQ +P+ +A+ RG AR G EA +D +
Sbjct: 215 CVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKSGNQTEANKDFYHVM 268
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA Y L+ +K+ I+D D ALQ++P L AY+ +G A+ LG+ E+A+
Sbjct: 42 NRALLYYHLKDYKNAIKDLDYALQINPKLSDAYLNRGNAWRHLGKYEKAI 91
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ +++ A++I +Y + NR Y L+ + I D ++A+QLDPT ++AY
Sbjct: 191 AAIEDYNTALKI------DAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELE 147
+ +G A G + EA K + H + +AD + + +
Sbjct: 245 LNRGLARYKSGNQTEA----NKDFYHVMCVNADAYVYYQAQ 281
>gi|73952536|ref|XP_857193.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 3 [Canis
lupus familiaris]
Length = 805
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 181 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 240
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 241 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 300
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 301 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 358
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 181 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 239
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 240 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 299
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 300 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 352
>gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142]
gi|354555489|ref|ZP_08974790.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142]
gi|353552548|gb|EHC21943.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 252
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y +A+ F+Q+L ++P A RG A + + E A++DFT+ ++
Sbjct: 67 VQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKL 126
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG LGE +AI D KAL+ PN A + G+ + A
Sbjct: 127 DPQMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDAFAQNNLGLAHLNSGSPELAKI 186
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D + V +D AY GLAL +GE KKA
Sbjct: 187 DFTQAVTIDPLYGEAYYNRGLALLDLGETKKA 218
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
+S+I I +L D + ++ +G ++ Q EAA+ DF + + NP A+ RG
Sbjct: 49 SSSIPIESSLLTVDTV---EMVQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINAYFNRGF 105
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A ++LG+ +A+ D +K L+ +P RG V + + A+ D +K++ +
Sbjct: 106 AYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDA 165
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A LGLA HL +LA + Q
Sbjct: 166 FAQNNLGLA-----------------------------HLNSGSPELAKID-----FTQA 191
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ ID + +AY+ RGL L LG+ KKAI D + IW
Sbjct: 192 VTIDPLYGEAYYNRGLALLDLGETKKAIADFQKAAE------IW 229
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 NWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A+ + +LAQ+ +I NR F YS L + + D K L+LDP ++QAY+ +
Sbjct: 78 NYEAAVDDFNQVLAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNR 137
Query: 110 GCAFSALGRKEEALSVWEKG 129
G + LG E+A+S +EK
Sbjct: 138 GNVYLQLGEDEKAISDYEKA 157
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ +RG A + G++ A++ F ++LK DP +A + RG E E AISD+ +
Sbjct: 97 INAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEK 156
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ NP+ A G A G A D ++A+ +P + + RG+ +
Sbjct: 157 ALKINPNDAFAQNNLGLAHLNSGSPELAKIDFTQAVTIDPLYGEAYYNRGLALLDLGETK 216
Query: 501 AAVEDLSACVKL 512
A+ D ++
Sbjct: 217 KAIADFQKAAEI 228
>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
Length = 608
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G++ AI+ +D+ L DP A RG A E A+ + +A++ NP
Sbjct: 325 RGLALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINP 384
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW G A +LG EAI K+L ++G + A
Sbjct: 385 DHHEAWHNLGGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASY 444
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ N A+T L L+ + EY+KA + KA+ ++ N W +L DL +
Sbjct: 445 EKALEVNPSNDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGS 504
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EKA++C + L+I+ +A++ G L L ++ +A+K
Sbjct: 505 HEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVK 544
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ ++ +F+Q+++ P RG A A E AI+ + + + +PS AW
Sbjct: 299 GEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLAVDPSDDSAWYS 358
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG EA+Q KALE P+ + H G + A+ + +
Sbjct: 359 RGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAIVCYDKSLVANS 418
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E ++ G AL ++G Y++A ++ KA++++ + AW L DL +KAL
Sbjct: 419 EQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPSNDLAWTALAGILADLREYQKALTFY 478
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ L I+ ++ G L LG H+KA++
Sbjct: 479 EKALSINSNNGLTWYNLGNTLIDLGSHEKAVQ 510
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ G G+ ++ +++Q+++ P A GRG A A E AI+ F +A++
Sbjct: 168 LTEGNHLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEI 227
Query: 445 NPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNS-----------------ADI 485
NP + W RG L + +AI +AL PN AD
Sbjct: 228 NPEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKREDLLNQLNQLADN 287
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L ++ + + + ++E + V++ +N + GLAL+S+G +++A ++ K +
Sbjct: 288 LFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLA 347
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D + AW +L E+A++ Q+ L I+ +A+H G L LG++++AI
Sbjct: 348 VDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAI 407
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G+Y AI +D+ L + + + +G+A E A + + +A++ NPS
Sbjct: 394 GGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPS 453
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW A L E +A+ KAL N+ + G AV+
Sbjct: 454 NDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGSHEKAVQCYE 513
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ +++ A+ LG AL+ + Y +A +++ KA+ + + EAW + D
Sbjct: 514 NALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRY 573
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E+A+ + L I+ A H R + L LG+++
Sbjct: 574 EEAIASFDKALAINPHNEAARHNRSVALRNLGRYE 608
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILK--EDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
L R Q G AI+ DQ +K +D + + Q L+ A+S F +A+
Sbjct: 13 LKRAEKQSELGNIDEAIAACDQAIKKSDDNLAYSPWCKKAYLLIQQERLDEALSCFQKAL 72
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
N W + + L EAI+ +A++ +PNS + E+G + + A
Sbjct: 73 NINSRFDPIWHDQAKILVQLNRIDEAIKSYDQAIKIKPNSDSLWIEKGDLLVQQNQTRLA 132
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++++ N L L+ + E L N L HL +
Sbjct: 133 ADSYQRALEINPNNHQVSQKLEGLLNQLQE-------------LAENLLTEGNHLYE--- 176
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E++LE QV+ + A++ RG+ L LG++++AI
Sbjct: 177 -AGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAI 218
>gi|427739179|ref|YP_007058723.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
gi|427374220|gb|AFY58176.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
Length = 1024
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + +G A++ F++ + +P + L R R+ ++ + AI+D+TEA++ N
Sbjct: 713 TRGNLRSQQGDLKGALADFNEAVLFEPEKVDYLKKRADIRSQLKDYKGAIADYTEAVRLN 772
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A K+ R + AI DL+K + P + D + RG+V F KD+ A+ D
Sbjct: 773 PKDSDAIKKLLVIRIEQKDFNGAITDLNKFISLNPKNIDAIKARGVVRFAQKDYENALAD 832
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH-----------LKAIQLDRNFLEAW 554
+ ++L ++ +Y Y G L+ + Y+ A E + + I ++ N
Sbjct: 833 FNEVIRLKPDDSDSYYYRGQTLTQLNNYQAAVENYNQILHTEKFDGVIGINVEINSKTKV 892
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL--LLHGLGQHKKAIKDLSSGS 612
+TQ + + ++ ++ Q+L +D + +K L+ + LL G K +++ SG+
Sbjct: 893 ATVTQVKDNYSAQKQGIKVGDQILVVDGKSTKNMSLKQVVDLLRGKAGTKLSVRVARSGN 952
Query: 613 RTMMPHLIWNLTR 625
L +NLTR
Sbjct: 953 N----KLDFNLTR 961
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI AIQ+ P +AW RG G ++++D KA+ EP RG
Sbjct: 557 AIKAVDRAIQNKPDFYQAWYLRGLMN---GLDKKSLKDFEKAISIEPKFTPAWRIRGFTL 613
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F + A+ VK+D ++ SA T+ L L S G + +A + A RN +A
Sbjct: 614 FHLDQYPEALSSFEQLVKIDSKDVSANTFRSLILLSQGNFTEALDIANLAFANSRN-PDA 672
Query: 554 WGHLTQFYQDLAN--SEKALECLQQVLYIDKRFSKA--YHLRGLLLHGLGQHKKAIKDLS 609
W +L + + +AN S++A+ L + + ++ F K Y RG L G K A+ D +
Sbjct: 673 WMYLVRAFALVANGDSKRAMANLDEAVRLNPEFMKGYVYSTRGNLRSQQGDLKGALADFN 732
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 434 AISDFTEAIQSNPS--AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+++ EA++ NP G + RG R+ G+ A+ D ++A+ FEP D L +R
Sbjct: 691 AMANLDEAVRLNPEFMKGYVYSTRGNLRSQQGDLKGALADFNEAVLFEPEKVDYLKKRAD 750
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + KD+ A+ D + V+L+ ++ A L + ++ A K I L+ +
Sbjct: 751 IRSQLKDYKGAIADYTEAVRLNPKDSDAIKKLLVIRIEQKDFNGAITDLNKFISLNPKNI 810
Query: 552 EAWG--HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A + +F Q + E AL +V+ + S +Y+ RG L L ++ A+++
Sbjct: 811 DAIKARGVVRFAQK--DYENALADFNEVIRLKPDDSDSYYYRGQTLTQLNNYQAAVEN 866
>gi|386810943|ref|ZP_10098169.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405667|dbj|GAB61050.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 560
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ + L+R I Q +G +A+ ++ ++ A RG +E AI D+
Sbjct: 236 VIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEKTGNVEHAIYDY 295
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++I NP A+ RG A++ + +AI D S A+ +PNS + RGI
Sbjct: 296 NKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSILSYYNRGIAFKMVGR 355
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ ++EDLS + LD AY + GLA + GE +KA KA+++D N E +
Sbjct: 356 VDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRG 415
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ DL + + A++ L + + AY++R G G+ +K++ D
Sbjct: 416 ILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMAD 464
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 395 GKYASAISI----FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
GK S +SI + + L D + + R + Q +E A+ D AI+ + +
Sbjct: 214 GKRISQMSIKKGYYLKNLTMDEVIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAV 273
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG G AI D +K+++ P+ A + RG + + A+ D S V
Sbjct: 274 AYCNRGVIYEKTGNVEHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAV 333
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
LD + +Y G+A +G + E K I LD F A+ H Y + SEKA
Sbjct: 334 SLDPNSILSYYNRGIAFKMVGRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKA 393
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + L ID ++ Y RG+L L AIKDL++
Sbjct: 394 MADFNKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTT 433
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 34/258 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G AI +++ + +P Y A RG+ A +LE AI D++ A+ +
Sbjct: 277 NRGVIYEKTGNVEHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLD 336
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSK------------------------------- 474
P++ ++ RG A +G +I+DLSK
Sbjct: 337 PNSILSYYNRGIAFKMVGRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMAD 396
Query: 475 ---ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
ALE +PN A+ +RGI++ + F+ A++DL+ ++ N AY A G
Sbjct: 397 FNKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKG 456
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
E +K+ + + I+L+ + Q L S +AL L + AY R
Sbjct: 457 EIEKSMADYDRVIELNPRMAGVYYERGQIKNQLEKSREALMDFSTSLELFPYNPLAYLHR 516
Query: 592 GLLLHGLGQHKKAIKDLS 609
G LG+ K A++D S
Sbjct: 517 GNTFKKLGEMKNALRDYS 534
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK IS+D + RG+A G+ A++ F++ L+ DP + E + RG A +
Sbjct: 364 SKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRGILHADLQH 423
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D T IQ P+ A+ R +A GE +++ D + +E P A + +ERG
Sbjct: 424 FDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMADYDRVIELNPRMAGVYYERG 483
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + + A+ D S ++L N AY + G +GE K A + ++L+ N
Sbjct: 484 QIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKKLGEMKNALRDYSVYLKLNPN 542
>gi|410099837|ref|ZP_11294805.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
CL02T12C30]
gi|409217670|gb|EKN10645.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
CL02T12C30]
Length = 701
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F ++ S I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 2 FVAYSLAMSAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKAKPWIAEPYFYRAVAKIN 61
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 62 LDDYKGAEEDCTLCLQRNPFLVQAYYARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLV 121
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ + N + KD++ A + +K + Y G + G+ KA + KAI++D
Sbjct: 122 NKAVANIQRKDYDDAEKTFDVLMKAHPKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMD 181
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++G+ + + AL L + + ++ R S Y RGL+ + + + A+ D
Sbjct: 182 PYYAPSYGNRAILLYQTNDLKGALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDD 241
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 111/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KYA AI+ +D+ L+ P + L+ + A +++ + A F ++++
Sbjct: 88 ARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLVNKAVANIQRKDYDDAEKTFDVLMKAH 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++V+A+ D +KA+E +P A R I+ ++ D A+ D
Sbjct: 148 PKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMDPYYAPSYGNRAILLYQTNDLKGALAD 207
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + + I +D+N L A + +
Sbjct: 208 LNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDDYDQVIGMDKNNLIARFNRGLLRYQVG 267
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ +A+E V+ + AY+ R LL G ++ +++D
Sbjct: 268 DNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGSVQDF 310
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D +++ +P + A RG R QR+ AAI D+ EAI+ +P EA+ RG A +LG
Sbjct: 612 YDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQDYDEAIKRDPDFAEAYFNRGLAHLSLG 671
Query: 464 ESVEAIQDLSKALEF 478
++ + I DLSKA E
Sbjct: 672 DANQGIADLSKAGEL 686
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++ +A + Y A FD ++K P Y + RG + + A++D+ +AI+
Sbjct: 121 VNKAVANIQRKDYDDAEKTFDVLMKAHPKYSMNYLTRGAMYTEKGDTVKALADYNKAIEM 180
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P ++ R + A+ DL++A+ + RG+V ++ D A++
Sbjct: 181 DPYYAPSYGNRAILLYQTNDLKGALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMD 240
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +DK N A GL +G+ +A E IQ
Sbjct: 241 DYDQVIGMDKNNLIARFNRGLLRYQVGDNNRAIEDFDVVIQ 281
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+I+D++ I++ P +AW R + + EAI+D +K +E +P R +V
Sbjct: 490 ASINDYSAKIEAQPGNADAWFGRAVDYMLVQDFTEAIKDFNKVIELDPTYTMAYFNRAVV 549
Query: 493 NFKFKDFN----AAVEDLSACV-----KLDKENKSAYTYLGLALSSIGEYKKAEEAHL-- 541
+K ++ +DLSA + K+ + + + + +KA E L
Sbjct: 550 RYKQLVYDMSQTTTTDDLSASMGSMNFKMGQSPTQPKAPSDPRSAEVKDKRKAYEHELIT 609
Query: 542 ----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
I+L+ F+ A+ G+L +D A++ + + D F++AY RGL
Sbjct: 610 RDYDMVIRLNPGFVYAYFNRGNLRCVQRDF---RAAIQDYDEAIKRDPDFAEAYFNRGLA 666
Query: 595 LHGLGQHKKAIKDLS 609
LG + I DLS
Sbjct: 667 HLSLGDANQGIADLS 681
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P P + + +A++ EL D+ I+ NP A+ RG R + AIQD
Sbjct: 588 PSDPRSAEVKDKRKAYEHEL--ITRDYDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQD 645
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+A++ +P+ A+ RG+ + D N + DLS +L
Sbjct: 646 YDEAIKRDPDFAEAYFNRGLAHLSLGDANQGIADLSKAGEL 686
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 52/135 (38%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A+ +DQ++ D A RG R + AI DF I
Sbjct: 221 YYINRGLVRYQMNDLRGAMDDYDQVIGMDKNNLIARFNRGLLRYQVGDNNRAIEDFDVVI 280
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ ++QD L PN + R K D A
Sbjct: 281 QQEPDNYMAYYNRALLRFETGDYRGSVQDFDVVLGQYPNFTPGYYSRSEAKRKMNDQVGA 340
Query: 503 VEDLSACVKLDKENK 517
D ++++ +K
Sbjct: 341 DRDYWTAIEMENNSK 355
>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 424
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 2/235 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G Y AI+ + + ++ D Y E R + EAAI+D+ + I+ P+
Sbjct: 41 GITKQALGFYEEAINYYSKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EAI+D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLAN 566
++LD AY +G A SIG Y++A + K I++ + N A+ + L
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGL 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+A+ + + L I ++ AY+ RG + L +K+AI+D + P +
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIE-LSPQYFY 274
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V IS S S S + +RG ++ G Y AI ++ L+ Y +A RGTA+
Sbjct: 196 VIEISNSNS-SYAYN-NRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNLE 253
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI DF +AI+ +P A+ RG +++ALG +AI+D + A+ EP D + R
Sbjct: 254 LYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNR 313
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ N A++D ++LD + +AY L+ ++ +Y++A + + K I+L+
Sbjct: 314 AVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPK 373
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
EA+ + + E+AL+ + + ID + KA
Sbjct: 374 SAEAYNNRGFAKYSIGLYEEALKDYDKAIEIDSNYEKA 411
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G A+ + G Y AIS ++++++ + A RG + AI D +A++
Sbjct: 177 GDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYD 236
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A+ L EAI+D KA+E P + RG + A+ED
Sbjct: 237 EYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDF 296
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + AY +A +++G + +A + + I+LD N + A+ + Y +L++
Sbjct: 297 NIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSD 356
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A++ +V+ ++ + ++AY+ RG + +G +++A+KD
Sbjct: 357 YEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKD 397
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I +D +R + N G Y +AI+ +D++++ P + +A RG A+
Sbjct: 58 SKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGY 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE----------- 479
E AI D +AI + + +A+ R + + +EAI+D K LE +
Sbjct: 118 YEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIG 177
Query: 480 ------------------------PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
NS+ + RG +N A+ D++ +++ E
Sbjct: 178 DAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDE 237
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G A ++ YK+A E KAI+L + A+ + L E A+E
Sbjct: 238 YTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFN 297
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ I+ ++ AY+ R + + +G H +AIKD
Sbjct: 298 IAINIEPKYIDAYYNRAVAKNNMGLHNEAIKD 329
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E A + F +A++ + + E + G + ALG EAI SK +E + N A++ +
Sbjct: 13 ETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDENYAELYY 72
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + AA+ D ++L + AY G A ++G Y++A + KAI LD
Sbjct: 73 NRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLD 132
Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N ++A+ + + + L + + +A+E ++VL +D AY+ G +G +++AI
Sbjct: 133 SNNIDAY--IDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAI 190
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E G+ F+ F A ++ D+ N Y YLG+ ++G Y++A + K I++D
Sbjct: 5 EEGLQLFRETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEID 64
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ E + + +L E A+ +V+ + SKAY RG LG +++AIKD
Sbjct: 65 ENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKD 124
Query: 608 L 608
+
Sbjct: 125 I 125
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +SK I I D A+ Y NRA C S L L++ I D DK ++L PT +AY
Sbjct: 53 AINYYSKGIEI-DENYAELY-----YNRANCESNLGLYEAAINDYDKVIELVPTHSKAYD 106
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ +K
Sbjct: 107 DRGYAKGNLGYYEEAIKDIDKA 128
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NR LEL+K I D DKA++L P AY +G + SALG E+A+
Sbjct: 244 NRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAI 293
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
I NRA Y L ++ I++ DK ++L+P +AY +G A ++G EEAL ++K
Sbjct: 341 INAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDK 400
Query: 129 GYE 131
E
Sbjct: 401 AIE 403
>gi|401425919|ref|XP_003877444.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493689|emb|CBZ28979.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 847
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 17/270 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISK--------SKSISVDFR-----LSRGIAQVNEGKYASAI 401
L T +A N+ FC R+ + ++ +D R + GI+ ++G A A+
Sbjct: 438 LSPTHFKALFNRAFCEDRLKNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGSPARAL 497
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
F + ++ D +P+ RG + Q AAI+D+T AI +P ++ R +
Sbjct: 498 QAFTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSK 557
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ + AL+ ++A+ H RG K AAVED ++ ++L+ + A
Sbjct: 558 LGRYEEAVAGYAAALQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALN 617
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQF-YQDLANSEKALECLQQVLY 579
GL + +Y KA +AI+LD RN AW H + Y+++ E A+ +
Sbjct: 618 ARGLVYDQLQQYDKALADFTEAIRLDQRN--PAWLHNRGYTYRNMGELELAIADYSASIK 675
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AY R LG+++ AI+D +
Sbjct: 676 LAPHSHTAYTNRAFAFRKLGRYEAAIEDYT 705
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 4/281 (1%)
Query: 353 DMLK-ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
DML+ ET +++ ++ T + ++ + RG+ G+ +A+ ++ + L+
Sbjct: 380 DMLEAETWQQSEGSRAATRTATAGQPLLNEHYFYQRGLEHRRRGELEAAVHMYTKALELS 439
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P + +AL R + AI D+T A+ +P G + G A+Q
Sbjct: 440 PTHFKALFNRAFCEDRLKNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGSPARALQA 499
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A+E + D H RG K + AA+ D + + LD ++ ++ S +G
Sbjct: 500 FTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLG 559
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y++A + A+Q+ + A+ + L E A+E L ++ + + A + R
Sbjct: 560 RYEEAVAGYAAALQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNAR 619
Query: 592 GLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR---WRNL 629
GL+ L Q+ KA+ D + R + W R +RN+
Sbjct: 620 GLVYDQLQQYDKALADFTEAIRLDQRNPAWLHNRGYTYRNM 660
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 110/274 (40%), Gaps = 49/274 (17%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIG---- 420
DF +RG Q +G YA+AI+ + + DP Y EA+ G
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVAGYAAA 571
Query: 421 -------------RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
RG A A LEAA+ DF A++ NP A RG L + +
Sbjct: 572 LQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNARGLVYDQLQQYDK 631
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ D ++A+ + + LH RG + A+ D SA +KL + +AYT A
Sbjct: 632 ALADFTEAIRLDQRNPAWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691
Query: 528 SSIGEYKKAEEAHLKAI--------QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+G Y+ A E + K + ++ N + L+ F E A+ +VL
Sbjct: 692 RKLGRYEAAIEDYTKVLCEHPGVQTKVLNNRAYCFARLSLF-------EDAIRDYTEVLA 744
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
D + A + RG+ G++ A+ D + R
Sbjct: 745 TDPVNAHALYNRGISFEKCGKYNAAVDDFTRAIR 778
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 1/222 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + L DP P G + + A+ FT AI+ + + + RG
Sbjct: 459 YTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGSPARALQAFTRAIELDDRHPDFFHNRG 518
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ G AI D + A+ +P + R K + AV +A +++ +N
Sbjct: 519 FTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVAGYAAALQIVSDN 578
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+AY G AL+ +G + A E A++L+ A Y L +KAL +
Sbjct: 579 ANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNARGLVYDQLQQYDKALADFTE 638
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ +D+R H RG +G+ + AI D S+ S + PH
Sbjct: 639 AIRLDQRNPAWLHNRGYTYRNMGELELAIADYSA-SIKLAPH 679
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T+ +
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTKVLC 709
Query: 444 SNPSA-GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P + R A L +AI+D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVQTKVLNNRAYCFARLSLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEAPSTANSYYSRGTSRLQLHQVPQATEDLKQALKLD 817
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE-DPM------------YPEALIGRGTARAFQRE 430
RL R A V YASA + D L+E DP EAL RG RA +
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWLQETDPTAHGINAGAAADRLTEALFYRGVCRARLSQ 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 109 VKDAVADFTEVLQRKPGHRRAHYERAACHARLDDFFNAIADYEAALQLD 157
>gi|124023494|ref|YP_001017801.1| hypothetical protein P9303_17941 [Prochlorococcus marinus str. MIT
9303]
gi|123963780|gb|ABM78536.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
Length = 404
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 32/256 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y SA++ +++ + + + I RG + +E AI D+T+AI+ +
Sbjct: 62 NRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELD 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L ++ AI D +KAL P A + R I D A+ D
Sbjct: 122 PQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISD 181
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------------- 546
+ ++ SAY G + +G + A H KA+ +
Sbjct: 182 YTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLVE 241
Query: 547 -----------DRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
DR+ L+A+ + +Q Q N++ A++C + + ++ +++AY+ RGL
Sbjct: 242 NKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGL 301
Query: 594 LLHGLGQHKKAIKDLS 609
+ L ++ A+ D +
Sbjct: 302 ANYNLCDYQAALDDYN 317
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 15/239 (6%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RGIA+VN AI + + L +P + ++ R ++ +
Sbjct: 115 TKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNIND 174
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ AISD+T+AI++ P A+ RG LG A+ D KAL +P ++ERG
Sbjct: 175 IKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERG 234
Query: 491 IVNFKFKDF--NAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQL 546
+ K+ N V DL+ + D+ A+ Y G A G + A + + KAI++
Sbjct: 235 ----ENKNLVENKIVNDLNN--EEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEV 288
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ EA+ + +L + + AL+ + + I+ + AY GL L ++ AI
Sbjct: 289 NPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINSIYEDAYIGCGLAKSALSDYQGAI 347
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 94/186 (50%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R ++ + AI +++AI+ NP+ A+ RG + LG+ A+ D +KA++
Sbjct: 30 GEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAIDINSL 89
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A RG+V + A++D + ++LD ++ +AY G+A ++ + K A +
Sbjct: 90 DASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYT 149
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA+ ++ +++ + ++ + + A+ + + F+ AY+ RG L+ LG+
Sbjct: 150 KALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRR 209
Query: 602 KKAIKD 607
+ A+ D
Sbjct: 210 QAAVTD 215
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + + ++ +P A RG + + ++A++D+ +AI N + RG
Sbjct: 39 YQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AI D +KA+E +P A + RGI D A+ D + + ++ +
Sbjct: 99 VVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRH 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+Y ++ ++I + K A + KAI+ F A+ + + L + A+ ++
Sbjct: 159 AKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEK 218
Query: 577 VLYIDKRFSKAYHLRG 592
L I + A + RG
Sbjct: 219 ALVIKPQLLTAMNERG 234
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+++V+ R +R I++ N AIS + + ++ P++ A RG
Sbjct: 149 TKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGR 208
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ--------------------------------A 458
+AA++D +A+ P A RG+ A
Sbjct: 209 RQAAVTDHEKALVIKPQLLTAMNERGENKNLVENKIVNDLNNEEDRSQLDAFNYYSQGNA 268
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
G + AI +KA+E P+ A+ + RG+ N+ D+ AA++D + ++++ +
Sbjct: 269 EQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINSIYED 328
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AY GLA S++ +Y+ A A+ + + ++ + A+
Sbjct: 329 AYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAY 364
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ + G+ R L + AI SKA+E PN+A + RG V + D+ +A+ D + +
Sbjct: 26 YFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAID 85
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ------DLA 565
++ + S Y G+ + A + + KAI+LD H T +Y +L+
Sbjct: 86 INSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQ------HATAYYNRGIAKVNLS 139
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
+++ A+ + L ++ R +K+Y+ R + + + K AI D + M
Sbjct: 140 DNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAM 189
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A+ G SAI + + ++ +P Y EA RG A + +AA+ D+ +AI+ N
Sbjct: 264 SQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEIN 323
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+A+ G A++AL + AI + L P + RGI
Sbjct: 324 SIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIA 370
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+ EA+ + S +A+ + G F KD+ A++ S ++++ N AY
Sbjct: 4 ETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNR 63
Query: 524 GLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G +G+Y+ A + KAI LD +F G + + ++ E A++ + + +
Sbjct: 64 GNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNI---EGAIDDYTKAIEL 120
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
D + + AY+ RG+ L +K AI D +
Sbjct: 121 DPQHATAYYNRGIAKVNLSDNKGAIFDYT 149
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A + ++AI +T+AI+ NP EA+ RG A L + A+ D +KA+E
Sbjct: 265 QGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINS 324
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
D G+ D+ A+ + ++ +N +AY G+A
Sbjct: 325 IYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIA 370
>gi|218781266|ref|YP_002432584.1| hypothetical protein Dalk_3428 [Desulfatibacillum alkenivorans
AK-01]
gi|218762650|gb|ACL05116.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 271
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A+ FD+ + P I RG A ++E AI D+ +AI +
Sbjct: 103 NRGTLYWVLGRYDEALQDFDKAVDMQPDSALNYINRGNVYADMGDVERAIEDYNQAITLD 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA-DILHERGIVNFKFKDFNAAVE 504
P+ G A+ RG A ++L +AI DL KA+ F L +RG++ + KD+N AVE
Sbjct: 163 PNNGLAYSNRGLAWSSLKRFDQAIPDLDKAIAFGHEGVYKSLMKRGVIRYGTKDYNGAVE 222
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
D S +K+ AY + GLA + E +KA+ A+ L +
Sbjct: 223 DFSRVIKMHPGFTEAYYFRGLAYQQLNEAEKAQTDLQTAMDLQK 266
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTA 424
C + +K I R I ++G++ +AI + + L+ + PE AL RGT
Sbjct: 48 CASGPAKDGPIPGASYFDRAIFSESKGRHLAAIEQYTRYLEMNQNSPEYAAPALNNRGTL 107
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ A+ DF +A+ P + + RG A +G+ AI+D ++A+ +PN+
Sbjct: 108 YWVLGRYDEALQDFDKAVDMQPDSALNYINRGNVYADMGDVERAIEDYNQAITLDPNNGL 167
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHL 541
RG+ K F+ A+ DL + E Y L G+ +Y A E
Sbjct: 168 AYSNRGLAWSSLKRFDQAIPDLDKAIAFGHE--GVYKSLMKRGVIRYGTKDYNGAVEDFS 225
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ I++ F EA+ YQ L +EKA LQ + + K K
Sbjct: 226 RVIKMHPGFTEAYYFRGLAYQQLNEAEKAQTDLQTAMDLQKALEK 270
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 433 AAISDFTEAIQSNPSAGE----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AAI +T ++ N ++ E A RG LG EA+QD KA++ +P+SA
Sbjct: 78 AAIEQYTRYLEMNQNSPEYAAPALNNRGTLYWVLGRYDEALQDFDKAVDMQPDSALNYIN 137
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG V D A+ED + + LD N AY+ GLA SS+ + +A KAI
Sbjct: 138 RGNVYADMGDVERAIEDYNQAITLDPNNGLAYSNRGLAWSSLKRFDQAIPDLDKAI---- 193
Query: 549 NFLEAWGHLTQFYQDLA----------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
A+GH Y+ L + A+E +V+ + F++AY+ RGL L
Sbjct: 194 ----AFGH-EGVYKSLMKRGVIRYGTKDYNGAVEDFSRVIKMHPGFTEAYYFRGLAYQQL 248
Query: 599 GQHKKAIKDLSS 610
+ +KA DL +
Sbjct: 249 NEAEKAQTDLQT 260
>gi|428212897|ref|YP_007086041.1| hypothetical protein Oscil6304_2502 [Oscillatoria acuminata PCC 6304]
gi|428001278|gb|AFY82121.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 1150
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G +A AIS + + L+ + RG AR Q + AI D+TE+I
Sbjct: 932 NRGLAKFQIGDFAGAISDYTRSLELNDNEAVVYFNRGFARFNQGDYTGAIGDYTESILKA 991
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG+A LG +A +D S+A++ P A + RG+ + D+ A+ D
Sbjct: 992 PEQTGAYFYRGEAYGRLGNYQQAAEDYSRAIQLNPQDAVAYNNRGLARYNQADYPGAIAD 1051
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L ++ AY G+A S+ +Y A E +A+ L+ + A+ + + ++
Sbjct: 1052 YTEALRLKPDDAVAYLNRGVARSAGTDYHGAIEDFTQALSLNEKYASAYNYRGRARAEMG 1111
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + A+ LQ + R H H++AI L++
Sbjct: 1112 DRQGAIGDLQTAANLFSRQGDTIH-----------HQQAIAALTA 1145
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P A RG R + E A+ D+T A+Q + + A+ RG A+ +G+ AI
Sbjct: 889 NPANASAYYNRGFERLDIGDYEGAVDDYTRALQIDGNQPTAYNNRGLAKFQIGDFAGAIS 948
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D +++LE N A + RG F D+ A+ D + + E AY Y G A +
Sbjct: 949 DYTRSLELNDNEAVVYFNRGFARFNQGDYTGAIGDYTESILKAPEQTGAYFYRGEAYGRL 1008
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAW--------------GHLTQFYQDL------------ 564
G Y++A E + +AIQL+ A+ G + + + L
Sbjct: 1009 GNYQQAAEDYSRAIQLNPQDAVAYNNRGLARYNQADYPGAIADYTEALRLKPDDAVAYLN 1068
Query: 565 --------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ A+E Q L ++++++ AY+ RG +G + AI DL + +
Sbjct: 1069 RGVARSAGTDYHGAIEDFTQALSLNEKYASAYNYRGRARAEMGDRQGAIGDLQTAA 1124
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ I F+E + NP+ A+ RG R +G+ A+ D ++AL+ + N + RG
Sbjct: 876 IQGLIERFSEPL-LNPANASAYYNRGFERLDIGDYEGAVDDYTRALQIDGNQPTAYNNRG 934
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F+ DF A+ D + ++L+ Y G A + G+Y A + ++I
Sbjct: 935 LAKFQIGDFAGAISDYTRSLELNDNEAVVYFNRGFARFNQGDYTGAIGDYTESILKAPEQ 994
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + Y L N ++A E + + ++ + + AY+ RGL + + AI D +
Sbjct: 995 TGAYFYRGEAYGRLGNYQQAAEDYSRAIQLNPQDAVAYNNRGLARYNQADYPGAIADYTE 1054
Query: 611 GSR 613
R
Sbjct: 1055 ALR 1057
>gi|330507994|ref|YP_004384422.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928802|gb|AEB68604.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 349
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 125/254 (49%), Gaps = 5/254 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS+ S L +G ++GK+ AIS +D + +DP A + +G A +
Sbjct: 70 RIPKSREASK--WLKKGDDLYDQGKFDEAISCYDNAIGKDPKNKLAWVNKGAALLELMKS 127
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AIS F +A + P + EAW +G A L EAI + A++ P SAD + +GI
Sbjct: 128 DEAISCFDKATELYPKSAEAWNEKGYALNRLDRFDEAIIAFNNAIDINPRSADAWNGKGI 187
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++ + + + A+ G ALS +G+ ++A +A+ KAI ++
Sbjct: 188 ALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNKGWALSGLGKKEEAIQAYNKAISINSKDP 247
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+W DL ++A++ + + +D + + ++ +G +GL ++++A++ +
Sbjct: 248 SSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRYEEALEAFNK- 306
Query: 612 SRTMMPH--LIWNL 623
+ + P LIW+
Sbjct: 307 AIEIDPQEALIWHF 320
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D +GIA N GK+ AI +D+ + P + A +G A + + E AI +
Sbjct: 178 SADAWNGKGIALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNKGWALSGLGKKEEAIQAYN 237
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI N +W +G A A LG+ EA++ +A+E +P A + + +G + +
Sbjct: 238 KAISINSKDPSSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRY 297
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+E + +++D + + + G L ++ ++++ A KA +L
Sbjct: 298 EEALEAFNKAIEIDPQEALIWHFKGETLKALNRTEESDSAFAKAKEL 344
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ AI F+ + +P +A G+G A + + AI + AI P AW +
Sbjct: 160 RFDEAIIAFNNAIDINPRSADAWNGKGIALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNK 219
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + LG+ EAIQ +KA + ++ +
Sbjct: 220 GWALSGLGKKEEAIQAYNKA----------------------------------ISINSK 245
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ S++ G AL+ +G++ +A +A+ +AI+LD W + + L+ E+ALE
Sbjct: 246 DPSSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRYEEALEAFN 305
Query: 576 QVLYIDKRFSKAYHLRGLLLHGL 598
+ + ID + + +H +G L L
Sbjct: 306 KAIEIDPQEALIWHFKGETLKAL 328
>gi|298375300|ref|ZP_06985257.1| TPR domain protein [Bacteroides sp. 3_1_19]
gi|298267800|gb|EFI09456.1| TPR domain protein [Bacteroides sp. 3_1_19]
Length = 681
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++K P E R A+ + + A D T +Q NP +A+ RG
Sbjct: 13 YVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFKGAEEDCTLCLQRNPFLTQAYYARG 72
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + + EAI D K LEF+P +L + + KD+N A + + +
Sbjct: 73 IARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKY 132
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y G G+ KA + KAI++D + A+G+ + + + + AL L +
Sbjct: 133 SMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNE 192
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----LSSGSRTMMPHLIWNLTRWR 627
L +D R S Y RGL+ + + + A+ D +S SR ++ L R++
Sbjct: 193 ALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQ 247
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 70 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 129
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 130 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 189
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 190 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 247
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++ +A+E V+ + AY+ R LL G ++ A++D
Sbjct: 248 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQD 291
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 592 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 651
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 652 DVNRGIADLSKAGE 665
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 103 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 162
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 163 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 222
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 223 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 263
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 137 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 196
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 197 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 256
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 257 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 306
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 581 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 638
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 639 AYYNRGLARLSQGDVNRGIADLSKAGEL 666
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 203 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 262
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 263 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 322
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 323 DRDYWAAIKMEEQAKNG 339
>gi|428203744|ref|YP_007082333.1| hypothetical protein Ple7327_3576 [Pleurocapsa sp. PCC 7327]
gi|427981176|gb|AFY78776.1| tetratricopeptide repeat protein [Pleurocapsa sp. PCC 7327]
Length = 297
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+DFT AI+ NP +++ R A ALG AI D KA+E PN A R
Sbjct: 76 DFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELNPNYAYAYGNR 135
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ K ++ AV D + ++L+ + Y Y G A ++ ++++A E + +AI+L +
Sbjct: 136 CYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIEDYTEAIRLKDD 195
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y L +KAL+ + + +D+ + A++ RG++ LG ++AI D+
Sbjct: 196 SANTYYKRALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLGNEEEAIADIE 255
Query: 610 SGSR 613
+
Sbjct: 256 QAVK 259
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G + AI+ F + ++ +P P++ R A + AI D+ +AI+ N
Sbjct: 66 NQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R A + +A+ D +KA+E EP AD RG A+ED
Sbjct: 126 PNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIED 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L ++ + Y LA ++ EY+KA + + ++I+LD + +A+ L
Sbjct: 186 YTEAIRLKDDSANTYYKRALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLG 245
Query: 566 NSEKALECLQQVL 578
N E+A+ ++Q +
Sbjct: 246 NEEEAIADIEQAV 258
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S + ++ +P + I RG A+ + E AI D+TEAI+ + + +R
Sbjct: 144 RYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIEDYTEAIRLKDDSANTYYKR 203
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DK 514
A AL E +A+ D ++++ + + AD ++RGIVN K + A+ D+ VKL ++
Sbjct: 204 ALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLGNEEEAIADIEQAVKLFNE 263
Query: 515 ENK 517
+NK
Sbjct: 264 QNK 266
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + DF A+ D + ++L+ E+ +Y A ++G Y+ A + + KAI+L
Sbjct: 65 YNQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIEL 124
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N+ A+G+ + + + A+ + + ++ + + Y RG L +H++AI+
Sbjct: 125 NPNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIE 184
Query: 607 DLSSGSR 613
D + R
Sbjct: 185 DYTEAIR 191
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G + G+ AI D ++A+E P D + R ++ A++D ++
Sbjct: 64 WYNQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIE 123
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ AY A + Y A KAI+L+ + + + L E+A+
Sbjct: 124 LNPNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAI 183
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E + + + + Y+ R L L +++KA+ D + R
Sbjct: 184 EDYTEAIRLKDDSANTYYKRALAYGALEEYQKALDDYTESIR 225
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++ KAI L+ A +Y NR + + ++ + + DC KA++L+P L YI
Sbjct: 114 AIDDYGKAIE-LNPNYAYAY-----GNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYI 167
Query: 108 LKGCAFSALGRKEEALSVW 126
+G A AL + EEA+ +
Sbjct: 168 YRGDAQDALDKHEEAIEDY 186
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AIR+ D Y+ RA Y LE ++ + D ++++LD +L A+
Sbjct: 182 AIEDYTEAIRLKDDSANTYYK------RALAYGALEEYQKALDDYTESIRLDESLADAFY 235
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G S LG +EEA++ E+
Sbjct: 236 QRGIVNSKLGNEEEAIADIEQA 257
>gi|124023735|ref|YP_001018042.1| hypothetical protein P9303_20371 [Prochlorococcus marinus str. MIT
9303]
gi|123964021|gb|ABM78777.1| Hypothetical protein P9303_20371 [Prochlorococcus marinus str. MIT
9303]
Length = 233
Score = 83.2 bits (204), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ + ++S +V F +RG A+ Y AI+ + + + +P Y +A RG A+ +
Sbjct: 38 TQTAVAQSAAVFF--NRGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGD 95
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ NP EA+ RG A+ L + AI D +KA+ +P D + RG
Sbjct: 96 YQGAIADYNKAIEINPQDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRG 155
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
I K D+ A+ D S ++++ ++ +AY+ G+
Sbjct: 156 IAKRKSGDYQGAIADYSKIIEINPQDAAAYSNRGI 190
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 70/127 (55%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A+ ++ + AI+D+T+AI NP +A+ RG A+ G+ AI D +KA+E P
Sbjct: 52 RGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYNKAIEINP 111
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ + RG + KD+ A+ D + + +D ++ AY G+A G+Y+ A +
Sbjct: 112 QDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDYQGAIADY 171
Query: 541 LKAIQLD 547
K I+++
Sbjct: 172 SKIIEIN 178
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ L + AI D +KA+ P AD + RGI K D+ A+ D + ++++
Sbjct: 52 RGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYNKAIEINP 111
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ AY G A + +Y+ A + KAI +D +A+ + + + + A+
Sbjct: 112 QDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDYQGAIADY 171
Query: 575 QQVLYIDKRFSKAYHLRGLLLH-GLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNA 633
+++ I+ + + AY RG+ G K A D + + I W N A
Sbjct: 172 SKIIEINPQDAAAYSNRGITKGIGFSDRKGACSDFKKAASLGYQYRI----NWLNSADGA 227
Query: 634 W 634
W
Sbjct: 228 W 228
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA + RG + KD+ A+ D + + ++ + AY G+A G+Y+ A +
Sbjct: 45 SAAVFFNRGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYN 104
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+++ EA+ + +L + + A+ + + ID + AY+ RG+ G +
Sbjct: 105 KAIEINPQDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDY 164
Query: 602 KKAIKDLS 609
+ AI D S
Sbjct: 165 QGAIADYS 172
>gi|390947945|ref|YP_006411705.1| hypothetical protein Alfi_2764 [Alistipes finegoldii DSM 17242]
gi|390424514|gb|AFL79020.1| tetratricopeptide repeat protein [Alistipes finegoldii DSM 17242]
Length = 662
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A ++
Sbjct: 126 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G Y +AE KAI+ D +L ++ + Y +
Sbjct: 186 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AL +V+ +D S Y R +L +G + +A++D
Sbjct: 246 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALED 286
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RRG EA D +KA+E + R +V A+ D
Sbjct: 193 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N Y + + IG+Y +A E + K N + + + Y L
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
EKA E + + F+ AY RG L L + A KD + + + +
Sbjct: 313 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKDRDTAQKKIAEY 365
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RG++Q +Y +A++ F ++ +P P + R T RA +QR
Sbjct: 487 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +AI+ P ++ R RA G EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E PN A+ + RGI+ KD D+S +L
Sbjct: 607 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++A ++ A++ F+ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
+ + A+ L+ + + + AV DL+ +KL + AY+Y A L ++ G
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 599
Query: 535 KAEEAHLKAIQLDRNFLEAW 554
+A E + KAI+L+ NF EA+
Sbjct: 600 EAFEDYTKAIELNPNFAEAY 619
>gi|414075842|ref|YP_006995160.1| hypothetical protein ANA_C10547 [Anabaena sp. 90]
gi|413969258|gb|AFW93347.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 404
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + +G + +R+ + AI+ TEAI+ +P EA+ RRG A + + + +AI DL K+
Sbjct: 146 EEFLKQGNDKLDKRDSQGAINTLTEAIRLDPKFAEAYSRRGVAYSNIENNQKAIDDLQKS 205
Query: 476 LEF---EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ + N++ H++G + KD+ A+ + + LD + Y G+A S+G+
Sbjct: 206 VKLFATQGNNSASKHDQGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGD 265
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A +AI+++ NF A+ DL + + A+ Q + I+ F+ AY RG
Sbjct: 266 KQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRG 325
Query: 593 LLLHGLGQHKKAIKDLS 609
+ + LG + AI D +
Sbjct: 326 YIHYELGDKQAAIADYT 342
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G +AI+ F+Q +K +P + A RG +R+ + +AAI+DF +AI+ N
Sbjct: 255 NRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKIN 314
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+K RG LG+ AI D ++A++ P + H G +++ D AA+ D
Sbjct: 315 PNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIAD 374
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK 535
VKL ++ K L +A I E +K
Sbjct: 375 FQQAVKLYQQQKGNEELLKIAQDRIRELQK 404
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+++++ + DP RG A + +AAI+DF +AI+ NP+ A+ +RG
Sbjct: 232 YQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRG 291
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+R+ LG+ AI D ++A++ PN A RG ++++ D AA+ D + +K++ +
Sbjct: 292 NSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKY 351
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
AY LG +G+ + A +A++L
Sbjct: 352 SKAYHVLGYIHYDLGDKQAAIADFQQAVKL 381
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G R + ++ + AI+ + E+I +P ++ RG A +LG+ AI D ++A++ P
Sbjct: 222 QGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKINP 281
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A H+RG D AA+ D + +K++ AY G +G+ + A +
Sbjct: 282 NFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIADY 341
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+AI+++ + +A+ L + DL + + A+ QQ +
Sbjct: 342 TQAIKINPKYSKAYHVLGYIHYDLGDKQAAIADFQQAV 379
>gi|291515779|emb|CBK64989.1| Tetratricopeptide repeat [Alistipes shahii WAL 8301]
Length = 662
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEDDFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A E+
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G +YK+AE KAI+ D +L ++ + Y
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAIECDSAYLLSYFNRALVYNATNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+AL +V+ +D S Y R +L +G + A++D
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALED 286
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RRG + EA D +KA+E + R +V A+ D
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAIECDSAYLLSYFNRALVYNATNRPMQALAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N Y + + IG+Y A E + K N + + + Y L
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
E+A+E + + F+ AY RG L L + A +D S R + +
Sbjct: 313 EIERAVEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKEDRSIAQRKIAEY 365
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
R + Q +Y +++S + ++ +P P + R T RA +QR
Sbjct: 487 FERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +A++ P A+ R A G EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAFEDYT 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+ P A+ + RGI+ KD DLS +L
Sbjct: 607 KAISLNPAFAEAYYNRGIIQLFMKDTRKGCLDLSKAGEL 645
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L R ++ ++ ++S ++ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + A+ L+ + + + AV DL+ VKL + AY L+ G +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601
Query: 537 EEAHLKAIQLDRNFLEAW 554
E + KAI L+ F EA+
Sbjct: 602 FEDYTKAISLNPAFAEAY 619
>gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 268
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V + + S+ ++ ++G+ ++ +G YA AIS F LK +P + RG A
Sbjct: 32 VVQEAPSEELTAVELYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLG 91
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+AAI D+T+AI+ NP +A+ RG + +AI D +KA+E +P + R
Sbjct: 92 NYDAAIYDYTQAIKLNPDFSQAYSNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISR 151
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + A+ D + ++++ EN Y GL + + +Y+ A + K+I+L
Sbjct: 152 GNAYDELGNSEEALNDYAKALEINPENARLYYNRGLTRNRLEQYEDAIADYTKSIELQPT 211
Query: 550 FLEAWGH--LTQFYQDLANSEKALECLQQV 577
F EA+ + LTQF L N E A LQ+
Sbjct: 212 FAEAYYNRGLTQF--QLENIEAATADLQKA 239
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + + + AISDF +A++ P + + RG A +LG AI D ++A++
Sbjct: 46 LYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIK 105
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ + RG F +D+ A+ D + +++D EN +AY G A +G ++A
Sbjct: 106 LNPDFSQAYSNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEAL 165
Query: 538 EAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ KA++++ + L Q+ +A+ K++E + F++AY+
Sbjct: 166 NDYAKALEINPENARLYYNRGLTRNRLEQYEDAIADYTKSIE-------LQPTFAEAYYN 218
Query: 591 RGLLLHGLGQHKKAIKDLSSGS 612
RGL L + A DL +
Sbjct: 219 RGLTQFQLENIEAATADLQKAA 240
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG Y AI+ F + ++ DP A I RG A E A++D+ +A++ N
Sbjct: 116 NRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEIN 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG R L + +AI D +K++E +P A+ + RG+ F+ ++ AA D
Sbjct: 176 PENARLYYNRGLTRNRLEQYEDAIADYTKSIELQPTFAEAYYNRGLTQFQLENIEAATAD 235
Query: 506 LSACVKLDKE 515
L +L KE
Sbjct: 236 LQKAAELFKE 245
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AI+ L+ +Q+Y NR + Y ++ I D KA+++DP AY
Sbjct: 95 AAIYDYTQAIK-LNPDFSQAY-----SNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAY 148
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
I +G A+ LG EEAL+ + K E
Sbjct: 149 ISRGNAYDELGNSEEALNDYAKALE 173
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D +SRG A G A++ + + L+ +P RG R +
Sbjct: 135 TKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEINPENARLYYNRGLTRNRLEQ 194
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHER 489
E AI+D+T++I+ P+ EA+ RG + L E++E A DL KA E + +
Sbjct: 195 YEDAIADYTKSIELQPTFAEAYYNRGLTQFQL-ENIEAATADLQKAAELFKEQGRLDSHQ 253
Query: 490 GIVN 493
+VN
Sbjct: 254 SVVN 257
>gi|365899853|ref|ZP_09437735.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419376|emb|CCE10277.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 183
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L RG + +G AI +++ DP A +GRG A ++E AISD+ EAI+
Sbjct: 18 KLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYRMKKEFNRAISDYDEAIR 77
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP A+ RG A + AIQDL A+ P+ ++ RG+ + + ++ A+
Sbjct: 78 LNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAFMNRGLAHARLRESERAI 137
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
D + +++D N A+ G+A ++ G+ +A+
Sbjct: 138 ADFTEAIRIDPRNAVAFHNRGVAYAAKGDGARAK 171
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++D+ E+I+ P++ + RG A G +AI+DLS+ + +P+SA RG
Sbjct: 1 MADYKESIRIAPNSASSKLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYR 60
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K+FN A+ D ++L+ ++ SA+ G A+ + Y++A + A++L+ ++ EA+
Sbjct: 61 MKKEFNRAISDYDEAIRLNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAF 120
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + L SE+A+ + + ID R + A+H RG+ G +A D
Sbjct: 121 MNRGLAHARLRESERAIADFTEAIRIDPRNAVAFHNRGVAYAAKGDGARAKADF 174
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y AI D ++ +P Y EA + RG A A RE E AI+DFTEAI+ +
Sbjct: 88 NRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAFMNRGLAHARLRESERAIADFTEAIRID 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKA 475
P A+ RG A AA G+ A D +A
Sbjct: 148 PRNAVAFHNRGVAYAAKGDGARAKADFDQA 177
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D +++ PNSA RG N A+ DLS + +D + SA+ G A
Sbjct: 1 MADYKESIRIAPNSASSKLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYR 60
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
E+ +A + +AI+L+ A+ + + N E+A++ L + ++ +S+A+
Sbjct: 61 MKKEFNRAISDYDEAIRLNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAF 120
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGSR 613
RGL L + ++AI D + R
Sbjct: 121 MNRGLAHARLRESERAIADFTEAIR 145
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 11 YRLNKT-HKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL--LAQSY 67
YR+ K ++ I + DE +R++ ASA R A + ++N+ +AI+ LD L SY
Sbjct: 59 YRMKKEFNRAISDYDEAIRLNPKDASAFNNR--GAAMIYVQNYERAIQDLDDAVRLNPSY 116
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALG 117
+ NR +++L + I D +A+++DP A+ +G A++A G
Sbjct: 117 S-EAFMNRGLAHARLRESERAIADFTEAIRIDPRNAVAFHNRGVAYAAKG 165
>gi|436837943|ref|YP_007323159.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
gi|384069356|emb|CCH02566.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
Length = 450
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 16/233 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ G A+A++ F++ P L RG + + A++DF A++ +
Sbjct: 134 NRGLCKLQLGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKS 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG +R L + ++ D S+A+E P AD+ ++RG+V + +F+ AV D
Sbjct: 194 PNKTTALSGRGYSRFKLEDYKGSLADFSRAIELAPTDADLFYKRGLVKTRMGEFDNAVVD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G S G K A K+I++D ++ + ++F
Sbjct: 254 YNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFI---- 309
Query: 566 NSEKALECLQQVLYIDKRF---------SKAYHLRGLLLHGLGQHKKAIKDLS 609
++ L V + +R+ + AY +RG+L + G K A+ DL+
Sbjct: 310 -TQNMLPLFATV--VQERYKVAELGDDRADAYIVRGMLKNANGDSKPALLDLN 359
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A+ + A+S DQ ++ +P A + RG R+ + A+ DF A++ +
Sbjct: 66 NRALAKTSLNDIQGAVSDLDQAIELNPQEANAYLYRGINRSKLEDNRGAMQDFNRAVELS 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + LG S A+ D ++A PN A+IL RG DF A+ D
Sbjct: 126 PNDAFLYYNRGLCKLQLGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALAD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWG----HLT 558
++ +A + G + + +YK + +AI+L D + G +
Sbjct: 186 FGLALEKSPNKTTALSGRGYSRFKLEDYKGSLADFSRAIELAPTDADLFYKRGLVKTRMG 245
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+F + + K LE ++ KAY RG G K A+ DL
Sbjct: 246 EFDNAVVDYNKTLE-------LNPNHYKAYFSRGFCRSRTGNAKVALGDL 288
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+ +VDF + GI + N + A+ F + +P + R A+ +++ A+
Sbjct: 23 SQQTAVDF-FNEGIQKSNAKDFTGALQAFTTAIIMNPENAPSYYNRALAKTSLNDIQGAV 81
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD +AI+ NP A+ RG R+ L ++ A+QD ++A+E PN A + + RG+ +
Sbjct: 82 SDLDQAIELNPQEANAYLYRGINRSKLEDNRGAMQDFNRAVELSPNDAFLYYNRGLCKLQ 141
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLE 552
AA+ D + L + + T G + + +++ A A++ N L
Sbjct: 142 LGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKSPNKTTALS 201
Query: 553 AWGH----LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
G+ L + LA+ +A+E + + ++ RGL+ +G+ A+ D
Sbjct: 202 GRGYSRFKLEDYKGSLADFSRAIE-------LAPTDADLFYKRGLVKTRMGEFDNAVVD 253
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + A++ F L++ P AL GRG +R + + +++DF+ AI+
Sbjct: 168 ARGNCKNGLNDFRGALADFGLALEKSPNKTTALSGRGYSRFKLEDYKGSLADFSRAIELA 227
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + +RG + +GE A+ D +K LE PN RG + + A+ D
Sbjct: 228 PTDADLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGD 287
Query: 506 LSACVKLDK---ENKSAYT------YLGLALSSIGE-YKKAE------EAHL-------- 541
L +++D + K+ Y+ L L + + E YK AE +A++
Sbjct: 288 LDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNA 347
Query: 542 ------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+A++L+ E++ L + + A+ + ++ R ++AY+
Sbjct: 348 NGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYY 407
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
LRGL+ + G DLS
Sbjct: 408 LRGLIRYDTGDEVSGCADLS 427
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D RG+ + G++ +A+ +++ L+ +P + +A RG R+ + A+ D +
Sbjct: 231 ADLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDK 290
Query: 441 AIQSNPSA------------------------------------GEAWKRRGQARAALGE 464
+I+ + + +A+ RG + A G+
Sbjct: 291 SIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNANGD 350
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S A+ DL++A+E P SA+ RGI+ D A+ D ++ V+L+ + AY G
Sbjct: 351 SKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYYLRG 410
Query: 525 LALSSIGE 532
L G+
Sbjct: 411 LIRYDTGD 418
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 366 KKFCVTRISKSK--------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE- 416
+ FC +R +K SI +D R + A +E + + +F +++E E
Sbjct: 271 RGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAEL 330
Query: 417 ------ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
A I RG + + + A+ D A++ NP++ E++ RG R++LG+ A+
Sbjct: 331 GDDRADAYIVRGMLKNANGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMI 390
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
D + + P A+ + RG++ + D ++S C L + + Y
Sbjct: 391 DCNSTVRLNPRHAEAYYLRGLIRYDTGD------EVSGCADLSRSGELGYV 435
>gi|311271182|ref|XP_001926679.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Sus
scrofa]
Length = 804
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 288 ALLLNQNHVQTLQLRGVMLYHHGSLQEALKNF 319
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 180 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 239
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 240 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 299
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 300 QLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 357
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 180 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 238
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 239 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 298
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 299 LQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 351
>gi|119590336|gb|EAW69930.1| tetratricopeptide repeat domain 13, isoform CRA_b [Homo sapiens]
Length = 639
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 3 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 61
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 122 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 153
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 14 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 73
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 74 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 133
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 134 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 191
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 14 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 72
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 73 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 132
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 133 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 185
>gi|425460628|ref|ZP_18840109.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9808]
gi|389826672|emb|CCI22671.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9808]
Length = 317
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + + GI Q+ G Y A+ F+Q L+++ A R + + ++ A
Sbjct: 42 AQSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTKIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIWLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L ++++ L Q + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|398825329|ref|ZP_10583630.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
gi|398223937|gb|EJN10265.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
Length = 368
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
SR N+G+ AI+ F + ++ +P +Y L+ RG A A + + + A++D+TEA++
Sbjct: 120 SRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLM-RGQAYAAKGDTDRAVADYTEAMR 178
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+A ++ R R GE A+ D + ++ EP SA R +V K+ D + A+
Sbjct: 179 LNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPGSAGGHFCRAVVLLKWDDADGAI 238
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ +LD AY+ LA G+ K+A +AI+L + + ++
Sbjct: 239 QEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMALRE 298
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L +AL + L ID R A R LL + K A D +S
Sbjct: 299 LGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNS 345
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G A++ +++ ++ DP Y + R + EL+ AI+ FTEAI+ NP
Sbjct: 87 RGRAYSARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNP 146
Query: 447 S-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A RGQA AA G++ A+ D ++A+ P +A R V +F+AA++D
Sbjct: 147 KHIYFATLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDD 206
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L+ + + + L + A + + +LD F+ A+ +
Sbjct: 207 CNNSVRLEPGSAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKG 266
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ ++A+ + + + + Y R + L LGQH +A+ D + R
Sbjct: 267 DDKRAVADFDEAIRLQPGNATGYKNRAMALRELGQHARALADYNEALR 314
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
I+ DP A RG A +R+ + A D + AI+ +P+ G A+ RG+A +A G+
Sbjct: 39 IIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYSARGDRD 98
Query: 467 EAIQDLSKALEFEPN-------SADILHERGIVNFKFKDFNAAVE--------------- 504
A+ D ++A+ +PN A+ +G ++ F A+E
Sbjct: 99 HAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLMRGQ 158
Query: 505 -------------DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D + ++L+ S Y + GE+ A + +++L+
Sbjct: 159 AYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPG-- 216
Query: 552 EAWGHLTQFYQDLA--NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A GH + L +++ A++ +V +D F +AY R L H G K+A+ D
Sbjct: 217 SAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFD 276
Query: 610 SGSRTMMPHLIWNLTRWRN 628
R + P N T ++N
Sbjct: 277 EAIR-LQP---GNATGYKN 291
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI FD++ + DP + A R A + + + A++DF EAI+ P +K R A
Sbjct: 236 GAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMA 295
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ A+ D ++AL +P D L R ++ D A D ++ + L +K
Sbjct: 296 LRELGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPNDKW 355
Query: 519 A 519
A
Sbjct: 356 A 356
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I++ T I ++P+ A++ RG+A + A D S A+ +PN + RG
Sbjct: 33 IAEKTAIIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYS 92
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEA 553
D + A+ D + ++LD +YT + GE A +AI+ + ++ A
Sbjct: 93 ARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFA 152
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q Y ++++A+ + + ++ + Y LR + G+ A+ D ++ R
Sbjct: 153 TLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVR 212
>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
Length = 707
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ + Q LK +P Y EAL G+ A A QR E A++ + +AIQ NP SA AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALQRYSE-ALNTYEKAIQINPDSAWAAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A LG++ EA+ + L F P ++ + + + + ++AA + L +
Sbjct: 406 GRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W + L ALE
Sbjct: 466 QNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + +FS+A++ +G++L LG+ +A++ + +
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQAT 564
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P A +GRG A + + A++ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEP 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G + + + A E++ KA Q + F +A H +Q Q L +AL+
Sbjct: 501 DNALIWYQKGNSFYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALQ 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH + + ++AI R
Sbjct: 559 AFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARR 599
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A++ FD++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL EP++A I +++G ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A +A +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+F + +A+ EKA Q + A++ G + +++AI+
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINAYQQAIQ 633
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAWKR 454
Y A+ ++Q L +P ALI +F + ++ A+ +++A Q NP +A
Sbjct: 485 YEGAVKAYEQALAIEP--DNALIWYQKGNSFYQLNKINDALESYSKAGQFNPQFSQAHYS 542
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG EA+Q ++A E N +G + + + F A+ ++
Sbjct: 543 QGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISS 602
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + +G A +G+Y +A A+ +AIQ ++ E W L L E+A++
Sbjct: 603 QKAEVFIGIGNAWYRLGDYPQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAY 662
Query: 575 QQVL 578
Q+ L
Sbjct: 663 QESL 666
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D+ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYPQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ +++ + F T+ +++
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALQAF--TQATEAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDSEEQ 705
>gi|282897473|ref|ZP_06305475.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281198125|gb|EFA73019.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 548
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G Y AIS ++Q++ + + A RG A R +AI DF++AI NP
Sbjct: 305 GLAYYQLGDYDMAISNYNQVINANVNHSNAYNKRGLAHYKSRNYHSAIEDFSQAISINPE 364
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+K R +AR +G+ AI+D S+ L P D+L + +V + FN D
Sbjct: 365 LAINYKNRAEARYLIGDYQGAIEDYSQVLSIHP---DLLDQPILVGDIGELFNIKCHD-- 419
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ +N++ + Y +GEY++A E + +AI L+ N+++A+ + Y +
Sbjct: 420 ---EVIYKNRADHLY------QLGEYEEAVENYNQAIALNINYVDAYYQRGKIYFNRGIY 470
Query: 568 EKALECLQQVLYIDKRFSKAYHLRG 592
E A++ V+ + AY+ RG
Sbjct: 471 EAAVDDFSMVIKTQPNYGDAYYYRG 495
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 32/234 (13%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
+DN S+ + KL + L + + ++ S + + RG+A
Sbjct: 290 ADNISNIDIHAYYKLGLAYYQLGDYDMAISNYNQVINANVNHSNAYN-----KRGLAHYK 344
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS------ 447
Y SAI F Q + +P R AR + + AI D+++ + +P
Sbjct: 345 SRNYHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGAIEDYSQVLSIHPDLLDQPI 404
Query: 448 ----AGE----------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
GE +K R LGE EA+++ ++A+ N D ++RG +
Sbjct: 405 LVGDIGELFNIKCHDEVIYKNRADHLYQLGEYEEAVENYNQAIALNINYVDAYYQRGKIY 464
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTY-------LGLALSSIGEYKKAEEAH 540
F + AAV+D S +K AY Y +G ++ G++KKA + +
Sbjct: 465 FNRGIYEAAVDDFSMVIKTQPNYGDAYYYRGNCWLIMGNKQTASGDFKKAADIY 518
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+F + G + G Y AIS + Q L+ + +Q EL + + + +
Sbjct: 239 VEFYVKLGDKHFDHGDYIVAISNYSQALQNNK----------KNSYYQEELRSEL-NLSH 287
Query: 441 AIQSNPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
N S + A+ + G A LG+ AI + ++ + N ++ ++RG+ ++K ++
Sbjct: 288 KYADNISNIDIHAYYKLGLAYYQLGDYDMAISNYNQVINANVNHSNAYNKRGLAHYKSRN 347
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA---WG 555
+++A+ED S + ++ E Y A IG+Y+ A E + + + + + L+ G
Sbjct: 348 YHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGAIEDYSQVLSIHPDLLDQPILVG 407
Query: 556 HLTQFYQ-----------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ + + L E+A+E Q + ++ + AY+ RG +
Sbjct: 408 DIGELFNIKCHDEVIYKNRADHLYQLGEYEEAVENYNQAIALNINYVDAYYQRGKIYFNR 467
Query: 599 GQHKKAIKDLSSGSRT 614
G ++ A+ D S +T
Sbjct: 468 GIYEAAVDDFSMVIKT 483
>gi|428214976|ref|YP_007088120.1| hypothetical protein Oscil6304_4688 [Oscillatoria acuminata PCC
6304]
gi|428003357|gb|AFY84200.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 291
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ ++ + V+F +G++ G Y AI+ +D+ L+ DP E RG A
Sbjct: 5 ITCARGLEVEFFFRKGLSLSEAGNYTGAIASYDKALELDPNADEIWYCRGNALYNLGRTN 64
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI + A++ NP +A RG A G EA++ + L +P+ + RGI
Sbjct: 65 PAIKSYDMALELNPGCYQALINRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNNRGIA 124
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ A+ ++ + A+ + GLAL S+G +K + KA+ +F E
Sbjct: 125 LGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQPDFYE 184
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
W + L +A+ + + + A++ RG++L L ++++AI L
Sbjct: 185 VWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVSL 240
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N GKY AI+ +D+ ++ P Y A RG A E ++ + +A+ S
Sbjct: 120 NRGIALGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQ 179
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG L EAI KA++ PN + RG+V + A+
Sbjct: 180 PDFYEVWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVS 239
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
L V L+ +N A+ Y LAL ++ + A ++ KA +L N
Sbjct: 240 LDKAVTLNPKNAEAWYYRALALEALDCTRSAAASYDKAYELKPNL 284
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A + G++ A+ +D++L+ P + RG A + + AI+ + AI+
Sbjct: 85 INRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNNRGIALGNLGKYDEAIASYDRAIEF 144
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A ++G + + + KAL +P+ ++ + RG + K ++ A+
Sbjct: 145 KPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQPDFYEVWNNRGNTLYLLKRYSEAIS 204
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+ A+ G+ L + ++A + KA+ L+ EAW +Y+ L
Sbjct: 205 SYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVSLDKAVTLNPKNAEAW-----YYRAL 259
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
A +AL+C + + KAY L+
Sbjct: 260 A--LEALDCTRSAA---ASYDKAYELK 281
>gi|359460421|ref|ZP_09248984.1| hypothetical protein ACCM5_16968 [Acaryochloris sp. CCMEE 5410]
Length = 263
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 412 PMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P P + L+ G +A + + AIS + +AIQSNP A+ RG A LG+ AI
Sbjct: 36 PSEPAQTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIA 95
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ALE EP+ A L+ RG DF A+ DL+ ++L AY + ++
Sbjct: 96 DFNRALEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAV 155
Query: 531 -GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+++KA + +AI +F +A+ + + Y + ++ A+ + + ++ ++AY
Sbjct: 156 QGQWEKALKDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYG 215
Query: 590 LRGLLLHGLGQHKKAIKDL 608
RG++ G + AI DL
Sbjct: 216 NRGMIKAQTGDKQGAIVDL 234
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G Y AISI++Q ++ +P A I RG A + + AI+DF A++
Sbjct: 44 LQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRALEI 103
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
P A RG++R+ +G+ AI DL++A+ +PN A+ + R I+ + + A+
Sbjct: 104 EPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAVQGQWEKAL 163
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+DL+ + + AY G +++ + A + KAI+L+ EA+G+
Sbjct: 164 KDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYGN 216
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP A L + G K ++ A+ + ++ + N SAY Y GLA +G+Y+ A
Sbjct: 38 EP--AQTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIA 95
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++++ + A + + D+ + E A+ L Q + + +++AY++R ++ +
Sbjct: 96 DFNRALEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAV 155
Query: 599 -GQHKKAIKDLS 609
GQ +KA+KDL+
Sbjct: 156 QGQWEKALKDLN 167
>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 465
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI N G++ A+ +++ L+ DP+ E G LE A+ EA + NP
Sbjct: 113 GITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W G LG+ ++ + LE +P SAD + RGIV + F AVE
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYD 232
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + ++ SA+ G AL+++G+ + A E++ K ++++ + ++ Y++L
Sbjct: 233 YALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A++ Q L D +++A++ G L + ++AI
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAI 330
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+ + +P+A +AW RRG + LG EA+Q +AL P + L G
Sbjct: 54 FEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLG 113
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I F A++ +++D N Y LG+ L + ++A +A +A +L+ +
Sbjct: 114 ITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDH 173
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E W L Y L + E++L C + L +D + A++ RG++L+ +G+ ++A++
Sbjct: 174 PEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVE 229
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASA 400
S F D L+E + +F + R+ + D + RGI + G++ A
Sbjct: 32 SSAYFDSDTLEEIATYYYERGRFEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEA 91
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ +++ L +P E L+ G E A+ + A+Q +P E + G
Sbjct: 92 LQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLE 151
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ EA+Q L +A P+ ++ +E G + D ++ ++LD + A+
Sbjct: 152 RMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAW 211
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+ L+ +G +++A E++ A+ + +F AW + +L + A+E ++VL I
Sbjct: 212 YNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEI 271
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ Y+ L L +++ AI+
Sbjct: 272 EGGDPATYYNIALAYEELQEYETAIQ 297
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSI--SVDFRLS-----------RGIAQVNEGKYASAI 401
L S +A N+ + R+ + + S D+ L+ RG A N G AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAI 262
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
++++L+ + P A +E E AI F A++ +P+ EAW G A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
L EAI + +A+ +P +++ + + + + A++ ++LD +N+ A+
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L G +++ +A+ +A+ L+ + A+ + L SE+ + L+ L +D
Sbjct: 383 DYAETLLEAGYVEESLQAYRQALTLNPD-ARAYIRQARALLALGRSEEGIRSLKMALRLD 441
Query: 582 K 582
Sbjct: 442 P 442
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+++ +D+ L+ DP +A RG A+ + A+ G AW RG A
Sbjct: 193 SLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNAL 252
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG+ AI+ K LE E + + + +++ A++ ++ D A
Sbjct: 253 TNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEA 312
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ LG ++ +++A +A+ L E W
Sbjct: 313 WYGLGCCYDALERFEEAIACMERAVTLQPETSEFW 347
>gi|300869518|ref|ZP_07114100.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
gi|300332491|emb|CBN59298.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
Length = 361
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 5/234 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+R + + +++ + A+ +++++ DP A RGT R ++ + I D+ +
Sbjct: 108 DYR-RQAVEKLSNEDFQGALKDLNEVIRLDPTDAYAYFLRGTIRYILKDYQGTIEDYNQV 166
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P+ + RG + LGE AI+D S+ ++ +PN++ + RG++ KD+
Sbjct: 167 LKLDPNNILVYGFRGDLYSQLGEYQAAIEDYSQVIKLDPNNSSVYLNRGLIRDTIKDYQG 226
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALS-SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + +KLD N AY + +G+Y+ A ++I+LD A+ + ++
Sbjct: 227 AIEDYNQLLKLDPNNSMAYNNRCYTRARGLGDYQGAIADCNESIRLDPE--NAYAYASRC 284
Query: 561 YQDLA-NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Y KA+E + L ++ ++ Y R L L AI DL ++
Sbjct: 285 YTRAGLGDTKAIEDCDRALELNSEYAGGYEDRALARSILEDKSGAIADLKQAAK 338
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
L+RG+ + Y AI ++Q+LK DP A R RA + + AI+D E+I+
Sbjct: 212 LNRGLIRDTIKDYQGAIEDYNQLLKLDPNNSMAYNNRCYTRARGLGDYQGAIADCNESIR 271
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P A+ R RA LG++ +AI+D +ALE A +R + +D + A+
Sbjct: 272 LDPENAYAYASRCYTRAGLGDT-KAIEDCDRALELNSEYAGGYEDRALARSILEDKSGAI 330
Query: 504 EDLSACVKLDKENKSAYTY 522
DL KL KE + + Y
Sbjct: 331 ADLKQAAKLYKEQEKMFDY 349
>gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++ K V+F + G+A N Y A+ FDQ +K + Y +AL +G A
Sbjct: 200 SQVYNLKGKFVNFLV--GMALRNLNHYQEALECFDQAIKINSSYSDALNNKGNALFNMCH 257
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AA+ + +AI+ N + +A +G L +AI+ +A++ PN + ++ +G
Sbjct: 258 YQAALQCYDQAIRINSNDSDACYNKGNTLFILNRYQDAIESYDQAIKINPNYIEAIYNKG 317
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I F F A+E + +D AY G+AL ++ Y++A + + +A +++ N
Sbjct: 318 IALFNLNRFQDAIECYDHVIAIDSNYNDAYYNKGIALFNLNRYQEALDCYDQATRINPNQ 377
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A+ + L E+ALEC Q ID S +++ +G L
Sbjct: 378 SDAFYNKGNALYILKRYEEALECYNQSNKIDINDSDSFYNKGKL 421
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ------- 457
DQ+ +D MY EA+I F +++ + + + + +G+
Sbjct: 174 DQLFDQD-MYKEAIIL-----------------FDDSLNYDCNQSQVYNLKGKFVNFLVG 215
Query: 458 -ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L EA++ +A++ + +D L+ +G F + AA++ ++++ +
Sbjct: 216 MALRNLNHYQEALECFDQAIKINSSYSDALNNKGNALFNMCHYQAALQCYDQAIRINSND 275
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A G L + Y+ A E++ +AI+++ N++EA + +L + A+EC
Sbjct: 276 SDACYNKGNTLFILNRYQDAIESYDQAIKINPNYIEAIYNKGIALFNLNRFQDAIECYDH 335
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
V+ ID ++ AY+ +G+ L L ++++A+ +R
Sbjct: 336 VIAIDSNYNDAYYNKGIALFNLNRYQEALDCYDQATR 372
>gi|427716795|ref|YP_007064789.1| hypothetical protein Cal7507_1491 [Calothrix sp. PCC 7507]
gi|427349231|gb|AFY31955.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 726
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 51/245 (20%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F Q + ++P + +A + RG AR ++ E A++D+TEA+Q NP +A+ RG
Sbjct: 468 YERAIDNFSQAIAQEPHHAKAHVNRGNARYNLKDYEGALTDYTEALQINPQEVKAFVNRG 527
Query: 457 QARAALG--------ESVEAIQDLSKALEFEPNSADILHERGIVNFKF--------KDFN 500
R L E +AI D + AL + + RG+V + KD+
Sbjct: 528 NVRYVLADFSNDPDKEYNQAISDFNNALRLDNKEIEAYVRRGVVRSQIAKYSGDSQKDYR 587
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + +KL+ AY G+ S I +Y + ++
Sbjct: 588 RAIEDFTQAIKLNASKAEAYFQRGVVYSQIAQYSS-------------------DYTREY 628
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH---------KKAIKDLSSG 611
Q +A+ AL I+ + +KAY RG++ + L Q+ +AI+DL +
Sbjct: 629 KQAIADFNHALS-------INAKLAKAYLKRGIVRYELAQYGGRESEANRMRAIEDLQAS 681
Query: 612 SRTMM 616
++ +
Sbjct: 682 AKISL 686
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAIS 436
++RG A+ N Y A++ + + L+ +P +A + RG R +E AIS
Sbjct: 490 VNRGNARYNLKDYEGALTDYTEALQINPQEVKAFVNRGNVRYVLADFSNDPDKEYNQAIS 549
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAAL----GESVE----AIQDLSKALEFEPNSADILHE 488
DF A++ + EA+ RRG R+ + G+S + AI+D ++A++ + A+ +
Sbjct: 550 DFNNALRLDNKEIEAYVRRGVVRSQIAKYSGDSQKDYRRAIEDFTQAIKLNASKAEAYFQ 609
Query: 489 RGIVNFKF--------KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY--KKAEE 538
RG+V + +++ A+ D + + ++ + AY G+ + +Y +++E
Sbjct: 610 RGVVYSQIAQYSSDYTREYKQAIADFNHALSINAKLAKAYLKRGIVRYELAQYGGRESEA 669
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++AI+ L+A ++ +D+ N +++L +
Sbjct: 670 NRMRAIED----LQASAKISLEQEDMDNYQQSLSSI 701
>gi|428320554|ref|YP_007118436.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244234|gb|AFZ10020.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 411
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG Q+ +G + AI+ +D+ L+ P EA RG A LE AI+ + +A++
Sbjct: 162 NRGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIK 221
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A LG +AI KALE +P+ + + RG+ +
Sbjct: 222 PDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIAS 281
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL +G + A + KA++ + EAW L
Sbjct: 282 YDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLG 341
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + L + +A+++RG+ L LG+ + AI
Sbjct: 342 RIEDAVASWDKALKFKPDYHEAWYIRGVALVKLGRIEDAI 381
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG + + + E AI+ + +A++ P + EAW RG A LG +AI KA
Sbjct: 158 EACWNRGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKA 217
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE +P+ + + RG+ A+ +++ + A+ G+AL ++G +
Sbjct: 218 LEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEN 277
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
++ KA+++ ++ EAW + +DL E A+ + L +A+++RGL L
Sbjct: 278 EIASYDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLAL 337
Query: 596 HGLGQHKKAI 605
LG+ + A+
Sbjct: 338 GKLGRIEDAV 347
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I D + RG+A N G+ AI+ +D+ L+ P Y EA RG A
Sbjct: 210 AITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVAL 269
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE I+ + +A++ P EAW RG A LG +AI KAL+F+P+ +
Sbjct: 270 GNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEA 329
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ K AV +K + A+ G+AL +G + A + KA++
Sbjct: 330 WYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAWYIRGVALVKLGRIEDAITSFDKALK 389
Query: 546 L 546
Sbjct: 390 F 390
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + +RG A + G+ AI+ +D+ L+ P EA RG A A LE AI+
Sbjct: 187 KPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIA 246
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A++ P EAW RG A LG I KALE +P+ + + RG+
Sbjct: 247 SYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDL 306
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ +K + A+ GLAL +G + A + KA++ ++ EAW
Sbjct: 307 GRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAW 364
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ +RG+A N G+ + I+ +D+ L+ P Y EA RG A
Sbjct: 244 AIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVAL 303
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+E AI+ +A++ P EAW RG A LG +A+ KAL+F+P+ +
Sbjct: 304 RDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEA 363
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ RG+ K A+ +K ++ A +AL +G
Sbjct: 364 WYIRGVALVKLGRIEDAITSFDKALKFKPDDHLASKNRTIALKKLG 409
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR L + I CDKAL+ P L +A+ ++G A LGR E+A++ W+K
Sbjct: 298 NRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDK 352
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 61 SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKE 120
+L + Y + NR L + I DKAL++ P L +A+ ++G A + LGR E
Sbjct: 183 ALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLE 242
Query: 121 EALSVWEKGYE 131
+A++ ++K E
Sbjct: 243 DAIASYDKALE 253
>gi|428312764|ref|YP_007123741.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
gi|428254376|gb|AFZ20335.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
Length = 789
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL G A ++G+ A AI+ + +K P Y EA G A Q L AAI + +AI
Sbjct: 76 YRL--GSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAI 133
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NP+ EA G+ AI +A+ +P+ +I + G + + +AA
Sbjct: 134 ALNPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAA 193
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + L+ A+ LG +L S+G+Y++A + +A+ L+ N L+ + L
Sbjct: 194 MIQYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALM 253
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ EKA C QQ L ++ + Y L L Q ++AI
Sbjct: 254 HLSRFEKATHCFQQALILNPEHPEVYQKLALALASQNQLEEAI 296
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
++G+ +AI+ + Q + P PE G Q +L+AA+ + A+ NP+ +A
Sbjct: 152 HQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAH 211
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ G + +LG+ EAI +AL EPN D + G F A + L
Sbjct: 212 LQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQALIL 271
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ E+ Y L LAL+S + ++A + KA+ L+ NF+EA+
Sbjct: 272 NPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVEAY 313
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
G + A I QIL++ P EAL +GR + +LE AI+ + + I P EA+
Sbjct: 18 GNLSHAEWICQQILQQQPNSTEALDLLGRMAHQV--GKLEEAIAYYQKLIALLPDYAEAY 75
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R G A + G+ EAI A++ +P+ + + G + + AA+E + L
Sbjct: 76 YRLGSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIAL 135
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ A+ L L G+ + A + +AI + + E + +L + + A+
Sbjct: 136 NPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMI 195
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q L ++ + A+ G LH LG++++AI
Sbjct: 196 QYQWALALNPNYIDAHLQLGTSLHSLGKYEEAI 228
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L G + + GKY AI + Q L +P + + G A E A F +
Sbjct: 208 IDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQ 267
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A+ NP E +++ A A+ + EAI KAL N +
Sbjct: 268 ALILNPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVE 311
>gi|431808188|ref|YP_007235086.1| hypothetical protein BPP43_08170 [Brachyspira pilosicoli P43/6/78]
gi|430781547|gb|AGA66831.1| TPR repeat-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 686
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E K+ AI + ++ +++D E +GR + + E AI D+ AI+ N + +
Sbjct: 15 EKKFEEAIKLSNEAIEKDNKNYELYVGRASLKNVIGLYEDAIKDYNIAIELNNKDPKIYW 74
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG ++ L + AI+D A++ N+ I +RG++ D A+ D + +KL+
Sbjct: 75 QRGYIKSILIDYKGAIEDFDTAIKLGINAPRIFLDRGVIKSNLHDHTDAINDFNIAIKLN 134
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKA 570
AY + L+ +G Y+ + AI+L+ N+ A+ G L F L N ++A
Sbjct: 135 PYYAEAYNFRALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLF---LKNYDQA 191
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L+ L IDK +Y R + + LG ++ AIKD
Sbjct: 192 LKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIKD 228
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI FD +K P + RG ++ + AI+DF AI+ NP EA+ R
Sbjct: 86 YKGAIEDFDTAIKLGINAPRIFLDRGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRA 145
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
++ LG ++ D + A++ PN RG++N K+++ A++D +K+DK +
Sbjct: 146 LSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNS 205
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+Y Y +G Y+ A + AI + N+++A
Sbjct: 206 IISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDA 242
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 102/215 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI ++ ++ + P+ RG ++ + + AI DF AI+ +A +
Sbjct: 50 GLYEDAIKDYNIAIELNNKDPKIYWQRGYIKSILIDYKGAIEDFDTAIKLGINAPRIFLD 109
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG ++ L + +AI D + A++ P A+ + R + + + + D + +KL+
Sbjct: 110 RGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRALSKIELGLYEDSNSDFNTAIKLNP 169
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AYT GL + Y +A + + A+++D+N + ++ + Q L E A++
Sbjct: 170 NYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIKDA 229
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + I + A++++ L L ++ + I DL+
Sbjct: 230 ENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDLN 264
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R ++++ G Y + S F+ +K +P Y A RG F + + A+ D+ A++ +
Sbjct: 144 RALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDK 203
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ +++ R Q + LG +AI+D A+ N D + + + K K + ++DL
Sbjct: 204 NSIISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDL 263
Query: 507 SACVKLD 513
+ K++
Sbjct: 264 NIVAKIN 270
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+ + N + AI+ F+ +K +P Y EA R ++ E + SDF AI+
Sbjct: 108 LDRGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRALSKIELGLYEDSNSDFNTAIKL 167
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG L +A++D AL+ + NS R + + + A++
Sbjct: 168 NPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIK 227
Query: 505 DLSACVKL 512
D + +
Sbjct: 228 DAENAINI 235
>gi|426255522|ref|XP_004021397.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Ovis
aries]
Length = 805
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G +A+K+
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNF 320
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 181 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 240
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 241 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 300
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 301 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 358
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 181 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 239
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 240 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 299
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 300 LQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 352
>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
Length = 1129
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 124/549 (22%), Positives = 230/549 (41%), Gaps = 71/549 (12%)
Query: 80 SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
S+L +K ++ D+A+ LD A+ K A + +GR E+++ +++ E A SA+
Sbjct: 480 SKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVA-PDSAE 538
Query: 140 L--KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKM-----SETSENH 192
+ + L L+EL + + C S+ +V+ LN + +M + S N+
Sbjct: 539 IWYNKGLLLDEL---GRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNLTSISANN 595
Query: 193 NKSDICDSSSQSRDV-SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVS 251
++I + + S S PD I+G ++++S
Sbjct: 596 KNTNINPQKAITGGFWSYLLSYKYASPD-------------------DNTEISGSIKDLS 636
Query: 252 E--NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
++ + G ST++ + E + S D + P+ + E+ D
Sbjct: 637 PEFGYDEAWYGKASTYSKLEMYE-DALHSYDMALAINPVRTEAWYEKGS--------ALD 687
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFC 369
KL +L E Y K+ D +SS++ W + TS++ R ++
Sbjct: 688 KLGRSEEAL-------ECYQKALDIDPQSSNA----------WYGMASTSSDLGRAEEAI 730
Query: 370 VTRISKSKSISVDFRLSRG--IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
K S D +G +A + G+Y A++ F+ +L+ +P EAL GR A A
Sbjct: 731 AYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALAR 790
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
EAA+ D+ ++ +P+ +A + LG EA + LE P + +I++
Sbjct: 791 SGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTYGEILEITPENREIMY 850
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G DF AA+ + LD +N A G ALS + +Y++A + KA++ D
Sbjct: 851 RQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYD 910
Query: 548 RNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+ AW +++ AN + ALEC + + + A++ +G L + LG
Sbjct: 911 PDNPAAW-----YFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVN 965
Query: 603 KAIKDLSSG 611
++I S
Sbjct: 966 ESINSYESA 974
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 350 FKWDMLKETSN-EAKRNKKFCVTRISKSKSI-------------SVDFRLSRGIAQVNEG 395
+++ +L E N A + K C+ R+ +++ + + S+G G
Sbjct: 289 YEFVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMG 348
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +AI +D+ L D G + + ++++ ++E + A + W +
Sbjct: 349 QYDAAIICYDRALNPDAGIEIQEAGDSLLESL-KVYDSSLPVYSEVPEFKSPAVKIWYDK 407
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG A++ +K LE EP+ A I +++G+ + AV +KLD
Sbjct: 408 GMAFDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSG 467
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ G S +G+YK A +++ +AI LD N+ AW + E ++ C
Sbjct: 468 YAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYD 527
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+VL + ++ ++ +GLLL LG++++A
Sbjct: 528 RVLEVAPDSAEIWYNKGLLLDELGRYQEA 556
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY +I+ +D ++ P+ E+ +G + AI+ + +++ ++ W ++
Sbjct: 111 KYEESIACYDMAIETFPVSSESWYKKGDEYLQTKNYIEAINCYEKSLATDNYLSRVWFQK 170
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG EA+ +++F NS+ L +G + +++ A+ + + + E
Sbjct: 171 ATASEKLGLDQEALTSYDTSIQFGTNSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 230
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH------LTQFYQD------ 563
+ + G+ G+Y+ A E + +AI L+ + +EAW + + YQD
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290
Query: 564 ----------------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
L +E+AL+C ++L ++A++ +G +L+ +GQ+
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350
Query: 602 KKAI 605
AI
Sbjct: 351 DAAI 354
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++D ++G A KY A++ +D+ L+ DP P A +G A
Sbjct: 868 CYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAI 927
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AA+ F + +Q P AW +G LG+ E+I ALE +P+S L+
Sbjct: 928 SSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSALYN 987
Query: 489 RGIVNFKFKDFNAAVEDLSAC-VKLD 513
+ +++ K+++ A S C KLD
Sbjct: 988 KRFSHYRIKEYDEA----SVCKAKLD 1009
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 3/232 (1%)
Query: 378 SISVDFRLSRGIAQVN---EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
S + F + G A+ EG+ A S D++L + P E L+ +G +E E +
Sbjct: 22 SFTSGFLPAAGAAEAQKNLEGEEVPAASTRDEVLSQRPSSVEGLLTKGNDLYSLKEYELS 81
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F +A++ P++ AW +G + +AL + E+I A+E P S++ +++G
Sbjct: 82 IGCFEKALEIEPNSSMAWYGKGCSLSALEKYEESIACYDMAIETFPVSSESWYKKGDEYL 141
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ K++ A+ + D + A +G ++A ++ +IQ N +A
Sbjct: 142 QTKNYIEAINCYEKSLATDNYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGTNSSKAL 201
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ Y L N E+A+ C + L + + ++ +G++ G ++ AI+
Sbjct: 202 QMQGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIE 253
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +GI G Y SAI +DQ + +P EA +G + A++ +
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ S P A +++G LG + EA+Q + L + P++ + + +G V +
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350
Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
+AA+ + L +K+ + Y+ + G+A
Sbjct: 351 DAAIICYDRALNPDAGIEIQEAGDSLLESLKVYDSSLPVYSEVPEFKSPAVKIWYDKGMA 410
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
++G Y+ A E + K ++ + + W L S +A+ C + L +D ++K
Sbjct: 411 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 470
Query: 587 AYHLRGLLLHGLGQHKKAIK 606
++ +G LG++K A+K
Sbjct: 471 VWYKKGYDSSKLGKYKDAVK 490
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 78/156 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +AI+ +D+IL DP +A+ +G A + + + A++ + +A++ +P AW
Sbjct: 860 GDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYF 919
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A+ + A++ +K ++ +P+ + +G + D N ++ + +++D
Sbjct: 920 KGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDP 979
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ SA + I EY +A K LD +F
Sbjct: 980 DSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPDF 1015
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 397 YASAISIFDQILKEDPMY--PEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAW 452
Y S++ ++ ++ P + P I AF E+A+ + + +++ P W
Sbjct: 383 YDSSLPVYSEV----PEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIW 438
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++G L +S EA+ KAL+ + A + +++G + K + AV+ + L
Sbjct: 439 YQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDL 498
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D+ A+ AL+ IG Y+ + + + +++ + E W + +L ++A +
Sbjct: 499 DENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIWYNKGLLLDELGRYQEASD 558
Query: 573 CLQQVLYIDKRFSKA 587
C Q L I+ +S A
Sbjct: 559 CYSQALQINSNYSVA 573
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 41/256 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A Y A++ F++ L P E +G + E+AI + +AI NP
Sbjct: 204 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 263
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
EAW +G E +E QD EF EP + L ++G+ + A
Sbjct: 264 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 319
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEY-------------------KKAEEAHLKA 543
++ + +N A+ G L+++G+Y ++A ++ L++
Sbjct: 320 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 379
Query: 544 IQLDRNFLEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
+++ + L + + +F + +L N E ALEC +VL + + ++
Sbjct: 380 LKVYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 439
Query: 590 LRGLLLHGLGQHKKAI 605
+GL L L + +A+
Sbjct: 440 QKGLNLDRLNKSAEAV 455
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G+ A+ +D+IL P EA +G+ + +AAI + A+ NP
Sbjct: 306 KGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRAL--NP 363
Query: 447 SAGEAWKRRGQARAALGESVE----AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
AG + G + L ES++ ++ S+ EF+ + I +++G+ ++ +A
Sbjct: 364 DAGIEIQEAGDS---LLESLKVYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESA 420
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + ++ + ++ + GL L + + +A + KA++LD + + W
Sbjct: 421 LECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSS 480
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + A++ + + +D+ ++ A++ + L +G+++ +I
Sbjct: 481 KLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSI 523
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ +++ +G+ K A A+ +D+ LK D Y + +G +
Sbjct: 423 CYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKL 482
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ + EAI + + AW + A A +G ++I + LE P+SA+I +
Sbjct: 483 GKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIWYN 542
Query: 489 RGIV----------------------NFKFKDF--NAAVEDLSA-CVKLDKENKSA---- 519
+G++ N+ F N +E LS + NK+
Sbjct: 543 KGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNLTSISANNKNTNINP 602
Query: 520 -YTYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
G S + YK A +K + + + EAW Y L E AL
Sbjct: 603 QKAITGGFWSYLLSYKYASPDDNTEISGSIKDLSPEFGYDEAWYGKASTYSKLEMYEDAL 662
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L I+ ++A++ +G L LG+ ++A++
Sbjct: 663 HSYDMALAINPVRTEAWYEKGSALDKLGRSEEALE 697
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+A YS+LE+++ + D AL ++P +A+ KG A LGR EEAL ++K
Sbjct: 648 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKA 702
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 3 KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
K LL+ R ++ T EI E+ + + +E ++ ++ AI D +
Sbjct: 818 KASLLEELGRYDEAASTYGEILEITPENREIMYRQGKALE-----AMGDFEAAIACYDKI 872
Query: 63 LA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
LA I I N+ F S++E ++ + DKAL+ DP A+ KGCA A+
Sbjct: 873 LALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAISSNNA 932
Query: 122 ALSVWEK 128
AL + K
Sbjct: 933 ALECFNK 939
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L + + I D+L++++S + A+ + LA L SL + +A+ + LL E ++
Sbjct: 723 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 780
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ RAF ++ + + D D ++LDPT +A K LGR +EA S +
Sbjct: 781 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTY 835
>gi|296472257|tpg|DAA14372.1| TPA: tetratricopeptide repeat domain 13 isoform 2 [Bos taurus]
Length = 805
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G +A+K+
Sbjct: 288 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNF 319
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 180 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 239
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 240 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 299
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 300 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 357
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 180 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 238
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 239 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 298
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 299 LQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 351
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 1/238 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A N G Y A++ FDQ LK P +A +G E A++ F +A++
Sbjct: 261 NKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNKGNTLVNLERYEEALAAFDQALKVK 320
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G LG EA+ +AL+ + + + +G K + A+
Sbjct: 321 PDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAA 380
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G AL +G Y++A A + +++ + +AW + DL
Sbjct: 381 FDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLG 440
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM-PHLIWN 622
E+AL Q L + +A++ +G+ L LG ++A+ + H WN
Sbjct: 441 RYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWN 498
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y A++ FDQ LK P +A +G A E A++ F +A++
Sbjct: 397 NKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVK 456
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ +P+ + +GI K A+
Sbjct: 457 PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 516
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G+AL +G ++A A+ KA+++ + EAW + +L
Sbjct: 517 FDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLG 576
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL Q L + + + +G++L LG +++A+
Sbjct: 577 CYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEAL 616
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA AI+ DQ LK P +A +G A E A++ F +A++ P +AW +
Sbjct: 237 EYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNK 296
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +AL+ +P+ + +G V K + A+ +K+ +
Sbjct: 297 GNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSD 356
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL +G Y++A A +A+++ + +AW + DL E+AL
Sbjct: 357 QHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFD 416
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM-PHLIWN 622
Q L + +A++ +G L LG++++A+ + H WN
Sbjct: 417 QTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWN 464
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G VN +Y A++ FDQ LK P +A +G E A++ F +A++
Sbjct: 295 NKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVK 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW +G A LG EAI +AL+ +P+ + +G + A+
Sbjct: 355 SDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAA 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G AL +G Y++A A +A+++ + +AW + L
Sbjct: 415 FDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLG 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM-PHLIWN 622
E+AL Q L + +A++ +G+ L LG ++A+ + H WN
Sbjct: 475 CDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWN 532
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ FDQ LK P +A +G A E A++ F + ++
Sbjct: 363 NKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVK 422
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ +P+ + +GI K A+
Sbjct: 423 PDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 482
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G+AL +G ++A A +A+++ + +AW + L
Sbjct: 483 FDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLG 542
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM-PHLIW 621
E+AL + L + +A+ +G L LG +++A+ + H +W
Sbjct: 543 RDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVW 599
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA G A++ FDQ LK +A +G A E A++ + +A++
Sbjct: 499 NKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVK 558
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAWK +G LG EA+ +AL+ +P+ + +GIV + A+
Sbjct: 559 PDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVA 618
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + ++ G+ L ++G Y++A A + +++ + E W + +L
Sbjct: 619 FDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLG 678
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ Q L + + ++ +G+ L LG++++A+
Sbjct: 679 RYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEAL 718
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA G+ A++ +++ LK P EA +G + A++ F +A++
Sbjct: 533 NKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK 592
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + WK +G LG EA+ +AL+ +PN + +GIV + A+
Sbjct: 593 PDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIA 652
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + + G+ L ++G Y++A A + +++ + E W + L
Sbjct: 653 FDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLG 712
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL Q L + + ++ +G+ L LG++++AI
Sbjct: 713 RYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAI 752
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A++ FDQ LK +A +G A E AI+ F +A++ P +AW
Sbjct: 338 GRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNN 397
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EA+ + L+ +P+ + +G + A+ +K+
Sbjct: 398 KGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKP 457
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL +G ++A A +A+++ + +AW + L E+AL
Sbjct: 458 DQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAF 517
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q L + +A++ +G+ L LG+ ++A+
Sbjct: 518 DQALKVKSDQHQAWNNKGIALGKLGRDEEAL 548
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G VN G Y A++ FDQ LK P + +G + A+ F +A++
Sbjct: 567 NKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVK 626
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E W +G LG EA+ + L+ +P+ ++ + +GIV + A+
Sbjct: 627 PNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITA 686
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + + G+AL +G Y++A A + +++ + E W + +L
Sbjct: 687 FDQTLKVKPDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLG 746
Query: 566 NSEKALECLQQVLYI----DKRF-SKA--YHLRGLLLHGLGQHKKAI 605
++A+ Q L + DK F +KA Y L+G + + ++AI
Sbjct: 747 RYQEAITAFDQTLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAI 793
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y A++ FDQ LK P +A +G A E A++ F +A++
Sbjct: 431 NKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVK 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ + + + +GI K A+
Sbjct: 491 PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAA 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ + A+ G L ++G Y++A A +A+++ + + W + +L
Sbjct: 551 YNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLG 610
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL Q L + + + +G++L LG++++A+
Sbjct: 611 CYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEAL 650
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI VN G+Y A+ FDQ LK P E +G + AI+ F + ++
Sbjct: 635 NKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVK 694
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W +G A LG EA+ + L+ +P+ ++ + +GI + A+
Sbjct: 695 PDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITA 754
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ + + G ++A +AI LD Y+DLA
Sbjct: 755 FDQTLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDPK-----------YRDLA 803
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
++ + +QQ +RF +G
Sbjct: 804 KTDSDFDAMQQA----ERFQALISFKG 826
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E AI+ +A++ P +AW+ +G A LG EA+ +AL+ +P+ +
Sbjct: 236 KEYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYN 295
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + + A+ +K+ ++ A+ G L +G Y++A A +A+++
Sbjct: 296 KGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKS 355
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +AW + L E+A+ Q L + +A++ +G L LG++++A+
Sbjct: 356 DQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAF 415
Query: 609 SSGSRTMMP--HLIWN 622
+ + P H WN
Sbjct: 416 DQ-TLKVKPDQHQAWN 430
>gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7]
gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
Length = 602
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 115/221 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A GKY AI FD+ L+ + Y E+ +G + E AI + +A++ +
Sbjct: 236 NKGYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEID 295
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G + + L EAI+ L KALE + + +++G + + + A E
Sbjct: 296 PKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASEC 355
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +++D +N+ + G AL+ + Y++A + +A++L+ N+ +A+ + L
Sbjct: 356 LDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLE 415
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+EC + L ID ++KA +G L LG++++A++
Sbjct: 416 RYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALE 456
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + S + F +G + +Y A D+ L+ D + +G A A
Sbjct: 321 CLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGL 380
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI+ + EA++ N + +A+K +G + A L EAI+ KALE + N
Sbjct: 381 ERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQN 440
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G F+ + A+E + +DK N+ A+ G AL + Y++A E KAI+LD
Sbjct: 441 KGNALFELGKYEEALECYDLVIAVDKSNEKAWADKGNALFELERYEEAIECFDKAIELDS 500
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N E W + L E+++EC + L +D + ++ +G + L +++A+K
Sbjct: 501 NDKEIWNNKGDTLYKLERYEESIECYDEALELDSEDEELWNNKGNIFFKLENYEEALK 558
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ G+ G + +I FD+ L+ +P EAL+ +G E E AI F +A++
Sbjct: 32 IDSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEI 91
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + W+ +G A L EAI+ K+LE + ++ + +G + + + A+E
Sbjct: 92 NSDYYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIE 151
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L ++ N T G L + Y++A E KA++ ++L AW L
Sbjct: 152 CLDIALETYPNNIYMLTDKGNTLYELERYEEAIECFDKALKY-VSYLNAWNDKGNTLCKL 210
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A++C + L ID + +G ++ LG+++KAI
Sbjct: 211 ERYSEAVQCYDKALEIDSSSYVLWGNKGYAIYELGKYEKAI 251
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ L+ DP +G + + E AI +A++ + + W ++
Sbjct: 280 RYEEAIECYDKALEIDPKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKK 339
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EA + L KALE + + + +G + + A+ ++L+
Sbjct: 340 GYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNN 399
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G +L+ + Y++A E + KA+++D N+ +A + +L E+ALEC
Sbjct: 400 YSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYD 459
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
V+ +DK KA+ +G L L ++++AI+
Sbjct: 460 LVIAVDKSNEKAWADKGNALFELERYEEAIE 490
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + S + F ++G A +Y AI+ +D+ L+ + Y +A +G + A
Sbjct: 355 CLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGL 414
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI + +A++ + + +A + +G A LG+ EA++ + + ++ +
Sbjct: 415 ERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWAD 474
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G F+ + + A+E ++LD +K + G L + Y+++ E + +A++LD
Sbjct: 475 KGNALFELERYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERYEESIECYDEALELDS 534
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
E W + + L N E+AL+C + L I+ F A
Sbjct: 535 EDEELWNNKGNIFFKLENYEEALKCYDRALEINTNFELA 573
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI FD+ LK Y A +G A+ + +A++ + S+ W +
Sbjct: 179 RYEEAIECFDKALKY-VSYLNAWNDKGNTLCKLERYSEAVQCYDKALEIDSSSYVLWGNK 237
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG+ +AI ++LE + + + +G ++ + + A+E +++D +
Sbjct: 238 GYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEIDPK 297
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N+ + G +LS++ Y++A E KA+++D + W +L E+A ECL
Sbjct: 298 NEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLD 357
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L ID + K ++ +G L GL ++++AI
Sbjct: 358 KALEIDSKNEKFWNNKGYALAGLERYEEAI 387
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ F +F ++E ++++ N A G L +I E +KA E KA++++ +
Sbjct: 35 GLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEINSD 94
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + W + DL E+A+EC + L I + + Y+++G L+GL ++++AI+ L
Sbjct: 95 YYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIECLD 154
Query: 610 SGSRTMMPHLIWNLT 624
T P+ I+ LT
Sbjct: 155 IALET-YPNNIYMLT 168
>gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 385
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 114/234 (48%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+I+++ S + L++G++ + G YA A+ +DQ ++ + +A +GRG A +
Sbjct: 47 QIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKY 106
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A++ F +A + +PS AW G A G+ +A+ +AL+ PNS RGI
Sbjct: 107 PEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNSDWAWFHRGI 166
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+E V++D + + A+ G L + Y +AE + + ++++ N
Sbjct: 167 TLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNSE 226
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W ++ + AL+ ++VL I+ + A++ +G++L L AI
Sbjct: 227 PGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAI 280
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEP 480
GT + ELE I PS W +G + G EA++ +A+E
Sbjct: 34 GTPNPYMLELE------NPQIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEING 87
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
SAD RG + + + AV + +LD A+ LG+AL G+ + A A+
Sbjct: 88 ESADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAY 147
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A++++ N AW H L ++ALE Q + ID + +A+ RG +L L +
Sbjct: 148 DQALKVNPNSDWAWFHRGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELER 207
Query: 601 HKKA 604
+ +A
Sbjct: 208 YPEA 211
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ K ++ AV+ ++++ E+ A+ G AL + +Y +A A +A +LD
Sbjct: 62 KGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELDP 121
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + AW L D E AL Q L ++ A+ RG+ L L + ++A++
Sbjct: 122 SLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNSDWAWFHRGITLGRLERDQEALEAY 181
Query: 609 SSGSR 613
R
Sbjct: 182 DQAVR 186
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 35/202 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + A+ +DQ ++ DP Y A RG A + F E ++ NP
Sbjct: 164 RGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERYPEAETSFAEVVRINP 223
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-------------- 492
++ W RG A + ++ A++ + L P +A+ + +GI+
Sbjct: 224 NSEPGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAIFTV 283
Query: 493 ------------NFKFKDFNA---------AVEDLSACVKLDKENKSAYTYLGLALSSIG 531
FK NA A+ ++L+ +++ + G+AL+ +
Sbjct: 284 FDRVVQLIPDDAGGWFKRGNALLRLDRYADALNSYDRMLELEPDSEVGWYNRGIALALLE 343
Query: 532 EYKKAEEAHLKAIQLDRNFLEA 553
Y A + +A++++ N EA
Sbjct: 344 RYHDAIASFDEALRINPNNTEA 365
>gi|427716718|ref|YP_007064712.1| hypothetical protein Cal7507_1412 [Calothrix sp. PCC 7507]
gi|427349154|gb|AFY31878.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 1313
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G AI+ +DQ ++ P E RG + AI+ + +A+ P
Sbjct: 414 QGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFHLEQFTEAIASYDQAVALKP 473
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG+ AI +A+ +P+S++ +G+ K A+
Sbjct: 474 DFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAY 533
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL+ ++++A ++ KA+++ ++ E W +L
Sbjct: 534 DQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKR 593
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIW 621
+A+ L I F A++ RG+ L LGQ ++AI D + + P HL W
Sbjct: 594 WSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAI-DSYRKAIAIKPDFHLAW 649
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 107/229 (46%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S ++ +RG+ + ++ AI+ +DQ + P + +A RG + EAAI+
Sbjct: 438 KPHSDEYWFNRGLTLFHLEQFTEAIASYDQAVALKPDFYKAWYNRGGILGELGQFEAAIA 497
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F +AI P + E+W +G A LG+ EAI +AL +P + + RGI
Sbjct: 498 SFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYYRGIALAVS 557
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+ +++ + + G+ L ++ + +A + A+ + +F AW +
Sbjct: 558 EQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADFYLAWYN 617
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A++ ++ + I F A++ + + L LG+ +AI
Sbjct: 618 RGIALDNLGQREEAIDSYRKAIAIKPDFHLAWYNQAVALFYLGRFAEAI 666
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ +AI+ F+Q + P E+ +G A +L AI+ + +A+ P E W
Sbjct: 490 GQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYY 549
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI KALE +P+ ++ +RG+V F K ++ A+ + +
Sbjct: 550 RGIALAVSEQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQA 609
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLTQFYQDLANS 567
+ A+ G+AL ++G+ ++A +++ KAI + +F AW +L +F + +A+
Sbjct: 610 DFYLAWYNRGIALDNLGQREEAIDSYRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASY 669
Query: 568 EKALEC 573
++AL+
Sbjct: 670 DRALQI 675
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A + G+ AI+ +DQ L P E RG A A + E AI+ + +A++
Sbjct: 515 SKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQ 574
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG L EAI AL + + + RGI A++
Sbjct: 575 PDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAIDS 634
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + A+ +AL +G + +A ++ +A+Q+ ++ EAW
Sbjct: 635 YRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASYDRALQIKLDYWEAW 683
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
++L +G +A +L AI+ + +AI+ P + E W RG L + EAI +A
Sbjct: 409 QSLFYQGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFHLEQFTEAIASYDQA 468
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P+ + RG + + F AA+ + + ++ ++ GLAL +G+ +
Sbjct: 469 VALKPDFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWE 528
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A A+ +A+ L E W +Y+ +A E+A+ + L I + + +
Sbjct: 529 AIAAYDQALVLQPEDQENW-----YYRGIALAVSEQHEEAIASYDKALEIQPDYHEVWID 583
Query: 591 RGLLLHGLGQHKKAI 605
RG++L L + +AI
Sbjct: 584 RGVVLFNLKRWSEAI 598
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 11/182 (6%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +A G+ + AI +A+E +P+S + RG+ F + F A+ V L
Sbjct: 414 QGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFHLEQFTEAIASYDQAVALKP 473
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G L +G+++ A + +AI + + E+W L +A+
Sbjct: 474 DFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAY 533
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIW--------NLT 624
Q L + + ++ RG+ L QH++AI + + P H +W NL
Sbjct: 534 DQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDK-ALEIQPDYHEVWIDRGVVLFNLK 592
Query: 625 RW 626
RW
Sbjct: 593 RW 594
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 13/192 (6%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + RG+ N +++ AI+ +D L + A RG A
Sbjct: 563 AIASYDKALEIQPDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADFYLAWYNRGIAL 622
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E AI + +AI P AW + A LG EAI +AL+ + + +
Sbjct: 623 DNLGQREEAIDSYRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASYDRALQIKLDYWEA 682
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG +DLS+ + A G A I Y++ LK ++
Sbjct: 683 WIGRGTAAGNL----VHTDDLSSLLTTVTATNPALKLSGYA-GKIASYEEG----LKHVR 733
Query: 546 LDRNFLEAWGHL 557
D + E WG L
Sbjct: 734 PDTH-PEGWGRL 744
>gi|300867449|ref|ZP_07112103.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
gi|300334564|emb|CBN57271.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
Length = 715
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA A++ +DQ L E RG + AI+ + +AI N E W R
Sbjct: 471 RYAEAVASYDQALTIRADRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNR 530
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L + EAI +A+ +PN +I H RG+ + ++ A+ + + +
Sbjct: 531 GAVLGKLQQYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQ 590
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G + + EY++A A+ +AI + +AW H + +L E+A+ C
Sbjct: 591 CYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPESYDAWRHRGTAFSELKQYEEAMICYD 650
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + I ++A+ RG LL L Q +A+ LS
Sbjct: 651 KAIAIKPDNAQAWRDRGALLSELKQDSEAVASLSQA 686
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ AI+ +D+ + + E RG ++ E AI+ + AI P+ E W R
Sbjct: 505 RYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASYDRAIALQPNDHEIWHNR 564
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L E VEAI +A+ +P + +G K +++ A+ + + E
Sbjct: 565 GVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPE 624
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ + G A S + +Y++A + KAI + + +AW +L +A+ L
Sbjct: 625 SYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQDSEAVASLS 684
Query: 576 QVLYIDK 582
Q + I +
Sbjct: 685 QAISIQQ 691
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +Y AI+ ++Q + P EA G+G A +E E AI+ + AI
Sbjct: 563 NRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIK 622
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +AW+ RG A + L + EA+ KA+ +P++A +RG + + K + AV
Sbjct: 623 PESYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQDSEAVAS 682
Query: 506 LSACVKLDK 514
LS + + +
Sbjct: 683 LSQAISIQQ 691
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +++ L PE R + A++ + +A+ E W R
Sbjct: 437 RYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEAVASYDQALTIRADRYETWYNR 496
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L +AI KA+ + ++ + RG V K + + A+ + L
Sbjct: 497 GNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASYDRAIALQPN 556
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+A + EY +A ++ +AI + EAW + + L E+A+
Sbjct: 557 DHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYD 616
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + I A+ RG L Q+++A+
Sbjct: 617 RAIAIKPESYDAWRHRGTAFSELKQYEEAM 646
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ + P E RG A E AI+ + +AI P EAW +
Sbjct: 539 QYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGK 598
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ A L E EAI +A+ +P S D RG + K + A+ + + +
Sbjct: 599 GETFAKLQEYEEAIAAYDRAIAIKPESYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPD 658
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
N A+ G LS + + +A + +AI + +N
Sbjct: 659 NAQAWRDRGALLSELKQDSEAVASLSQAISIQQN 692
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 114/312 (36%), Gaps = 46/312 (14%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E+ EA ++ V +S+ D + +G A EG+Y A+ F++ + + E
Sbjct: 296 ESQLEANNSRSNVVPFQKPQESLIADDYVKQGEALYLEGRYQEALVSFEKAILMNADIDE 355
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA------------------ 458
A RG + LE AI+ + +AI N EAW RG
Sbjct: 356 AWYNRGNVLVKVQRLEEAIACYDQAIGLNREYYEAWYNRGNVLMRLQRYEEAAAAYDQAI 415
Query: 459 ------------RAA----LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
RAA L EAI KAL + + ++ H R + K + + A
Sbjct: 416 ALKPEEYGPWHNRAAAMGRLQRYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEA 475
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
V + + + + G L + Y A ++ KAI L+ + E W +
Sbjct: 476 VASYDQALTIRADRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLG 535
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWN 622
L E+A+ + + + + +H RG+ L ++ +AI + P
Sbjct: 536 KLQQYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAI-AIQPQ---- 590
Query: 623 LTRWRNLCFNAW 634
C+ AW
Sbjct: 591 -------CYEAW 595
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 80/185 (43%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A + + AI+ + +A+ E W R L EA+ +AL
Sbjct: 428 RAAAMGRLQRYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEAVASYDQALTIRA 487
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RG + ++ + ++ A+ + L+ + + G L + +Y++A ++
Sbjct: 488 DRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASY 547
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI L N E W + + L+ +A+ +Q + I + +A+ +G L +
Sbjct: 548 DRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQE 607
Query: 601 HKKAI 605
+++AI
Sbjct: 608 YEEAI 612
>gi|113475613|ref|YP_721674.1| hypothetical protein Tery_1947 [Trichodesmium erythraeum IMS101]
gi|110166661|gb|ABG51201.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 564
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 9/228 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ N +Y AI+ FD+ +K +P ++ + + ++ AI + EA++
Sbjct: 111 SYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIYCYKEALKIQ 170
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P GE W +GQA + + EA+ A + +P++ DI +RG+ F+ + + AV
Sbjct: 171 PMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQTQRYAEAVIS 230
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L EN + LG+A S + +Y A + KAI+L+ + EAW +Y+ LA
Sbjct: 231 YGHAIELQPENYLGWFNLGIAQSKLHKYHDAVSSFNKAIKLNPDDYEAW-----YYKGLA 285
Query: 566 ----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E + CL + + + + + RG +L L ++++A++ +
Sbjct: 286 LKNHWKEGGVACLDKAINFNPNLPEIWISRGYILLDLFKYREALESFN 333
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+K + + D RG+A +YA A+ + ++ P G A++ +
Sbjct: 201 AKLQPDNYDIWFKRGLALFQTQRYAEAVISYGHAIELQPENYLGWFNLGIAQSKLHKYHD 260
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+S F +AI+ NP EAW +G A + + L KA+ F PN +I RG +
Sbjct: 261 AVSSFNKAIKLNPDDYEAWYYKGLALKNHWKE-GGVACLDKAINFNPNLPEIWISRGYIL 319
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+E + + ++ ++ G A ++G+Y +A A+ A+ ++ FLEA
Sbjct: 320 LDLFKYREALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEA 379
Query: 554 WGHLTQFYQDLANSEKALECLQQVL 578
W + + + N ++AL +V+
Sbjct: 380 WNCRGEALERVQNYDQALAAYDKVI 404
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+ +SRG ++ KY A+ F++ + + YPE+ +GRG A + A+ + A
Sbjct: 310 EIWISRGYILLDLFKYREALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNA 369
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE--FEP--NSADILHERGIVNFKFK 497
+ P EAW RG+A + +A+ K ++ FE + A + +RG K +
Sbjct: 370 VSIEPYFLEAWNCRGEALERVQNYDQALAAYDKVIKMSFEQGVSVAKVGLQRGAALEKLE 429
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+E + ++ N + GL L + Y++A ++ +AI + + +AW L
Sbjct: 430 RYPEAIEAYNLVIEKQPNNFDGWLNRGLNLEKMANYEEAVLSYSRAISIWPSNYQAWLQL 489
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L ++A+ +++ + + + RGL+L LG ++A+
Sbjct: 490 ALMLEKLERLDEAIVAYNKIISLRPGNHETWLKRGLILERLGYVQEAV 537
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++RG ++ + +A+ VK+ + + L ALS + +Y++A EA+ +++ L
Sbjct: 42 YDRGNRLYEMGRYESAIPYYENAVKIKPDWAIGWLKLAEALSKLQKYEQAVEAYKRSLSL 101
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+N +AW +L E+A+ C + + I+ +++ + ++L L Q AI
Sbjct: 102 KQNAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAI 160
>gi|291402200|ref|XP_002717430.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 2
[Oryctolagus cuniculus]
Length = 812
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 176 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 234
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 235 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 294
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +++ + LRG++L+ G ++A+K+
Sbjct: 295 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 326
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 187 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFF 246
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 247 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 306
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 307 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 364
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 187 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTF 245
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 246 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 305
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 306 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 358
>gi|148558498|ref|YP_001257882.1| hypothetical protein BOV_A0905 [Brucella ovis ATCC 25840]
gi|148369783|gb|ABQ62655.1| TPR domain protein [Brucella ovis ATCC 25840]
Length = 295
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ + + ++ +P Y A IGRG L+ A++DF +AI + G A+ RG
Sbjct: 133 AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIY 192
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G +AI+D SKA+ + + + RGI D++ A +D + + LD+ +
Sbjct: 193 QAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAES 252
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WG 555
+ L G+ KA ++ +A+QLD + A WG
Sbjct: 253 WANQALVYEHNGDKAKAANSYARAVQLDPKYKPAKDGLARTWG 295
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 206
>gi|300864617|ref|ZP_07109475.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
gi|300337366|emb|CBN54623.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
Length = 561
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 4/237 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ K + + + RG+A + +YA ++S +D+ ++ P +A RG A
Sbjct: 191 RVVKLQPGNAEAWFYRGLALMKALRYAESVSSYDRAVQLQPENYQAWFNRGIALEKLHRY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A++ + IQ P EAW +G A L AI L++A++ PN ++ G
Sbjct: 251 AEAVNSYDRVIQLQPGDSEAWFYKGMALKHLRPDA-AIATLNQAIKINPNFPELWIGFGQ 309
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + + A+ +L+ A+ GLAL+ + Y++A A+ A+QL +FL
Sbjct: 310 VLSEAGHWEGAIASFDKATQLNPNFPEAWLGRGLALAGMEHYREAIIAYSNALQLKGDFL 369
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAI 605
EAW + + + L E+A+ C +V+ + SK RG L L ++ +AI
Sbjct: 370 EAWNYRGEALEKLHRYEEAIACFDKVIAMTSELDISSKVGFQRGAALEKLERYAEAI 426
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 9/249 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R K S + RG A ++ +Y A+ F+Q + P EA RG A
Sbjct: 86 CCDRAIGIKPESYKAWVLRGSALLSLHQYQEALVSFEQATQIQPQNYEAWHYRGRALEEL 145
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A + + +AI+ P+ W R+G EA+ + ++ +P +A+
Sbjct: 146 HQYQTAAACYRKAIEIKPNLPTIWYRQGCTLLHGDRYAEAVAAFERVVKLQPGNAEAWFY 205
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ K + +V V+L EN A+ G+AL + Y +A ++ + IQL
Sbjct: 206 RGLALMKALRYAESVSSYDRAVQLQPENYQAWFNRGIALEKLHRYAEAVNSYDRVIQLQP 265
Query: 549 NFLEAWGHLTQFYQDLA----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
EAW FY+ +A + A+ L Q + I+ F + + G +L G + A
Sbjct: 266 GDSEAW-----FYKGMALKHLRPDAAIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGA 320
Query: 605 IKDLSSGSR 613
I ++
Sbjct: 321 IASFDKATQ 329
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y + D+ + P +A + RG+A + + A+ F +A Q P EAW R
Sbjct: 79 RYDVVVVCCDRAIGIKPESYKAWVLRGSALLSLHQYQEALVSFEQATQIQPQNYEAWHYR 138
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A L + A KA+E +PN I + +G + AV VKL
Sbjct: 139 GRALEELHQYQTAAACYRKAIEIKPNLPTIWYRQGCTLLHGDRYAEAVAAFERVVKLQPG 198
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A+ Y GLAL Y ++ ++ +A+QL +AW + + L +A+
Sbjct: 199 NAEAWFYRGLALMKALRYAESVSSYDRAVQLQPENYQAWFNRGIALEKLHRYAEAVNSYD 258
Query: 576 QVLYIDKRFSKAYHLRGLLLHGL 598
+V+ + S+A+ +G+ L L
Sbjct: 259 RVIQLQPGDSEAWFYKGMALKHL 281
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ +Q +K +P +PE IG G + E AI+ F +A Q NP+ EAW RG A
Sbjct: 285 AAIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGAIASFDKATQLNPNFPEAWLGRGLA 344
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV----KLDK 514
A + EAI S AL+ + + + + RG K + A+ + +LD
Sbjct: 345 LAGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALEKLHRYEEAIACFDKVIAMTSELDI 404
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+K + G AL + Y +A A+ + + L + EAW
Sbjct: 405 SSKVGFQ-RGAALEKLERYAEAIAAYDQVLLLQPDNFEAW 443
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V ++ IS RG A +YA AI+ +DQ+L P EA + RG A A +
Sbjct: 395 VIAMTSELDISSKVGFQRGAALEKLERYAEAIAAYDQVLLLQPDNFEAWLKRGNALALMQ 454
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A+ + + I P + W +RG+ A L EAI K ++ +P++ + +R
Sbjct: 455 RYEDALIAYNQGIAIWPDNYQVWLQRGKNLAKLERCQEAIAAFDKVIQLKPDNCEAWLKR 514
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G V K + F A+ +++ + A
Sbjct: 515 GDVLQKLQRFQDAISSYGVALEIQPDYYEA 544
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 40/259 (15%)
Query: 369 CVTRISKSKSISVDF-RLSRGIAQV--NEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++++ I+ +F L G QV G + AI+ FD+ + +P +PEA +GRG A
Sbjct: 286 AIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGAIASFDKATQLNPNFPEAWLGRGLAL 345
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---S 482
A AI ++ A+Q EAW RG+A L EAI K + S
Sbjct: 346 AGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALEKLHRYEEAIACFDKVIAMTSELDIS 405
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY--------- 533
+ + +RG K + + A+ + L +N A+ G AL+ + Y
Sbjct: 406 SKVGFQRGAALEKLERYAEAIAAYDQVLLLQPDNFEAWLKRGNALALMQRYEDALIAYNQ 465
Query: 534 -------------------------KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++A A K IQL + EAW Q L +
Sbjct: 466 GIAIWPDNYQVWLQRGKNLAKLERCQEAIAAFDKVIQLKPDNCEAWLKRGDVLQKLQRFQ 525
Query: 569 KALECLQQVLYIDKRFSKA 587
A+ L I + +A
Sbjct: 526 DAISSYGVALEIQPDYYEA 544
>gi|427732169|ref|YP_007078406.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
gi|427368088|gb|AFY50809.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
Length = 1273
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 17/269 (6%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+ N+ ++ S + ++ +G+ Q G A AI+ ++Q ++ +P E R
Sbjct: 347 GQMNQPPSMSAESSNVLVTAQAWFYQGLQQAKSGDLAGAIASYNQAIQINPNSSEYWFNR 406
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AI+ + +A+ P +AW RG LG EAI ++A+ +
Sbjct: 407 GLTLFHLENFTEAIASYDQALHLKPDYYKAWYNRGGTLGQLGLFEEAIASFNQAIAIHAD 466
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ ++ +G K A+ + L+ + + Y G+AL+ +Y++A ++
Sbjct: 467 NPEVWSSKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQYQQAIASYD 526
Query: 542 KAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A+++ +F EAW +L Q+ + +A+ +KAL F A++ RG+
Sbjct: 527 RALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALAS-------QPDFYLAWYNRGVA 579
Query: 595 LHGLGQHKKAIKDLSSGSRTMMP--HLIW 621
L LG+ K+AI + + P HL W
Sbjct: 580 LDNLGRRKEAIASYQRAIK-IKPDFHLAW 607
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S ++ +RG+ + + AI+ +DQ L P Y +A RG E AI+ F
Sbjct: 399 SSEYWFNRGLTLFHLENFTEAIASYDQALHLKPDYYKAWYNRGGTLGQLGLFEEAIASFN 458
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI + E W +G A LG+ EAI +AL EP + + RGI + +
Sbjct: 459 QAIAIHADNPEVWSSKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQY 518
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ +++ + A+ G+ L ++ ++ +A + KA+ +F AW +
Sbjct: 519 QQAIASYDRALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGV 578
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++A+ Q+ + I F A++ + + L L ++ +AI
Sbjct: 579 ALDNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAI 624
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A++ G+ AI+ +DQ L +P PE RG A A + + AI+ + A++
Sbjct: 473 SKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQYQQAIASYDRALEIQ 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L + EAI KAL +P+ + RG+ A+
Sbjct: 533 PDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGVALDNLGRRKEAIAS 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+K+ + A+ +AL + Y +A ++ A+Q+ ++ EAW
Sbjct: 593 YQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWEAW 641
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF + RG+ N +++ AI+ +D+ L P + A RG A
Sbjct: 521 AIASYDRALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGVAL 580
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+ + AI+ P AW + A L +EAI AL+ + + +
Sbjct: 581 DNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWEA 640
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + N + L + ++ + + TY G I Y++ LK I+
Sbjct: 641 WIGRGTAAGQIDSDNLS---LLTTIVINNQALNQGTYTG----KIASYEEG----LKYIR 689
Query: 546 LDRNFLEAWGHL 557
D + E WG L
Sbjct: 690 PDTH-PEGWGRL 700
>gi|126347672|emb|CAJ89386.1| putative TPR repeat protein [Streptomyces ambofaciens ATCC 23877]
Length = 1035
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 2/247 (0%)
Query: 380 SVDFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
S D+ LS RG A G+Y A++ F L DP Y AL RG A + A++D
Sbjct: 589 SYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYGWALASRGQAHLQAGRYDQAVADL 648
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T A+ NP+ +RG A G +A+ DL+ AL+ P SA +L +RG +
Sbjct: 649 TAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAALDLAPASAGLLGQRGEAHLMAGR 708
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ AV DL+A L+ + G A G Y A A+ +D + A
Sbjct: 709 YEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDPAYDWALASRG 768
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
++ ++A+ L L ID A RG G++ +A+ DL++ + + P
Sbjct: 769 AAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTA-ALAITPA 827
Query: 619 LIWNLTR 625
W L +
Sbjct: 828 YPWALAQ 834
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A + G+Y A++ + +P Y AL RG A + A++DFT A+ +
Sbjct: 562 SRGQAHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAID 621
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ G A RGQA G +A+ DL+ AL+ P +L +RG + ++ AV D
Sbjct: 622 PAYGWALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTD 681
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQD 563
L+A + L + G A G Y++A A L A D N + W G ++
Sbjct: 682 LTAALDLAPASAGLLGQRGEAHLMAGRYEQA-VADLTAAH-DLNPTDDWVLGQRGAAHRL 739
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A+ L ID + A RG ++ +A+ DL++
Sbjct: 740 AGRYDDAVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTA 786
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A++ F L DP Y AL RG A + A++D T A+ +P
Sbjct: 733 RGAAHRLAGRYDDAVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDP 792
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A +RG A G +A+ DL+ AL P L +RG + + AV D
Sbjct: 793 ANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAYPWALAQRGESHRLAGRYEQAVTDF 852
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+A + L+ + A G A G Y++A
Sbjct: 853 TAALDLNPTDDWALASRGQAHQLAGRYEQA 882
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 369 CVTRISKSKSISV--DFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
VT ++ + +I D+ L+ RG A G+Y A++ L P YP AL RG +
Sbjct: 780 AVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAYPWALAQRGESH 839
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++DFT A+ NP+ A RGQA G +A+ D + A++ P A
Sbjct: 840 RLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWP 899
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L RG + + + A DL V + E+
Sbjct: 900 LGMRGRAHRQAGHYARARADLERAVAWEPED 930
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G+Y AI+ L +P AL RG A + A++D T AI SN
Sbjct: 528 SRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQAHLQAGRYDQAVADLTAAIDSN 587
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A +RG+A G +A+ D + AL +P L RG + + ++ AV D
Sbjct: 588 PSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYGWALASRGQAHLQAGRYDQAVAD 647
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
L+A + L+ + G A G Y A
Sbjct: 648 LTAALDLNPTDDWVLGQRGAAHRLAGRYDDA 678
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G+Y A++ +P L RG A + A++DFT A+ +P
Sbjct: 699 RGEAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDP 758
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG A +A+ DL+ AL +P + L +RG + ++ AV DL
Sbjct: 759 AYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDL 818
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A + + A G + G Y++A A+ L+ A Q +Q
Sbjct: 819 TAALAITPAYPWALAQRGESHRLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGR 878
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+A+ + I + +RG G + +A DL
Sbjct: 879 YEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGHYARARADL 920
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
Query: 369 CVTRISKSKSI--SVDFRL-SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
VT + + +I + D+ L SRG A +Y A++ L DP AL RG A
Sbjct: 746 AVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAH 805
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A++D T A+ P+ A +RG++ G +A+ D + AL+ P
Sbjct: 806 RLAGRYDQAVTDLTAALAITPAYPWALAQRGESHRLAGRYEQAVTDFTAALDLNPTDDWA 865
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
L RG + + AV D +A V + G A G Y +A
Sbjct: 866 LASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGHYARA 916
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+++F AI + AW RG+ LG +AI DL+ AL+ P L RG
Sbjct: 506 EEALTEFDRAIGYDARNAHAWGSRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQ 565
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + ++ AV DL+A + + A + G A G Y +A A+ +D +
Sbjct: 566 AHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYG 625
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A Q + ++A+ L L ++ RG G++ A+ DL++
Sbjct: 626 WALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTA 684
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ FD+ + D A RG + + AI+D T A+ NP A RGQA
Sbjct: 508 ALTEFDRAIGYDARNAHAWGSRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQAH 567
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +A+ DL+ A++ P+ L +RG + ++ AV D +A + +D A
Sbjct: 568 LQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDP----A 623
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
Y G AL+S G +AHL+A + D+
Sbjct: 624 Y---GWALASRG------QAHLQAGRYDQ 643
>gi|367475911|ref|ZP_09475338.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
gi|365271774|emb|CCD87806.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
Length = 476
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 5/205 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP EA RG QR L+ A++D+ +AI+ P +A+ RG A G++ +A+Q
Sbjct: 151 DPNDAEAYELRGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQ 210
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++A+ +P+ R K + A+ D ++ D + Y GL +++
Sbjct: 211 DYNEAIRLDPDRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAM 270
Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
EY KA + +AI+L NFL G QF +L + AL L +D F+ Y
Sbjct: 271 KEYDKAIADYDQAIKLQPKPNFLTNRGDSYQFKGELGS---ALSDYDAALRLDPNFALTY 327
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGSR 613
+ R +L +G+ KA+ D + R
Sbjct: 328 NNRAVLFRKMGERAKALADYEAALR 352
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + + A++ +DQ ++ P Y +A RG A + + E A+ D+ EAI+ +P
Sbjct: 161 RGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDP 220
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ R A LG+ +A+ D +A+ +P + RG+ K+++ A+ D
Sbjct: 221 DRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADY 280
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL + + T G + GE A + A++LD NF + + ++ +
Sbjct: 281 DQAIKL-QPKPNFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGE 339
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
KAL + L +D A R ++L
Sbjct: 340 RAKALADYEAALRLDPGNDNAASGRRVML 368
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ A+ D AI + A++ RG R A G++ +A DLS A+ +PN A+ R
Sbjct: 102 MSQALKDLDRAIALDGKNARAYRLRGDFMREAGGDAGKAAADLSMAISLDPNDAEAYELR 161
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V + + + A+ D ++L + AY G+A G+ +KA + + +AI+LD +
Sbjct: 162 GVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPD 221
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + Y+ L +KAL + + D + + Y RGL + ++ KAI D
Sbjct: 222 RPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIAD 279
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A G+ A++ + ++ DP PE RG A +E + AI+D+ +AI+
Sbjct: 228 NRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADYDQAIKLQ 287
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P RG + GE A+ D AL +PN A + R ++ K + A+ D
Sbjct: 288 PKP-NFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGERAKALAD 346
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEY 533
A ++LD N +A + + L+ I ++
Sbjct: 347 YEAALRLDPGNDNAASGRRVMLAEIKKF 374
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y AI+ +DQ +K P P L RG + F+ EL +A+SD+ A++ +
Sbjct: 262 NRGLTYAAMKEYDKAIADYDQAIKLQPK-PNFLTNRGDSYQFKGELGSALSDYDAALRLD 320
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ + R +GE +A+ D AL +P + + R ++ + K F A
Sbjct: 321 PNFALTYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKFGA 376
>gi|406831287|ref|ZP_11090881.1| peptidase C14 caspase catalytic subunit p20 [Schlesneria paludicola
DSM 18645]
Length = 423
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 34/273 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I S+ + + RG AQ G Y +AI+ F Q ++ +P +A RG A ++ + +
Sbjct: 22 IGYSQYHTAESHYKRGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDED 81
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+TEAI+ +P +A+ R A + A+ D + L ++P + + + RG++
Sbjct: 82 LAIDDYTEAIRIDPEYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVI 141
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS----------------------- 529
+ + + A+ D + V++D+ + Y+ G A
Sbjct: 142 RLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQPNDWL 201
Query: 530 -----------IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+GE++ A + +AI+LD + + + Y L + A L + +
Sbjct: 202 SYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEIDLSEAV 261
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+D +FS Y+ R L G AI+D +
Sbjct: 262 RVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEA 294
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ + + + AI+ FD +++ D + RG A L+AA +D+TEAI+
Sbjct: 137 SRGVIRLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQ 196
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ ++ RG R +GE AI+D S+A+ +P + RG ++ ++A D
Sbjct: 197 PNDWLSYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEID 256
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS V++D + Y G++ A + +A+ LD W L L
Sbjct: 257 LSEAVRVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLDPKNWLFWSRLAWLRATLP 316
Query: 566 NSEKALE 572
+ E
Sbjct: 317 GDDSVYE 323
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RGTA+ + + EAAI++FT+AI+S P +A+ RG A G+ AI D ++A+ +P
Sbjct: 36 RGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDEDLAIDDYTEAIRIDP 95
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A R F FN AV D ++ ++ D +N AY G+ E A
Sbjct: 96 EYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVIRLEQNEMSDAIADF 155
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+++DR + + L + A + + +Y RG + +G+
Sbjct: 156 DSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQPNDWLSYFNRGNVRQLVGE 215
Query: 601 HKKAIKDLSSGSRTMMPHLI 620
+ AI+D S R + P L+
Sbjct: 216 FRVAIRDYSRAIR-LDPQLV 234
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
++A+ ++RG + D+ AA+ + + ++ + +N AY G+A G+ A + +
Sbjct: 28 HTAESHYKRGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDEDLAIDDY 87
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI++D + +A+ + D A+ L D + +AY+ RG++ +
Sbjct: 88 TEAIRIDPEYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVIRLEQNE 147
Query: 601 HKKAIKDLSSGSRTMMPH 618
AI D S R H
Sbjct: 148 MSDAIADFDSVVRIDRTH 165
>gi|425439939|ref|ZP_18820251.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719739|emb|CCH96479.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 490
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + + KY AI+ FD + P + +AL+ RG A +LE AI+D+T+A+ +
Sbjct: 46 QGKQKYEQRKYKEAIASFDGAILLKPDFIQALVYRGLAYKKLGKLEEAINDYTQALALSA 105
Query: 447 SAGEAWK----RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ RG A + + ++ E+I D + A++F A+ ++RG + + + AA
Sbjct: 106 KDQKMQSLIHYNRGLAYSDIRKTQESIDDFTLAIQFNSQDAEAYYQRGFILAEKSNIQAA 165
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSS-IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ D S + LD+ SAY G+ L+ +G A +KA++ + + + +
Sbjct: 166 ISDFSKAISLDRSYLSAYAQRGITLNGYLGNLPAATSDFIKAVRFKPKDADDYWNRGSAH 225
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
L N + AL + L ++ +S+AY R + + LG K A DL+ + M+
Sbjct: 226 SALGNFKAALADFTEALRLNPNYSRAYSSRVGIRYLLGDQKGAKADLAQAMKIML 280
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 108/268 (40%), Gaps = 44/268 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + K +I F ++ + EA RG A + ++AAISDF++AI +
Sbjct: 117 NRGLAYSDIRKTQESIDDFTLAIQFNSQDAEAYYQRGFILAEKSNIQAAISDFSKAISLD 176
Query: 446 PSAGEAWKRRG-QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
S A+ +RG LG A D KA+ F+P AD RG + +F AA+
Sbjct: 177 RSYLSAYAQRGITLNGYLGNLPAATSDFIKAVRFKPKDADDYWNRGSAHSALGNFKAALA 236
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYK--KAEEAHLKAIQLDRNF------------ 550
D + ++L+ AY+ +G+ K KA+ A I L +N
Sbjct: 237 DFTEALRLNPNYSRAYSSRVGIRYLLGDQKGAKADLAQAMKIMLSKNLPDAGVLNALVTL 296
Query: 551 ----LEAWGHLTQFYQDLA-------------------------NSEKALECLQQVLYID 581
LE+ L Q DLA NS ALE QV+ +
Sbjct: 297 SFHELESEPELLQQISDLADLAVKNSPEDAITHIILGNIRNLQGNSSAALENFNQVISLT 356
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ AY+LR + AI DL+
Sbjct: 357 PESAIAYYLRAKIWSQPRNTNNAIMDLT 384
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 16/253 (6%)
Query: 376 SKSISVDFRLSRGIAQ----VNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
SK+IS+D AQ +N G +A S F + ++ P + RG+A +
Sbjct: 170 SKAISLDRSYLSAYAQRGITLNGYLGNLPAATSDFIKAVRFKPKDADDYWNRGSAHSALG 229
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE--FEPNSADILH 487
+AA++DFTEA++ NP+ A+ R R LG+ A DL++A++ N D
Sbjct: 230 NFKAALADFTEALRLNPNYSRAYSSRVGIRYLLGDQKGAKADLAQAMKIMLSKNLPDAGV 289
Query: 488 ERGIVNFKFKDFNAAVEDLSA-------CVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+V F + + E L VK E+ + LG + G A E
Sbjct: 290 LNALVTLSFHELESEPELLQQISDLADLAVKNSPEDAITHIILGNIRNLQGNSSAALENF 349
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I L A+ + + N+ A+ L Q + + F++AY RG+ L G+
Sbjct: 350 NQVISLTPESAIAYYLRAKIWSQPRNTNNAIMDLTQAISLSPNFAEAYLARGIALRERGE 409
Query: 601 HKKAIKDLSSGSR 613
+A D + R
Sbjct: 410 -PQATDDFNQAIR 421
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R Q AA+ +F + I P + A+ R + + + AI DL++A+ PN
Sbjct: 333 GNIRNLQGNSSAALENFNQVISLTPESAIAYYLRAKIWSQPRNTNNAIMDLTQAISLSPN 392
Query: 482 SADILHERGIV------NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
A+ RGI DFN A+ + ++L+ AY G A +G +
Sbjct: 393 FAEAYLARGIALRERGEPQATDDFNQAIRIYTEVIRLNPNGAVAYFSRGKAYLQVGNTRS 452
Query: 536 AEEAHLKAIQLDR 548
+ L+A +L R
Sbjct: 453 SFSDWLQAAKLLR 465
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
I AR++Q + E I+ S+ EA +G+ + + EAI A+
Sbjct: 18 IAPSVARSYQPDGEILIA--------QRSSAEAIFHQGKQKYEQRKYKEAIASFDGAILL 69
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYK 534
+P+ L RG+ K A+ D + + L +++ + + GLA S I + +
Sbjct: 70 KPDFIQALVYRGLAYKKLGKLEEAINDYTQALALSAKDQKMQSLIHYNRGLAYSDIRKTQ 129
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
++ + AIQ + EA+ + +N + A+ + + +D+ + AY RG+
Sbjct: 130 ESIDDFTLAIQFNSQDAEAYYQRGFILAEKSNIQAAISDFSKAISLDRSYLSAYAQRGIT 189
Query: 595 LHG-LGQHKKAIKDLSSGSR 613
L+G LG A D R
Sbjct: 190 LNGYLGNLPAATSDFIKAVR 209
>gi|309791531|ref|ZP_07686033.1| TPR repeat-containing protein [Oscillochloris trichoides DG-6]
gi|308226456|gb|EFO80182.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
Length = 450
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ F +++ +P + AL RG + E AI+DF+ AI++ A R
Sbjct: 282 RYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSR 341
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQA AL + EA++D ++A E P+ A I+ ERG + + A+ DLS ++L+ +
Sbjct: 342 GQALRALNRNSEALEDFTRAAELRPDEAWIVAERGETLRLLRRYEEAITDLSKAIELNPQ 401
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ AY+ G A S+ +++A +A+++D N AW ++ +
Sbjct: 402 DSWAYSRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQRGSLFRQM 450
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ F Q + D Y AL RG R + A++D + AI+ PS R
Sbjct: 78 RYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAER 137
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ LG + EAI D ++A+ +P+ L R I + + + A+ DL A ++LD
Sbjct: 138 GELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS 197
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G A G +A E +AI LD N+ A + + +++ALE L
Sbjct: 198 QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLS 257
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + +D + A R L L ++ +A+ D S
Sbjct: 258 RAIDLDPGYIWALSQRATLYRSLRRYDEALADFS 291
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I++D R RG + G++ A+ F + ++ P L RG R
Sbjct: 19 SRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGETYRVMRR 78
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++DF++AI + A RGQ +L EA+ DLS+A+E P+ + ++ ERG
Sbjct: 79 YDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERG 138
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A+ D + V + + A + +A Y +A AIQLD +
Sbjct: 139 ELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS- 197
Query: 551 LEAWGHLTQF-YQDLA-NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AW + + Q L+ N ++ALE L + + +D ++ A RG +GQ +A++DL
Sbjct: 198 -QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDL 256
Query: 609 SSGSRTMMPHLIWNLTR 625
S + P IW L++
Sbjct: 257 SRAI-DLDPGYIWALSQ 272
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 376 SKSISVDFRLSRGIAQVNE-----GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I + +S IA+ E G+ AIS F Q + P Y AL R A Q
Sbjct: 121 SRAIELRPSMSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQER 180
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A++D AIQ + S + RG+A+ G EA++DLS+A++ +PN A L RG
Sbjct: 181 YTEALADLEAAIQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRG 240
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A+EDLS + LD A + S+ Y +A + I L+ +
Sbjct: 241 AARRTMGQTDEALEDLSRAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSH 300
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A + ++ E+A+ + + ++ A RG L L ++ +A++D +
Sbjct: 301 VSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTR 360
Query: 611 GSRTMMPHLIW 621
+ + P W
Sbjct: 361 AA-ELRPDEAW 370
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 1/229 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ +A+S F + + DP Y A RG + A+ DF+ AI+ P R
Sbjct: 10 RHEAALSDFSRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAER 69
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ + EA+ D S+A+ + + A L RG V + ++ A+ DLS ++L
Sbjct: 70 GETYRVMRRYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPS 129
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
G L ++G +A +A+ + +++ A GH Y++ +AL L+
Sbjct: 130 MSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLE 189
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
+ +D + Y RG G +A++DLS + P+ W L
Sbjct: 190 AAIQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAI-DLDPNYAWALA 237
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 3/244 (1%)
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T S++ ++ D+ SRG + +Y A++ + ++ P + RG
Sbjct: 82 ALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERGELL 141
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AISDFT+A+ P A R A EA+ DL A++ + + A +
Sbjct: 142 RTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSSQAWL 201
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
ERG + + A+EDLS + LD A G A ++G+ +A E +AI
Sbjct: 202 YAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLSRAID 261
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD ++ A Y+ L ++AL +V+ ++ A RG + ++++AI
Sbjct: 262 LDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAI 321
Query: 606 KDLS 609
D S
Sbjct: 322 ADFS 325
>gi|434388181|ref|YP_007098792.1| trypsin-like serine protease with C-terminal PDZ domain
[Chamaesiphon minutus PCC 6605]
gi|428019171|gb|AFY95265.1| trypsin-like serine protease with C-terminal PDZ domain
[Chamaesiphon minutus PCC 6605]
Length = 516
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 15/235 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VDF L G+ + N G +I ++ +K +P Y +A I R TA + + AAISD
Sbjct: 266 AVDFFLI-GVDRFNRGNLGGSIEAMNEAIKLNPRYTKAYIARATANFMSKRIGAAISDVD 324
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AIQS P++G A+ + + G+ EA+ ++A+ P SA + + +G+V + +++
Sbjct: 325 LAIQSEPTSGLAYAGKCFFLSEFGKHGEALGACNRAVSLAPKSAMVYNVKGLVGLRLRNY 384
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE------- 552
+ A DL ++LD K Y Y LA+ + A+ L AI L R ++
Sbjct: 385 SVAAADLERSIELDP--KLYYAYNNLAI-----VRNAQRNTLAAINLARRAVQIAPKSPA 437
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L Q + + L L L + R ++AY R + +G A D
Sbjct: 438 TRALLGQLLVANKDYRQGLMELNMALGWNPRMTEAYKARAVANRAIGNTAAAQLD 492
>gi|443326895|ref|ZP_21055534.1| Tfp pilus assembly protein PilF [Xenococcus sp. PCC 7305]
gi|442793468|gb|ELS02916.1| Tfp pilus assembly protein PilF [Xenococcus sp. PCC 7305]
Length = 233
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 398 ASAISIFDQIL--KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
A AIS Q L D M E L RGT + + + AI+D I+ NP+ EA+ R
Sbjct: 27 ALAISPTQQQLAISTDRMNTEGLFERGTKKIAHGDYQGAITDLDRVIELNPNYIEAYCNR 86
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI AL+ P AD L+ +GIV + + + AV+ + D
Sbjct: 87 GMAHLGLGNLSQAIDQFDLALQVAPRHADALNRKGIVLAQQGNLDRAVDSFGRALSFDSN 146
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G A + +G + A + +AI+LD EA+G+ L + + LE L+
Sbjct: 147 FVDAYYNRGKARTGLGNLQGAISDYDEAIRLDPTLAEAYGNRGFVRAQLGDKQLGLEDLE 206
Query: 576 QV--LYID 581
Q L++D
Sbjct: 207 QAAKLFLD 214
Score = 76.3 bits (186), Expect = 6e-11, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ G Y AI+ D++++ +P Y EA RG A L AI F A+Q
Sbjct: 50 FERGTKKIAHGDYQGAITDLDRVIELNPNYIEAYCNRGMAHLGLGNLSQAIDQFDLALQV 109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A R+G A G A+ +AL F+ N D + RG + A+
Sbjct: 110 APRHADALNRKGIVLAQQGNLDRAVDSFGRALSFDSNFVDAYYNRGKARTGLGNLQGAIS 169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD AY G + +G+ + E +A +L FL+ G + + Q L
Sbjct: 170 DYDEAIRLDPTLAEAYGNRGFVRAQLGDKQLGLEDLEQAAKL---FLDL-GDMAGYQQTL 225
Query: 565 A 565
A
Sbjct: 226 A 226
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 82/176 (46%)
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI ++ E RG + A G+ AI DL + +E PN + RG+ + + +
Sbjct: 38 AISTDRMNTEGLFERGTKKIAHGDYQGAITDLDRVIELNPNYIEAYCNRGMAHLGLGNLS 97
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ +++ + A G+ L+ G +A ++ +A+ D NF++A+ + +
Sbjct: 98 QAIDQFDLALQVAPRHADALNRKGIVLAQQGNLDRAVDSFGRALSFDSNFVDAYYNRGKA 157
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
L N + A+ + + +D ++AY RG + LG + ++DL ++ +
Sbjct: 158 RTGLGNLQGAISDYDEAIRLDPTLAEAYGNRGFVRAQLGDKQLGLEDLEQAAKLFL 213
>gi|124003812|ref|ZP_01688660.1| TPR repeat protein [Microscilla marina ATCC 23134]
gi|123990867|gb|EAY30334.1| TPR repeat protein [Microscilla marina ATCC 23134]
Length = 236
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 90/169 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G + EG + A+ F+ +++D A RG A ++ + A+ DF ++I+
Sbjct: 27 LEKGRTFMQEGNFKEAVRYFNWAVEKDAQSYAAFNARGAAYFSLKDYDNALLDFNQSIKL 86
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A+ RG R + A+ D ++AL N D+ RG+VN + ++++AA++
Sbjct: 87 NDKDYKAFMNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNAQLQNYDAALK 146
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D + +K +K+NK+AY G L + ++K+A A+QLD F +A
Sbjct: 147 DFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTAVQLDARFAKA 195
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y +A+ F+Q +K + +A + RG R +L+ A++D+T+A+ N
Sbjct: 62 ARGAAYFSLKDYDNALLDFNQSIKLNDKDYKAFMNRGNVRRETNDLKGALADYTQALPLN 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + RG A L A++D ++ ++ + + + RG + + K F A+ D
Sbjct: 122 NNVPDLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIAD 181
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
V+LD A LG+A + + K+ HLK
Sbjct: 182 FRTAVQLDARFAKALYALGMA-ELLADKKEDACMHLK 217
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q+ + EA+ +G+ G EA++ + A+E + S + RG F KD++ A
Sbjct: 17 QACSKSSEAFLEKGRTFMQEGNFKEAVRYFNWAVEKDAQSYAAFNARGAAYFSLKDYDNA 76
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + +KL+ ++ A+ G + K A + +A+ L+ N + + +
Sbjct: 77 LLDFNQSIKLNDKDYKAFMNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNA 136
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L N + AL+ +V+ +K+ AY+ RG +L+ + K+AI D +
Sbjct: 137 QLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTA 185
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + A++ + Q L + P+ + RG A + +AA+ DF E I+
Sbjct: 95 MNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNAQLQNYDAALKDFNEVIKR 154
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
N A+ RG + EAI D A++ + A L+ G+
Sbjct: 155 NKQNKNAYYNRGNILYTQKKFKEAIADFRTAVQLDARFAKALYALGM 201
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+ Y +A+ F++++K + A RG Q++ + AI+DF A
Sbjct: 126 DLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTA 185
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+Q + +A G A + +A L +A AD
Sbjct: 186 VQLDARFAKALYALGMAELLADKKEDACMHLKQAANLNHPQAD 228
>gi|428306433|ref|YP_007143258.1| hypothetical protein Cri9333_2909 [Crinalium epipsammum PCC 9333]
gi|428247968|gb|AFZ13748.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 509
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 8/227 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I DF +S+ +Y +A+ +DQ LK +P Y A + +G+ + + A+S++
Sbjct: 241 IGNDFYISQ--------QYEAALKGYDQALKIEPKYVLAWLYKGSLLLELKRYQEAVSNY 292
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A+Q P + A RG A + + EAI KA++ +PN+ ++ R K +
Sbjct: 293 DRALQFKPDSTVALSNRGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGRCYALAKLQK 352
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ +K+ E A+ G L+ + +Y +A + KAI+ + N EAW +
Sbjct: 353 YQDAIASCEVAIKIQPEYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPNNAEAWANKG 412
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + +A+ Q + + +++A++ RG L L + K A+
Sbjct: 413 LALDHLQQNAEAIAAYDQAIKLQPNYAQAWYGRGNALFSLNKPKDAL 459
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S +D+ L+ P AL RG A ++ E AI+ F +AI+ P+A E W R
Sbjct: 284 RYQEAVSNYDRALQFKPDSTVALSNRGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGR 343
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A A L + +AI A++ +P +D + RG V + + ++ A+ ++ +
Sbjct: 344 CYALAKLQKYQDAIASCEVAIKIQPEYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPN 403
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A+ GLAL + + +A A+ +AI+L N+ +AW L + AL
Sbjct: 404 NAEAWANKGLALDHLQQNAEAIAAYDQAIKLQPNYAQAWYGRGNALFSLNKPKDALAAYN 463
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ + + + +A + + +L L +++ + + PH+
Sbjct: 464 KAISLKPNYQQALNSKSAVLAALQRNQDNV-----AAEGQTPHV 502
>gi|307592015|ref|YP_003899606.1| Tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
7822]
gi|306985660|gb|ADN17540.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 655
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
YA A+ + + LK +P RG + ++ + A+SD+ +AI NP +A+ RG
Sbjct: 417 YALALEAYKEALKIK-QHPWTYNNRGLLYSDLQKYKLALSDYNKAIALNPLLEQAYYNRG 475
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ L + A+ D KA++ P + + RG + K+++ A+ D + ++ + E+
Sbjct: 476 VLYSQLKKYELALSDYDKAIQLNPEDTQVYYNRGNLYKTLKEYDKALFDYNKAIEFNSED 535
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY + + EYKKA + KAI+++ + + + Y++L E AL +
Sbjct: 536 AQAYNNRAVVYKELKEYKKALSDYNKAIEINPDDARTYYNRGILYKELEEYELALSDYSK 595
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ I+ + + AY RG+L G K+AI DL
Sbjct: 596 AIEINPQLAFAYANRGILYAQTGNKKQAISDL 627
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + KY A+S +++ + +P+ +A RG + ++ E A+SD+ +AIQ N
Sbjct: 439 NRGLLYSDLQKYKLALSDYNKAIALNPLLEQAYYNRGVLYSQLKKYELALSDYDKAIQLN 498
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG L E +A+ D +KA+EF A + R +V + K++ A+ D
Sbjct: 499 PEDTQVYYNRGNLYKTLKEYDKALFDYNKAIEFNSEDAQAYNNRAVVYKELKEYKKALSD 558
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ ++ Y G+ + EY+ A + KAI+++ A+ + Y
Sbjct: 559 YNKAIEINPDDARTYYNRGILYKELEEYELALSDYSKAIEINPQLAFAYANRGILYAQTG 618
Query: 566 NSEKALECLQ 575
N ++A+ LQ
Sbjct: 619 NKKQAISDLQ 628
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 34/276 (12%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG---- 422
K C I K + + L +G+ + + +Y AI F + + DP + +A +G
Sbjct: 320 KACDKAIEKQPKSANAYYL-KGLLFLYQFQYPEAIINFKKATQFDPKFHQAWRQQGFCFL 378
Query: 423 -------TARAFQRELEAAISDFTEAIQ---------SNPSAGEAWKR------------ 454
+ A+Q+ ++ A +F I+ + A EA+K
Sbjct: 379 MLEQYPDASTAYQQAIKYAPGEFVYYIEQAGVLKRLKNYALALEAYKEALKIKQHPWTYN 438
Query: 455 -RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + L + A+ D +KA+ P + RG++ + K + A+ D ++L+
Sbjct: 439 NRGLLYSDLQKYKLALSDYNKAIALNPLLEQAYYNRGVLYSQLKKYELALSDYDKAIQLN 498
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E+ Y G ++ EY KA + KAI+ + +A+ + Y++L +KAL
Sbjct: 499 PEDTQVYYNRGNLYKTLKEYDKALFDYNKAIEFNSEDAQAYNNRAVVYKELKEYKKALSD 558
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + I+ ++ Y+ RG+L L +++ A+ D S
Sbjct: 559 YNKAIEINPDDARTYYNRGILYKELEEYELALSDYS 594
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++KAI L+ LL Q+Y NR YSQL+ ++ + D DKA+QL+P Q Y
Sbjct: 452 LALSDYNKAIA-LNPLLEQAY-----YNRGVLYSQLKKYELALSDYDKAIQLNPEDTQVY 505
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
+G + L ++AL + K E
Sbjct: 506 YNRGNLYKTLKEYDKALFDYNKAIE 530
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQA 105
L L+N++ A+ L NR YS L+ +K + D +KA+ L+P L QA
Sbjct: 411 LKRLKNYALALEAYKEALKIKQHPWTYNNRGLLYSDLQKYKLALSDYNKAIALNPLLEQA 470
Query: 106 YILKGCAFSALGRKEEALSVWEKG 129
Y +G +S L + E ALS ++K
Sbjct: 471 YYNRGVLYSQLKKYELALSDYDKA 494
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E + A+SD+ +AI+ NP + RG L E A+ D SKA+E P A
Sbjct: 550 KEYKKALSDYNKAIEINPDDARTYYNRGILYKELEEYELALSDYSKAIEINPQLAFAYAN 609
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
RGI+ + + A+ DL L ++ + Y
Sbjct: 610 RGILYAQTGNKKQAISDLQIAADLFRQQGNVTDY 643
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ KA+E +P SA+ + +G++ + A+ + + D + A+ G
Sbjct: 317 EAIKACDKAIEKQPKSANAYYLKGLLFLYQFQYPEAIINFKKATQFDPKFHQAWRQQGFC 376
Query: 527 LSSIGEYKKAEEAHLKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
+ +Y A A+ +AI+ ++E G L + L N ALE ++ L I K
Sbjct: 377 FLMLEQYPDASTAYQQAIKYAPGEFVYYIEQAGVLKR----LKNYALALEAYKEALKI-K 431
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKD 607
+ Y+ RGLL L ++K A+ D
Sbjct: 432 QHPWTYNNRGLLYSDLQKYKLALSD 456
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S +++ ++ +P RG E E A+SD+++AI+ NP A+ R
Sbjct: 551 EYKKALSDYNKAIEINPDDARTYYNRGILYKELEEYELALSDYSKAIEINPQLAFAYANR 610
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
G A G +AI DL A AD+ ++G V
Sbjct: 611 GILYAQTGNKKQAISDLQIA-------ADLFRQQGNV 640
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
L + K + + ++ + +S A A R + K +L +++KAI I + A++Y
Sbjct: 515 LKEYDKALFDYNKAIEFNSEDAQAYNNRAVVYKELKEYKKALSDYNKAIEI-NPDDARTY 573
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR Y +LE ++ + D KA++++P L AY +G ++ G K++A+S
Sbjct: 574 -----YNRGILYKELEEYELALSDYSKAIEINPQLAFAYANRGILYAQTGNKKQAIS 625
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L +++KAI +S AQ+Y NRA Y +L+ +K + D +KA++++P + Y
Sbjct: 521 ALFDYNKAIE-FNSEDAQAYN-----NRAVVYKELKEYKKALSDYNKAIEINPDDARTYY 574
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G + L E ALS + K E
Sbjct: 575 NRGILYKELEEYELALSDYSKAIE 598
>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1737
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + ++ AIS + Q +K P P+ G A Q+ E A+ + + + P+
Sbjct: 257 GYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPN 316
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E + G A + L + EAI KA E +PNS D+ H+ G + K + AV +L
Sbjct: 317 SPEVYHYFGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVELR 376
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V+L+ AY LG ALS+I ++ +A + AI+L+ N E +G+L + Y
Sbjct: 377 QAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQW 436
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLL 595
++A+ L ++ + + +H L L
Sbjct: 437 DEAIVNYGHALKLNPKLPEVHHNLALTL 464
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ S++ I+ +F +S G A V +G AI+ F + + +P A G A
Sbjct: 99 AIASYSQAIKINPNFSELYISLGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVAL 158
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q ++E I + +AI+ +P E +++ G A GE +A + KA + PNSA +
Sbjct: 159 EKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPNSATV 218
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
H G K + ++ A+ +KL+ + Y G L+ ++++A A+ +AI+
Sbjct: 219 YHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIK 278
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N + + HL N E+A+ ++V + + YH G L L Q ++AI
Sbjct: 279 IKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYALSQLQQWEEAI 338
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK+ A +++ + ++ P + G + Q +LE AI+ +++AI+ NP+ E +
Sbjct: 60 GKWEEAATVYQKAIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYIS 119
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A G EAI + KA+ EP S+ G+ K + +++D
Sbjct: 120 LGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKAIEIDP 179
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG+AL+ GE+ +A + +LKA Q+ N + H + L ++A+
Sbjct: 180 GFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAY 239
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+Q + ++ YH G +L Q ++AI
Sbjct: 240 RQAIKLEANSPVIYHQFGYVLTQKQQWEEAI 270
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +G++ A I+ + + P G A R + AI+ + +AI+ +
Sbjct: 189 GIALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAYRQAIKLEAN 248
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + + G + EAI +A++ +PNS D+ H G + +++ AV
Sbjct: 249 SPVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYR 308
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L + Y Y G ALS + ++++A A+ KA +L N + L +L +
Sbjct: 309 KVTELQPNSPEVYHYFGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQN 368
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ A+ L+Q + ++ ++AY G L + Q +AI G+ + P+L
Sbjct: 369 DWAVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASF-QGAIELNPNL 419
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +G+ I + + ++ DP + E G A Q E A + +A Q P+
Sbjct: 155 GVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPN 214
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G+ A L EAI +A++ E NS I H+ G V + + + A+
Sbjct: 215 SATVYHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYR 274
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K+ + Y +LG AL+ +++A A+ K +L N E + + L
Sbjct: 275 QAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYALSQLQQW 334
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+A+ ++ + +H G L L Q+ A+ +L
Sbjct: 335 EEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVEL 375
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++ ++ AI + LK +P PE Q++ + AI + +AI+ +
Sbjct: 427 GKAYASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELGIN 486
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + G + L EA+ +A E PNSA + H G + + ++ AV +
Sbjct: 487 TAEIHHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDEAVAAYT 546
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L ++ ++G +S +G + +A EA+ KA++L + + L +
Sbjct: 547 KASQLHPKSADVRYHIGEVMSRLGRWDEAVEAYGKAVELRPSSAKFHFQLGEAKTKKNPL 606
Query: 568 EKALECLQQVLYIDKRFSKA 587
+A+ C ++ L ID FSKA
Sbjct: 607 TEAISCYRRALEIDPHFSKA 626
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P +G +LE A++ + + I+ NP+ + G A +G+ EA K
Sbjct: 12 PTQYFQQGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQNLGDVLAKIGKWEEAATVYQK 71
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +P SA + G V K A+ S +K++ Y LG AL G
Sbjct: 72 AIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYISLGSALVQKGLLY 131
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A KAI L+ A +L + E+ + C ++ + ID F + Y G+
Sbjct: 132 EAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIA 191
Query: 595 LHGLGQHKKAIK 606
L G+ +A K
Sbjct: 192 LTKQGEFHQAAK 203
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 98/218 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ AI + + + P P+ G A ++ + A+ + +A++ NP+ EA++
Sbjct: 333 QWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVELRQAVELNPNLAEAYRDL 392
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A + + + EAI A+E PN A++ G K ++ A+ + +KL+ +
Sbjct: 393 GRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHALKLNPK 452
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ L L L ++ A ++ +AI+L N E L L ++A+ +
Sbjct: 453 LPEVHHNLALTLVQQQKFDDAIVSYGQAIELGINTAEIHHQLGHTLSKLKRWDEAVISYR 512
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q I+ + YH+ G L L + +A+ + S+
Sbjct: 513 QAAEINPNSAAVYHVLGESLAQLEKWDEAVAAYTKASQ 550
>gi|145482337|ref|XP_001427191.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394271|emb|CAK59793.1| unnamed protein product [Paramecium tetraurelia]
Length = 610
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+++IS++ ++ AQ N+G Y AI +D+ + DP A +G A
Sbjct: 134 NQTISINPKVFN--AQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALICL 191
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI + EAI NP WK +G A L + EA++ +++ P D +
Sbjct: 192 KQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQIDAWYG 251
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+V + K + A++ + ++ + A+ G AL+ + +Y++A ++ KAI +D
Sbjct: 252 KGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNKAISIDP 311
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ A+ + L + +A++C + + I+ ++ A++ +G L L +++AIK
Sbjct: 312 KCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQEAIK 369
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 130/266 (48%), Gaps = 14/266 (5%)
Query: 357 ETSNEAKRNKK----FCVTRISKS-----KSISVDFRLS-----RGIAQVNEGKYASAIS 402
+ N++ RNKK C+ + ++ ++IS++ + S +G ++ A+
Sbjct: 174 DPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALK 233
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+++ + +P +A G+G ++ + AI F EAI NP +AW +G A A L
Sbjct: 234 SYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKL 293
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ EAIQ +KA+ +P + +G+ + + + A++ + + ++ + A+
Sbjct: 294 NQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYN 353
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G +L+ + Y++A + + +AI ++ F AW + L + A++ + + I+
Sbjct: 354 KGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINP 413
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ A+ +G L L Q+++AIK
Sbjct: 414 QYNDAWFSKGQALARLKQYQEAIKSF 439
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS+D R +G A + +Y AI +D+ + +P + +G A +
Sbjct: 169 EAISIDPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQH 228
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A+ + E+I NP +AW +G L + AIQ +A+ P D + +G
Sbjct: 229 QEALKSYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGN 288
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + A++ + + +D + A+ GLAL+ + Y++A + + +AI ++ +
Sbjct: 289 ALAKLNQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYG 348
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + L + ++A++C + ++I+ +F A++++G +L L ++ AIK
Sbjct: 349 YAFYNKGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSF 405
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 111/222 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A N +Y AI +DQ + DP Y A G+G A A ++ + AI + +AI +P
Sbjct: 48 KGQALANLKQYQEAIKCYDQAISIDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDP 107
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +G + A L E EAI+ ++ + P + +G K K + A++
Sbjct: 108 KYYPTYYYKGLSLAELKEYQEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCY 167
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D +N+SA G AL + +Y++A + + +AI ++ F W + +L
Sbjct: 168 DEAISIDPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQ 227
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++AL+ ++ + I+ + A++ +GL+L L Q+K AI+
Sbjct: 228 HQEALKSYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSF 269
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +G+ +Y AI FD+ + +P Y +A G+G A A + + AI F +
Sbjct: 246 IDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNK 305
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI +P A+ +G A A L EAI+ ++A+ P + +G + + +
Sbjct: 306 AISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQ 365
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ + ++ + +A+ G L + Y+ A ++ +AI ++ + +AW Q
Sbjct: 366 EAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINPQYNDAWFSKGQA 425
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L ++A++ + + I+ + A+ +G L L Q+++AIK
Sbjct: 426 LARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQYQEAIK 471
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S +K+IS+D + ++G+A Y AI +++ + +P Y A +G + A
Sbjct: 302 SFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARL 361
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + EAI NP AW +G+ L AI+ +A+ P D
Sbjct: 362 QHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINPQYNDAWFS 421
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + K + A++ + ++ E A+ G AL+S+ +Y++A +++ +AI ++
Sbjct: 422 KGQALARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQYQEAIKSYDEAIFINP 481
Query: 549 NF 550
N
Sbjct: 482 NL 483
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++Q + +P A +G A A + + AI + EAI +P A ++
Sbjct: 125 EYQEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKK 184
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + EAI+ +A+ P +++ +G + A++ + ++ +
Sbjct: 185 GNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQ 244
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ GL L+ + +YK A ++ +AI ++ + +AW L ++A++
Sbjct: 245 QIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFN 304
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + ID + A++ +GL L L +++AIK
Sbjct: 305 KAISIDPKCVYAFYNKGLALARLQHYREAIK 335
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ AI + EAI NP AW+ +GQA A L + EAI+ +A+ +P A
Sbjct: 22 KQYNEAIKCYDEAISINPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKYASAWQG 81
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G K + A++ + +D + Y Y GL+L+ + EY++A + + + I ++
Sbjct: 82 KGQALANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEYQEAIKCYNQTISINP 141
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A + L ++A++C + + ID + A + +G L L Q+++AIK
Sbjct: 142 KVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALICLKQYQEAIK 199
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS+D + + +G A N +Y AI +DQ + DP Y +G + A +E
Sbjct: 67 QAISIDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEY 126
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + + I NP A K +G A A L EAI+ +A+ +P + +++G
Sbjct: 127 QEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGN 186
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + A++ + ++ + + + G L+ + ++++A +++ ++I ++ +
Sbjct: 187 ALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQI 246
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+AW L + A++ + + I+ +++ A++ +G L L Q+++AI+ +
Sbjct: 247 DAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNKA 306
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +Y AI F++ + DP A +G A A + AI + EAI NP
Sbjct: 286 KGNALAKLNQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINP 345
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
G A+ +G + A L EAI+ +A+ P + +G V + A++
Sbjct: 346 KYGYAFYNKGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSF 405
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + A+ G AL+ + +Y++A ++ +AI ++ +AW Q L
Sbjct: 406 DEAISINPQYNDAWFSKGQALARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQ 465
Query: 567 SEKALECLQQVLYID 581
++A++ + ++I+
Sbjct: 466 YQEAIKSYDEAIFIN 480
>gi|425447925|ref|ZP_18827906.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
gi|389731403|emb|CCI04529.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
Length = 991
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + ++ + AISD+++AI NP+ EA+ RG + L + A+ D SKA++ P
Sbjct: 692 RGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINP 751
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ RG+ + + ++ A+ D + +++ + AY GL + +Y A +
Sbjct: 752 NLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDY 811
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ + EA+ Y +L + AL Q + I+ ++AY RG+L + +
Sbjct: 812 DKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQK 871
Query: 601 HKKAIKDLS 609
++ A+ D S
Sbjct: 872 YELALSDYS 880
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 7/227 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + KY AIS + Q + +P EA RG + ++ + A+SDF++AI N
Sbjct: 691 NRGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDIN 750
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG + A+ D KA++ N A + RG++ F + ++ A+ D
Sbjct: 751 PNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSD 810
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + AY GL ++ +Y A + +AI+++ N EA+G+ Y +
Sbjct: 811 YDKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQ 870
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG-------QHKKAI 605
E AL + + ++K A GL+ + G Q KKA+
Sbjct: 871 KYELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKAL 917
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ N+ KY A+S +D+ + + A RG ++ + A+SD+ +AI
Sbjct: 758 LNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDI 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ RG L + A+ D ++A+ PN A+ RG++ + + + A+
Sbjct: 818 NHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYELALS 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++L+K+ A T +GL G +A E KA+ ++ E L +
Sbjct: 878 DYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLALAVVFYHQ 937
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
+KAL+ + L ID +F+ L+
Sbjct: 938 GEKDKALKLAESALKIDSQFANIDFLK 964
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK-RR 455
Y A+++ +Q + P P + + + + ++ T+AI P A AW R
Sbjct: 635 YEQALTVINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQAINLAPRA--AWYYNR 692
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L + AI D S+A++ PN A+ + RGI+ + ++ A+ D S + ++
Sbjct: 693 GVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPN 752
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G+ + +Y A + KAI ++RN A+ + Y DL + AL
Sbjct: 753 LAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYD 812
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ + I+ ++AY RGLL + L ++ A+ D + R + P+L
Sbjct: 813 KAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIR-INPNL 855
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 46/279 (16%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE---DPMYPEALIGRGTA----- 424
I + + D + RG G++ AI FD+ +K+ D +Y A G+G A
Sbjct: 534 IVPNTNAKADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVY-LAWYGKGLALFALD 592
Query: 425 ------RAFQREL------------------------------EAAISDFTEAIQSNPSA 448
A Q+ + E A++ +AI P+
Sbjct: 593 KDQPAIEALQQAINTLPKREDLKNFHSSILQRQSVVYRYLENYEQALTVINQAISLFPNN 652
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
++ + L E + +++A+ P +A + RG++ + ++ A+ D S
Sbjct: 653 PNSYNEKSSVLNQLNRYDEGLAAITQAINLAPRAA-WYYNRGVLYSDLQKYDLAISDYSQ 711
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ ++ AY G+ S + +Y A KAI ++ N EA+ + FY + +
Sbjct: 712 AIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKYD 771
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AL + + I++ + AY+ RGLL L ++ A+ D
Sbjct: 772 LALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSD 810
>gi|355726727|gb|AES08962.1| tetratricopeptide repeat domain 13 [Mustela putorius furo]
Length = 636
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K A
Sbjct: 3 SPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIA 61
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+ L
Sbjct: 62 MLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALL 121
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ + LRG++L+ G ++A+K+
Sbjct: 122 LNQNHVQTLQLRGMMLYHHGSLQEALKNF 150
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 11 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 70
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 71 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 130
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 131 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 188
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D T+AIQ PSA ++ RG + A +D ++LE N + +G+
Sbjct: 11 AVNDLTKAIQLQPSA-RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 69
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ L++N ++
Sbjct: 70 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQT 129
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++AL+ ++ L ++ +++GL +GQ + IK
Sbjct: 130 LQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIK 182
>gi|414076244|ref|YP_006995562.1| TPR repeat-containing proptein [Anabaena sp. 90]
gi|413969660|gb|AFW93749.1| TPR repeat-containing proptein [Anabaena sp. 90]
Length = 972
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G + +AI+ FDQ + P Y A RG A + AI + +A+
Sbjct: 379 SRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYDQAVNLE 438
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A + + EAI +AL +PN ++ +RG+V F K + A+E
Sbjct: 439 PQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIES 498
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ + E A+ G++ +G + A ++ +AI + +F AW + + FY D
Sbjct: 499 WDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAVALFYLD 558
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
S +A+ + L I + +A+ RG L H+ ++
Sbjct: 559 --RSAQAISGYDRALEIKLDYWEAWLGRGAAAGHLTPHQSSL 598
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R S+ + ++ ++G+ +++ AI+ +DQ L P + + RG+ +
Sbjct: 331 RASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPDFYQVWYSRGSILGELGDF 390
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ F +AI P AW RG A LG EAI +A+ EP ++ + RGI
Sbjct: 391 DAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYDQAVNLEPQDSEAWYYRGI 450
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+ + L + G+ L ++ ++ +A E+ +A+ + F
Sbjct: 451 ALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIESWDQALAIQPEFY 510
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AW + ++ L E A+ QQ + I F A++ + + L L + +AI
Sbjct: 511 LAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAVALFYLDRSAQAI 564
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G +A++++++ + P E +G + + AI+ + + + P
Sbjct: 313 GLRQAKAGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPD 372
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG LG+ AI +A+ +P+ RG+ K A++
Sbjct: 373 FYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYD 432
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V L+ ++ A+ Y G+AL+ + +Y +A ++ +A+ L N+ E W +L
Sbjct: 433 QAVNLEPQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQW 492
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+E Q L I F A++ RG+ LG+ + AI
Sbjct: 493 LEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAI 530
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+ N ++ AI +DQ L P + A RG + E AIS + +AI
Sbjct: 480 IDRGVVLFNLKQWLEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAI 539
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P AW + A L S +AI +ALE +
Sbjct: 540 KPDFHPAWYNQAVALFYLDRSAQAISGYDRALEIK 574
>gi|407957284|dbj|BAM50524.1| mitochondrial outer membrane 72K protein [Bacillus subtilis
BEST7613]
Length = 244
Score = 82.4 bits (202), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + AI+DFTE+I+ N +A+ RG A+ LG+ AI D ++A+ P
Sbjct: 27 GVDKLAAQNFSGAIADFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISLNPE 86
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A L R F ++ A++D S ++++ Y Y G + S +G A +
Sbjct: 87 FAYALGNRCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYN 146
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
AI+++ A+ + + L ++AL Q + +D ++AY RGL + LG
Sbjct: 147 DAIRINAQHANAYYNRALTHNRLKQDQQALADYNQSIQLDPDSAEAYFNRGLTQYRLGDE 206
Query: 602 KKAIKDLSSGS 612
KAI DL+ +
Sbjct: 207 PKAIADLTKAA 217
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ G+Y +AI+ ++Q + +P + AL R A + + AI D + A
Sbjct: 55 DAYYNRGYAKHVLGQYQAAITDYNQAISLNPEFAYALGNRCYAYFLLSQYDKAIQDCSNA 114
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ + + RG +++ LG AI D + A+ A+ + R + + + K
Sbjct: 115 IEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIRINAQHANAYYNRALTHNRLKQDQQ 174
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+ D + ++LD ++ AY GL +G+ KA KA +L
Sbjct: 175 ALADYNQSIQLDPDSAEAYFNRGLTQYRLGDEPKAIADLTKAAEL 219
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++ ++ AI+ F + +K + +A RG A+ + +AAI+D+ +AI NP
Sbjct: 27 GVDKLAAQNFSGAIADFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISLNPE 86
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A R A L + +AIQD S A+E PN AD RG + + A+ D +
Sbjct: 87 FAYALGNRCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYN 146
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQF 560
++++ ++ +AY L + + + ++A + ++IQLD + EA+ + LTQ+
Sbjct: 147 DAIRINAQHANAYYNRALTHNRLKQDQQALADYNQSIQLDPDSAEAYFNRGLTQY 201
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
LS + + SA + G+ ++F+ A+ D + +KL+ ++ AY G A +G
Sbjct: 9 LSLPVLAQTKSAVQWYNDGVDKLAAQNFSGAIADFTESIKLNDQDADAYYNRGYAKHVLG 68
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y+ A + +AI L+ F A G+ Y L+ +KA++ + I+ ++ Y R
Sbjct: 69 QYQAAITDYNQAISLNPEFAYALGNRCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYR 128
Query: 592 GLLLHGLGQHKKAIKDLSSGSRTMMPH 618
G LG AI D + R H
Sbjct: 129 GNSQSQLGNETTAIADYNDAIRINAQH 155
>gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
Length = 295
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ + ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G++ A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G L Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 162 GRLDQ----------ALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 206
>gi|427721153|ref|YP_007069147.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
gi|427353589|gb|AFY36313.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
Length = 709
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 108/211 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A++ +D+ ++ P Y EA GRG + + + AI+ F +A+Q + E W +
Sbjct: 379 KYKEALAAYDKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAK 438
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQA + L + AI+ KA++ + +S + + +G K ++ A+ V+ +
Sbjct: 439 GQALSNLNQYENAIKSYDKAIDLKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPD 498
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G AL ++ Y+ A A+ +A++ +N+ +AW +L +A+E
Sbjct: 499 YEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFN 558
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
QV+ + +A++ RG LH ++++A++
Sbjct: 559 QVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQ 589
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 102/214 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++++++ + P Y + G+G + + + A++ + +AIQ P EAW R
Sbjct: 345 RYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAYDKAIQIQPEYLEAWSGR 404
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EAI KAL+ + N ++ +G + A++ + L ++
Sbjct: 405 GFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQYENAIKSYDKAIDLKQD 464
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G AL ++ Y +A A+ KA++ ++ +AW + +L E A
Sbjct: 465 SYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAFTAYN 524
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + + + +A+ RG +L L ++ +AI+ +
Sbjct: 525 QAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFN 558
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + N +Y AI+ FD+ L+ YPE + +G A + + E AI + +AI
Sbjct: 403 GRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQYENAIKSYDKAIDLK 462
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EAW +G A L EAI KA+EF+P+ + RG + + A
Sbjct: 463 QDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAFTA 522
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG------HLTQ 559
+ V+ + A+ G L ++ Y +A E+ + I+ + + +AW H +Q
Sbjct: 523 YNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQSQ 582
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
Y E+A++ + + + + +A++ G L+ L ++++AI + R + H
Sbjct: 583 RY------EEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKYEQAIAAYNRAVRYKVDH 635
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
L++G A N +Y +AI +D+ LK+D EA +G A + + AI+ + +A+
Sbjct: 436 LAKGQALSNLNQYENAIKSYDKAIDLKQDSY--EAWYNKGWALHNLKRYDEAIAAYDKAV 493
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +AW RG A L +A ++A+ ++ N RG + + + A
Sbjct: 494 EFKPDYEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEA 553
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + +K + ++ A+ G +L Y++A +++ KAI + +N +AW L
Sbjct: 554 IESFNQVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLY 613
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L E+A+ + + ++++ RG L L ++ +AI
Sbjct: 614 VLQKYEQAIAAYNRAVRYKVDHYESWYSRGNALVNLQRYPEAI 656
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISK------SKSISVDFR-------LSRGIAQVNEGKYASAI 401
LK+ S EA NK + + + + + +V+F+ +RG A VN +Y A
Sbjct: 461 LKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAF 520
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ ++Q ++ Y +A + RG R AI F + I+ N + +AW RG +
Sbjct: 521 TAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQ 580
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
EA+Q +KA+ + N + G + + + A+ + V+ ++ ++
Sbjct: 581 SQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKYEQAIAAYNRAVRYKVDHYESWY 640
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
G AL ++ Y +A ++ KAI+ ++ +A
Sbjct: 641 SRGNALVNLQRYPEAIASYAKAIKYKPDYQQA 672
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 82/180 (45%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++ + +A+ P + W +G++ L + EA+ KA++ +P + RG
Sbjct: 349 ALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAYDKAIQIQPEYLEAWSGRGFSL 408
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ ++L + G ALS++ +Y+ A +++ KAI L ++ EA
Sbjct: 409 KNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQYENAIKSYDKAIDLKQDSYEA 468
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
W + +L ++A+ + + + +A++ RG L L +++ A + R
Sbjct: 469 WYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAFTAYNQAVR 528
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L+ +G F + + A+ V + + + G +L + +YK+A A+
Sbjct: 328 NNATDLYNQGNTLFDLQRYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAY 387
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +LEAW ++L ++A+ + L + + + + +G L L Q
Sbjct: 388 DKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQ 447
Query: 601 HKKAIK 606
++ AIK
Sbjct: 448 YENAIK 453
>gi|392408712|ref|YP_006445319.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390621848|gb|AFM23055.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 439
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 17/243 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ + + +AI F + ++ DP+ + RG A + + AI+D+++A++
Sbjct: 47 NRGVEELKQDRLDAAIDSFTRAVQLDPLDHLSYNNRGVAYKRKGLFDKAIADYSKALEVK 106
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG AR G+ A++DLS A + + I+ GIV + D + A++D
Sbjct: 107 PDYYFALANRGTARFKKGDLDGALKDLSDAAKQGKKESAIITTLGIVRKETGDLDQALKD 166
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFLEAWGHLTQ 559
L V L K+N AY LG +Y KA +++ KA++L E G L +
Sbjct: 167 LKQAVSLAKKNTRAYIALGELYELQKDYSKALDSYTKAVELGDLKEAGPQLKEKIGSLRK 226
Query: 560 FY-QDL----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y +L N + A+ L I+ FS RGL H +G++K+AI D
Sbjct: 227 TYAMELHQEGLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDF 286
Query: 609 SSG 611
+
Sbjct: 287 DTA 289
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 51/280 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G + AI+ + + L+ P Y AL RGTAR + +L+ A+ D ++A +
Sbjct: 81 NRGVAYKRKGLFDKAIADYSKALEVKPDYYFALANRGTARFKKGDLDGALKDLSDAAKQG 140
Query: 446 P---------------------------SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
A K+ +A ALGE E +D SKAL+
Sbjct: 141 KKESAIITTLGIVRKETGDLDQALKDLKQAVSLAKKNTRAYIALGELYELQKDYSKALDS 200
Query: 479 EPNSADI------------------------LHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ ++ LH+ G+ N++ + A+ SA +K++
Sbjct: 201 YTKAVELGDLKEAGPQLKEKIGSLRKTYAMELHQEGLKNYREGNEKHAITIWSAALKIEP 260
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ GL IG+YK+A + AI + + E + + L ++AL
Sbjct: 261 DFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAELYRVRADAFYRLKQPDRALADY 320
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
Q L ++ R S AY+ RGL+ H KA++D S T
Sbjct: 321 TQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAIST 360
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ EG AI+I+ LK +P + L RG + + AI DF AI PS
Sbjct: 236 GLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPS 295
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E ++ R A L + A+ D ++AL+ + + RG+V + D N A+ED S
Sbjct: 296 NAELYRVRADAFYRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYS 355
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ D +N + L + +KA E + +A++L
Sbjct: 356 KAISTDPDNPVFFENRALVYLLKKQNQKALEDYREALRL 394
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 365 NKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N+K +T S + I DF RG+ GKY AI FD + ++P E + R
Sbjct: 244 NEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAE--LYR 301
Query: 422 GTARAFQR--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
A AF R + + A++D+T+A+Q N A+ RG + +A++D SKA+ +
Sbjct: 302 VRADAFYRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAISTD 361
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P++ R +V K A+ED ++L E
Sbjct: 362 PDNPVFFENRALVYLLKKQNQKALEDYREALRLTNE 397
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ ++ A++ P + RG +G+ +AI D A+ EP++A++ R
Sbjct: 248 AITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAELYRVRADAF 307
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ K + A+ D + ++L+ + AY GL + KA E + KAI D +
Sbjct: 308 YRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAISTDPDNPVF 367
Query: 554 WGHLTQFYQDLANSEKALECLQQVL 578
+ + Y ++KALE ++ L
Sbjct: 368 FENRALVYLLKKQNQKALEDYREAL 392
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 17/214 (7%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSN--PSAGEAWKRR-GQARAAL----------- 462
A I G Q++ A+ +T+A++ AG K + G R
Sbjct: 180 AYIALGELYELQKDYSKALDSYTKAVELGDLKEAGPQLKEKIGSLRKTYAMELHQEGLKN 239
Query: 463 ---GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G AI S AL+ EP+ + +L +RG+ K + A++D + + N
Sbjct: 240 YREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAEL 299
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y A + + +A + +A+QL+ A+ + Y + + KALE + +
Sbjct: 300 YRVRADAFYRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAIS 359
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
D + R L+ Q++KA++D R
Sbjct: 360 TDPDNPVFFENRALVYLLKKQNQKALEDYREALR 393
>gi|159027768|emb|CAO89638.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 339
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + L GI Q+ G Y A+ F+Q L+++ A R + ++ A
Sbjct: 64 AQSVHFSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAW 123
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 124 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIRLKPTYYQAYYNRGLVQSA 183
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 184 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 243
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L +++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 244 ASAYYNLACTAHQLGEYNRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 303
Query: 611 GSRTM 615
G+ +
Sbjct: 304 GANHL 308
>gi|158521784|ref|YP_001529654.1| hypothetical protein Dole_1773 [Desulfococcus oleovorans Hxd3]
gi|158510610|gb|ABW67577.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 318
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q+ + K AI++F + ++++P +A RG A + +L+ AI DF+ AI+ +P
Sbjct: 41 GLEQMRQSKPDQAIALFSKAIEDNPNRAKAYYHRGNAYGIKHDLDNAIDDFSTAIELDPL 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ R A GE A+ D + A+E P S +RGIV ++ +AA +D +
Sbjct: 101 FLDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFT 160
Query: 508 ACVKLDKENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + S AY + G+ L G+ +A + I ++ +A+ Y +L
Sbjct: 161 RVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELGE 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+KA++ ++L + +A+ LRG G +AIKD
Sbjct: 221 YDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKD 261
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D + R A +G+ +A+S F ++ P A + RG Q L+AA DFT
Sbjct: 102 LDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFTR 161
Query: 441 AIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I+ P SA A+ RG G+ ++A+ DL++ ++ EP RG + F+ ++
Sbjct: 162 VIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELGEY 221
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A++D + + A+ G A + G+ +A + + +A+ +D F A
Sbjct: 222 DKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAA 275
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 371 TRISKSKSISVDF-RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
TR+ + + +S RG+ +G+ A++ +++ +P +A RG
Sbjct: 160 TRVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELG 219
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI D + P A+ RG A A G+ AI+D +AL +P A L ++
Sbjct: 220 EYDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAALEKK 279
Query: 490 GIVNFKFKDFNAAVEDLS-AC 509
G+ + D A + + AC
Sbjct: 280 GMALLETDDITGACQAFAQAC 300
>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
Length = 283
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ + ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G++ A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G L Q AL Q + + +AYH RGL+ G HK+AI+D S
Sbjct: 150 GRLDQ----------ALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFS 194
>gi|166363119|ref|YP_001655392.1| hypothetical protein MAE_03780 [Microcystis aeruginosa NIES-843]
gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 1379
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + KY A++ + + L+ +P EA +GRG+ + Q++ E A++D+++A++
Sbjct: 976 LGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEI 1035
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG + A+ D +KALE PN A RG + + K + A+
Sbjct: 1036 NPNLAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALA 1095
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ +AY G + +Y+ A KAI+LD A+ + Y D
Sbjct: 1096 DYNKAIDINPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQ 1155
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E AL + + +D + + AY RG L + +++ A+ D
Sbjct: 1156 QKYELALADFNKAIELDSKLAMAYSNRGNLYYLQQKYELALAD 1198
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + KY A++ + + L+ +P EA +GRG Q++ E A++DF +A++
Sbjct: 1010 LGRGSIYSLQQKYELALADYSKALEINPNLAEAYLGRGGIYLLQQKYELALADFNKALEI 1069
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG+ + A+ D +KA++ PN A+ + RG + + + + A+
Sbjct: 1070 NPNYAMAYFGRGELYYYQKKYELALADYNKAIDINPNYANAYNNRGSIYYNQQKYELALA 1129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + AY+ G + +Y+ A KAI+LD A+ + Y
Sbjct: 1130 DWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSNRGNLYYLQ 1189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
E AL + L I+ ++AY RG + + + + A+ D + + P+L+
Sbjct: 1190 QKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIE-INPNLVEAYN 1248
Query: 625 RWRNLCF 631
NL +
Sbjct: 1249 NRGNLYY 1255
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+S + + + +P Y A RG Q++ + A+SD+++AI NP+ E + RG
Sbjct: 855 ALSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLY 914
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A+ D SKA++ PN A + RG++ + + A+ D + ++L++ A
Sbjct: 915 KDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALA 974
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G S +Y+ A + KA++++ N EA+ Y E AL + L
Sbjct: 975 YLGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALE 1034
Query: 580 IDKRFSKAYHLRG 592
I+ ++AY RG
Sbjct: 1035 INPNLAEAYLGRG 1047
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + SK+I ++ +RG N KY A+S + + + +P +A
Sbjct: 736 KKYELALADYSKAIDINPNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYN 795
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG-------QARAALGESVEAIQ--- 470
RG + ++ + A+SD+++AI NP+ E + RG + AL + +AI
Sbjct: 796 RGNLYSDLQKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYTKAIDILA 855
Query: 471 --DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
D +KA++ PN A + RG++ F K ++ A+ D S + ++ Y G
Sbjct: 856 LSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLYK 915
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +Y A + KAI ++ N+ A+ + Y E AL + + +++ + AY
Sbjct: 916 DLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALAY 975
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
RG + +++ A+ D S
Sbjct: 976 LGRGGIYSLQQKYELALADYS 996
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY A+S +++ +K +P Y A RG + Q++ E A++D+++AI N
Sbjct: 693 NRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKYELALADYSKAIDIN 752
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG L + A+ D SKA++ PN A + RG + + ++ A+ D
Sbjct: 753 PNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYNRGNLYSDLQKYDLALSD 812
Query: 506 LSACVKLDKENKSAYTYLG----------LALSSIGEYKKAEEA-----HLKAIQLDRNF 550
S + ++ Y G LALS +Y KA + + KAI ++ N+
Sbjct: 813 YSKAIDINPNYAETYNNRGNLYKDLQKYDLALS---DYTKAIDILALSDYTKAIDINPNY 869
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y + + AL + + I+ +++ Y+ RG L L ++ A+ D S
Sbjct: 870 AVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYS 928
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + KY A++ F++ L+ +P Y A GRG +Q++ E A++D+ +AI
Sbjct: 1044 LGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALADYNKAIDI 1103
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG + A+ D +KA+E + A RG + + + A+
Sbjct: 1104 NPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALA 1163
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + AY+ G +Y+ A + KA+ ++ N EA+ Y
Sbjct: 1164 DFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQ 1223
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLH-------GLGQHKKAIK 606
E AL + + I+ +AY+ RG L + L + KAIK
Sbjct: 1224 QKDELALADFNKAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIK 1272
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+K+ + +K+I +D +L+ RG ++ KY A++ F++ ++ D A
Sbjct: 1122 QKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSN 1181
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q++ E A++D+ +A+ NP+ EA+ RG + A+ D +KA+E P
Sbjct: 1182 RGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEINP 1241
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + RG + + + + A+ D + +K++K A +GL G +A +
Sbjct: 1242 NLVEAYNNRGNLYYLQQKYELALSDYNKAIKINKNAWFAMMGIGLVKYEQGSISEAIKQW 1301
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA+ ++ E L + +KAL+ + L I+ + + L+ +L
Sbjct: 1302 EKALIINNQSAEIQLALAVAFYHQGEKDKALKLAESALSINSQLANIDFLKKIL 1355
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-----------FQRELEA-AISDFTEAIQ 443
KY A+S + + + +P Y E RG + + ++ A+SD+T+AI
Sbjct: 805 KYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYTKAIDILALSDYTKAID 864
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ A+ RG + A+ D SKA++ PN A+ + RG + + ++ A+
Sbjct: 865 INPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLAL 924
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D S + ++ AY GL +Y+ A KAI+L+RN A+ Y
Sbjct: 925 SDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALAYLGRGGIYSL 984
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E AL + L I+ ++AY RG + +++ A+ D S
Sbjct: 985 QQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYS 1030
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 341 STESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEG 395
+ E SKL+ + N+ +K+ + +K+I +D +L+ RG +
Sbjct: 1134 AIELDSKLAMAYSNRGNIYND---QQKYELALADFNKAIELDSKLAMAYSNRGNLYYLQQ 1190
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A++ +++ L +P EA +GRG +Q++ E A++DF +AI+ NP+ EA+ R
Sbjct: 1191 KYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEINPNLVEAYNNR 1250
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A+ D +KA++ N+ + G+V ++ + A++ + ++ +
Sbjct: 1251 GNLYYLQQKYELALSDYNKAIKINKNAWFAMMGIGLVKYEQGSISEAIKQWEKALIINNQ 1310
Query: 516 NKSAYTYLGLALSSIGEYKKA 536
+ L +A GE KA
Sbjct: 1311 SAEIQLALAVAFYHQGEKDKA 1331
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + SK+I ++ + RG + KY A+S + + + +P Y A
Sbjct: 884 KKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYSKAIDINPNYAVAYNN 943
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q++ E A++D+ +AI+ N + A+ RG + + A+ D SKALE P
Sbjct: 944 RGLLYLLQQKYELALADWNKAIELNRNLALAYLGRGGIYSLQQKYELALADYSKALEINP 1003
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ RG + + + A+ D S ++++ AY G +Y+ A
Sbjct: 1004 NLAEAYLGRGSIYSLQQKYELALADYSKALEINPNLAEAYLGRGGIYLLQQKYELALADF 1063
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KA++++ N+ A+ + Y E AL + + I+ ++ AY+ RG + + +
Sbjct: 1064 NKALEINPNYAMAYFGRGELYYYQKKYELALADYNKAIDINPNYANAYNNRGSIYYNQQK 1123
Query: 601 HKKAIKD 607
++ A+ D
Sbjct: 1124 YELALAD 1130
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 432 EAAISDFTEAIQSNPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNSAD----- 484
E AI F EAI+ N AW +G A LG+ AI+ L +A+ P D
Sbjct: 561 EEAIKAFDEAIKQNDPKNVYLAWYGKGLALGYLGKYQTAIEALQQAINTLPKREDLKNFH 620
Query: 485 --ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
IL ++ +V +++ A+ ++ + L N + Y + LS + Y + A +
Sbjct: 621 SSILQKQSVVYRYLENYEQALTVINQAISLFPNNPNHYNEKYVVLSQLKRYDEGLAAITQ 680
Query: 543 AIQLDRNFLEAW-GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
AI L AW G+ Y +L + AL + + I+ ++ AY+ RG L ++
Sbjct: 681 AIDLAPR--AAWYGNRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKY 738
Query: 602 KKAIKDLS 609
+ A+ D S
Sbjct: 739 ELALADYS 746
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAK-----LCSLRNWSKAIRILDSLLAQ 65
Y K + + ++ + +DS +A A + R + +L +++KAI LDS LA
Sbjct: 1119 YNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIE-LDSKLAM 1177
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR Y + ++ + D +KAL ++P L +AY+ +G + + E AL+
Sbjct: 1178 AY-----SNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALAD 1232
Query: 126 WEKGYE 131
+ K E
Sbjct: 1233 FNKAIE 1238
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +W+KAI L+ LA +Y R YS + ++ + D KAL+++P L +AY
Sbjct: 956 LALADWNKAIE-LNRNLALAY-----LGRGGIYSLQQKYELALADYSKALEINPNLAEAY 1009
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
+ +G +S + E AL+ + K E
Sbjct: 1010 LGRGSIYSLQQKYELALADYSKALE 1034
>gi|255525769|ref|ZP_05392699.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296186324|ref|ZP_06854728.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255510502|gb|EET86812.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296049125|gb|EFG88555.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 257
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I +T AI N +A+ RG+ +L E +AI+D + +E P D + + +
Sbjct: 38 IKFYTMAINMNSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVAYY 97
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +++ A++ + ++LD EN +AY GL + +Y KA + K I L+ EA+
Sbjct: 98 ENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAY 157
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ Y + KA+E + + ID ++ AY+ RG + +G++K+AI+D
Sbjct: 158 FNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIED 210
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RG + +Y+ AI F ++++ +P +A A RE E A+ +T+
Sbjct: 52 IDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVAYYENREYEKALDSYTK 111
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ + A+ RG A + +AI+D K + P + RGI+ + +N
Sbjct: 112 VIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAYFNRGIIYYNTGKYN 171
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
AVED + +++D + + AY G A IG+YK+A E ++K I+L+ N E + +++
Sbjct: 172 KAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYYNIS 229
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I + + + Y +A RG +E AI DF I+ NP +A+ A
Sbjct: 38 IKFYTMAINMNSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVAYY 97
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
E +A+ +K +E + + + RG+ ++ A++D + L+ E+K AY
Sbjct: 98 ENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAY 157
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-TQFYQDLANSEKALECLQQVLY 579
G+ + G+Y KA E + KAI++D + +A+ + T FY + ++A+E +V+
Sbjct: 158 FNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYL-IGKYKEAIEDYIKVIK 216
Query: 580 IDKRFSKAYHLRGLL 594
++ S+ Y+ L+
Sbjct: 217 LNPNSSEIYYNISLI 231
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + KY AI F + + +P EA RG + A+ D+T+AI+
Sbjct: 124 FNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAYFNRGIIYYNTGKYNKAVEDYTKAIEI 183
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ +A+ RG A +G+ EAI+D K ++ PNS++I + ++
Sbjct: 184 DSKYEDAYNNRGTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYYNISLI 231
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+A +Y A+ + ++++ D A RG Q + AI DF + I NP
Sbjct: 93 AVAYYENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPE 152
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG G+ +A++D +KA+E + D + RG + + A+ED
Sbjct: 153 DKEAYFNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIEDYI 212
Query: 508 ACVKLDKENKSAYTYLGL 525
+KL+ + Y + L
Sbjct: 213 KVIKLNPNSSEIYYNISL 230
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 73/145 (50%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E I+ + A+ D RG V K+++ A++D ++L+ ++K AY + +A
Sbjct: 36 EKIKFYTMAINMNSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVA 95
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+KA +++ K I+LD A+ + Y+ KA++ + + ++ +
Sbjct: 96 YYENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKE 155
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSG 611
AY RG++ + G++ KA++D +
Sbjct: 156 AYFNRGIIYYNTGKYNKAVEDYTKA 180
>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 784
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++R + G A+ FD+ + +P A RG + EAAI DF+EA
Sbjct: 31 DALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSEA 90
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P EA+ +RG + GE AIQD S+A+ P ++R + D
Sbjct: 91 IELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHPG 150
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D S + ++ +AY G+ LS GE +KA E AI+ + +A+ H
Sbjct: 151 ALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCL 210
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ +EKA + + L D AY + LG K+A D+SS S T
Sbjct: 211 AQMGEAEKASKDFSEALLHDPNHQAAY----TRAYALGMLKEAPVDVSSPSST 259
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ALI R RA +L+ A+ DF EAI NP+ A+ RG +LG+ AI D S+
Sbjct: 30 PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E P+ + +RG + +F A++D S ++++ AY + + +G++
Sbjct: 90 AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A + I A+ F EKA+E + + R + AY RG
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209
Query: 595 LHGLGQHKKAIKDLS 609
L +G+ +KA KD S
Sbjct: 210 LAQMGEAEKASKDFS 224
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A++ F Q++ P A RG + ELE AI DFT AI+ NP +A+
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +GE+ +A +D S+AL +PN + R K+ A V +
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKE---------APVDVSS 255
Query: 515 ENKSAYTY--------LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +A Y + +++ + + +E H + L+ +E + +
Sbjct: 256 PSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHPATVPLEPTSMEGFFERANNRIQRGD 315
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ +++ D S+AY+ RG L LG+ + A++DL+
Sbjct: 316 LDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQAAMEDLN 358
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ AI F ++ +P +A RG A E E A DF+EA+ +P
Sbjct: 172 RGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231
Query: 447 SAGEAWKRRGQARAALGE--------------------------SVEAIQDLSKALE--- 477
+ A+ R A L E SVE ++D E
Sbjct: 232 NHQAAYTR-AYALGMLKEAPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHP 290
Query: 478 ----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
EP S + ER + D + A+ D S + D EN AY G +L ++GE
Sbjct: 291 ATVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDNDPENSQAYYQRGQSLGALGES 350
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ A E +AI R + + G + F +L+ + LE L+Q L
Sbjct: 351 QAAMEDLNQAIHWAR--VHSLGLIRDFSGELSTT---LETLKQDL 390
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + ++++P+ EA RG +RA +L+ AI D++ I+ +P+ EA+ +R +
Sbjct: 513 AIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRARCL 572
Query: 460 AALGESVEAIQDLSKALEFEP 480
+ALG+ A DL+ + P
Sbjct: 573 SALGDEAAAQADLNHVIRQSP 593
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI+ T AI+ NP EA+ RGQ+RA G+ AI+D S+ + +PN+ + +R
Sbjct: 510 LERAIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRA 569
Query: 491 IVNFKFKDFNAAVEDLSACVK 511
D AA DL+ ++
Sbjct: 570 RCLSALGDEAAAQADLNHVIR 590
>gi|434387381|ref|YP_007097992.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018371|gb|AFY94465.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 586
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 34/266 (12%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K V+ L+ I + N+G Y ++ D+ + DP RG A+ + + A
Sbjct: 256 AKPKPVEDYLANAILEENKGNYRGMLTEADRAIAIDPNNARLYYIRGVAKFQLDDKKGAA 315
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+T++I NP +A+ R ARA LG A++D ++A+ +P A R + FK
Sbjct: 316 DDYTKSIALNPRYPQAYSNRAYARAELGNPNGALEDTNRAIALDPKFALAYVNRSLAKFK 375
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW- 554
F DF +ED + + +D AY+ LA S +G+ + A E +A+ +D EA+
Sbjct: 376 FGDFKGVIEDTTRAIAIDPAIAIAYSNRSLAKSELGDQRGAIEDANRALAIDAKLGEAYI 435
Query: 555 --------------------------GHLTQFYQD-------LANSEKALECLQQVLYID 581
L Q + + L +++ A+ + + ++
Sbjct: 436 NRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGDTQGAIASSNRAISLN 495
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ Y +RG + LG HK AI+D
Sbjct: 496 PNLPEGYFVRGFAKYQLGDHKGAIED 521
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI+++ R +R A+ G A+ ++ + DP + A + R A+ +
Sbjct: 319 TKSIALNPRYPQAYSNRAYARAELGNPNGALEDTNRAIALDPKFALAYVNRSLAKFKFGD 378
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ I D T AI +P+ A+ R A++ LG+ AI+D ++AL + + RG
Sbjct: 379 FKGVIEDTTRAIAIDPAIAIAYSNRSLAKSELGDQRGAIEDANRALAIDAKLGEAYINRG 438
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ N + D AA+ D L A++ +G+A +G+ + A + +AI L+ N
Sbjct: 439 LANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGDTQGAIASSNRAISLNPNL 498
Query: 551 LEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E + + F YQ L + + A+E + + + F++AY R + LG +K+ + DL
Sbjct: 499 PEGY-FVRGFAKYQ-LGDHKGAIEDANRTISLRPTFAQAYANRAIARLQLGDNKQGLADL 556
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D A+ + GEA+ RG A LG++ AI D + +P A G+
Sbjct: 415 GAIEDANRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVA 474
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ D A+ + + L+ Y G A +G++K A E + I L F +
Sbjct: 475 KLQLGDTQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQ 534
Query: 553 AWGH-------LTQFYQDLANSEKALECLQQ 576
A+ + L Q LA+ K+ E +Q
Sbjct: 535 AYANRAIARLQLGDNKQGLADLRKSAELFKQ 565
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++++++D +L +RG+A + G +AI F++ P +A G A+ +
Sbjct: 421 NRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGD 480
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+ AI NP+ E + RG A+ LG+ AI+D ++ + P A R
Sbjct: 481 TQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQAYANRA 540
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKE 515
I + D + DL +L K+
Sbjct: 541 IARLQLGDNKQGLADLRKSAELFKQ 565
>gi|425466451|ref|ZP_18845749.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
gi|389831011|emb|CCI26579.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
Length = 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ + +FS+A++ +G++L L + +A++ + ++
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKA 566
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + L+
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G +L + + A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E Q + + +A+ +G LLH + + ++AI R
Sbjct: 558 EAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARR 599
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 113/285 (39%), Gaps = 40/285 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L + +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLS------SGSRTMMPHLIWNLTRWRNL 629
G LGQ+++AI+ S R + TRW+ L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQEL 689
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + K D E T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDSEEQ 705
>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
Length = 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S ++Q + P Y A G+G ++ + A++ + +AIQ P EAW R
Sbjct: 344 RYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EAI KAL+ N ++ + RG K ++ A++ ++ + +
Sbjct: 404 GFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSD 463
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ GLAL S+ EY +A A+ KAI++ ++ AW +L +L E A +
Sbjct: 464 AYESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + ++ A+ RG +L L ++ +A++ +
Sbjct: 524 KAVQYKTDYAIAWLSRGNVLIILRRYPEALESFN 557
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 40/258 (15%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I D+ + RG + N +Y+ AI+ FD+ L+ + YPE RG A
Sbjct: 382 ALTAYDKAIQIQPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAF 441
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ ++ + AI + +AI+ N A E++ +G A ++ E EAI +KA+E + +
Sbjct: 442 SNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSD---- 497
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ER N LG +L ++ Y+ A +A+ KA+Q
Sbjct: 498 -YERAWYN-----------------------------LGNSLVNLNRYEDAFKAYDKAVQ 527
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ AW L +ALE QV+ + +A++ RG H ++ +AI
Sbjct: 528 YKTDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAI 587
Query: 606 KDLSSGSRTMMP--HLIW 621
+ + T+ P + IW
Sbjct: 588 ESYKKAA-TIKPSNYEIW 604
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNE 394
+SD+ ES +KE NEA + +K+ I D+ + G + VN
Sbjct: 461 NSDAYESFYNKGLALQSMKEY-NEA-------INAYNKAIEIKSDYERAWYNLGNSLVNL 512
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y A +D+ ++ Y A + RG R A+ F + I+ NP+ +AW
Sbjct: 513 NRYEDAFKAYDKAVQYKTDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYG 572
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG ++ EAI+ KA +P++ +I + G + + + A+ + V+
Sbjct: 573 RGWSQHQNQRYAEAIESYKKAATIKPSNYEIWYSLGNSQYILQQYQEAIASYNKAVRYRP 632
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ ++ G AL S+ +YK+A ++ +AI+ ++ +A
Sbjct: 633 KHIESWYSRGNALFSLKQYKEAIASYEQAIKHKPDYSQA 671
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 74/152 (48%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A+ +A++ P+ A +G F+ K + A+ +++
Sbjct: 334 KKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQ 393
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G +L ++ Y +A + KA+QL+ N+ E W + + +L ++A++
Sbjct: 394 PDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKS 453
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + ++++ +GL L + ++ +AI
Sbjct: 454 YDKAIEFNSDAYESFYNKGLALQSMKEYNEAI 485
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A + +Y AI+ +++ ++ Y A G + E A + +A+Q
Sbjct: 470 NKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKAVQYK 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
AW RG L EA++ ++ ++F PN+ + RG + + + A+E
Sbjct: 530 TDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAIES 589
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GH----LT 558
+ N + LG + + +Y++A ++ KA++ +E+W G+ L
Sbjct: 590 YKKAATIKPSNYEIWYSLGNSQYILQQYQEAIASYNKAVRYRPKHIESWYSRGNALFSLK 649
Query: 559 QFYQDLANSEKALE 572
Q+ + +A+ E+A++
Sbjct: 650 QYKEAIASYEQAIK 663
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F+ + + A+ V + + A+ G L + +Y+ A A+
Sbjct: 327 NNATDLAKKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAY 386
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +++EAW Q+L +A+ + L +++ + + ++ RG L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446
Query: 601 HKKAIK 606
+ +AIK
Sbjct: 447 YDQAIK 452
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L + KAI+I Q ++ R F L+ + I DKALQL+ + +
Sbjct: 382 ALTAYDKAIQI------QPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWN 435
Query: 108 LKGCAFSALGRKEEALSVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
+G AFS L + ++A+ ++K YE ++ L+ E E + A + +
Sbjct: 436 ARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIK 495
Query: 161 CEYD-----VSNSMSSLTVSESGLNANDK 184
+Y+ + NS+ +L E A DK
Sbjct: 496 SDYERAWYNLGNSLVNLNRYEDAFKAYDK 524
>gi|256839603|ref|ZP_05545112.1| TPR repeat-containing protein [Parabacteroides sp. D13]
gi|256738533|gb|EEU51858.1| TPR repeat-containing protein [Parabacteroides sp. D13]
Length = 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS I+ D L+ G + Y +I F+Q++K P E R A+ + +
Sbjct: 15 ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L +
Sbjct: 75 GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ KD+N A + + + Y G G+ KA + KAI++D +
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----L 608
A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254
Query: 609 SSGSRTMMPHLIWNLTRWR 627
S R ++ L R++
Sbjct: 255 SMDRRNLIARFNRGLLRFQ 273
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++LD Y GL + + + A + + I +DR L A + +
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR---TMMPHLI 620
++ +A+E V+ + AY+ R LL G ++ A++D + T +P +
Sbjct: 276 DNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALE 477
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGE 691
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D+ N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI N G++ A+ +++ L+ DP+ E G LE A+ EA + NP
Sbjct: 113 GITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W G LG+ ++ + LE +P SAD + RGIV + + AVE
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYD 232
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + ++ SA+ G AL+++G+ + A E++ K ++++ + ++ Y++L
Sbjct: 233 YAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A++ Q L D +++A++ G L + ++AI
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAI 330
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 85/162 (52%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+A +AW RRG + LG EA+Q +AL P + L GI F A++
Sbjct: 68 HPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQ 127
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D N Y LG+ L + ++A +A +A +L+ + E W L Y L
Sbjct: 128 AYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRL 187
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ E++L C + L +D + A++ RG++L+ +G++++A++
Sbjct: 188 GDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVE 229
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASA 400
S F D L+E + +F + R+ + D + RGI + G++ A
Sbjct: 32 SSAYFDSDTLEEIATYYYERGRFEDALGVIDRLLALHPTASDAWMRRGILLSHLGRHEEA 91
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ +++ L +P E L+ G E A+ + A+Q +P E + G
Sbjct: 92 LQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLE 151
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ EA+Q L +A P+ ++ +E G + D ++ ++LD + A+
Sbjct: 152 RMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAW 211
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+ L+ +G Y++A E++ AI + +F AW + +L + A+E ++VL I
Sbjct: 212 YNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEI 271
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ Y+ L L +++ AI+
Sbjct: 272 EGGDPATYYNIALAYEELQEYETAIQ 297
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 355 LKETSNEAKRNKKFCVTRISKSK----------SISVDFR---LSRGIAQVNEGKYASAI 401
L S +A N+ + R+ + + +I DF +RG A N G AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAI 262
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
++++L+ + P A +E E AI F A++ +P+ EAW G A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
L EAI + +A+ +P +++ + + + + A++ ++LD +N+ A+
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L G ++A +A+ +A+ L+ + A+ + L SE+ + L+ L +D
Sbjct: 383 DYAETLLEAGYVEEALQAYRQALTLNPD-ARAYIRQARALLALGRSEEGIRSLKMALRLD 441
Query: 582 K 582
Sbjct: 442 P 442
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 35/248 (14%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+++ +D+ L+ DP +A RG A+ + AI G AW RG A
Sbjct: 193 SLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNAL 252
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG+ AI+ K LE E + + + +++ A++ ++ D A
Sbjct: 253 TNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEA 312
Query: 520 YTYLGL---ALSSIGE-------------------YKKAE------------EAHLKAIQ 545
+ LG AL E Y KA+ +++ + I+
Sbjct: 313 WYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIE 372
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD +AW + + E+AL+ +Q L ++ ++AY + L LG+ ++ I
Sbjct: 373 LDPQNRDAWLDYAETLLEAGYVEEALQAYRQALTLNPD-ARAYIRQARALLALGRSEEGI 431
Query: 606 KDLSSGSR 613
+ L R
Sbjct: 432 RSLKMALR 439
>gi|425442275|ref|ZP_18822529.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
gi|389716789|emb|CCH99016.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
Length = 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQA LG++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 407 RGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L +I +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 467 NDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+A++ +G++L L + +A++ + ++
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATK 565
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A +++G +D+ AV+ + L+
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH + + ++AI R
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARR 599
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 113/285 (39%), Gaps = 40/285 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + + + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L + +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLS------SGSRTMMPHLIWNLTRWRNL 629
G LGQ+++AI+ S R + TRW+ L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQEL 689
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + K D E T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705
>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 747
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ ++ S++ RG+ Q G++ A+ F + L+ DP +L G+G A R+
Sbjct: 366 QVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLNGKGVALNRLRQN 425
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALG---------------------------- 463
A+ F AI P AW +G A +ALG
Sbjct: 426 RDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSL 485
Query: 464 ------ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+ EA+Q +AL +EPNSA + +G++ + A + +K D
Sbjct: 486 ILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFA 545
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A +G L + ++K A + + +A+Q D N+++ W Q Q+L N ++LE ++
Sbjct: 546 PALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERA 605
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
ID F+ A+ + +L + ++ A+
Sbjct: 606 TQIDPSFAPAWLGKATVLSRMERYDMAL 633
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 93/179 (51%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
QR + A+ + + I+++ +AW+ RG +A G+ EA+Q ++AL+ +P+ L+
Sbjct: 354 QRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLN 413
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G+ + + A++ + L+ N A+ G ALS++G ++A A A+ D
Sbjct: 414 GKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFD 473
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AW + + + + E+AL+ +Q L + + ++ +GL+L +G+ ++A +
Sbjct: 474 PRMALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQ 532
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+ + G+ A + + LK D + AL G G Q++ ++A+ ++ A+Q +
Sbjct: 516 SKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFD 575
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + W+RRGQ LG +++ +A + +P+ A + V + + ++ A+
Sbjct: 576 PNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDMALNA 635
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ + +A G AL +G Y A A+ A++++ + A
Sbjct: 636 YEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNPRMVSA 683
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 100/263 (38%), Gaps = 36/263 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G A G A++ FD L DP A + R+ E A+ +A+
Sbjct: 448 GKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQALSYE 507
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ W +G +G EA Q +AL+ + A L+ G V + + F +A+++
Sbjct: 508 PNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDN 567
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------- 554
++ D + G L +G Y+++ E+ +A Q+D +F AW
Sbjct: 568 YDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRME 627
Query: 555 ------------------------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G Y+ L N AL L ++ R A H
Sbjct: 628 RYDMALNAYEEALRRNPSLPAALNGKGNALYR-LGNYSAALSAYDNALKVNPRMVSALHN 686
Query: 591 RGLLLHGLGQHKKAIKDLSSGSR 613
+ L+L LG++ +A+ S R
Sbjct: 687 KSLILKLLGRYNEALAAAESAIR 709
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y ++ F++ + DP + A +G+ T + + A++ + EA++ NPS A
Sbjct: 593 GNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDMALNAYEEALRRNPSLPAALNG 652
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G A LG A+ AL+ P LH + ++ +N A+ + ++L
Sbjct: 653 KGNALYRLGNYSAALSAYDNALKVNPRMVSALHNKSLILKLLGRYNEALAAAESAIRL 710
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
Y + + + D+++R DS+ A A R L +L+++++A+++ L
Sbjct: 352 YAQRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDL--- 408
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+ + + ++L ++ ++ D+A+ L+P A+ KG A SALG E+AL+
Sbjct: 409 ---VTSLNGKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNA 465
Query: 126 WEKGYEH----AL---HQSADLKQFLELEELLTAAKQ 155
++ AL ++S L+Q + EE L A++Q
Sbjct: 466 FDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQ 502
>gi|425455181|ref|ZP_18834906.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9807]
gi|389803962|emb|CCI17158.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9807]
Length = 317
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ + + L GI Q+ G Y A+ F+Q L+++ A R + ++ A D
Sbjct: 45 VHLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAWQDC 104
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T ++Q A+ RG A LG+ +A+ D ++++ +P + RG+V K+
Sbjct: 105 TRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNESIRLKPTYYQAYYNRGLVQAAMKN 164
Query: 499 FNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N A
Sbjct: 165 YPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNNASA 224
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ +L L ++++ L Q + ID ++ AY RGLL H LG ++ A+ DL+ G+
Sbjct: 225 YYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQGAN 284
Query: 614 TM 615
+
Sbjct: 285 HL 286
>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 286
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A G+ +A+ F + + DP + A IGR Q +L A++D AI+
Sbjct: 107 NRALAYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLA 166
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + EA+ RG R G++ EAI D + A++ P A RG ++ A+ED
Sbjct: 167 PESAEAYHARGLVRQKQGQNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIED 226
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+A + ++ ++ S++ Y GLA K+A E++ +A +LD N
Sbjct: 227 FNAALNVNSKDASSWAYRGLAYEKTNRRKEANESYQQAARLDPN 270
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A G++ AIS F + ++ DP A R A +AA+ DF++AI +
Sbjct: 72 VTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIAT 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ R A G+ A+ DL+ A+ P SA+ H RG+V K A+
Sbjct: 132 DPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIG 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + + + Y G +L S+ +Y KA E A+ ++ +W + Y+
Sbjct: 192 DFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAYEKT 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A E QQ +D + A G + GL
Sbjct: 252 NRRKEANESYQQAARLDPNNAVAKQGVGRMQGGL 285
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P A + RG A A + AISDF++AIQ +P++ A+ R A
Sbjct: 54 IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G + A+QD SKA+ +PN + R + D N A+ DL+ ++L E+ AY
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEA-WGHLTQFYQDLANSEKALECLQQVL 578
GL G+ +A AI DRN F+ A + Q L +KA+E L
Sbjct: 174 HARGLVRQKQGQNPEAIGDFAAAI--DRNPFVAAPYAARGQSLISLNQYDKAIEDFNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ + + ++ RGL + K+A + +R
Sbjct: 232 NVNSKDASSWAYRGLAYEKTNRRKEANESYQQAAR 266
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + LS + + + AY G A + G++ +A KAIQLD N A+ +
Sbjct: 51 NVNIASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++ A++ + + D FS AY R L G A+ DL+
Sbjct: 111 AYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLN 160
>gi|390441737|ref|ZP_10229773.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
gi|389834944|emb|CCI33899.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
Length = 266
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + Q++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L S G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAVGMDTRY 239
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S +T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 55 AESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTAL 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 115 EGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWA 174
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL---LHGLGQHKKA 604
+L +L + E +Q++ I +++ +R L L GQ +A
Sbjct: 175 QANLALALYELG---RYPEAVQKMRNIARKYPMFPDVRAALTAVLWSQGQQGEA 225
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|166362748|ref|YP_001655021.1| hypothetical protein MAE_00070 [Microcystis aeruginosa NIES-843]
gi|425441994|ref|ZP_18822255.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9717]
gi|166085121|dbj|BAF99828.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
gi|389717135|emb|CCH98726.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9717]
Length = 266
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + Q++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S +T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 55 AESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTAL 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 115 EGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWA 174
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +L +A++ ++ + F +L GQ +A
Sbjct: 175 QANLALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|422304729|ref|ZP_16392069.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
gi|389790038|emb|CCI14001.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
Length = 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + Q++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWSQLVAKFPTNPAVWSNRGNARVNLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+VN K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVNLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L S G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAVGMDTRY 239
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
YA + +I ++ ++E + E + T + + E+ S +NP+ W RG
Sbjct: 22 YADSPTISEEQIREGEVIAEKAL-EATEKGDYAQAESYWSQLVAKFPTNPAV---WSNRG 77
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR L + +AI D ++A+ P++ D RG + A+ D + ++LD +
Sbjct: 78 NARVNLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPND 137
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G A +G+++ A + + +A QL NF A +L +L + E +Q+
Sbjct: 138 AFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELG---RYPEAVQK 194
Query: 577 VLYIDKRFSKAYHLRGLL---LHGLGQHKKA 604
+ I +++ +R L L GQ +A
Sbjct: 195 MRNIARKYPMFPDVRAALTAVLWSQGQQGEA 225
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|440754174|ref|ZP_20933376.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440174380|gb|ELP53749.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 311
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q L+ + A R + ++ A
Sbjct: 36 AQSVHLSYWLRSGIEQLEAGNYQQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAW 95
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 96 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQSA 155
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 156 RKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 215
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L E+++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 216 ASAYYNLACTAHQLGEYERSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 275
Query: 611 GSRTM 615
G+ +
Sbjct: 276 GANHL 280
>gi|124024556|ref|YP_001018863.1| hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
9303]
gi|123964842|gb|ABM79598.1| Hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
9303]
Length = 539
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ R A+ + Y AI+ + + ++ P + RG A+ ++ + AI+DF
Sbjct: 291 SVEGYFLRAYAKYDLRDYQEAIADYTKTIEIHPQNTVSYNNRGNAKQKLKDHQGAIADFN 350
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI +P A+ RG A+ LG+ AI D +KA+ P + RG K KD
Sbjct: 351 KAIAIDPQNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKDH 410
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D S + ++ +N +YT G +G+Y+ A KAI++ + A+ +
Sbjct: 411 QGAISDYSKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFNKAIEIKPDSANAYNNRGN 470
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
DL + + A+ + + I+ + + ++ RG+ +G K A D
Sbjct: 471 AKDDLGDHQGAIADYNKAIEINPQDAVSHANRGIAKELVGDLKGACAD 518
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I++D + +RG A+ + G Y AI+ +++ + +P A RG A+ ++
Sbjct: 350 NKAIAIDPQNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKD 409
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AISD+++AI NP ++ RG + LG+ AI D +KA+E +P+SA+ + RG
Sbjct: 410 HQGAISDYSKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFNKAIEIKPDSANAYNNRG 469
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A+ D + ++++ ++ ++ G+A +G+ K A KA L
Sbjct: 470 NAKDDLGDHQGAIADYNKAIEINPQDAVSHANRGIAKELVGDLKGACADWRKASSLGVQV 529
Query: 551 LEAW 554
+ +W
Sbjct: 530 VASW 533
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E + R A+ L + EAI D +K +E P + + RG K KD A+ D +
Sbjct: 293 EGYFLRAYAKYDLRDYQEAIADYTKTIEIHPQNTVSYNNRGNAKQKLKDHQGAIADFNKA 352
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ +D +N +AYT G A +G+Y+ A + KAI ++ A+ + Q L + +
Sbjct: 353 IAIDPQNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKDHQG 412
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + I+ + + +Y RG LG ++ AI D +
Sbjct: 413 AISDYSKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFN 452
>gi|434385392|ref|YP_007096003.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428016382|gb|AFY92476.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 302
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + + G SAI+ +D+ ++ +P Y +A RG A+ +L AI+D+ AI +
Sbjct: 45 QGINKHSSGDLVSAIAEYDRAIELNPNYAKAYNNRGLAKGQLGDLAGAIADYNRAINLDR 104
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG+AR G AI D S A++ P+ A + RG+ D +A+ D
Sbjct: 105 NYAKAYYNRGRARVETGNIAPAIADYSWAIKHAPHYAKAYYYRGLAKLNVDDKQSAIADF 164
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ AY + G +G+ A ++I++ + A H ++ +
Sbjct: 165 DRAIEVSPNYAPAYYHRGNTKHDVGDIVGAIADFDRSIEIAPGEIGAIYHRGTIKGEIGD 224
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A+ +VL +D +++AY+ R L
Sbjct: 225 NAGAIYDYDRVLALDPNYARAYYNRAL 251
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A AI+ +++ + D Y +A RG AR + AI+D++ AI+
Sbjct: 78 NRGLAKGQLGDLAGAIADYNRAINLDRNYAKAYYNRGRARVETGNIAPAIADYSWAIKHA 137
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A+ + + AI D +A+E PN A + RG D A+ D
Sbjct: 138 PHYAKAYYYRGLAKLNVDDKQSAIADFDRAIEVSPNYAPAYYHRGNTKHDVGDIVGAIAD 197
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++ A + G IG+ A + + + LD N+ A+
Sbjct: 198 FDRSIEIAPGEIGAIYHRGTIKGEIGDNAGAIYDYDRVLALDPNYARAY 246
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L +AI+++ AI+ NP+ +A+ RG A+ LG+ AI D ++A+ + N A + R
Sbjct: 54 DLVSAIAEYDRAIELNPNYAKAYNNRGLAKGQLGDLAGAIADYNRAINLDRNYAKAYYNR 113
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + A+ D S +K AY Y GLA ++ + + A +AI++ N
Sbjct: 114 GRARVETGNIAPAIADYSWAIKHAPHYAKAYYYRGLAKLNVDDKQSAIADFDRAIEVSPN 173
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ H D+ + A+ + + I A + RG + +G + AI D
Sbjct: 174 YAPAYYHRGNTKHDVGDIVGAIADFDRSIEIAPGEIGAIYHRGTIKGEIGDNAGAIYDY 232
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 424 ARAFQRELEAAISDFTEAIQSNP-----SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
A A R+ + S ++ I S P + + R+G + + G+ V AI + +A+E
Sbjct: 9 ADAAARQPQGTASKASDRIDSQPFDLDTKQVKNYNRQGINKHSSGDLVSAIAEYDRAIEL 68
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PN A + RG+ + D A+ D + + LD+ AY G A G A
Sbjct: 69 NPNYAKAYNNRGLAKGQLGDLAGAIADYNRAINLDRNYAKAYYNRGRARVETGNIAPAIA 128
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ AI+ ++ +A+ +Y+ LA + + A+ + + + ++ AY+ RG
Sbjct: 129 DYSWAIKHAPHYAKAY-----YYRGLAKLNVDDKQSAIADFDRAIEVSPNYAPAYYHRGN 183
Query: 594 LLHGLGQHKKAIKDL 608
H +G AI D
Sbjct: 184 TKHDVGDIVGAIADF 198
>gi|186686063|ref|YP_001869259.1| hypothetical protein Npun_R6026 [Nostoc punctiforme PCC 73102]
gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
Length = 381
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 368 FCVTRISKSKSISVDFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
F +++ +IS D +G+ + N A F Q L+ DP AL G
Sbjct: 55 FPGSKLLAETAISQDLEAASFFQQGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGN 114
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
Q L+ A+ ++TEAI+ NP+ EA+ G G+ AI ++L +P
Sbjct: 115 IFMEQNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKV 174
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
L+ G+V ++ + A+ + LD N +AY L +AL G+ ++A + +A
Sbjct: 175 AALYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQA 234
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+QLD A+ ++ + +A+ +Q + ++ + + AY+ G+ L+ G KK
Sbjct: 235 LQLDPQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKK 294
Query: 604 A 604
A
Sbjct: 295 A 295
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G R +++L+ A F +A+Q +PS G A G A+Q+ ++A+ P
Sbjct: 78 QGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGNIFMEQNRLDVALQEYTEAIRINP 137
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N ++ + G+V + +AA+ + +D +A LGL L + +A +
Sbjct: 138 NFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAIAVY 197
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI LD + A+ +L Q +E+A+ +Q L +D + + AY+ LL GQ
Sbjct: 198 QQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAIQGQ 257
Query: 601 HKKAI 605
+AI
Sbjct: 258 ASEAI 262
>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
Length = 607
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG GKY AI + + +K DP A RGTA AA+SD TEA++
Sbjct: 31 LERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKR 90
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ RG A A LG +AI DL+ +E P+ A + R + K F+ A+
Sbjct: 91 DPNNATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKALA 150
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
D + ++LD ++ +A G A ++ G++ KA + +A++LD
Sbjct: 151 DYNEALRLDPKHTNALVGRGTAHATAGQFDKALADYNEALRLD 193
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG + E AI D+T AI+ +P + A+ RG A A G A+ DL++AL+
Sbjct: 30 LLERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALK 89
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PN+A + RG+ A+ DL+ +++ + A+ LA + ++ KA
Sbjct: 90 RDPNNATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKAL 149
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ +A++LD A + +KAL + L +D + S A+ R LL
Sbjct: 150 ADYNEALRLDPKHTNALVGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFR 209
Query: 598 LGQHKKAIKDLSSGSR 613
G+ + DL R
Sbjct: 210 QGRWAATLTDLDEAVR 225
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG +G++ A++ +D + DP RG+ R+ + AI D TE+I+
Sbjct: 407 FERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRL 466
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFKFKDF 499
+P+ A+ RG R +G A+ D +AL +P A L RG++ + +D
Sbjct: 467 DPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGDAALRDA 526
Query: 500 NAAVEDLSAC 509
A+ED A
Sbjct: 527 TKALEDAKAA 536
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG A G++ A++ +++ L+ DP A R Q A ++D EA++
Sbjct: 167 VGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAATLTDLDEAVRL 226
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E R R E EA++D +A+ P + D R V+ +++AA+
Sbjct: 227 APEKAEYLLFRSTCRMLRSELDEALKDADQAVRSAPRNPDARVHRSSVHLARSNWDAALR 286
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
DL+ + LD ++ A+ L+S E K + A
Sbjct: 287 DLTEVILLDPNHRFAFLNRAWVLASCPEAKHRDPAQ 322
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G A+A+S + LK DP RG A A E AI+D T+ I+
Sbjct: 66 ARGTAHQANGNDAAALSDLTEALKRDPNNATTRYYRGLAYAHLGWPEKAIADLTDFIEMT 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A + + +A+ D ++AL +P + L RG + F+ A+ D
Sbjct: 126 PDFAPAFYNRALAFEHVKQFDKALADYNEALRLDPKHTNALVGRGTAHATAGQFDKALAD 185
Query: 506 LSACVKLDKENKSAY 520
+ ++LD + A+
Sbjct: 186 YNEALRLDPKQSLAF 200
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG Q E + A++D+ A + +P+ + RG A+ + AI+DL++++
Sbjct: 406 LFERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIR 465
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+P ++RG V F + AA+ D ++LD ++ +A GL ++ G+
Sbjct: 466 LDPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGD 520
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP++ L ERG +F + A+ D + +KLD ++ +AY+ G A + G A
Sbjct: 23 EPDTVHELLERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALS 82
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGL 593
+A++ D N T++Y+ LA EKA+ L + + F+ A++ R L
Sbjct: 83 DLTEALKRDPN-----NATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRAL 137
Query: 594 LLHGLGQHKKAIKDLSSGSR 613
+ Q KA+ D + R
Sbjct: 138 AFEHVKQFDKALADYNEALR 157
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A GE +A+ D A +PN+A I + RG V+ +D++ A++DL+ ++LD
Sbjct: 409 RGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDP 468
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A+ G +G + A +A++LD
Sbjct: 469 TFVWAFNDRGAVRFVMGAWGAALGDFDEALRLD 501
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE----PNSADILHERGI 491
DF +A++ A + G A A+ + A+ + K F+ PN A +L ERG
Sbjct: 353 GDFPDAVKWQNKALKHPGYDGPA-GAVARARLALYEAGKPYRFQSPTAPNGAALLFERGA 411
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+F+ A+ D A +LD N + G ++ +Y +A + ++I+LD F+
Sbjct: 412 RWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDPTFV 471
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
A+ + AL + L +D + + A RGLL G
Sbjct: 472 WAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAG 519
>gi|389693671|ref|ZP_10181765.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
gi|388587057|gb|EIM27350.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
Length = 287
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y+SAI+ F + ++ DP Y A R A + A+SDFT +IQ++
Sbjct: 69 TRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTNRALALRQTSRNDQALSDFTRSIQAD 128
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ G A+ R A + EA+ DL+ A P SA+ LH RG++ + A+ D
Sbjct: 129 PNYGPAYIGRANLYRAQNQYQEALADLNMATRLLPESAEALHSRGLLYQRQGMHQQAILD 188
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G + + ++ KA E A+ +D +W +
Sbjct: 189 FDATIDRNPFVGAPYAARGQSFVATNQFDKAIEDFNAALNVDNKDANSWAWRGVALERKG 248
Query: 566 NSEKALECLQQVLYID 581
+ +ALE Q+ L +D
Sbjct: 249 DRSQALESYQRALALD 264
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G S I LS ++ PN + RG + ++++A+ D + V+LD AYT
Sbjct: 44 GTSTVNISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTN 103
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LAL +A ++IQ D N+ A+ Y+ ++AL L +
Sbjct: 104 RALALRQTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLLP 163
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A H RGLL G H++AI D
Sbjct: 164 ESAEALHSRGLLYQRQGMHQQAILDF 189
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G IS +++ +P P A RG A A +AI+DFT+A+Q +P+ A+
Sbjct: 43 QGTSTVNISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYT 102
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R A + +A+ D +++++ +PN R + + A+ DL+ +L
Sbjct: 103 NRALALRQTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLL 162
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAI-----QLDRN-FLEA-WGHLTQFYQDLAN 566
E+ AL S G + + H +AI +DRN F+ A + Q +
Sbjct: 163 PESAE-------ALHSRGLLYQRQGMHQQAILDFDATIDRNPFVGAPYAARGQSFVATNQ 215
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+KA+E L +D + + ++ RG+ L G +A++
Sbjct: 216 FDKAIEDFNAALNVDNKDANSWAWRGVALERKGDRSQALE 255
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ LS ++ + + SAY G A + +G Y A KA+QLD N+ A+ + +
Sbjct: 50 ISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTNRALALR 109
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ +++AL + + D + AY R L Q+++A+ DL+ +R ++P
Sbjct: 110 QTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATR-LLPE 164
>gi|193215316|ref|YP_001996515.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088793|gb|ACF14068.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 469
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L+ G+A N G+ ++SIF++ + P+ E + + + +R +EA + E ++
Sbjct: 110 LNLGLALDNIGRPEESVSIFERAIAISPVDDELFFSKAISLQRLERFVEAEQA-LQECLR 168
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP EAW G + LG+ E++ +K ++ +P S++ + RGIV K K FN +V
Sbjct: 169 INPEHREAWYELGYCKDMLGKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESV 228
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ V + + SA+ G L++IG ++A +++LK I L+ + + ++ Y++
Sbjct: 229 QSYDMAVAIRENFSSAWYNRGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEE 288
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
L N ++A+ ++ + D ++ A++ + +H A+ + S ++P I L
Sbjct: 289 LGNYKEAITFYEKAVASDADYADAWYALACCYDMINKHDFALYAIEH-SVKLIPDCIEYL 347
Query: 624 TRWRNLCFNAWPFIRRRLLCTRLLK 648
++ +N F+ R+L+
Sbjct: 348 QAKADIEYNLADFLAALKTYQRILE 372
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 42/263 (15%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK ++ +++ + DP RG + + ++ + A+ + AW
Sbjct: 188 GKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESVQSYDMAVAIRENFSSAWYN 247
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +G EAI K ++ EP+ D L + ++ A+ V D
Sbjct: 248 RGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEELGNYKEAITFYEKAVASDA 307
Query: 515 ENKSAYTYLG----------LALSSI------------------------GEYKKAEEAH 540
+ A+ L AL +I ++ A + +
Sbjct: 308 DYADAWYALACCYDMINKHDFALYAIEHSVKLIPDCIEYLQAKADIEYNLADFLAALKTY 367
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK-------RFSKAYHLRGL 593
+ ++LD W Y +L KA+ Q+VL +D + AY+L G
Sbjct: 368 QRILELDELNAMVWYDTASLYLELNKPNKAIPSFQKVLELDPTHADAHFELATAYYLNGQ 427
Query: 594 LLHGLGQHKKAIKDLSSGSRTMM 616
L KAIK L SG + M+
Sbjct: 428 KAQALDLLVKAIK-LDSGKKDMV 449
>gi|428207485|ref|YP_007091838.1| hypothetical protein Chro_2486 [Chroococcidiopsis thermalis PCC
7203]
gi|428009406|gb|AFY87969.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 424
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 5/218 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + EG A+ F++ LK DP E + RG + + + AISD+ AI+ +P
Sbjct: 14 GLHALFEGNVKIALLYFNKALKLDPNLVEVIYNRGNLYSILKMSDKAISDYDLAIKLDPQ 73
Query: 448 AGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG ++ E AI D +KA+E + N R D++AA++DL
Sbjct: 74 HYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDL 133
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + + + +Y G G+Y A +AI L+ +F A+ + Y+ LA
Sbjct: 134 STAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQ 193
Query: 567 SEKALECLQQVLYIDKRFSK----AYHLRGLLLHGLGQ 600
++ AL V+++DK SK AY RG +L LG+
Sbjct: 194 TQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGE 231
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AIS +D +K DP + +A I RG Q++ EAAI+DFT+AI+ + + +A R A
Sbjct: 60 AISDYDLAIKLDPQHYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANA 119
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ L + A++DLS A+ P+ +D RG + + D++AAV D S + L+ +
Sbjct: 120 YSYLNDYSAALKDLSTAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAI 179
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLD----RNFLEAWGHLTQFYQDLANSEKALECL 574
AY G A + + + A + I LD +N + A+ + + + L A
Sbjct: 180 AYLNRGNAYKKLAQTQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEY 239
Query: 575 QQVLYI--DKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + D+ F + H RG LL GQ A++
Sbjct: 240 DRAIELCPDEHFLQ--HKRGALLCQFGQLSSALE 271
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + N G + AI+ + Q+++++P A I RG +L+AA +D+T+AI P
Sbjct: 290 RAWVRKNLGDISGAIADWSQVIEQNPENVLAYIERGELYFQSHQLKAAKADYTKAIILEP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R + +L V A++D +A+E P+ A R +V +FK AV +
Sbjct: 350 DEPHFYVVRAEVNLSLNYLVAALKDCDRAIEIAPDFARANLIRTLVKLRFKKMGTAVSN 408
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 102/263 (38%), Gaps = 49/263 (18%)
Query: 358 TSNEAKRNKKFCVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
T E K+N + + +K+ + + ++R A Y++A+ + P
Sbjct: 84 TYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDLSTAIHIAPDR 143
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
++ + RG + AA+ DF++AI NP A+ RG A L ++
Sbjct: 144 SDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQT--------- 194
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK----SAYTYLGLALSSI 530
AA+ D +A + LDK N +AY Y G L S+
Sbjct: 195 -------------------------QAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESL 229
Query: 531 GEYKKAEEAHLKAIQL--DRNFLEA--WGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
GE A + +AI+L D +FL+ L QF Q ALE + +D++
Sbjct: 230 GELAAAFSEYDRAIELCPDEHFLQHKRGALLCQFGQ----LSSALEHYNIAISLDRKCMY 285
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
Y R + LG AI D S
Sbjct: 286 CYADRAWVRKNLGDISGAIADWS 308
>gi|294781973|ref|ZP_06747305.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
gi|294481784|gb|EFG29553.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
Length = 275
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ----SNPSAGEAWKRR 455
I + + + +DP + I RG RE E A+ D++ I+ SN + G+ ++ R
Sbjct: 12 VIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYSNSTKGKYYRDR 71
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +AI+D SKA+E EP D + RG + K++ A+ED S ++L
Sbjct: 72 GYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELSPY 131
Query: 516 N----KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ Y G A + EY++A E + KAI+ E W
Sbjct: 132 SVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIE------EGW----------------- 168
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
V Y + YH RG L + LG+++KAI+D S
Sbjct: 169 -----VTY------RYYHARGELYYYLGEYEKAIEDYSKA 197
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
E Y++ + D + D R + F ++ + R + S S S +
Sbjct: 14 EEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSR----VIELSSYSNSTKGKYYR 69
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG +Y AI F + ++ +P + RG A + +E + AI D++ AI+ +
Sbjct: 70 DRGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELS 129
Query: 446 PSA----GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P + G+ + RG A L E A++D SKA+E + H RG + + ++
Sbjct: 130 PYSVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIEEGWVTYRYYHARGELYYYLGEYEK 189
Query: 502 AVEDLSACVK 511
A+ED S ++
Sbjct: 190 AIEDYSKAIE 199
>gi|425449711|ref|ZP_18829547.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
gi|389769840|emb|CCI05475.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
Length = 897
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N+ KY A++ F++ + + + +A RG Q++ E A++D+ +AI+ N
Sbjct: 681 NRGILYYNQQKYKLALADFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIELN 740
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA+ RG LG+ A+ D SKA+E N A + RG++ K + A+ D
Sbjct: 741 RNYAEAYVNRGALYYDLGKYELALADFSKAIEINRNYAMAYNNRGLLYQDQKKYQLALAD 800
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + AY G + +YK A + +AI+++ NF EA+ + Y +L
Sbjct: 801 YNKAIELDSKLALAYNNRGNLYFAQQKYKLALADYEEAIKINPNFAEAYANRGLLYAELK 860
Query: 566 NSEKALECLQQ--VLYIDKRFSKAYHLRGLLLHGLG 599
++KA LQQ +L+ + AY L LG
Sbjct: 861 QTKKAKIDLQQAAILFRQQNNMAAYEKVMQFLQILG 896
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q++ + A++DF +AI N + +A++ RG + A+ D +KA+E
Sbjct: 682 RGILYYNQQKYKLALADFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIELNR 741
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ RG + + + A+ D S +++++ AY GL +Y+ A +
Sbjct: 742 NYAEAYVNRGALYYDLGKYELALADFSKAIEINRNYAMAYNNRGLLYQDQKKYQLALADY 801
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+LD A+ + Y + AL ++ + I+ F++AY RGLL L Q
Sbjct: 802 NKAIELDSKLALAYNNRGNLYFAQQKYKLALADYEEAIKINPNFAEAYANRGLLYAELKQ 861
Query: 601 HKKAIKDLSSGS 612
KKA DL +
Sbjct: 862 TKKAKIDLQQAA 873
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 8/229 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP-------MYPEALIGRGTARAFQRELEAAISDF 438
+G+A GKY +AI F Q + P + L + + E A++
Sbjct: 573 GKGLALGYLGKYQTAIEAFQQAINTLPKREDLKNFHSSILQQQSVVYRYLENYEQALTVI 632
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AI P+ + + + L E + +++A+ P +A + RGI+ + +
Sbjct: 633 NQAISLVPNNPNHYNEKWSVLSELKRYDEGLAAITQAINLAPRAA-WYYNRGILYYNQQK 691
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ D + + L++ AY G +Y+ A + KAI+L+RN+ EA+ +
Sbjct: 692 YKLALADFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIELNRNYAEAYVNRG 751
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y DL E AL + + I++ ++ AY+ RGLL +++ A+ D
Sbjct: 752 ALYYDLGKYELALADFSKAIEINRNYAMAYNNRGLLYQDQKKYQLALAD 800
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 400 AISIFDQILKE-DP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE------ 450
AI FD+ +K+ DP +Y A G+G A + + + AI F +AI + P +
Sbjct: 551 AIKAFDEAIKQNDPDNVY-LAWYGKGLALGYLGKYQTAIEAFQQAINTLPKREDLKNFHS 609
Query: 451 -AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+++ L +A+ +++A+ PN+ + +E+ V + K ++ + ++
Sbjct: 610 SILQQQSVVYRYLENYEQALTVINQAISLVPNNPNHYNEKWSVLSELKRYDEGLAAITQA 669
Query: 510 VKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L ++A+ Y G+ + +YK A KAI L+RNF +A+ + Y+ E
Sbjct: 670 INLAP--RAAWYYNRGILYYNQQKYKLALADFNKAIDLNRNFAKAYENRGNLYRRQQKYE 727
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AL + + +++ +++AY RG L + LG+++ A+ D S
Sbjct: 728 LALADYNKAIELNRNYAEAYVNRGALYYDLGKYELALADFS 768
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 359 SNEAKRNKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
N +R +K+ + +K+I + + ++RG + GKY A++ F + ++ +
Sbjct: 717 GNLYRRQQKYELALADYNKAIELNRNYAEAYVNRGALYYDLGKYELALADFSKAIEINRN 776
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A RG Q++ + A++D+ +AI+ + A+ RG A + A+ D
Sbjct: 777 YAMAYNNRGLLYQDQKKYQLALADYNKAIELDSKLALAYNNRGNLYFAQQKYKLALADYE 836
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--NKSAY 520
+A++ PN A+ RG++ + K A DL L ++ N +AY
Sbjct: 837 EAIKINPNFAEAYANRGLLYAELKQTKKAKIDLQQAAILFRQQNNMAAY 885
>gi|312130417|ref|YP_003997757.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906963|gb|ADQ17404.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 445
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G Y +IS F + +P + RG A+ ++ AISDF AIQ +P
Sbjct: 31 GVSKSKSGDYLGSISAFSTAINMNPDNASSYFNRGLAKQALKDHRGAISDFDRAIQISPK 90
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
++ R ++++ E+ A+QD + A+E P +RG++ K D AV D +
Sbjct: 91 DALSYHYRAISKSSQDENGAALQDFNIAIELSPKDVQSYLQRGVLFAKLNDLPLAVRDFN 150
Query: 508 ACVKLD---KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+L+ +E A+ GL + +G+YK A + AI+ + + + + Y +
Sbjct: 151 KVVELNPSAQEKFQAFYSRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKV 210
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
EKAL L + + +D + ++ + LRG L A D S R + P+L
Sbjct: 211 EEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNGAKIDFDSALR-LDPNL 264
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 38/264 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPE---ALIGRGTARAFQRELEAAISDFTEA 441
L RG+ A+ F+++++ +P E A RG +A + + AI+D++ A
Sbjct: 130 LQRGVLFAKLNDLPLAVRDFNKVVELNPSAQEKFQAFYSRGLCKAKMGDYKGAIADYSSA 189
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+SN + + RG+ + E +A+ DL++A++ + SA+ RG + +DFN
Sbjct: 190 IESNNKRPQPFLERGKNYIKVEEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNG 249
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYK-------------------KAEEAHLK 542
A D + ++LD K AY AL+ + +K K + L
Sbjct: 250 AKIDFDSALRLDPNLKEAYYGRAFALTMLYNHKIAIDDLGKILDTKSSTKDVKNQYVTLS 309
Query: 543 AIQLDR-----NFLEAWGHLTQ------FYQDLA-----NSEKALECLQQVLYIDKRFSK 586
QLD+ + L++ F + LA N++ AL L + + I+ + +
Sbjct: 310 KAQLDKLREAVTYTFPIPALSEDLSEGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQ 369
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSS 610
AY +RG+ +G +A+ D S
Sbjct: 370 AYFVRGMAKSAMGMQTEAVIDFGS 393
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG A+ + A+SD ++I+ NP +A+ RG A++A+G EA+ D A
Sbjct: 335 EGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSAMGMQTEAVIDFGSA 394
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
L+ P + + RG++ + NA DLS +L N AYT
Sbjct: 395 LKLHPAYPEAYYVRGLIKVSIGETNAGCVDLSRAGELGYAN--AYT 438
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 45/264 (17%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + G Y AI+ + ++ + P+ + RG E E A+ D EAI+ +
Sbjct: 168 SRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKVEEFEKALGDLNEAIKMD 227
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ E + RG A++ L + A D AL +PN + + R + A++D
Sbjct: 228 AQSAEGFALRGFAKSRLRDFNGAKIDFDSALRLDPNLKEAYYGRAFALTMLYNHKIAIDD 287
Query: 506 LSACV-------------------KLDKENKSA-YTYLGLALS---SIGEY--------- 533
L + +LDK ++ YT+ ALS S G +
Sbjct: 288 LGKILDTKSSTKDVKNQYVTLSKAQLDKLREAVTYTFPIPALSEDLSEGYFVRGLAQLRG 347
Query: 534 ---KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC-----LQQVLYIDKRFS 585
K A K+I+++ + +A+ F + +A S ++ L + +
Sbjct: 348 NNTKDALSDLNKSIEINPIYPQAY-----FVRGMAKSAMGMQTEAVIDFGSALKLHPAYP 402
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLS 609
+AY++RGL+ +G+ DLS
Sbjct: 403 EAYYVRGLIKVSIGETNAGCVDLS 426
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + ++ A+ ++ +K D E RG A++ R+ A DF A++
Sbjct: 201 LERGKNYIKVEEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNGAKIDFDSALRL 260
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE---------------- 488
+P+ EA+ R A L AI DL K L+ + ++ D+ ++
Sbjct: 261 DPNLKEAYYGRAFALTMLYNHKIAIDDLGKILDTKSSTKDVKNQYVTLSKAQLDKLREAV 320
Query: 489 -------------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
RG+ + + A+ DL+ ++++ AY G+A S+
Sbjct: 321 TYTFPIPALSEDLSEGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSA 380
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAW 554
+G +A A++L + EA+
Sbjct: 381 MGMQTEAVIDFGSALKLHPAYPEAY 405
>gi|434381044|ref|YP_006702827.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
gi|404429693|emb|CCG55739.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
Length = 480
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G Y AI FD+ ++ D Y A RG ++A E AI DF +AI+ N
Sbjct: 308 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIELN 367
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
P+ EA+ RG A+ L + EAI+D KA+E PN++D
Sbjct: 368 PNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNSD 406
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A RG A+ E AI DF +AI+ + + A+ RG ++A LG + EAI+D +
Sbjct: 302 YLIAYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFN 361
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA---LSSI 530
KA+E PN ++ + RG K + A++D ++L+ N AY + L L++I
Sbjct: 362 KAIELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNSDAYFNMALPKQLLANI 421
Query: 531 GE 532
E
Sbjct: 422 TE 423
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A +++G Y++A + KAI+LD N+L A+ + L N+E+A++ + +
Sbjct: 305 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 364
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ S+AY+ RG + L Q+++AIKD
Sbjct: 365 ELNPNISEAYNNRGNAKNNLKQYEEAIKD 393
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR + L L++ I+D DKA++LD L AY +G + + LG EEA+ + K E
Sbjct: 308 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE 365
>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
Length = 736
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 436 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+AY+ +G++L LG++ +A++ + ++
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATK 594
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 469
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARR 628
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 434 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 494 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 553
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 554 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 613
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ ++ I R S+ + G + LG + +AI
Sbjct: 614 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAI 654
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A+ +G
Sbjct: 514 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQG 573
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 574 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 633
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 634 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 693
Query: 577 VL 578
L
Sbjct: 694 SL 695
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P + +A +G + R EA + FT+A ++N + +AW +G L EAI
Sbjct: 562 NPQFSQAYYSQGIILQKLGRNSEA-LEAFTQATKANSNYYQAWLNQGALLHQLERFQEAI 620
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
KA +++ G ++ D++ A+ ++ K+N + LG +
Sbjct: 621 ASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFK 680
Query: 530 IGEYKKAEEAHLKAIQLDRN 549
+G+Y++A +A+ ++++ N
Sbjct: 681 LGQYERAIQAYQESLRYRSN 700
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716
Query: 498 DFNAAVEDLSACVKLDKE 515
+ + ++ + K+D E
Sbjct: 717 ELQQSPQNPTP--KVDSE 732
>gi|282899388|ref|ZP_06307356.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195755|gb|EFA70684.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 508
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RGI ++++ Y ++ FDQ +K DP Y EA RG A ++ R E A+ DF +
Sbjct: 289 DF-YARGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQV 347
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I +P+ + + RG L A++D ++A+ P+ + +G+ K + A
Sbjct: 348 IALDPNYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLGKYQA 407
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++LD N YT + + +Y + + AI +D + A+ + Y
Sbjct: 408 ALESSKQAIRLDPNNSYGYTIQSDVFNYLKDYAASIKVSTLAIIIDPDDFNAYINRATAY 467
Query: 562 QDLANSEKALECLQQVLYI-DKRFSK 586
N AL Q+ I ++R++K
Sbjct: 468 TLTGNFSAALVDYQKSAEIFERRYTK 493
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + Q + ++ DF +AI+ +P EA+ +RG A + L EA+ D ++ + +P
Sbjct: 293 RGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDP 352
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D RG ++ AA+ED + ++L+ AY + G+A +G+Y+ A E+
Sbjct: 353 NYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLGKYQAALESS 412
Query: 541 LKAIQLDRNFLEAWGHLTQ-----FYQDLANSEKALECLQQVL-------YIDKRFSKAY 588
+AI+LD N ++G+ Q + +D A S K + L ++ YI++ + AY
Sbjct: 413 KQAIRLDPN--NSYGYTIQSDVFNYLKDYAASIK-VSTLAIIIDPDDFNAYINR--ATAY 467
Query: 589 HLRGLLLHGLGQHKKA 604
L G L ++K+
Sbjct: 468 TLTGNFSAALVDYQKS 483
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P SA + RGI ++ +++D +K+D + AY G ALS + Y++A
Sbjct: 284 PQSARDFYARGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLD 343
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ I LD N+++ + + Y L N + ALE + + ++ +S AY +G+ LG
Sbjct: 344 FNQVIALDPNYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLG 403
Query: 600 QHKKAIK 606
+++ A++
Sbjct: 404 KYQAALE 410
>gi|443647323|ref|ZP_21129679.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335500|gb|ELS49968.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 311
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + L GI Q+ G Y A+ F+Q L+++ A R + ++ A
Sbjct: 36 AQSVHFSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAW 95
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 96 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIRLKPTYYQAYYNRGLVQSA 155
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 156 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 215
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L +++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 216 ASAYYNLACTAHQLGEYNRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 275
Query: 611 GSRTM 615
G+ +
Sbjct: 276 GANHL 280
>gi|409407329|ref|ZP_11255780.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
gi|386433080|gb|EIJ45906.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
Length = 603
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + +A +G+ A A ++ ++L + P + EA G + Q E EAA + +AI+
Sbjct: 12 LQKALALHQKGQLAPAEDLYKKVLAKLPRHFEANYLYGMLKLHQEEWEAAEAQLAKAIEL 71
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + A LG EA++ ++ L P AD L RG + A+E
Sbjct: 72 NPDHPDTYFDHAGALVHLGRDAEAVERYNQILAQNPAFADALLARGAALRRLDLNREALE 131
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL V+L ++ A+ LG + Y+ A ++ +A+ L +F+EAW +L +D
Sbjct: 132 DLQQAVRLVPDHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAWFNLGNACKDS 191
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+AL + L + F +A RG +L + + ++A++
Sbjct: 192 YQFEEALRAFDRALAVQPDFFEAQSNRGFVLFKMQRPEEALE 233
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 40/194 (20%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE---AAISDFTEAIQSNP 446
A V+ G+ A A+ ++QIL ++P + +AL+ RG A R L+ A+ D +A++ P
Sbjct: 85 ALVHLGRDAEAVERYNQILAQNPAFADALLARGAAL---RRLDLNREALEDLQQAVRLVP 141
Query: 447 SAGEAWKRRGQ----------ARAALGESV------------------------EAIQDL 472
+AW + G ARA+ +V EA++
Sbjct: 142 DHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAWFNLGNACKDSYQFEEALRAF 201
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL +P+ + RG V FK + A+E + L + + L +
Sbjct: 202 DRALAVQPDFFEAQSNRGFVLFKMQRPEEALEAYDRALALSDSSPDLWFNRASTLEQLSR 261
Query: 533 YKKAEEAHLKAIQL 546
+ +A +++ +A +L
Sbjct: 262 FSEASQSYQRAREL 275
>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
Length = 1085
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ +A + G+Y A++ F+ +L+ +P EAL GR A A EAA+ D+ ++ +P
Sbjct: 706 KSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDYDVIMKLDP 765
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A + LG EA + LE P + +I++ +G DF AA+
Sbjct: 766 TNSKALAEKASLLEELGRYDEAALTYGEILEITPENREIMYRQGKALEAMGDFEAAIACY 825
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ LD +N A G ALS + +Y++A + KA++ D + AW +++ AN
Sbjct: 826 DKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAW-----YFKGCAN 880
Query: 567 -----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ ALEC + + + A++ +G L + LG ++I S
Sbjct: 881 FAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESA 930
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 16/234 (6%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C + + + +V+ R A G+ +A+ +D I+K DP +AL + +
Sbjct: 722 CFNPLLELEPENVEALEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALAEKASLLEEL 781
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
R EAA++ + E ++ P E R+G+A A+G+ AI K L +P + D ++
Sbjct: 782 GRYDEAALT-YGEILEITPENREIMYRQGKALEAMGDFEAAIACYDKILALDPKNIDAIN 840
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G K + + A+ ++ D +N +A+ + G A +I A E K +QL
Sbjct: 841 NKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAISSNNAALECFNKTVQLK 900
Query: 548 RNFLEAW---GHLTQFYQDLANS----EKALEC---LQQVLYIDKRFSKAYHLR 591
+ + AW G+L D+ S E ALE LY +KRFS H R
Sbjct: 901 PDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSALY-NKRFS---HYR 950
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +I+ +D ++ P+ E+ +G + AI+ + +++ ++ W ++
Sbjct: 67 RYEESIACYDMAIETFPVSSESWYKKGDEYIQTKNYIEAINCYEKSLATDNYLSRVWFQK 126
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG EA+ +++F NS+ L +G + +++ A+ + + + E
Sbjct: 127 ATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 186
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH------LTQFYQD------ 563
+ + G+ G+Y+ A E + +AI L+ + +EAW + + YQD
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246
Query: 564 ----------------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
L +E+AL+C ++L ++A++ +G +L+ +GQ+
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306
Query: 602 KKAI 605
AI
Sbjct: 307 DAAI 310
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++D ++G A KY A++ +D+ L+ DP P A +G A
Sbjct: 824 CYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAI 883
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AA+ F + +Q P AW +G LG+ E+I ALE +P+S L+
Sbjct: 884 SSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSALYN 943
Query: 489 RGIVNFKFKDFNAAVEDLSAC-VKLD 513
+ +++ K+++ A S C KLD
Sbjct: 944 KRFSHYRIKEYDEA----SVCKAKLD 965
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +AI+ +D+IL DP +A+ +G A + + + A++ + +A++ +P AW
Sbjct: 816 GDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYF 875
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A+ + A++ +K ++ +P+ + +G + D N ++ + +++D
Sbjct: 876 KGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDP 935
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ SA + I EY +A K LD F
Sbjct: 936 DSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPGF 971
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 35/260 (13%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +GI G Y SAI +DQ + +P EA +G + A++ +
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ S P A +++G LG + EA+Q + L + P++ + + +G V +
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306
Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
+AA+ + L +K + Y+ + G+A
Sbjct: 307 DAAIICYDRALNPDAGIEIQEAGDSLLESLKAYDSSLPVYSEVPEFKSPAVKIWYDKGMA 366
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
++G Y+ A E + K ++ + + W L S +A+ C + L +D ++K
Sbjct: 367 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 426
Query: 587 AYHLRGLLLHGLGQHKKAIK 606
++ +G LG++K A+K
Sbjct: 427 VWYKKGYDSSKLGKYKDAVK 446
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 397 YASAISIFDQILKEDPMY--PEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAW 452
Y S++ ++ ++ P + P I AF E+A+ + + +++ P W
Sbjct: 339 YDSSLPVYSEV----PEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIW 394
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++G L +S EA+ KAL+ + A + +++G + K + AV+ + L
Sbjct: 395 YQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDL 454
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D+ A+ AL+ IG Y+ + + + +++ + E W + +L ++A +
Sbjct: 455 DENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYNKGLLLDELGRYQEASD 514
Query: 573 CLQQVLYIDKRFSKA 587
C Q L I+ +S A
Sbjct: 515 CYSQALQINSNYSVA 529
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G+ A+ +D+IL P EA +G+ + +AAI + A+ NP
Sbjct: 262 KGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRAL--NP 319
Query: 447 SAGEAWKRRGQARAALGESVEA----IQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
AG + G + L ES++A + S+ EF+ + I +++G+ ++ +A
Sbjct: 320 DAGIEIQEAGDS---LLESLKAYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESA 376
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + ++ + ++ + GL L + + +A + KA++LD + + W
Sbjct: 377 LECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSS 436
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + A++ + + +D+ ++ A++ + L +G+++ +I
Sbjct: 437 KLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSI 479
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 41/256 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A Y A++ F++ L P E +G + E+AI + +AI NP
Sbjct: 160 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 219
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
EAW +G E +E QD EF EP + L ++G+ + A
Sbjct: 220 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 275
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF------------ 550
++ + +N A+ G L+++G+Y A + +A+ D
Sbjct: 276 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 335
Query: 551 -------LEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
L + + +F + +L N E ALEC +VL + + ++
Sbjct: 336 LKAYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 395
Query: 590 LRGLLLHGLGQHKKAI 605
+GL L L + +A+
Sbjct: 396 QKGLNLDRLNKSAEAV 411
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ +++ +G+ K A A+ +D+ LK D Y + +G +
Sbjct: 379 CYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKL 438
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ + EAI + + AW + A A +G ++I + LE P+SA+I +
Sbjct: 439 GKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYN 498
Query: 489 RGIV----------------------NFKFKDF--NAAVEDLSA-CVKLDKENKSA---- 519
+G++ N+ F N +E LS + NK+
Sbjct: 499 KGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNSTSISANNKNTNINP 558
Query: 520 -YTYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
G S + YK A +K + + + EAW Y L E AL
Sbjct: 559 QKAITGGFWSYLLSYKYASPDDNTEISGSIKDLSPEFGYDEAWYGKASTYSKLEMYEDAL 618
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L I+ ++A++ +G L LG+ ++A++
Sbjct: 619 HSYDMALAINPVRTEAWYEKGSALDKLGKSEEAME 653
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L ++ ++ AI D +LA I I N+ F S++E ++ + DKAL+ DP
Sbjct: 812 LEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPA 871
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
A+ KGCA A+ AL + K
Sbjct: 872 AWYFKGCANFAISSNNAALECFNK 895
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+A YS+LE+++ + D AL ++P +A+ KG A LG+ EEA+ ++K
Sbjct: 604 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L + + I D+L++++S + A+ + LA L SL + +A+ + LL E ++
Sbjct: 679 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 736
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+ RAF ++ + + D D ++LDPT +A K LGR +EA
Sbjct: 737 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALAEKASLLEELGRYDEA 787
>gi|145499952|ref|XP_001435960.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403097|emb|CAK68563.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 54/294 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
SRG+ ++ Y AI F+ ++ +P YPE RG AR EL AI DF +A++
Sbjct: 385 SRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDAIKDFEQALELN 444
Query: 444 -SNPSA----GEAWKRRGQARAAL---------------------------GESVEAIQD 471
+NP G+A++ + AL E +AI D
Sbjct: 445 SNNPGIYSGLGQAYRLKKNYEKALFYLDKALKESPHNQEFLVQRSNIFIDKKEYPKAIID 504
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-------LG 524
L+ AL+ +PN A I + RG+ +K ++F ++ DL ENK +Y LG
Sbjct: 505 LTSALDRKPNDAQIYYRRGLAYYKNQEFKKSIADLYKAF----ENKPFQSYVPDIHYHLG 560
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFYQDLANSEKALECLQQVLYIDKR 583
++ +++ + KA E AI L + + A+ H + + + ++ ALE +V+ +
Sbjct: 561 ISFANLEMFDKAIEPLTNAIDLQK-YEPAYIHERAKCFLLVGENQLALEDFDKVIEMQPH 619
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGS--RTMMPHLIWNL-----TRWRNLC 630
S AY R L + KA +D M P LI N ++ LC
Sbjct: 620 NSHAYFGRAFAHKALQSYGKAAEDFGRAKDLDPMNPKLIVNFKQIYYVKYIKLC 673
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F S+G+A + +Y AI +F++ L P + ++ G L+ A+S FT+ +
Sbjct: 314 FYHSKGLAYQDSEEYEMAIKMFEEALNITPNHMPSIFHLGLMYHKNDNLKEALSLFTQVL 373
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + RG + AIQD + A+E EP + + RG+ + + N A
Sbjct: 374 NAEGKDRLVYSSRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDA 433
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D ++L+ N Y+ LG A Y+KA KA++ + E + +
Sbjct: 434 IKDFEQALELNSNNPGIYSGLGQAYRLKKNYEKALFYLDKALKESPHNQEFLVQRSNIFI 493
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
D KA+ L L ++ Y+ RGL + + KK+I DL
Sbjct: 494 DKKEYPKAIIDLTSALDRKPNDAQIYYRRGLAYYKNQEFKKSIADL 539
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A+ FT AI+ + S + + A LG+ ++ + +KAL + A L+
Sbjct: 224 QQYELALERFTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQDARALYN 283
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + A D +KL +N Y GLA EY+ A + +A+ +
Sbjct: 284 RGNTHLALGKRTEAHADYDKAIKLMPKNSKFYHSKGLAYQDSEEYEMAIKMFEEALNITP 343
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + + HL Y N ++AL QVL + + Y RGL+ + ++ AI+D
Sbjct: 344 NHMPSIFHLGLMYHKNDNLKEALSLFTQVLNAEGKDRLVYSSRGLVYMDMKNYELAIQDF 403
Query: 609 SSG--SRTMMPHLIWN 622
++ P +N
Sbjct: 404 NAAIEMEPTYPETYYN 419
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
++ AI++ + +P Y + RG A + + A+ DF+ A++ + E + RG
Sbjct: 53 FSEAITLLQNSSQTEPQYAKFYAARGNAYMQTGQYQRALFDFSTAVRFEENNAEHYGARG 112
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LGE +A+++ KA++ + + R +V + ++ A++D +K K++
Sbjct: 113 NCFLQLGEVNDALKEYDKAIQIKSTDGFLFLNRALVYARLDNYKKAIDDYQQALKYLKDS 172
Query: 517 KS---AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ ++G I Y ++ E KA + ++ A +L Y + E ALE
Sbjct: 173 NAQFKAHFHMGNCYRQIKMYDQSIEHLQKACDIKKDEAPAHNNLGLSYFENQQYELALER 232
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ + D+ + Y+ + L L+ LG
Sbjct: 233 FTRAIEQDESKATYYNNKALALYHLG 258
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 12/275 (4%)
Query: 354 MLKE--TSNEAKRNKKFCVTRI------SKSKSISVDFRLSRGIAQVNEGKYASAISIFD 405
MLKE T+N+ R + I S+++ F +RG A + G+Y A+ F
Sbjct: 36 MLKENKTANDFDRAIQLFSEAITLLQNSSQTEPQYAKFYAARGNAYMQTGQYQRALFDFS 95
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
++ + E RG E+ A+ ++ +AIQ + G + R A L
Sbjct: 96 TAVRFEENNAEHYGARGNCFLQLGEVNDALKEYDKAIQIKSTDGFLFLNRALVYARLDNY 155
Query: 466 VEAIQDLSKALEF--EPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+AI D +AL++ + N+ H G + K ++ ++E L + K+ A+
Sbjct: 156 KKAIDDYQQALKYLKDSNAQFKAHFHMGNCYRQIKMYDQSIEHLQKACDIKKDEAPAHNN 215
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LGL+ +Y+ A E +AI+ D + + + L + + +L + L ID
Sbjct: 216 LGLSYFENQQYELALERFTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDD 275
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
+ ++A + RG LG+ +A D + +MP
Sbjct: 276 QDARALYNRGNTHLALGKRTEAHADYDKAIK-LMP 309
>gi|432328071|ref|YP_007246215.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
gi|432134780|gb|AGB04049.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
Length = 596
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 47/279 (16%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP------MYPEALIGRGT 423
V R K + +F+ +A VN Y A + +++K+ + GRG
Sbjct: 95 VIRAGLKKFKNENFQYLSAVALVNAEDYNLAEKVLRELMKKGAKDLHFVVLGNIYFGRG- 153
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
E E A+ + A++ NP EAW +G LG EA++ +ALE EP+
Sbjct: 154 ------EKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPSYK 207
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG + +AAV D +++D ++ A+ +G AL ++ Y ++ +K+
Sbjct: 208 EAWYNRGYTHHAMGQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFMKS 267
Query: 544 IQLDRNFLEAWGHL-------------TQFYQ---------------------DLANSEK 569
+ ++ N+ AW ++ F++ +L E+
Sbjct: 268 VSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKYEE 327
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ALECL+ + +D + + ++ RGL L+ L ++++AI+ L
Sbjct: 328 ALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESL 366
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + R + + EG Y AIS + LK++P E G A E + A S + +
Sbjct: 6 DVEIDRALELMMEGYYREAISHLEIALKKNPDNYEIWFYLGNAYYAVGEYKRARSSYLKV 65
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERGIVNFKFKDFN 500
+ NPS E + +G A + + L +F+ + L +VN +D+N
Sbjct: 66 LSLNPSFPEVYLSLANLYVRMGNLKRARRVIRAGLKKFKNENFQYLSAVALVN--AEDYN 123
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A + L +K ++ + LG GE +KA E + +A++ + +EAW +
Sbjct: 124 LAEKVLRELMKKGAKDLH-FVVLGNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFL 182
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L E+AL+C + L I+ + +A++ RG H +GQ A+ D
Sbjct: 183 LFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVAD 229
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G G Y A+ +D+ L+ +P Y EA RG +L AA++D+ A++ +
Sbjct: 178 NKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHALRID 237
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-------------------ADIL 486
AW G A L +E+I K++ PN +
Sbjct: 238 SRDEIAWNNMGNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPF 297
Query: 487 HERGI-VNFKFK--------------DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
HE+ + +N KF + A+E L + LD + + + GLAL +
Sbjct: 298 HEKALSINPKFDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLE 357
Query: 532 EYKKAEEAHLKAIQLDRNFLEA 553
Y++A E+ A++ D ++A
Sbjct: 358 RYEEAIESLKIAMERDTTLVKA 379
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A N Y +I F + + +P Y A G A + +I +A+ NP
Sbjct: 248 GNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPK 307
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G A LG+ EA++ L A++ +P+ + + RG+ +K + + A+E L
Sbjct: 308 FDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESLK 367
Query: 508 ACVKLDKENKSA-------YTYLGLALSSIGEYKKA 536
++ D A Y +LG S+ Y+ A
Sbjct: 368 IAMERDTTLVKAPELIGDIYDFLGYPTESVKYYEIA 403
>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
Length = 707
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 407 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+AY+ +G++L LG++ +A++ + ++
Sbjct: 527 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATK 565
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 560
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 561 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARR 599
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 525 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 584
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ ++ I R S+ + G + LG + +AI
Sbjct: 585 ERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAI 625
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A+ +G
Sbjct: 485 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQG 544
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 545 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 604
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 605 SEVFIGIGNAWYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 664
Query: 577 VL 578
L
Sbjct: 665 SL 666
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P + +A +G + R EA + FT+A ++N + +AW +G L EAI
Sbjct: 533 NPQFSQAYYSQGIILQKLGRNSEA-LEAFTQATKANSNYYQAWLNQGALLHQLERFQEAI 591
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
KA +++ G ++ D++ A+ ++ K+N + LG +
Sbjct: 592 ASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFK 651
Query: 530 IGEYKKAEEAHLKAIQLDRN 549
+G+Y++A +A+ ++++ N
Sbjct: 652 LGQYERAIQAYQESLRYRSN 671
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 516 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKE 515
+ + ++ K+D E
Sbjct: 688 ELQQSPQN--PTPKVDSE 703
>gi|427707047|ref|YP_007049424.1| hypothetical protein Nos7107_1633 [Nostoc sp. PCC 7107]
gi|427359552|gb|AFY42274.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 280
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 100/190 (52%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G +AI+ + + L +P Y A GRG A + E AI+D+ +A++ +P+ EA+
Sbjct: 72 KGDLQAAIASYTKALNLNPDYSAAYKGRGLAYFDTGDKEKAIADYNDALRLSPNDAEAFN 131
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG ARA+LG++ AI D ++A++ PN A+ + R + + +++D + L+
Sbjct: 132 SRGNARASLGDNRNAIADYTQAIKLSPNYAEAYNNRANARAAIGEKDGSLDDYDQAIILN 191
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G A ++ G+ + A + ++I+L+ NF A+ + + + A++
Sbjct: 192 PRYAIAYNNRGNARATKGDKQGAISDYNESIRLNPNFAPAYNNRGNARAAQGDKQGAIKD 251
Query: 574 LQQVLYIDKR 583
L+Q I +R
Sbjct: 252 LEQAAAILQR 261
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + + +L+AAI+ +T+A+ NP A+K RG A G+ +AI D + AL P
Sbjct: 65 QGQNQHLKGDLQAAIASYTKALNLNPDYSAAYKGRGLAYFDTGDKEKAIADYNDALRLSP 124
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + RG D A+ D + +KL AY A ++IGE + + +
Sbjct: 125 NDAEAFNSRGNARASLGDNRNAIADYTQAIKLSPNYAEAYNNRANARAAIGEKDGSLDDY 184
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI L+ + A+ + + + A+ + + ++ F+ AY+ RG G
Sbjct: 185 DQAIILNPRYAIAYNNRGNARATKGDKQGAISDYNESIRLNPNFAPAYNNRGNARAAQGD 244
Query: 601 HKKAIKDL 608
+ AIKDL
Sbjct: 245 KQGAIKDL 252
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ + G +AI+ + Q +K P Y EA R ARA E + ++ D+ +AI N
Sbjct: 132 SRGNARASLGDNRNAIADYTQAIKLSPNYAEAYNNRANARAAIGEKDGSLDDYDQAIILN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG ARA G+ AI D ++++ PN A + RG D A++D
Sbjct: 192 PRYAIAYNNRGNARATKGDKQGAISDYNESIRLNPNFAPAYNNRGNARAAQGDKQGAIKD 251
Query: 506 LSACVKL 512
L +
Sbjct: 252 LEQAAAI 258
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+GQ + G+ AI +KAL P+ + RG+ F D A+ D + ++L
Sbjct: 65 QGQNQHLKGDLQAAIASYTKALNLNPDYSAAYKGRGLAYFDTGDKEKAIADYNDALRLSP 124
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G A +S+G+ + A + +AI+L N+ EA+ + + + +L+
Sbjct: 125 NDAEAFNSRGNARASLGDNRNAIADYTQAIKLSPNYAEAYNNRANARAAIGEKDGSLDDY 184
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + ++ R++ AY+ RG G + AI D + R
Sbjct: 185 DQAIILNPRYAIAYNNRGNARATKGDKQGAISDYNESIR 223
>gi|154341943|ref|XP_001566923.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064248|emb|CAM40447.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 849
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 55/339 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ +A++++ + L+ P + +AL R + AI D+T A++ +P
Sbjct: 417 RGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALELDP 476
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK----------- 495
+ G + G A+Q ++A+E + + D H RG + K
Sbjct: 477 RNPFTYYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFFHNRGFMQRKQGAYTAAIADY 536
Query: 496 ----------FKD-------------FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
FK ++ AV D +A +K+D +N + Y G AL+ +G+
Sbjct: 537 TAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAALKIDSDNSNVYHNRGAALAKLGK 596
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A E +A++ D + Y L ++A+ + + +DKR H RG
Sbjct: 597 LRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRG 656
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMMPH----------LIWNLTRWR------NLCFNAWPF 636
+G+ + AI D S+ + M PH + L R+ N P
Sbjct: 657 HTYRNMGELELAIADYSAAIK-MAPHGHTTYSSRAYALRKLGRYEAAIEDYTKALNEQPG 715
Query: 637 IRRRLLCTRLLKSTVSFAGLTLMEILIPSSRNIGAKDCI 675
+R ++L +R FA L L E I + A D +
Sbjct: 716 VRTKVLNSR----AYCFARLNLFEYAIRDYSEVLATDPV 750
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +RG GE A+ +KALE P L R K K++ A++D +A ++
Sbjct: 414 FYQRGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALE 473
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS-EKA 570
LD N Y LG++ G + +A +A +AI+LD + + + H F Q + A
Sbjct: 474 LDPRNPFTYYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFF-HNRGFMQRKQGAYTAA 532
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ +++D K+++ R LG + +A+ D ++
Sbjct: 533 IADYTAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAA 573
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ---SN 445
A++N +YA I + ++L DP+ AL RG + + AAI DFT AI+
Sbjct: 728 FARLNLFEYA--IRDYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEA 785
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
PS A+ RG +R L + +A+ DL +AL +
Sbjct: 786 PSTANAYYSRGTSRLQLHQVPQAVGDLKQALRLD 819
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 35/168 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A++ F + ++ D P L RG ELE AI+D++ AI+
Sbjct: 620 ARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRGHTYRNMGELELAIADYSAAIKMA 679
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----------------------FE---- 479
P + R A LG AI+D +KAL FE
Sbjct: 680 PHGHTTYSSRAYALRKLGRYEAAIEDYTKALNEQPGVRTKVLNSRAYCFARLNLFEYAIR 739
Query: 480 ---------PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
P A L+ RGI ++AA++D + ++ E S
Sbjct: 740 DYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEAPS 787
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYP-------------EALIGRGTARAFQRE 430
RL R A V YASA + + +++ P EAL RG RA +
Sbjct: 48 RLLRAKAYVQLHNYASACADLESWIQKTGYTPPDTSGDVAADSLTEALFYRGVCRARLSQ 107
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
++ A+ DFTE +Q P A R A L + V AI D AL+ +
Sbjct: 108 VKDAVGDFTEVLQREPGHRRAQYERAACHARLDDYVNAIADYEAALQMD 156
>gi|186686367|ref|YP_001869563.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc
punctiforme PCC 73102]
Length = 709
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ +D+ ++ P Y EA GRG A + + AI+ F +A+Q N + E W +G+A
Sbjct: 383 ALAAYDRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAF 442
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ L + +AI+ KA+E + ++ + +++G+ + A+ V L + + A
Sbjct: 443 SNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQA 502
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ LG AL ++ Y+ A A+ KA+Q ++ +AW +L +A+E QV+
Sbjct: 503 WYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIK 562
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +A+ G LH ++++AIK
Sbjct: 563 YNPNSYQAWFNLGWSLHQNQRYEEAIK 589
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ ++++ + P Y + G+G ++ + A++ + AIQ P EAW R
Sbjct: 345 RYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIKPDYFEAWSGR 404
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+L EAI KAL+ S+++ + +G ++ A++ ++L +
Sbjct: 405 GFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKSD 464
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A+ GLAL + Y++A A+ K + L ++ +AW +L +L + + A
Sbjct: 465 NYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYD 524
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + +A+ RG L L ++ +AI+ +
Sbjct: 525 KAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFN 558
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N +Y AI+ + +++ P Y +A G A + + A + + +A+Q
Sbjct: 472 KGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKS 531
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +AW RG L EAI+ ++ +++ PNS G + + + A++
Sbjct: 532 SYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSY 591
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ L ++ + LG + + +Y+ A ++ KA++ + E+W
Sbjct: 592 NKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYNKAVRYKPDHSESW 639
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N +Y AI +++ ++ EA +G A E AI+ + + +
Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLK 496
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G A L +A KA++++ + RG + + A+E
Sbjct: 497 PDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIES 556
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + A+ LG +L Y++A +++ KA L + W +L L
Sbjct: 557 FNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQ 616
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ + + S++++ RG L L + + AI
Sbjct: 617 KYEDAIASYNKAVRYKPDHSESWYSRGNALLNLKRFQDAI 656
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A VN Y A + +D+ ++ Y +A RG R AI F + I+ NP+
Sbjct: 507 GNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPN 566
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ +AW G + EAI+ +KA + + + G + + + A+ +
Sbjct: 567 SYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYN 626
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
V+ ++ ++ G AL ++ ++ A ++ +AI+ N+ +A
Sbjct: 627 KAVRYKPDHSESWYSRGNALLNLKRFQDAIASYDRAIKYKPNYQQA 672
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A++ KA+ P+ A + +G +K K A+ +++
Sbjct: 335 KQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIK 394
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G L+S+ Y++A + KA+QL+ E W + + +L ++A++
Sbjct: 395 PDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKA 454
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + + +A++ +GL L ++++AI
Sbjct: 455 YEKAIELKSDNYEAWYKKGLALQNSNRYEEAI 486
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG----- 129
R F + L+ ++ I DKALQL+ + + KG AFS L + ++A+ +EK
Sbjct: 404 RGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKS 463
Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD-----VSNSMSSLTVSESGLNAN 182
YE + L+ EE + A ++ + +Y+ + N++ +L + NA
Sbjct: 464 DNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAY 523
Query: 183 DK 184
DK
Sbjct: 524 DK 525
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F + + A+E V + + + G L + + K+A A+
Sbjct: 328 NNAIELSKQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAY 387
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AIQ+ ++ EAW L ++A+ + L ++ S+ ++ +G L Q
Sbjct: 388 DRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQ 447
Query: 601 HKKAIK 606
+ +AIK
Sbjct: 448 YDQAIK 453
>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
Length = 421
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ I +VN GKY A+ F+ +L+ DP +A RG + AI D +A++ NP
Sbjct: 172 QAINKVNTGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNP 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R LG+ AI DL+K L+ P + D+L RG + D+ A+ED
Sbjct: 232 QDAQVRYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDY 291
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + +Y Y A + + A E + +A L + Q QD N
Sbjct: 292 SRVITLKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANL---------YFDQ--QDWTN 340
Query: 567 SEKALECLQQV 577
K L+ L+Q+
Sbjct: 341 YRKLLDKLKQL 351
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 28/251 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI ++ +G AI FD+ L+ +P + EA R AR + + A++D+T+A+Q N
Sbjct: 8 RGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQINS 67
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E + RG AR ALG++ AI+D ++ L+ PN +G K D AA+
Sbjct: 68 ESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAIASF 127
Query: 507 --SACVKLDKENK--------------------------SAYTYLGLALSSIGEYKKAEE 538
+A + LD+++K + + + + + G+Y++A E
Sbjct: 128 KQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYREALE 187
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+++D +A+ + + L + +A++ L Q + ++ + ++ + RGL+ L
Sbjct: 188 DFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYHRGLVRIEL 247
Query: 599 GQHKKAIKDLS 609
G ++ AI DL+
Sbjct: 248 GDYRGAIDDLT 258
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 32/282 (11%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+SI V F RG+A++ G AI +QILK +P P A +G+A + +AAI
Sbjct: 67 SESIEVYF--GRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAI 124
Query: 436 SDFTEAIQSNPSAGEAWKRR-----------------GQA-----------RAALGESVE 467
+ F +A Q + R G+A + G+ E
Sbjct: 125 ASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYRE 184
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++D + LE +P +A RGIV+ K D+ A++DL ++L+ ++ + GL
Sbjct: 185 ALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYHRGLVR 244
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+G+Y+ A + K +Q + + H Y + + +A+E +V+ + +++
Sbjct: 245 IELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVITLKPNDAQS 304
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL 629
Y R + A +D + W T +R L
Sbjct: 305 YRYRATAREKFEDLRGAFEDYQQAANLYFDQQDW--TNYRKL 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E + RG + G+ EAI++ KALE PN A+ ++R + F D A+ D +
Sbjct: 3 EEFYYRGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQA 62
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++++ E+ Y GLA ++G+ A E + ++++ N A Y+ L +++
Sbjct: 63 LQINSESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQA 122
Query: 570 ALECLQQV--LYIDKR 583
A+ +Q LY+D++
Sbjct: 123 AIASFKQAAQLYLDQQ 138
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R RG+ ++ G Y AI ++L+ +P + LI RG A + AI D++ I
Sbjct: 237 RYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVIT 296
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ ++++ R AR + A +D +A + D + R +++
Sbjct: 297 LKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANLYFDQQDWTNYRKLLD 346
>gi|260818525|ref|XP_002604433.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
gi|229289760|gb|EEN60444.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
Length = 868
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S + N ++ T R + S ML+E + A K V +S S +D ++ GI
Sbjct: 102 SLLGKNGATQDTCQRDQESPAASMLREYA--AVLLDKGLVPLVSSGDS-QLDAEIAFGIV 158
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEAAISDFTEAIQSN 445
N G +I F LK+ P A GRG+A A ++ E A++DFT+AI+ +
Sbjct: 159 LANTGSPDESIQHFSAFLKDHPDVIAAYHGRGSAYARKGLQYKINAELALADFTKAIELD 218
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E+++RR + + +G +AI DL A+ EP +A RG +NF ++ E+
Sbjct: 219 RKLAESYERRAEILSPIGRGRDAIVDLDIAINLEP-TARRFFRRGTLNFLREEAAKIFEN 277
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + E A LG +G+Y+KA E A+ LD ++ + Y
Sbjct: 278 V---IKANPEYVEAIRNLGQVYRELGDYEKAMEQFNTALILDDKHVQGYQFRGSLYYHSG 334
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AL ++ L ++ ++ GL +G+ IK
Sbjct: 335 RPFDALRNFKKCLALEPHNEPCQYMTGLSNSAIGRFYHGIK 375
>gi|300863514|ref|ZP_07108466.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
gi|300338470|emb|CBN53608.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
Length = 401
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA- 424
+ +++ ++ DF +RG+A G AI+ +D+ L+ P EA R A
Sbjct: 52 AIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIADYDKSLEIKPENAEAWYNRANAL 111
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R+ +R E AI+D+ +A+Q P EAW RG L + EAI D KAL P+ +
Sbjct: 112 RSLER-FEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAIADYDKALAIRPDYYE 170
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG+ F A+ + +++ A+ G+AL++ GE+ +A ++ K +
Sbjct: 171 AWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALANSGEFAEAIASYDKTL 230
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L N E W + A+ + + + + +A++ RGL L L + A
Sbjct: 231 ALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPDYHEAWYNRGLALASLEKFAAA 290
Query: 605 I 605
I
Sbjct: 291 I 291
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+RN++ + K+ +I D+ +RG+A + GK+A AI+ +++ L+ P +A
Sbjct: 149 ERNEE-AIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWY 207
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A A E AI+ + + + P+A E W +RG A G+ AI +A+E +
Sbjct: 208 NRGIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELK 267
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + + RG+ + F AA+ ++ +N+ A+ G+ALS + + A +
Sbjct: 268 PDYHEAWYNRGLALASLEKFAAAIASWDKSLEFHPDNREAWYNRGIALSKLERIEDAIAS 327
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID-KRFSK 586
+ K +++ + H Y N++ A+E LQ+ + ++ K++ K
Sbjct: 328 YDKVLEIKPDDAATLYHKAGLYCQQNNTDLAMENLQRAIALNPKKYRK 375
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P P+A +G A + AI+ +T+A++ NP EAW RG A LG + EAI D
Sbjct: 30 PQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIAD 89
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
K+LE +P +A+ + R + F A+ D +++ E A++ G ++
Sbjct: 90 YDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNLE 149
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++A + KA+ + ++ EAW + + L +A+ + L I +A++ R
Sbjct: 150 RNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNR 209
Query: 592 GLLLHGLGQHKKAI 605
G+ L G+ +AI
Sbjct: 210 GIALANSGEFAEAI 223
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAISDFTEAIQ 443
+G A V G++ AI+ + Q +K +P + EA RG A R+L + AI+D+ ++++
Sbjct: 39 QGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVA---YRKLGCNQEAIADYDKSLE 95
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW R A +L EAI D KAL+ P + RG + A+
Sbjct: 96 IKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAI 155
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + + + A+ G+AL S+G++ +A ++ +A+++ N +AW + +
Sbjct: 156 ADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALAN 215
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L + + ++ RG L GQ AI
Sbjct: 216 SGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAI 257
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE------NKS-AYTYLGL 525
+KA+E P + +++G + F A+ + VKL+ + N+ AY LG
Sbjct: 23 NKAVEITPQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGC 82
Query: 526 ALSSIGEYKKA------------------------EEA---HLKAIQLDRNFLEAWGHLT 558
+I +Y K+ EEA + KA+Q+ + EAW +
Sbjct: 83 NQEAIADYDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRG 142
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +L +E+A+ + L I + +A++ RG+ L LG+ +AI
Sbjct: 143 NTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAI 189
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L + I + D+ + + A A R L SL + +AI D L E +
Sbjct: 79 KLGCNQEAIADYDKSLEIKPENAEAWYNRAN--ALRSLERFEEAIADYDKALQIRPEYHE 136
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
NR + LE ++ I D DKAL + P +A+ +G A +LG+ EA++ + +
Sbjct: 137 AWSNRGNTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRAL 196
Query: 131 E--HALHQS 137
E LHQ+
Sbjct: 197 EIRPNLHQA 205
>gi|354566788|ref|ZP_08985959.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353544447|gb|EHC13901.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 278
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ + + +K +P Y EA GRG + + AI+D+++AI+ + EA+
Sbjct: 70 KGDPQGAIAAYTEAIKLNPQYAEAYNGRGLVHFDLGDKQKAIADYSQAIRLFLNYAEAYN 129
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG ARA+ G+ AI D ++A+ PN A+ + RG N A+ D ++L+
Sbjct: 130 NRGNARASTGDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLN 189
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G A S G+ ++A +AI+L+ NF A+ + + + + A+
Sbjct: 190 PKYAVAYNNRGNARSVQGDKQRAINDFDQAIRLNPNFAAAYNNRGNTRAAIGDKQGAISD 249
Query: 574 LQQVLYI 580
LQQ I
Sbjct: 250 LQQAAKI 256
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G R + + + AI+ +TEAI+ NP EA+ RG LG+ +AI D S+A+
Sbjct: 63 QGQYRHIKGDPQGAIAAYTEAIKLNPQYAEAYNGRGLVHFDLGDKQKAIADYSQAIRLFL 122
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + RG D N A+ D + +++ AY G A +++G+ +A +
Sbjct: 123 NYAEAYNNRGNARASTGDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADY 182
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L+ + A+ + + ++A+ Q + ++ F+ AY+ RG +G
Sbjct: 183 DQAIRLNPKYAVAYNNRGNARSVQGDKQRAINDFDQAIRLNPNFAAAYNNRGNTRAAIGD 242
Query: 601 HKKAIKDLSSGSRTM 615
+ AI DL ++
Sbjct: 243 KQGAISDLQQAAKIF 257
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ + G AI+ + Q ++ Y EA RG ARA ++ AI D+ EAI+
Sbjct: 96 GRGLVHFDLGDKQKAIADYSQAIRLFLNYAEAYNNRGNARASTGDVNGAILDYNEAIRIA 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A AALG+ EAI D +A+ P A + RG D A+ D
Sbjct: 156 PNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLNPKYAVAYNNRGNARSVQGDKQRAIND 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++L+ +AY G ++IG+ + A
Sbjct: 216 FDQAIRLNPNFAAAYNNRGNTRAAIGDKQGA 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G AI +++ ++ P Y EA RG A A + AI+D+ +AI+ N
Sbjct: 130 NRGNARASTGDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAALGKRNEAIADYDQAIRLN 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ G+ AI D +A+ PN A + RG D A+ D
Sbjct: 190 PKYAVAYNNRGNARSVQGDKQRAINDFDQAIRLNPNFAAAYNNRGNTRAAIGDKQGAISD 249
Query: 506 LSACVKLDKENKSAYTY 522
L K+ ++ K+ Y
Sbjct: 250 LQQAAKIFQKQKNTELY 266
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
S PS + +GQ R G+ AI ++A++ P A+ + RG+V+F D A+
Sbjct: 52 SKPSKAGDFYIQGQYRHIKGDPQGAIAAYTEAIKLNPQYAEAYNGRGLVHFDLGDKQKAI 111
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D S ++L AY G A +S G+ A + +AI++ N+ EA+ + Y
Sbjct: 112 ADYSQAIRLFLNYAEAYNNRGNARASTGDVNGAILDYNEAIRIAPNYAEAYNNRGNAYAA 171
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L +A+ Q + ++ +++ AY+ RG G ++AI D R
Sbjct: 172 LGKRNEAIADYDQAIRLNPKYAVAYNNRGNARSVQGDKQRAINDFDQAIR 221
>gi|23006671|ref|ZP_00048884.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 259
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ AIS F + ++ DP A R A +AA+ DF++AI S+
Sbjct: 46 TRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYRQTGRNDAAMQDFSKAISSD 105
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R A G+ A+ DL+ A+ P SA+ H RG+V K AV D
Sbjct: 106 PNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQGHNAEAVGD 165
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A + + + Y G +L S+G+Y KA E A+ ++ +W + Y+
Sbjct: 166 FAAAIDRNPFVAAPYAARGQSLISMGQYDKAIEDFNAALNVNAKDASSWAYRGLAYEKAN 225
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A E QQ +D + A G + GL
Sbjct: 226 RRKEASESYQQAARLDPNNAVAKQGVGRMQGGL 258
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P A RG A A + AISDF++AIQ +P + A+ R A
Sbjct: 27 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYR 86
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G + A+QD SKA+ +PN + R + D + A+ DL+ ++L E+ AY
Sbjct: 87 QTGRNDAAMQDFSKAISSDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAY 146
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEA-WGHLTQFYQDLANSEKALECLQQVL 578
GL G AE A +DRN F+ A + Q + +KA+E L
Sbjct: 147 HARGLVRQKQGH--NAEAVGDFAAAIDRNPFVAAPYAARGQSLISMGQYDKAIEDFNAAL 204
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ + + ++ RGL + K+A + +R
Sbjct: 205 NVNAKDASSWAYRGLAYEKANRRKEASESYQQAAR 239
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A G + I LS + P+ A + RG + F A+ D S ++LD + SAY
Sbjct: 19 ATGATNVNIASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAY 78
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQV 577
LA G A + KAI D NF A+ +L + DL + AL L
Sbjct: 79 NNRALAYRQTGRNDAAMQDFSKAISSDPNFSAAYIGRANLERAQGDL---DGALNDLNVA 135
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + ++AYH RGL+ G + +A+ D ++
Sbjct: 136 IRLAPESAEAYHARGLVRQKQGHNAEAVGDFAA 168
>gi|153874908|ref|ZP_02002939.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
gi|152068628|gb|EDN67061.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
Length = 240
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + +Y AI +D+ L+ +P EA RG A + A+ F +AIQ N
Sbjct: 59 NRGIALSDLKRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQIN 118
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW G LG E I+ KAL+ PN ++ + RG+V F A+E
Sbjct: 119 PDYDEAWAFYGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIES 178
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +++ + A+ GLAL + Y++A +++ KA+Q+
Sbjct: 179 YNKALQIKPDYHEAWYNRGLALYYLKRYQEAIDSYDKALQI 219
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGIA N Y A+ +D +A Q + A+S + +
Sbjct: 11 IKRGIALHNLNHYQEAVESYD-------------------KALQIPDDDALSGYR--YKR 49
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AW RG A + L +AI+ KAL+ P+ + + RG K + A+E
Sbjct: 50 NSDKAWAWANRGIALSDLKRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALE 109
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + A+ + G L+ +G +K+ E + KA+Q++ N+ E W L
Sbjct: 110 SFDKAIQINPDYDEAWAFYGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTL 169
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+E + L I + +A++ RGL L+ L ++++AI
Sbjct: 170 GCHKEAIESYNKALQIKPDYHEAWYNRGLALYYLKRYQEAI 210
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALE-----------FEPNS--ADILHERGIVNFKF 496
+ W +RG A L EA++ KAL+ ++ NS A RGI
Sbjct: 8 QTWIKRGIALHNLNHYQEAVESYDKALQIPDDDALSGYRYKRNSDKAWAWANRGIALSDL 67
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
K + A+E ++++ ++ A+ G AL +G Y++A E+ KAIQ++ ++ EAW
Sbjct: 68 KRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQINPDYDEAWAF 127
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+L ++ +E + L I+ + + ++ RGL+L LG HK+AI+
Sbjct: 128 YGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIE 177
>gi|124006078|ref|ZP_01690914.1| TPR repeat [Microscilla marina ATCC 23134]
gi|123988255|gb|EAY27908.1| TPR repeat [Microscilla marina ATCC 23134]
Length = 316
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++ G+A GKY AI + + + P Y +A G + + E AI + +A
Sbjct: 8 DIWINLGVAYEGLGKYEDAIVAYQKAIGIRPNYEKAWFNLGVNYEWLDKYEEAIIAYQKA 67
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P AW G LG+ +AI KA+E PN G+ +
Sbjct: 68 IEIKPGYENAWINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVTYDDLGKYED 127
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ + A+ LG+ S+G+Y A A+ KAI + +F +AW +L Y
Sbjct: 128 AIVAYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIKPDFEQAWINLGVTY 187
Query: 562 QDLANSEKALECLQQVL 578
DL N E+A+ Q+ +
Sbjct: 188 DDLNNYEEAIVAYQKAI 204
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-FNAAVE 504
P+ + W G A LG+ +AI KA+ PN G VN+++ D + A+
Sbjct: 4 PNDEDIWINLGVAYEGLGKYEDAIVAYQKAIGIRPNYEKAWFNLG-VNYEWLDKYEEAII 62
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ ++A+ LG+ +G+Y A A+ KAI+++ NF +AW +L Y DL
Sbjct: 63 AYQKAIEIKPGYENAWINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVTYDDL 122
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ Q+ + I + KA+ G++ LG++ AI
Sbjct: 123 GKYEDAIVAYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAI 163
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G+ GKY AI+ + + ++ +P + +A G + E AI + AI+
Sbjct: 79 INLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVTYDDLGKYEDAIVAYQRAIEI 138
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ +AW G +LG+ +AI KA+ +P+ G+ ++ A+
Sbjct: 139 RPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIKPDFEQAWINLGVTYDDLNNYEEAIV 198
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + NK +G G+ + A+ ++I+L + + +L Y
Sbjct: 199 AYQKAIEFNSANKELLLDIGWLYFIQGKSQSAKPYFEQSIELSHSQM----NLGHVYLTE 254
Query: 565 ANSEKALECLQQVL 578
+++KA+E QQ L
Sbjct: 255 GDAQKAMEFYQQSL 268
>gi|298675989|ref|YP_003727739.1| hypothetical protein Metev_2116 [Methanohalobium evestigatum
Z-7303]
gi|298288977|gb|ADI74943.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
Length = 461
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI Q Y A+ +++ +K +P +G Q E A+ + +++ NP
Sbjct: 240 KGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYILKIQEHSEKALDSYNNSLELNP 299
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G G+ EA++ +K+LE PN + + + +G + K + +N A+E
Sbjct: 300 EYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFLLTKMQMYNEALEAY 359
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ E++ T GL + +G+Y KA +A+ KA+ ++ + AW +++ Y L +
Sbjct: 360 NKSLELNPEDEVTLTSKGLIYTYMGQYNKALKAYDKALNINPKYANAWYNMSCVYSLLDD 419
Query: 567 SEKALECLQQVLYIDKRF 584
++ AL L+ + D +
Sbjct: 420 ADSALLYLKFAIEYDSYY 437
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI KY A+ +D+ L+ +P A I +G E A+ F +AI
Sbjct: 170 IEKGILYDGLEKYEKALESYDKALEINPDNETAWINKGHTLNKLERYEDALKAFNKAITI 229
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAV 503
NP E W +G + L +A+Q ++A++ P S ++G + K ++ + A+
Sbjct: 230 NPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYI-LKIQEHSEKAL 288
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ + ++L+ E A+ Y G L G+Y +A +A+ K+++L+ N W +
Sbjct: 289 DSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFLLTK 348
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +ALE + L ++ +GL+ +GQ+ KA+K
Sbjct: 349 MQMYNEALEAYNKSLELNPEDEVTLTSKGLIYTYMGQYNKALK 391
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 99/222 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GIA +Y A FD+ K P A +G + + A+ F +A
Sbjct: 102 IGKGIALTALERYEEATEAFDEAAKISPEDSVAWKSKGLSLKNLNHYDLALETFKKASDL 161
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP W +G L + +A++ KALE P++ +G K + + A++
Sbjct: 162 NPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPDNETAWINKGHTLNKLERYEDALK 221
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++ +N+ + Y G+ + Y+ A +++ +AI+L+ W +
Sbjct: 222 AFNKAITINPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYILKIQ 281
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+SEKAL+ L ++ + A+ +G +L G++ +A+K
Sbjct: 282 EHSEKALDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALK 323
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 102/221 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G++ N Y A+ F + +P I +G + E A+ + +A++ N
Sbjct: 137 SKGLSLKNLNHYDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEIN 196
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G L +A++ +KA+ P++ + +GIV K + A++
Sbjct: 197 PDNETAWINKGHTLNKLERYEDALKAFNKAITINPDNEETWDYKGIVQEKLNLYEDALQS 256
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ E+ + G L +KA +++ +++L+ + AW + ++
Sbjct: 257 YNRAIKLNPESGYFWAKKGYILKIQEHSEKALDSYNNSLELNPEYDLAWFYKGTILEEFG 316
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++AL+ + L ++ S ++ +G LL + + +A++
Sbjct: 317 KYDEALKAYNKSLELNPNKSIVWYNKGFLLTKMQMYNEALE 357
>gi|425448714|ref|ZP_18828558.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 7941]
gi|389763994|emb|CCI09600.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 7941]
Length = 317
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 5/244 (2%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+S+ + + L GI Q+ G Y A+ F+Q L+++ A R + ++ A
Sbjct: 43 QSVHLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLDAWQ 102
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 103 DCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQAAM 162
Query: 497 KDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 163 KNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNNA 222
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ +L L +++ L + + ID ++ AY RGLL H LG ++ A+ DL+ G
Sbjct: 223 SAYYNLACTAHQLGEYNRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQG 282
Query: 612 SRTM 615
+ +
Sbjct: 283 ANHL 286
>gi|254780436|ref|YP_003064849.1| hypothetical protein CLIBASIA_01605 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040113|gb|ACT56909.1| hypothetical protein CLIBASIA_01605 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 298
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+R + + G AI + LK +P Y A IGRG +R +L+ A +DF AIQ
Sbjct: 108 NRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQ 167
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAA 502
S G AW R GE ++I+D S+A+ + S D + RGI K++++A
Sbjct: 168 LKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSA 227
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + LD + S + G+ G Y A + + KA+ +D + A + + Q
Sbjct: 228 LEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRYYRAKNGILRISQ 287
Query: 563 DLANS 567
DL+++
Sbjct: 288 DLSST 292
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+++ P PE RG + E A+ DF A+ NP + + R R +G+
Sbjct: 61 VIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVP 120
Query: 467 EAIQDLSKALEFEPNSADILHERGIV--NFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI+D AL+ P+ RG + + ++ D A D ++L + A+
Sbjct: 121 MAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRA 180
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
L GEY+K+ E +AI L + + + Y N + ALE + + +D +
Sbjct: 181 LVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK 240
Query: 584 FSKAYHLRGLLLHGLGQHKKAIK 606
+ + G++ G + A+K
Sbjct: 241 KASFWFNGGMVYEMQGSYANAVK 263
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
++G V I L+ + P+ + + RG+V DF A+ D + + L+ Y
Sbjct: 48 SMGRRVN-IDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVY 106
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD--LANSEKALECLQQVL 578
L +G+ A + A++++ ++ A+ Y+D ++ +KA + +
Sbjct: 107 ANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAI 166
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +A++ R L+ G+++K+I+D S
Sbjct: 167 QLKTSDGRAWYGRALVYQMRGEYEKSIEDFS 197
>gi|373499196|ref|ZP_09589689.1| hypothetical protein HMPREF0402_03562 [Fusobacterium sp. 12_1B]
gi|371959573|gb|EHO77258.1| hypothetical protein HMPREF0402_03562 [Fusobacterium sp. 12_1B]
Length = 246
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG+ + + E A+ DF +AI+ N A+ RG + +L +AI D +KA
Sbjct: 38 EIYYNRGSNKYKLNDYEGAMLDFNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNKA 97
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +P A + RG+V + K + A+ D + ++LD E AY G A +S+ +Y +
Sbjct: 98 IKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNE 157
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI+LD A+ + DL N A+ + + ++ +F+KAY+ RGL
Sbjct: 158 AILDFNKAIELDPENSSAYYNRGIAKHDLKNYIGAILDYHKAIKLNPKFAKAYYNRGLAR 217
Query: 596 HGLGQHKKAIKDLSSGSRTMMPHL 619
+ L + A D + + P L
Sbjct: 218 YKLKNYIGANSDFKKANE-LNPEL 240
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKED 411
E SNE ++ T IS SVDF+ +RG + Y A+ F++ ++ +
Sbjct: 19 EKSNEKEK------TEIS-----SVDFKEAEIYYNRGSNKYKLNDYEGAMLDFNKAIELN 67
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
+ A + RG + + E AI D+ +AI+ +P + RG + L + EAI D
Sbjct: 68 SDFTYAYVFRGLVKDSLKNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELKQYKEAILD 127
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+KA+E + A + RG K +N A+ D + ++LD EN SAY G+A +
Sbjct: 128 YNKAIELDSEYAKAYNNRGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNRGIAKHDLK 187
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
Y A + KAI+L+ F +A+
Sbjct: 188 NYIGAILDYHKAIKLNPKFAKAY 210
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+K+ ++ DF + RG+ + + + AI +++ +K DP Y RG + +
Sbjct: 60 FNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELK 119
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI D+ +AI+ + +A+ RG A+ +L + EAI D +KA+E +P ++ + R
Sbjct: 120 QYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNR 179
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
GI K++ A+ D +KL+ + AY GLA + Y A KA +L+
Sbjct: 180 GIAKHDLKNYIGAILDYHKAIKLNPKFAKAYYNRGLARYKLKNYIGANSDFKKANELN 237
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K F + +K+I +D + + RG+ + +Y AI +++ ++ D Y +A
Sbjct: 85 KNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNN 144
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG+A+ ++ AI DF +AI+ +P A+ RG A+ L + AI D KA++ P
Sbjct: 145 RGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNRGIAKHDLKNYIGAILDYHKAIKLNP 204
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A + RG+ +K K++ A D +L+ E K+ Y
Sbjct: 205 KFAKAYYNRGLARYKLKNYIGANSDFKKANELNPELKNPY 244
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 66/129 (51%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+I + RG +K D+ A+ D + ++L+ + AY + GL S+ ++ A + K
Sbjct: 37 AEIYYNRGSNKYKLNDYEGAMLDFNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNK 96
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+LD + + + +L ++A+ + + +D ++KAY+ RG + L ++
Sbjct: 97 AIKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYN 156
Query: 603 KAIKDLSSG 611
+AI D +
Sbjct: 157 EAILDFNKA 165
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRN-------WSKAIRILDS 61
++Y+LN + + ++ + ++S A R L K SL+N ++KAI+ LD
Sbjct: 46 NKYKLNDYEGAMLDFNKAIELNSDFTYAYVFR-GLVK-DSLKNFEDAILDYNKAIK-LDP 102
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
A +Y NR ++L+ +K I D +KA++LD +AY +G A ++L + E
Sbjct: 103 KYALTY-----YNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNE 157
Query: 122 ALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNA 181
A+ D + +EL+ ++A +R + ++D+ N + ++ +
Sbjct: 158 AI--------------LDFNKAIELDPENSSAYYNRGI-AKHDLKNYIGAILDYHKAIKL 202
Query: 182 NDKMSETSEN 191
N K ++ N
Sbjct: 203 NPKFAKAYYN 212
>gi|334341206|ref|YP_004546186.1| polysaccharide deacetylase [Desulfotomaculum ruminis DSM 2154]
gi|334092560|gb|AEG60900.1| polysaccharide deacetylase [Desulfotomaculum ruminis DSM 2154]
Length = 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG+A N G+Y A++ +D+ ++ +P +P+ G+G + +I+++T++ +
Sbjct: 276 LSRGMAYDNLGRYELALADYDKAIEINPEFPDPYNGKGYIYNKLGQQTESIANYTKSCEL 335
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---ADILHERGIVNFKFKDFNA 501
P+ + R + +GE +AI DL+K +E +PN A +++G K ++
Sbjct: 336 APTFPYPFNNRAKVYVEIGEYDKAIGDLNKVIEMDPNFPYLASTYNKKGYAYAKLGNYQQ 395
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D S ++L+ + AY G G+ + AE +AI+LD N + +L+ Y
Sbjct: 396 ALADCSKSIELNADYADAYNSRGYTYYHSGQAELAETDLNRAIELDPNQPLYYFNLSNVY 455
Query: 562 QDLANSEKALECLQQVL 578
+ L KA L++VL
Sbjct: 456 KTLGQEYKAEASLKKVL 472
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I + G+Y + ++ + +P+ +A + RG A E A++D+ +AI+ NP
Sbjct: 246 ILRFKPGQYDNNLAAGFNAVDLNPLDEKAYLSRGMAYDNLGRYELALADYDKAIEINPEF 305
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+ + +G LG+ E+I + +K+ E P + R V + +++ A+ DL+
Sbjct: 306 PDPYNGKGYIYNKLGQQTESIANYTKSCELAPTFPYPFNNRAKVYVEIGEYDKAIGDLNK 365
Query: 509 CVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D S Y G A + +G Y++A K+I+L+ ++ +A+ Y
Sbjct: 366 VIEMDPNFPYLASTYNKKGYAYAKLGNYQQALADCSKSIELNADYADAYNSRGYTYYHSG 425
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+E A L + + +D Y + LGQ KA
Sbjct: 426 QAELAETDLNRAIELDPNQPLYYFNLSNVYKTLGQEYKA 464
>gi|431895643|gb|ELK05069.1| Tetratricopeptide repeat protein 13 [Pteropus alecto]
Length = 465
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL++A++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 3 QILSPLGRISEAVSDLTRAIQLQP-SARLYRHRGTLYFMSEDYATAHEDPQLSLELNRNQ 61
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L +D+ + LRG+LL+ G + A++
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSF 153
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P A++ +G + L+ AI F EA++ +A+K GQA LG A + K
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL + N L RG++ + A+ C++L+ N+ GL+ ++G++
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181
Query: 535 KAEEAHLKAI 544
+ +A K +
Sbjct: 182 EGVKAQTKVM 191
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+SD T AIQ PSA ++ RG + A +D +LE N + +G+
Sbjct: 14 AVSDLTRAIQLQPSA-RLYRHRGTLYFMSEDYATAHEDPQLSLELNRNQPIAMLYKGLTF 72
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A+E +K + AY LG A +G ++ A E+ KA+ LD+N ++
Sbjct: 73 FHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLDQNHVQT 132
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ AL ++ L ++ +++GL +GQ + +K
Sbjct: 133 LQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGVK 185
>gi|428772263|ref|YP_007164051.1| hypothetical protein Cyast_0422 [Cyanobacterium stanieri PCC 7202]
gi|428686542|gb|AFZ46402.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 494
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +++Q L+ + P+ +G + + + + AI DF+ AI + + ++ RG A
Sbjct: 221 AIDVYNQGLQLEDKNPQLYFLKGVSCWKKGDYQGAIKDFSRAIDLDKNYLLPYQWRGFAY 280
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A+QD + ++ + S ++R ++ K ++ A++D S C+ ++ + A
Sbjct: 281 TYFQKYDLALQDYEEEIKIDSVSFWGYYKRAFIHAKLGNYLQALDDYSICLTINPKCFYA 340
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G + +Y A E + + + L+ + E + +L YQ L N + + C ++ L
Sbjct: 341 YCNRGFVYFQLKDYHDAIEDYNRVLSLNPSLFEVYYNLGCIYQILGNHSQCISCYKESLK 400
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
I+ R+ K Y +L LGQ KAI L T+ P+ I
Sbjct: 401 INPRYEKPYFNLAILQADLGQFPKAIA-LYDKILTLNPNFI 440
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV------- 125
CNR F Y QL+ + I D ++ L L+P+L + Y GC + LG + +S
Sbjct: 342 CNRGFVYFQLKDYHDAIEDYNRVLSLNPSLFEVYYNLGCIYQILGNHSQCISCYKESLKI 401
Query: 126 ---WEKGYEHALHQSADLKQF 143
+EK Y + ADL QF
Sbjct: 402 NPRYEKPYFNLAILQADLGQF 422
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+F+ KDF+ A++ + ++L+ +N Y G++ G+Y+ A + +AI LD+N+L
Sbjct: 212 HFQKKDFDLAIDVYNQGLQLEDKNPQLYFLKGVSCWKKGDYQGAIKDFSRAIDLDKNYLL 271
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y + AL+ ++ + ID Y+ R + LG + +A+ D S
Sbjct: 272 PYQWRGFAYTYFQKYDLALQDYEEEIKIDSVSFWGYYKRAFIHAKLGNYLQALDDYS 328
>gi|398814140|ref|ZP_10572823.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
gi|398037084|gb|EJL30286.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
Length = 731
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ V ++ A F Q+++ D YPE RG + L+ A+ D+ +AI+ +
Sbjct: 449 NKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLS 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A LG+ +A+ D L+ +P + D L R + ++ + F A +D
Sbjct: 509 PPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ LGL S G +A + A+ DR + AW + Y ++
Sbjct: 569 AEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++A+ L + + ++K + Y+ R + G+ + +I D +
Sbjct: 629 EYDRAIADLTEAIALEKNATVLYN-RAWVYEAQGEWQLSISDYTEA 673
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+F + S+ I +D + RG G+ A+ ++Q +K P +PE
Sbjct: 458 KRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLSPPFPEVYFN 517
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R TA ++E A++D+ + +P + R + + A +D LE EP
Sbjct: 518 RATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEP 577
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A +L G++ + + A++ +A + D+E +A+T + +GEY +A
Sbjct: 578 DHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMGEYDRAIADL 637
Query: 541 LKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+AI L++N + AW + Q L+ S+ + + + D Y+ RGL
Sbjct: 638 TEAIALEKNATVLYNRAWVYEAQGEWQLSISDYT----EALAFSDADEQDIYYRRGLCFI 693
Query: 597 GLGQHKKAIKD 607
+G + +D
Sbjct: 694 KMGDRELGTED 704
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 83/194 (42%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + E A F++ IQ + + E + RG + +G EA++D ++A++
Sbjct: 447 LHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIK 506
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P ++ R + D A+ D + +D EN L + +++ A
Sbjct: 507 LSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMAR 566
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ ++++ + L N+++AL+ L D+ A+ R +L +
Sbjct: 567 KDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYE 626
Query: 598 LGQHKKAIKDLSSG 611
+G++ +AI DL+
Sbjct: 627 MGEYDRAIADLTEA 640
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%)
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+LH +G++ K F A E S +++D Y G S +G +A E + +AI
Sbjct: 446 LLHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAI 505
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L F E + + + L + EKA+ +L ID R LL+ + + + A
Sbjct: 506 KLSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMA 565
Query: 605 IKDLSSG 611
KD G
Sbjct: 566 RKDAEFG 572
>gi|422304613|ref|ZP_16391955.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9806]
gi|389790204|emb|CCI13881.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9806]
Length = 917
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG ++ E A+ DF +AI NP+ A+ RG + + A+ D ++A+ P
Sbjct: 702 RGLVYQDLQKYELALDDFNKAIDLNPNLAMAYNNRGNIYSNQQKYDLALSDYNQAIRINP 761
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + RG++ + K + A+ D + ++LD + AY GL +Y+ A
Sbjct: 762 NYANAYYNRGLLYYYQKKYELALADFNKAIELDSKLAMAYLNRGLLYYYQQKYELALADF 821
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+LD N A+ + Y DL + AL + + ++ F++AY RGLL L Q
Sbjct: 822 NKAIELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIELNPNFAEAYANRGLLYAELKQ 881
Query: 601 HKKAIKDL 608
+KA DL
Sbjct: 882 TEKAKIDL 889
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + KY A+ F++ + +P A RG + Q++ + A+SD+ +AI+ N
Sbjct: 701 NRGLVYQDLQKYELALDDFNKAIDLNPNLAMAYNNRGNIYSNQQKYDLALSDYNQAIRIN 760
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + A+ D +KA+E + A RG++ + + + A+ D
Sbjct: 761 PNYANAYYNRGLLYYYQKKYELALADFNKAIELDSKLAMAYLNRGLLYYYQQKYELALAD 820
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + AY G+ S + +Y A KAI+L+ NF EA+ + Y +L
Sbjct: 821 FNKAIELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIELNPNFAEAYANRGLLYAELK 880
Query: 566 NSEKALECLQQ 576
+EKA LQQ
Sbjct: 881 QTEKAKIDLQQ 891
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N+ KY A+S ++Q ++ +P Y A RG +Q++ E A++DF +AI+ +
Sbjct: 735 NRGNIYSNQQKYDLALSDYNQAIRINPNYANAYYNRGLLYYYQKKYELALADFNKAIELD 794
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG + A+ D +KA+E + N A + RG++ + ++ A+ D
Sbjct: 795 SKLAMAYLNRGLLYYYQQKYELALADFNKAIELDSNDAVAYNNRGVLYSDLQKYDLALSD 854
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ AY GL + E K+ E+A + L+ L + ++A
Sbjct: 855 WNKAIELNPNFAEAYANRGLLYA---ELKQTEKAKID--------LQQAAILFRQQNNMA 903
Query: 566 NSEKALECLQQV 577
E+ ++ LQQ+
Sbjct: 904 TYEQVMQILQQL 915
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 22/256 (8%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE-DP--MYPEALIGRGTARAFQR 429
I + + D + RG G+Y AI FD+ +K+ DP +Y A G+G A + +
Sbjct: 536 IVPNTTAKADIWIERGGQLWRLGRYEEAIKAFDEAIKQNDPKNVY-LAWYGKGLALWYWK 594
Query: 430 EL--------EAAISDFTEAIQSNPSAGEAWKRRG----QARAALGESVE----AIQDLS 473
L + AI +AI + P GE K Q ++ + S+E A+ ++
Sbjct: 595 GLALFALDKDQPAIEALQQAINTLPK-GEDLKNFHSSILQQQSVVYRSLENYEQALTVIN 653
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+A+ PN+ + +E+ +V + K ++ + ++ + L + Y GL + +Y
Sbjct: 654 QAISLFPNNPNYYNEKYVVLSELKRYDEGLATINQAIHL-APRAAWYNNRGLVYQDLQKY 712
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + KAI L+ N A+ + Y + + AL Q + I+ ++ AY+ RGL
Sbjct: 713 ELALDDFNKAIDLNPNLAMAYNNRGNIYSNQQKYDLALSDYNQAIRINPNYANAYYNRGL 772
Query: 594 LLHGLGQHKKAIKDLS 609
L + +++ A+ D +
Sbjct: 773 LYYYQKKYELALADFN 788
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A++ +AI P+ + + + L E + +++A+ P +A + RG+
Sbjct: 646 EQALTVINQAISLFPNNPNYYNEKYVVLSELKRYDEGLATINQAIHLAPRAA-WYNNRGL 704
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + + A++D + + L+ AY G S+ +Y A + +AI+++ N+
Sbjct: 705 VYQDLQKYELALDDFNKAIDLNPNLAMAYNNRGNIYSNQQKYDLALSDYNQAIRINPNYA 764
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y E AL + + +D + + AY RGLL + +++ A+ D +
Sbjct: 765 NAYYNRGLLYYYQKKYELALADFNKAIELDSKLAMAYLNRGLLYYYQQKYELALADFN 822
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + +K+I +D +L+ RG+ + KY A++ F++ ++ D A
Sbjct: 778 KKYELALADFNKAIELDSKLAMAYLNRGLLYYYQQKYELALADFNKAIELDSNDAVAYNN 837
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
RG + ++ + A+SD+ +AI+ NP+ EA+ RG A L ++ +A DL +A
Sbjct: 838 RGVLYSDLQKYDLALSDWNKAIELNPNFAEAYANRGLLYAELKQTEKAKIDLQQA 892
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQ 65
Y K + + ++ + +DS +A A R L +L +++KAI LDS A
Sbjct: 775 YYQKKYELALADFNKAIELDSKLAMAYLNRGLLYYYQQKYELALADFNKAIE-LDSNDAV 833
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+Y NR YS L+ + + D +KA++L+P +AY +G ++ L + E+A
Sbjct: 834 AYN-----NRGVLYSDLQKYDLALSDWNKAIELNPNFAEAYANRGLLYAELKQTEKA 885
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 20 ICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEIQDICN 74
+ + ++ +R++ A+A R L +L +++KAI LDS LA +Y N
Sbjct: 750 LSDYNQAIRINPNYANAYYNRGLLYYYQKKYELALADFNKAIE-LDSKLAMAY-----LN 803
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R Y + ++ + D +KA++LD AY +G +S L + + ALS W K E
Sbjct: 804 RGLLYYYQQKYELALADFNKAIELDSNDAVAYNNRGVLYSDLQKYDLALSDWNKAIE 860
>gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823]
gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 364
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
K T I K K S + RG A Y + +++ ++ D P+A GT +
Sbjct: 104 KTFTTLIEKQKGYSKAY-FQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKF 162
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
Q++ AAI FT++I+ +PS+ A+ RG +AI+D AL PN A +L
Sbjct: 163 LQQDYNAAIKYFTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEAALRKNPNLAFVL 222
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G K KD++ A+ + + +D AY G+AL G A + KA+Q+
Sbjct: 223 NNVGTTKKKMKDYSGALIAFNRAISVDVNFFLAYNNRGVALLEKGSLDDAIKDFEKAMQI 282
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ + A +L Y + +KA E + + ID ++ AY RG+
Sbjct: 283 NPKYAPAASNLAGIYFKRKDFKKAEELASKAIAIDPNYASAYVNRGM 329
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI N+ + AI F++ + DP + A +G A A+ FT I+
Sbjct: 54 NKGIELFNKKNFKEAIGSFNKSISSDPNFTAAYYNKGVAENEAEMYMDALKTFTTLIEKQ 113
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ +RG+A L + +++ +D +++ + N+ + G + F +D+NAA++
Sbjct: 114 KGYSKAYFQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNAAIKY 173
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + AY G Y KA E + A++ + N ++ + +
Sbjct: 174 FTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEAALRKNPNLAFVLNNVGTTKKKMK 233
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ AL + + +D F AY+ RG+ L G AIKD
Sbjct: 234 DYSGALIAFNRAISVDVNFFLAYNNRGVALLEKGSLDDAIKDF 276
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + Y AI ++ L+++P L GT + ++ A+ F AI +
Sbjct: 191 RGSCYRMQENYPKAIEDYEAALRKNPNLAFVLNNVGTTKKKMKDYSGALIAFNRAISVDV 250
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A G +AI+D KA++ P A + FK KDF A E
Sbjct: 251 NFFLAYNNRGVALLEKGSLDDAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELA 310
Query: 507 SACVKLDKENKSAYTYLGLA 526
S + +D SAY G+A
Sbjct: 311 SKAIAIDPNYASAYVNRGMA 330
>gi|16329409|ref|NP_440137.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803]
gi|383321150|ref|YP_005382003.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. GT-I]
gi|383324320|ref|YP_005385173.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|383490204|ref|YP_005407880.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|384435470|ref|YP_005650194.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803]
gi|451813568|ref|YP_007450020.1| outer membrane 72K protein [Synechocystis sp. PCC 6803]
gi|1651890|dbj|BAA16817.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803]
gi|339272502|dbj|BAK48989.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803]
gi|359270469|dbj|BAL27988.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. GT-I]
gi|359273640|dbj|BAL31158.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|359276810|dbj|BAL34327.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|451779537|gb|AGF50506.1| outer membrane 72K protein [Synechocystis sp. PCC 6803]
Length = 266
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+DFTE+I+ N +A+ RG A+ LG+ AI D ++A+ P A L
Sbjct: 56 QNFSGAIADFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISLNPEFAYALGN 115
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R F ++ A++D S ++++ Y Y G + S +G A + AI+++
Sbjct: 116 RCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIRINA 175
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + + L ++AL Q + +D ++AY RGL + LG KAI DL
Sbjct: 176 QHANAYYNRALTHNRLKQDQQALADYNQSIQLDPDSAEAYFNRGLTQYRLGDEPKAIADL 235
Query: 609 SSGS 612
+ +
Sbjct: 236 TKAA 239
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A+ G+Y +AI+ ++Q + +P + AL R A + + AI D +
Sbjct: 76 ADAYYNRGYAKHVLGQYQAAITDYNQAISLNPEFAYALGNRCYAYFLLSQYDKAIQDCSN 135
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ + + RG +++ LG AI D + A+ A+ + R + + + K
Sbjct: 136 AIEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIRINAQHANAYYNRALTHNRLKQDQ 195
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+ D + ++LD ++ AY GL +G+ KA KA +L
Sbjct: 196 QALADYNQSIQLDPDSAEAYFNRGLTQYRLGDEPKAIADLTKAAEL 241
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G+ ++F+ A+ D + +KL+ ++ AY G A +G+Y+ A + +AI L
Sbjct: 46 YNDGVDKLAAQNFSGAIADFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISL 105
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ F A G+ Y L+ +KA++ + I+ ++ Y RG LG AI
Sbjct: 106 NPEFAYALGNRCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIA 165
Query: 607 DLSSGSRTMMPH 618
D + R H
Sbjct: 166 DYNDAIRINAQH 177
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ NR + Y L + I+DC A++++P Y+ +G + S LG + A++ +
Sbjct: 113 LGNRCYAYFLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIR 172
Query: 132 -HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
+A H +A + L L KQD+ +Y+ S
Sbjct: 173 INAQHANAYYNRALTHNRL----KQDQQALADYNQS 204
>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str.
Fusaro]
gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 1138
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L +G+A N +Y AIS + ++L +P EAL R A + + A++D+
Sbjct: 755 DALLGKGLALSNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRI 814
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P + + ALG E + LE PN+ +I++++G DF
Sbjct: 815 IKLQPENSQILAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEG 874
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV ++LD N AY G L + +Y++A + + KA++ + + AW Y
Sbjct: 875 AVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNVTAWYFQGCTY 934
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L++++ AL C + + + A++ +G + + +G+ ++A+
Sbjct: 935 LTLSSNKAALNCFNKTVQLKPDCITAWYNKGYIHNMMGETEEAV 978
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE--AIQ 443
S+G G+Y +AI+ +D+ L D IG + EAA+ + E +
Sbjct: 347 SKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNV-YEAALPSYPENPEFK 405
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
S+P+ + W + A L + AI+ K LE E A + + +G+ + + A+
Sbjct: 406 SSPTV-KIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEEAI 464
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E +KLD + GL S I +YK A E++ KA+++D N+ W
Sbjct: 465 ECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFALAK 524
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L E +L C +VL + A++ +GL+L LG+H +A
Sbjct: 525 LGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGKHAEA 565
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 34/254 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + KY AI D L P E L +G + E AI + +AI NP
Sbjct: 212 QGMAYLGLEKYPEAIEYLDSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNP 271
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G +G EA+ L EP + D+L +G+ K + A++
Sbjct: 272 DLVNAWHNKGVNLEKMGIYDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCY 331
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR---------------NFL 551
+ D + A+ G L+ G+Y A + KA+ D N
Sbjct: 332 DEVLVYDPGSSEAWYSKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNVY 391
Query: 552 EA-------------------WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
EA W + L E A+EC +VL + + ++L+G
Sbjct: 392 EAALPSYPENPEFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKG 451
Query: 593 LLLHGLGQHKKAIK 606
L L LG++++AI+
Sbjct: 452 LDLERLGRYEEAIE 465
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + GK A++ +++ L P+ PE +G AI+ + ++ +N
Sbjct: 110 KGCSLAELGKNDQAVNCYEKALSTFPVSPENWYNKGNKHLELNNYVEAINFYDKSFAANT 169
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W R+ A LG E++ K++E NS+ L +G+ + + A+E L
Sbjct: 170 YLSTVWYRKALASEQLGLDQESLNSYDKSIELNSNSSSSLQMQGMAYLGLEKYPEAIEYL 229
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---------- 556
+ + + +N G+ L G+Y+ A + + KAI + + + AW +
Sbjct: 230 DSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGI 289
Query: 557 ----LTQF--------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
LT + + L +++AL+C +VL D S+A++ +G
Sbjct: 290 YDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKG 349
Query: 593 LLLHGLGQHKKAI 605
LL+ GQ+ AI
Sbjct: 350 SLLNKTGQYDAAI 362
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ + + L DP AL G + +LE A+S + + + N S +A +G A
Sbjct: 705 ALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGLAL 764
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ L EAI +K L EP + + L R K N A+ D +KL EN
Sbjct: 765 SNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRIIKLQPENSQI 824
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
L ++G Y++ + + +++ N E + ++ + E A+ C ++L
Sbjct: 825 LAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRILE 884
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRW 626
+D AY+ +G +L+ L ++++AI D + P N+T W
Sbjct: 885 LDPGNVGAYNNKGFVLYKLEKYQQAI-DCYDKALEYSPD---NVTAW 927
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 136/310 (43%), Gaps = 28/310 (9%)
Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKF--- 368
++LN + N+E + + +KS D + +SF D++ N+ +K
Sbjct: 231 SALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGIY 290
Query: 369 -----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
C + S+ ++D +G+ G+ A+ +D++L DP EA +G+
Sbjct: 291 DEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKGS 350
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+ +AAI+ + +A+ NP G + G +S+E + AL P +
Sbjct: 351 LLNKTGQYDAAIACYDKAL--NPDTGVQVEEIGS------DSLEQLNVYEAALPSYPENP 402
Query: 484 D--------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ I +E+ + K + + +A+E ++ + + + GL L +G Y++
Sbjct: 403 EFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEE 462
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A E + +A++LD + + W + + + A+E + L ID+ ++ + + L
Sbjct: 463 AIECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFAL 522
Query: 596 HGLGQHKKAI 605
LG+++ ++
Sbjct: 523 AKLGEYESSL 532
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 34/254 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G Y +AI +D+ + +P A +G + A++ + + S P
Sbjct: 246 KGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGIYDEALTCYEFVLLSEP 305
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +R+G LG + EA+Q + L ++P S++ + +G + K ++AA+
Sbjct: 306 ENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKGSLLNKTGQYDAAIACY 365
Query: 507 SACVKLD-----------------------------KENKSAYTYL-----GLALSSIGE 532
+ D E KS+ T LA + +
Sbjct: 366 DKALNPDTGVQVEEIGSDSLEQLNVYEAALPSYPENPEFKSSPTVKIWYEKALAFDKLEK 425
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A E + K ++ + W + L E+A+EC + L +D ++K ++ +G
Sbjct: 426 YESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEEAIECYGRALKLDSGYAKVWYRKG 485
Query: 593 LLLHGLGQHKKAIK 606
L + +K A++
Sbjct: 486 LDSSKIKDYKDAVE 499
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+ D Y A G+ + + A++ + + NP+ EAW +G L S
Sbjct: 644 LFSPDISYDAAWYGKASIYGKLGMYDDALNSYDMVLAINPARAEAWYEKGSILDRLDRSE 703
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA++ KAL+ +P S+ L+ AV + L+ N A GLA
Sbjct: 704 EALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGLA 763
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEA 553
LS++ Y +A + K + + LEA
Sbjct: 764 LSNLSRYDEAISCYTKLLNSEPENLEA 790
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 79/185 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + + + +G A N G + A+ +D+IL+ DP A +G
Sbjct: 844 CYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRILELDPGNVGAYNNKGFVLYKL 903
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + +A++ +P AW +G L + A+ +K ++ +P+ +
Sbjct: 904 EKYQQAIDCYDKALEYSPDNVTAWYFQGCTYLTLSSNKAALNCFNKTVQLKPDCITAWYN 963
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G ++ + AV + + + SA AL ++ + +A K ++D
Sbjct: 964 KGYIHNMMGETEEAVSCYDNVLAISPNSPSALYNKRFALYTLKKLDEAAACKAKLDEIDP 1023
Query: 549 NFLEA 553
F++A
Sbjct: 1024 GFVDA 1028
>gi|427724351|ref|YP_007071628.1| hypothetical protein Lepto7376_2520 [Leptolyngbya sp. PCC 7376]
gi|427356071|gb|AFY38794.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 324
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKE-DPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
L RG+ G+ A+ FD+IL +P AL+ RG A A E A+ DFT AI
Sbjct: 106 LQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAIN 165
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
N EA+ RG L V+A+ D S A+E +P+ +RG + + A+
Sbjct: 166 LNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAI 225
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++ D EN +AY G+A+ G+Y+ A + +AI+ + A+G+ Y
Sbjct: 226 ADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEFNDKIAPAYGNRANIYAQ 285
Query: 564 LANSEKALECLQQV--LYIDK 582
A + QQ L++D+
Sbjct: 286 RGEYAAAKQDYQQAAQLFLDQ 306
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G Y A+ ++ P + +A RG AI+D+ A+Q + +
Sbjct: 41 GVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDAN 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +RG A GE+V+A++D + L PN+ L RG + A++D
Sbjct: 101 HEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDF 160
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ AY GL + +A + A+++D + + + Y+
Sbjct: 161 TGAINLNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNR 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++A+ L D + AY+LRG+ + GQ++ A D S
Sbjct: 221 IKEAIADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYS 263
>gi|217978433|ref|YP_002362580.1| hypothetical protein Msil_2286 [Methylocella silvestris BL2]
gi|217503809|gb|ACK51218.1| TPR repeat-containing protein [Methylocella silvestris BL2]
Length = 291
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 4/230 (1%)
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
++ ++ EA+ N +T + + S D +RG+A G+Y AI+ F Q +K P
Sbjct: 49 EVASQSPQEAQANIA-SLTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAP 107
Query: 413 MYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
+L R A R R +AA++DF AI ++ + A+ R A G+ A D
Sbjct: 108 T-AASLTNRALAYRQIGRN-DAALTDFNSAIAADANHAPAYLGRANLERASGDLPAAHAD 165
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
L A++ P +A H RG++ + + A+ D + D + Y G +L +IG
Sbjct: 166 LDSAIKLNPENAQAFHARGLIYQREGNHPQAITDFDNAIDRDPFAGAPYLARGQSLIAIG 225
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+Y KA E A+ +D +AW L Y+ N KA E + + D
Sbjct: 226 KYDKAIEDFNAALNVDNKNPDAWAGLGLAYEKSGNRAKASESYSRAIVFD 275
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E +A I+ T+ +Q NP++ +A+ RG A A G EAI D S+A++ P +A L
Sbjct: 56 QEAQANIASLTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAPTAAS-LTN 114
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + + +AA+ D ++ + D + AY LG A
Sbjct: 115 RALAYRQIGRNDAALTDFNSAIAADANHAPAY--LGRA---------------------- 150
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N A G L + DL + ++ ++A+H RGL+ G H +AI D
Sbjct: 151 NLERASGDLPAAHADL----------DSAIKLNPENAQAFHARGLIYQREGNHPQAITDF 200
>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
266]
gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3035
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A+ +FDQ + +P +P + RG A RA QR E A+ + +A+Q P +A+ RG
Sbjct: 863 ALVLFDQAISINPGHPGSRNNRGNALRALQR-YEEALDSYEKALQLKPDYVDAYTNRGSV 921
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ +A+ +P+ + + +V K + A+ ++L +++
Sbjct: 922 LLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPV 981
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y G L + Y++A ++ KAI L+ ++ EA+ +L + L E+AL ++ +
Sbjct: 982 VYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAI 1041
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ F+ AY+ R +L + L ++++A+
Sbjct: 1042 ALKPDFADAYYNRAVLFYDLDRYEEAL 1068
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSA 448
AQ NE + A+++FDQ L +P + +L RG A R+ QR E A+ F A+ P
Sbjct: 74 AQRNESE--KAVALFDQALNINPDHSGSLNNRGNALRSLQR-YEDALRSFERAVAVKPDY 130
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+A+ RG L +A++ KA+ +P+ A RG + A+
Sbjct: 131 ADAYINRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEK 190
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L+ AY GLAL + Y A E + +AI L ++ EA+ H + L E
Sbjct: 191 AIALNPCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYE 250
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AL + V+ ++ +AY RG L L ++ A+
Sbjct: 251 NALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDAL 287
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L R + EG+ A +I +IL P + +AL T A + + E A++ F +A+
Sbjct: 2273 KLQRALKLHQEGRLDEAEAICQEILSSIPEHFDALQLSATIAAQRHDSEKALALFDQALA 2332
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P + RG A L EA+ + L +P+ A RG + + AV
Sbjct: 2333 IKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAV 2392
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ L +N +AY+ G+A+ + Y A E+H KAI L ++ EA + Q+
Sbjct: 2393 SSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQE 2452
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L E+AL +Q + + +++ Y G +L L ++++A+
Sbjct: 2453 LKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEAL 2494
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+++FDQ L P + +L RG A + E A++ + + P A+ RG
Sbjct: 2323 ALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTL 2382
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EA+ +A+ ++A+ RG+ K K + A+E + L + A
Sbjct: 2383 QGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEA 2442
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G L + Y++A ++ +AI L ++ E + + ++L E+AL +Q +
Sbjct: 2443 CSNRGNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIA 2502
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ FS AY G L L +++ A+
Sbjct: 2503 LKPDFSDAYSNLGNTLQVLMRYRDAL 2528
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +A G A +++ IL ++P + +AL T A + E E A++ F +A+
Sbjct: 33 LHSALAFHQNGALDEAEALYQAILLQNPEHFDALQLLATIAAQRNESEKAVALFDQALNI 92
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + RG A +L +A++ +A+ +P+ AD RG V + A+E
Sbjct: 93 NPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALE 152
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L + AY G A+ ++ Y+ A ++ KAI L+ F +A+ + Q L
Sbjct: 153 SFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKL 212
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ALE +Q + + +++A+ +G + L +++ A+
Sbjct: 213 MRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENAL 253
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y A+ F++ + P Y +A I RG E A+ F +AI
Sbjct: 102 NRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALK 161
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A A+ +A+ KA+ P AD + +G+ K ++ A+E
Sbjct: 162 PDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALER 221
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ + G ++ Y+ A ++ I L+ + +EA+ + Q+L
Sbjct: 222 YKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTNRGYALQELK 281
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AL +VL + + AY+ RG L +++ A+
Sbjct: 282 RYGDALLSYDRVLALKCDDADAYNNRGNAFMALKRYEDAL 321
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R +RG A +Y A+ +++ L+ P Y +A RG+ + E A++ + AI
Sbjct: 881 RNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEALASYERAIA 940
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P E + AL EA+ + LE + + + RG V + K + A+
Sbjct: 941 IKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEAL 1000
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ L+ + AY+ LG+ + ++A ++ KAI L +F +A+ + + D
Sbjct: 1001 GSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYD 1060
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLL-------HGLGQHKKAI 605
L E+AL + + + F + + RG L LG ++KAI
Sbjct: 1061 LDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGSYEKAI 1109
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +Y A++ ++++L P Y A RG R E A+S + +AI
Sbjct: 2343 NRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAVSSYDQAIALR 2402
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A L +A++ KA+ P+ A+ RG + K + A+
Sbjct: 2403 SDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMS 2462
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + Y+ G L + Y++A + +AI L +F +A+ +L Q L
Sbjct: 2463 YKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYSNLGNTLQVLM 2522
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AL + + ++ +AY +G L L ++++A+
Sbjct: 2523 RYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEAL 2562
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 396 KYASAISIFDQIL---KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+Y A++ ++++L ++DP+ RG + E A+ + +AI NP EA+
Sbjct: 961 RYEEALATYERVLELRRDDPV---VYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAY 1017
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G R L EA+ KA+ +P+ AD + R ++ + + A+ + L
Sbjct: 1018 SNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVL 1077
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLA 565
+ ++ G AL + Y++A ++ KAI L +F +A+ + L ++ L
Sbjct: 1078 KPDFVEVFSNRGNALLKLKRYEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALW 1137
Query: 566 NSEKALEC 573
+ EK L C
Sbjct: 1138 SYEKTLAC 1145
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 3/225 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R K D ++RG + + A+ F++ + P Y A RG A
Sbjct: 122 RAVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRY 181
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A++ + +AI NP +A+ +G A L +A++ +A+ +P+ + +G
Sbjct: 182 EDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGN 241
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + + A+ + L+ ++ AYT G AL + Y A ++ + + L +
Sbjct: 242 VFMALQRYENALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDALLSYDRVLALKCDDA 301
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+A+ + + L E AL VL + + L GL L+
Sbjct: 302 DAYNNRGNAFMALKRYEDALGSYNHVLALKPDYD---FLSGLCLY 343
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 10/203 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + +Y A+ +++ + +P Y EA G R + E A+ + +AI
Sbjct: 985 NRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALK 1044
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R L EA+ +A+ +P+ ++ RG K K + A+
Sbjct: 1045 PDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGS 1104
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK--AIQLDRNFLEAWGHLTQ---- 559
+ L + A+ G AL + Y+ A ++ K A + D +FL + T+
Sbjct: 1105 YEKAIALKPDFADAFFNQGNALLELKRYEDALWSYEKTLACKPDYDFLSGFCLYTRMKIC 1164
Query: 560 ----FYQDLANSEKALECLQQVL 578
F + EK +EC ++V+
Sbjct: 1165 DWSAFEDQVHQLEKKIECHEKVV 1187
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S +DQ + A RG A + A+ +AI P EA R
Sbjct: 2387 RYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNR 2446
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + + A+ G V + K + A+ + + L +
Sbjct: 2447 GNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPD 2506
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY+ LG L + Y+ A ++ KAI L+ + +EA+ +L E+AL +
Sbjct: 2507 FSDAYSNLGNTLQVLMRYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEALVSYE 2566
Query: 576 QVLYIDKRFSKAYHLRGLLLH 596
+ L + + L GL L+
Sbjct: 2567 RALALKPEYD---FLPGLCLY 2584
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + +YA A+ D+ + P Y EA RG + E A+ + +AI
Sbjct: 2411 NRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMSYKQAIALK 2470
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E + G L EA+ + +A+ +P+ +D G + A+
Sbjct: 2471 SDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYSNLGNTLQVLMRYRDALAS 2530
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ L+ + AY G AL + Y++A ++ +A+ L +
Sbjct: 2531 YDKAIGLNPDCIEAYCGQGNALLELMRYEEALVSYERALALKPEY 2575
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R +K +S+ +L R + EG+ A +++ +IL P + +AL T A + +
Sbjct: 1620 RSTKEESV----KLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDS 1675
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F +A+ P + RG A L EA+ +A+ +P+ + RG
Sbjct: 1676 ENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVKPDFIEPYSNRGN 1735
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRN 549
+ K + A+ + + L + Y G AL + + A ++ KA+ L D +
Sbjct: 1736 TLQELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDEDAVRSYEKALALKPDYD 1795
Query: 550 FL 551
FL
Sbjct: 1796 FL 1797
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%)
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L F P D L + + D A+ + + ++ + G+AL + Y++
Sbjct: 1652 LSFSPEHFDALQLSATIAAQRHDSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEE 1711
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AI + +F+E + + Q+L E+AL C + + +++ Y+ +G L
Sbjct: 1712 ALASYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPDYAEPYYNQGNAL 1771
Query: 596 HGLGQHKKAIK 606
L + + A++
Sbjct: 1772 LELKRDEDAVR 1782
>gi|449119628|ref|ZP_21756024.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
gi|449122019|ref|ZP_21758365.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
gi|449131739|ref|ZP_21767926.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
gi|448938371|gb|EMB19304.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
gi|448949460|gb|EMB30285.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
gi|448950618|gb|EMB31440.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
Length = 370
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
I+ ++AY RG + L + +IKDL
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDL 282
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+SD AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SG 611
G
Sbjct: 318 EG 319
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +S +++ +++DP + RG + + AI D +++ NP+ E+ RG
Sbjct: 37 YQMNLSKYERQIEKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRG 96
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A+ + EAI D S+ +E PN + R +F DF A+ D+++ +KLD ++
Sbjct: 97 LIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALSDINSAIKLDPKD 156
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G + +Y A + +A++L+ +A+ FY+ + + AL +
Sbjct: 157 SLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYK 216
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + R + Y GL + L ++ AI
Sbjct: 217 ALKLKYRSNDIYFHIGLSCYALKEYDNAI 245
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|425466007|ref|ZP_18845310.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9809]
gi|443651790|ref|ZP_21130723.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159027487|emb|CAO89452.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389831626|emb|CCI25435.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9809]
gi|443334431|gb|ELS48943.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 266
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 72/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + Q++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELA 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S +T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 55 AESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTAL 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++L + AY G A +G+++ A + + +A QL NF A
Sbjct: 115 EGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWA 174
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +L +A++ ++ + F +L GQ +A
Sbjct: 175 QANLALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ P A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|312137039|ref|YP_004004376.1| hypothetical protein Mfer_0815 [Methanothermus fervidus DSM 2088]
gi|311224758|gb|ADP77614.1| Tetratricopeptide TPR_2 repeat protein [Methanothermus fervidus DSM
2088]
Length = 225
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++ +N G+++ A+ +++++L+EDP EAL G A F + E +I F E ++
Sbjct: 7 LNKASLLLNMGRFSDALYLYNKVLEEDPDNCEALNNSGIALLFLGKYEESIQYFDEVLKI 66
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+G AW + A LG EAI+ +ALE N
Sbjct: 67 KNDSG-AWINKSNALINLGRYEEAIECCDRALEIAIN----------------------- 102
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D E A G AL SI EY +A + + +A++++ N + W + + +
Sbjct: 103 --------DSEKVYALVNKGNALFSIDEYDEALDCYDEALKINPNDVGIWNNKGNLLKSM 154
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+EC + L ID R +++ + L L LG++++A+K
Sbjct: 155 GKYEEAIECFDKALEIDPRSIGSWYNKSLALEALGEYEEALK 196
>gi|425437858|ref|ZP_18818270.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9432]
gi|425450792|ref|ZP_18830615.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 7941]
gi|425459419|ref|ZP_18838905.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9808]
gi|389677054|emb|CCH93965.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9432]
gi|389768189|emb|CCI06613.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 7941]
gi|389822882|emb|CCI29353.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9808]
Length = 266
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A + + Q++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAENYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 59 WTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEG 118
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A +L
Sbjct: 119 KYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANL 178
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +A++ ++ + F +L GQ +A
Sbjct: 179 ALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|428224215|ref|YP_007108312.1| hypothetical protein GEI7407_0762 [Geitlerinema sp. PCC 7407]
gi|427984116|gb|AFY65260.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 835
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E+ + RG AR + AI +TEAI+ G + RG AR ALG+ + A+ D A
Sbjct: 590 ESALRRGIARQDLGDWMGAIEAYTEAIKQGARTGLIYNNRGVARHALGDRLGALDDFRTA 649
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS------- 528
L + A + RGI++ + +F A+ D S+ + L+ N AY GL+ +
Sbjct: 650 LTLRNDQAMLYQNRGILHAEQGEFANAIADFSSALHLEPHNAEAYLRRGLSYAKLENWTQ 709
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+I +Y A + + L + A G L QF + +A+ AL+ ++ R + A+
Sbjct: 710 AIADYTAARQHQPQRASLYFHRGLARGKLGQFSEAIADYTHALQ-------LNPRHALAH 762
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGSR 613
RGLL LG ++A+ DL++ +R
Sbjct: 763 FCRGLLRQQLGDLQRAVFDLTTAAR 787
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +G++A+AI+ F L +P EA + RG + A AI+D+T A Q
Sbjct: 662 NRGILHAEQGEFANAIADFSSALHLEPHNAEAYLRRGLSYAKLENWTQAIADYTAARQHQ 721
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG AR LG+ EAI D + AL+ P A RG++ + D AV D
Sbjct: 722 PQRASLYFHRGLARGKLGQFSEAIADYTHALQLNPRHALAHFCRGLLRQQLGDLQRAVFD 781
Query: 506 LSACVKLDKE 515
L+ +L E
Sbjct: 782 LTTAARLFAE 791
>gi|425448365|ref|ZP_18828342.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(fragment) [Microcystis aeruginosa PCC 9443]
gi|389730873|emb|CCI05002.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(fragment) [Microcystis aeruginosa PCC 9443]
Length = 419
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 18/248 (7%)
Query: 364 RNKKFCVTRISKSKSISV----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ K R+S + + + +F +G + G + AI+ DQ L+ P EA
Sbjct: 155 QGKTSTTQRLSTANNTPIVQDAEFWFEQGTQKYMNGDFIGAIASSDQALEFKPDDHEAWY 214
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A AI+ + +A++ P +AW RG A LG E I KALE +
Sbjct: 215 NRGIALGNLGRFAEAIASYDKALEIKPDLHQAWYNRGNALGNLGRFAEEIASYDKALEIK 274
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + + RG F A+ +++ + A++ G AL ++G + + +
Sbjct: 275 PDKHEAWYNRGNALDDLGRFAEAIASYDRALEIKPDKHEAWSNRGNALGNLGRFAEEIAS 334
Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ KA++ + +AW G+L +F + +A+ +KALE I +A++ RG
Sbjct: 335 YDKALEFKPDLHQAWYNRGNALGNLGRFAEAIASYDKALE-------IKPDLHQAWYNRG 387
Query: 593 LLLHGLGQ 600
+ LG+
Sbjct: 388 WAICSLGK 395
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+GT + + AI+ +A++ P EAW RG A LG EAI KALE +P
Sbjct: 182 QGTQKYMNGDFIGAIASSDQALEFKPDDHEAWYNRGIALGNLGRFAEAIASYDKALEIKP 241
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG F + +++ + A+ G AL +G + +A ++
Sbjct: 242 DLHQAWYNRGNALGNLGRFAEEIASYDKALEIKPDKHEAWYNRGNALDDLGRFAEAIASY 301
Query: 541 LKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A+++ + EAW G+L +F +++A+ +KALE +A++ RG
Sbjct: 302 DRALEIKPDKHEAWSNRGNALGNLGRFAEEIASYDKALE-------FKPDLHQAWYNRGN 354
Query: 594 LLHGLGQHKKAI 605
L LG+ +AI
Sbjct: 355 ALGNLGRFAEAI 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E W +G + G+ + AI +ALEF+P+ + + RGI F A+
Sbjct: 177 EFWFEQGTQKYMNGDFIGAIASSDQALEFKPDDHEAWYNRGIALGNLGRFAEAIASYDKA 236
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+++ + A+ G AL ++G + + ++ KA+++ + EAW + DL +
Sbjct: 237 LEIKPDLHQAWYNRGNALGNLGRFAEEIASYDKALEIKPDKHEAWYNRGNALDDLGRFAE 296
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ + L I +A+ RG L LG+ + I
Sbjct: 297 AIASYDRALEIKPDKHEAWSNRGNALGNLGRFAEEI 332
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ E+G + DF A+ ++ ++ A+ G+AL ++G + +A ++ K
Sbjct: 176 AEFWFEQGTQKYMNGDFIGAIASSDQALEFKPDDHEAWYNRGIALGNLGRFAEAIASYDK 235
Query: 543 AIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A+++ + +AW G+L +F +++A+ +KALE I +A++ RG L
Sbjct: 236 ALEIKPDLHQAWYNRGNALGNLGRFAEEIASYDKALE-------IKPDKHEAWYNRGNAL 288
Query: 596 HGLGQHKKAI 605
LG+ +AI
Sbjct: 289 DDLGRFAEAI 298
>gi|189219400|ref|YP_001940041.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189186258|gb|ACD83443.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 268
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 373 ISKSKSISVDFRLS----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
I +++I +D R S RGI + +Y AI + + +K D RG A +
Sbjct: 92 IDYNEAIKLDPRASYFNRRGILEAKLEQYDKAIKDYSESIKRDKTKAYVYNNRGWAYYKE 151
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R +AAI DF +AI+ NP A+ RG R GE EA++DLS+A++ EPN+ + ++
Sbjct: 152 RNFDAAIRDFDQAIKLNPRYALAYDNRGWVRFRKGEREEALRDLSRAIQLEPNNPEFYND 211
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG+V + F+ A+ D + L
Sbjct: 212 RGVVLTDLEKFDDALRDFEKALSL 235
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI----GRGTARAFQRELEAAISDFTE 440
L GI + Y A+ + Q + + E+L R A A+ D+ E
Sbjct: 37 LQEGINAQYKKNYEKALEYYTQAIDSGELSKESLALAYNNRADAWVATAHYYKALIDYNE 96
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P A + RRG A L + +AI+D S++++ + A + + RG +K ++F+
Sbjct: 97 AIKLDPRAS-YFNRRGILEAKLEQYDKAIKDYSESIKRDKTKAYVYNNRGWAYYKERNFD 155
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D +KL+ AY G GE ++A +AIQL+ N E +
Sbjct: 156 AAIRDFDQAIKLNPRYALAYDNRGWVRFRKGEREEALRDLSRAIQLEPNNPEFYNDRGVV 215
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKA 587
DL + AL ++ L + +++A
Sbjct: 216 LTDLEKFDDALRDFEKALSLKPDYTEA 242
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A E + +AI FDQ +K +P Y A RG R + E E A+ D + AIQ
Sbjct: 143 NRGWAYYKERNFDAAIRDFDQAIKLNPRYALAYDNRGWVRFRKGEREEALRDLSRAIQLE 202
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P+ E + RG L + +A++D KAL +P+ + L + I
Sbjct: 203 PNNPEFYNDRGVVLTDLEKFDDALRDFEKALSLKPDYTEALKNQHIA 249
>gi|432111813|gb|ELK34856.1| Tetratricopeptide repeat protein 13 [Myotis davidii]
Length = 736
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 44/234 (18%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ G Y AI F +L+E+P A+ GRG A
Sbjct: 53 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYG------------------------- 87
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF----------------- 494
K+ + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 88 -KKGLHILSPLGRISEAVNDLTKAIQLQP-SARLYRHRGTLYFISEASPFCPEALPCAMR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED + L++ A Y GL G K+A E+ +A++ +F++A+
Sbjct: 146 NTEDYATAHEDFQQSLALNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 205
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L Q Y++L N E A E Q+ L +++ + LRGL+L+ G ++A+K+
Sbjct: 206 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLQEALKNF 259
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A N YA+A F Q L + P A++ +G + L+ AI F EA++
Sbjct: 143 AMRNTEDYATAHEDFQQSLALNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFI 202
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A+K GQA LG A + KAL N L RG++ + A+++ C
Sbjct: 203 DAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLQEALKNFKRC 262
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++L+ N+ GL+ ++G++ + +A K +
Sbjct: 263 LQLEPYNEVCQYMRGLSHVAMGQFYEGIKAQTKVM 297
>gi|220906436|ref|YP_002481747.1| hypothetical protein Cyan7425_1000 [Cyanothece sp. PCC 7425]
gi|219863047|gb|ACL43386.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 219
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + +G YA+A++ + Q L+ +P + EA RGT R Q + AI+DF +AI+ +P+
Sbjct: 71 GNDHLQQGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPN 130
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG R G EAI D ++A+ P+ + RG+ D +A+ DL
Sbjct: 131 NSTAYANRGTTRTIQGNFPEAIADFTQAIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQ 190
Query: 508 ACVKLDKENKS 518
+ L ++ S
Sbjct: 191 QAISLYQKQGS 201
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +RG + +G Y AI+ FDQ ++ DP A RGT R Q AI+DFT+
Sbjct: 98 VEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPNNSTAYANRGTTRTIQGNFPEAIADFTQ 157
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
AI+ NPS + RG ARA G+ AI DL +A+
Sbjct: 158 AIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQQAISL 195
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q AA++D+T+A+Q NP+ EA+ RG R G+ AI D +A+ +PN++
Sbjct: 77 QGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPNNSTAYA 136
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-------LSSIGEYKKA---- 536
RG +F A+ D + ++L+ + + Y G+A S+IG+ ++A
Sbjct: 137 NRGTTRTIQGNFPEAIADFTQAIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQQAISLY 196
Query: 537 -EEAHLKAIQLDRNFL 551
++ L+A Q RN L
Sbjct: 197 QKQGSLQASQEARNLL 212
>gi|75907774|ref|YP_322070.1| TPR repeat-containing serine/threonine protein kinase [Anabaena
variabilis ATCC 29413]
gi|75701499|gb|ABA21175.1| serine/threonine protein kinase with TPR repeats [Anabaena
variabilis ATCC 29413]
Length = 707
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S + + + P Y A G+G ++ + A++ + +AIQ P EAW R
Sbjct: 344 RYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + +L EAI KAL+ N ++ + RG K ++ A++ ++ +
Sbjct: 404 GFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKSD 463
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ GLAL S+ EY +A A+ KAI++ ++ AW +L +L E A +
Sbjct: 464 AYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + ++ A+ +G +L L ++ +AI+ +
Sbjct: 524 KAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFN 557
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I D+ + RG + + +YA AI+ FD+ L+ + YPE RG A
Sbjct: 382 ALTAYDKAIQIQPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAF 441
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ ++ + AI + +AI+ A E++ +G A +L E EAI +KA+E + +
Sbjct: 442 SNLKQYDRAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSD---- 497
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ER N LG +L ++ Y+ A +A+ KA+Q
Sbjct: 498 -YERAWYN-----------------------------LGNSLVNLNRYEDAFKAYDKAVQ 527
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ AW L +A+E QV+ + +A++ +G H ++ +AI
Sbjct: 528 YKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGKGWSQHQNQRYAEAI 587
Query: 606 KDLSSGSRTMMP--HLIW 621
+ + T+ P + +W
Sbjct: 588 ESYKKAA-TIKPSNYQVW 604
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEG 395
SD+ ES LKE NEA + +K+ I D+ + G + VN
Sbjct: 462 SDAYESFYNKGLALQSLKEY-NEA-------INAYNKAIEIKSDYERAWYNLGNSLVNLN 513
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A +D+ ++ Y A + +G R AI F + I+ NP++ +AW +
Sbjct: 514 RYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGK 573
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++ EAI+ KA +P++ + + G + + + A+ + V+ +
Sbjct: 574 GWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAVRYQPK 633
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++ G AL S+ +Y+ A ++ +AI+ ++ +A
Sbjct: 634 HIESWYSRGNALFSLKQYQDAIASYEQAIKHKPDYSQA 671
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 74/152 (48%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A+ KA++ P+ A + +G F+ K + A+ +++
Sbjct: 334 KQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQ 393
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G +L S+ Y +A + KA+QL+ N+ E W + + +L ++A++
Sbjct: 394 PDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKS 453
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + ++++ +GL L L ++ +AI
Sbjct: 454 YDKAIEFKSDAYESFYNKGLALQSLKEYNEAI 485
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 372 RISKSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
R KS +++F+ ++G+A + +Y AI+ +++ ++ Y A G +
Sbjct: 449 RAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNS 508
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
E A + +A+Q AW +G L EAI+ ++ ++F PNS
Sbjct: 509 LVNLNRYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQ 568
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +G + + + A+E + N + LG + + +Y++A ++ KA+
Sbjct: 569 AWYGKGWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAV 628
Query: 545 QLDRNFLEAW---GH----LTQFYQDLANSEKALE 572
+ +E+W G+ L Q+ +A+ E+A++
Sbjct: 629 RYQPKHIESWYSRGNALFSLKQYQDAIASYEQAIK 663
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F+ + + A+ V + + A+ G L + +Y+ A A+
Sbjct: 327 NNATELAKQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAY 386
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +++EAW Q L +A+ + L +++ + + ++ RG L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446
Query: 601 HKKAIK 606
+ +AIK
Sbjct: 447 YDRAIK 452
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 21/193 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAK--------LCSLRNWSKAIRILD-SLL 63
L K T E+ S A+ R + A L L+ + A+ D ++
Sbjct: 332 LAKQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQ 391
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Q ++ R F L+ + I DKALQL+ + + +G AFS L + + A+
Sbjct: 392 IQPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAI 451
Query: 124 SVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD-----VSNSMSS 171
++K YE ++ L+ E E + A + + +Y+ + NS+ +
Sbjct: 452 KSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVN 511
Query: 172 LTVSESGLNANDK 184
L E A DK
Sbjct: 512 LNRYEDAFKAYDK 524
>gi|298247115|ref|ZP_06970920.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297549774|gb|EFH83640.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 770
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G A++ + ++ +DP Y E + RG E A++D+ ++ +
Sbjct: 506 NRGQVYAGIGALEEALADYTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVFYS 565
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA R + G EA+ D S LE +P D L R + ++ ++ A+++D
Sbjct: 566 PPYAEAHFNRANVHSLFGHDEEALADYSYVLEIDPTYLDALINRASIFYEQGNYTASLQD 625
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ D EN + LGL L + + +KA++A A+Q D + AW + +
Sbjct: 626 VERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSAALQQDPLLVAAWTNRAILAFEEN 685
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
E A++ L Q L +++ + Y+ RG+ + ++AI D +
Sbjct: 686 RIEAAIKDLSQALALEENPTVLYN-RGIAYQAQNRWQEAINDFTQA 730
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D ++R +G Y +++ ++ L++DP + G Q + E A F+
Sbjct: 603 LDALINRASIFYEQGNYTASLQDVERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSA 662
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+Q +P AW R AI+DLS+AL E N +L+ RGI +
Sbjct: 663 ALQQDPLLVAAWTNRAILAFEENRIEAAIKDLSQALALEENPT-VLYNRGIAYQAQNRWQ 721
Query: 501 AAVEDLSACVKLDKENKSAYTY 522
A+ D + + L E+ Y
Sbjct: 722 EAINDFTQALALSNEDAQDILY 743
>gi|425437613|ref|ZP_18818028.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9432]
gi|389677387|emb|CCH93669.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9432]
Length = 317
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q ++ + A R + ++ A
Sbjct: 42 AQSVHLSYWLRSGIEQLEAGNYQQALQDFNQSIERENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQSA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L +++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYNRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 1078
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
ETS K++ V ++ SVD ++GI+ N G Y ++ FD+ L DP +
Sbjct: 621 ETSGSVKKSINNDVPQLDIFTVDSVDAWSAKGISYQNIGNYNESLVCFDKALMLDPTSVK 680
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L +G+A AI + AI +P AW G + G+S A L
Sbjct: 681 VLCDKGSALVEAGMDLWAIECYESAIAFDPGYSPAWYSLGVVSLSTGDSDRAQICFDNVL 740
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EPN+ + ++G V F ++ A++ + + +D EN A++ G A ++ +Y A
Sbjct: 741 ALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDA 800
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ +A++LDR ++ + Y+ L ++A+ +++ A + +GL L
Sbjct: 801 ASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIYHKGLALD 860
Query: 597 GLGQHKKAI 605
+G++ A+
Sbjct: 861 RMGRYDDAV 869
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ ++ G A FD +L +P A++ +G + A+ I +
Sbjct: 718 SLGVVSLSTGDSDRAQICFDNVLALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISID 777
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A AL + +A +ALE + + DIL+++ + K F+ A+
Sbjct: 778 PENSQAFSDRGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGS 837
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++K A + GLAL +G Y A + + ++LD + G +
Sbjct: 838 YDKIIAEQPDSKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRG 897
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++AL QVL ID A + +G + + + +K +I
Sbjct: 898 DYQQALAGFDQVLAIDPTSVSAMYHKGTISYLVSSYKGSI 937
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N C + + S +G A N GKY AIS +D++ + +P A++ A
Sbjct: 388 NAMECYNKSPTFSTESAHIWYDKGTAFYNLGKYEDAISSYDRVTELEP--NSAIVWYNRA 445
Query: 425 RAFQ--RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+AF ++ + A+ +++A+ + S W RG LG +AI+ KAL+ +P
Sbjct: 446 KAFDMLQKYDGAVDSYSKALNAE-SCARVWFERGMDLDKLGLFADAIKSYDKALKEDPGF 504
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ L+ + K + + A+ + ++L E+ + G+ L +G+Y++A A+ +
Sbjct: 505 SAALYAKASNLEKVERYTEALTAYNKLLELHSESADIWYRKGMVLDKLGKYEEAIVAYEQ 564
Query: 543 AIQLDRNFLEA 553
+ LD + EA
Sbjct: 565 TLALDPGYQEA 575
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY A S +DQ L+ D + L + A + + AI + + I P
Sbjct: 787 RGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQP 846
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A +G A +G +A+ + LE +P+ ++ + + D+ A+
Sbjct: 847 DSKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRGDYQQALAGF 906
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D + SA + G + YK + + K ++LD + AW + Y +
Sbjct: 907 DQVLAIDPTSVSAMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNKGFIYNLIGQ 966
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E ++ C L ID + + L+ +G+ +A
Sbjct: 967 VETSISCYDSALAIDPSSRSVLYNKRFALYSIGKSSEA 1004
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ A+ +D IL Y ++ G + +I+ F A+ P + W
Sbjct: 180 GRHEEAMVCYDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFA 239
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R A A+GE A+ D + L+ EP +A+ L+ + D +++E + + D
Sbjct: 240 RAAAYEAIGEYENALADYNNILKLEPLNAEALYGKARAATNLGDHASSIEAYNLLLSEDP 299
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +A+ + S+G+Y A + + + LD AW + L +A+EC
Sbjct: 300 YNINAWLLQAQSYDSLGQYTDAINCYDQLLVLDPQNATAWNKKGRTLDSLGRYSEAIECY 359
Query: 575 QQVL 578
+ L
Sbjct: 360 DRAL 363
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R A G+Y +A++ ++ ILK +P+ EAL G+ A + ++I + +
Sbjct: 238 FARAAAYEAIGEYENALADYNNILKLEPLNAEALYGKARAATNLGDHASSIEAYNLLLSE 297
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P AW + Q+ +LG+ +AI + L +P +A +++G ++ A+E
Sbjct: 298 DPYNINAWLLQAQSYDSLGQYTDAINCYDQLLVLDPQNATAWNKKGRTLDSLGRYSEAIE 357
Query: 505 -------------------DLSACVKLDKEN-------------KSAYTYL--GLALSSI 530
D+S+ + +D+ N +SA+ + G A ++
Sbjct: 358 CYDRALQLNSDGFSGVSITDMSSYLFIDEVNAMECYNKSPTFSTESAHIWYDKGTAFYNL 417
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+Y+ A ++ + +L+ N W + + + L + A++ + L + ++ +
Sbjct: 418 GKYEDAISSYDRVTELEPNSAIVWYNRAKAFDMLQKYDGAVDSYSKALNAES-CARVWFE 476
Query: 591 RGLLLHGLGQHKKAIK 606
RG+ L LG AIK
Sbjct: 477 RGMDLDKLGLFADAIK 492
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 26/237 (10%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ G +A AI +D+ LKEDP + AL + + A++ + + ++
Sbjct: 475 FERGMDLDKLGLFADAIKSYDKALKEDPGFSAALYAKASNLEKVERYTEALTAYNKLLEL 534
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD----ILHERGIVNFKFKDFN 500
+ + + W R+G LG+ EAI + L +P + I+ + ++N
Sbjct: 535 HSESADIWYRKGMVLDKLGKYEEAIVAYEQTLALDPGYQEANLRIMIDTNLIN------- 587
Query: 501 AAVEDLSACVKLDKENKSAY--TYLGLALSSI------GEYKKA---EEAHLKAIQLDRN 549
+D + +K+ + +K+ + G+ + + G KK+ + L +D
Sbjct: 588 --ADDTAESMKMVQTDKATMFQIFKGIVPTPLSNNETSGSVKKSINNDVPQLDIFTVDS- 644
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++AW YQ++ N ++L C + L +D K +G L G AI+
Sbjct: 645 -VDAWSAKGISYQNIGNYNESLVCFDKALMLDPTSVKVLCDKGSALVEAGMDLWAIE 700
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 102/266 (38%), Gaps = 36/266 (13%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE-DPMYPEALIGRGTARAFQRELEAA 434
+KS S +F +G+ N G+Y +++I++ LK+ D Y + +
Sbjct: 93 NKSNSSEFLYKKGVMLENLGRYQESLNIYEASLKKFDAQYYNQSSDQSNVSSSNSSNATF 152
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++D + + + +G++ LG EA+ L+ A+ +++ G
Sbjct: 153 LTDLN-GMAFDSEYIQLVYHKGRSLDGLGRHEEAMVCYDHILDLFSTYANSMYDTGYSYL 211
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE----------------- 537
+ +N ++ + + ++ + A +IGEY+ A
Sbjct: 212 QVGRYNDSIASFDVALTMLPDDPKMWFARAAAYEAIGEYENALADYNNILKLEPLNAEAL 271
Query: 538 -----------------EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
EA+ + D + AW Q Y L A+ C Q+L +
Sbjct: 272 YGKARAATNLGDHASSIEAYNLLLSEDPYNINAWLLQAQSYDSLGQYTDAINCYDQLLVL 331
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIK 606
D + + A++ +G L LG++ +AI+
Sbjct: 332 DPQNATAWNKKGRTLDSLGRYSEAIE 357
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-LG 524
EA++ +ALE +P S +IL + + D +A+ A L+K N S + Y G
Sbjct: 48 TEALEFFEQALEIDPQSIEILENKAETQYLMGDPQSALNSYDAI--LNKSNSSEFLYKKG 105
Query: 525 LALSSIGEYKKA---EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ L ++G Y+++ EA LK + D + + +++ L L + +
Sbjct: 106 VMLENLGRYQESLNIYEASLK--KFDAQYYNQSSDQSNVSSSNSSNATFLTDLNGMAFDS 163
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAI 605
+ YH +G L GLG+H++A+
Sbjct: 164 EYIQLVYH-KGRSLDGLGRHEEAM 186
>gi|425468819|ref|ZP_18847804.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
gi|389884522|emb|CCI35187.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
Length = 707
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + + LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG++ EA++ + L P ++ + + + + ++AA + L + K
Sbjct: 407 RGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQK 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+A++ +G++L LG++ +A++ + ++
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATK 565
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 559 AFNQATKANSNYYQAWLNQGALLHQLERFQEAITSYEKARR 599
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 113/285 (39%), Gaps = 40/285 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQL 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + + + EKA + QQ + K + +
Sbjct: 585 ERFQEAITSYEKARRISSQKAEVFIGIGNACYRLGDNSQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLS------SGSRTMMPHLIWNLTRWRNL 629
G LGQ+++AI+ S R + TRW+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQEL 689
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
++ ++GQ L +A+ KAL+ P+ + L + K ++ A+ +
Sbjct: 334 SYYQQGQTFYQLKRYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAI 393
Query: 511 KLDKENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+++ ++ A+ G AL +G+ ++A E+ + + L+ +AW Y +L
Sbjct: 394 QINPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSA 453
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A + L+++L K +K ++ +G L L ++ A+K
Sbjct: 454 AQKALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVK 490
>gi|172035504|ref|YP_001802005.1| hypothetical protein cce_0588 [Cyanothece sp. ATCC 51142]
gi|171696958|gb|ACB49939.1| unknown [Cyanothece sp. ATCC 51142]
Length = 287
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ +++ G Y +AI F + +K D +A RG + + E AI+D+ +AI+ N
Sbjct: 67 NKGVDEIDAGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELN 126
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A L ++I+D S+A+E E N AD G K AA+
Sbjct: 127 AEFAYAYGNRCYAYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILA 186
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ + +++ N AY LA + +G+ +A E + KAIQ + NF +A+ + +T+F
Sbjct: 187 YNQAIAINENNPKAYYNRALAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRF--K 244
Query: 564 LANSEKALECLQQ 576
L EKA+ L++
Sbjct: 245 LKEIEKAIADLEK 257
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI FTE+I+ + + +A+ RG + L + EAI D +KA+E A R
Sbjct: 79 QAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYGNRCY 138
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ K++ +++D S ++L+ Y YLG A + ++ A A+ +AI ++ N
Sbjct: 139 AYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYNQAIAINENNP 198
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ + Y L S +A+E + + + F+ AYH RG+ L + +KAI DL
Sbjct: 199 KAYYNRALAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKEIEKAIADLEKA 258
Query: 612 SR 613
+
Sbjct: 259 AE 260
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 355 LKETSNEAKRNKKF----------CVTRISKSKSISVDFRLSRG---IAQVNEGKYASAI 401
L ET +A N+ + + +K+ ++ +F + G A Y +I
Sbjct: 91 LDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYGNRCYAYYQLKNYEQSI 150
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
Q ++ + Y + I G A+ + +AAI + +AI N + +A+ R A
Sbjct: 151 KDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYNQAIAINENNPKAYYNRALAYNR 210
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
LG+S++A++D +KA++F PN AD H RG+ FK K+ A+ DL +L
Sbjct: 211 LGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKEIEKAIADLEKAAEL 261
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G G AI+ +++++ + AD + RG + F A+ D + ++
Sbjct: 65 WYNKGVDEIDAGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIE 124
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ E AY A + Y+++ + +AI+L+ N+ + + +L DL + A+
Sbjct: 125 LNAEFAYAYGNRCYAYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAI 184
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Q + I++ KAY+ R L + LGQ +A++D +
Sbjct: 185 LAYNQAIAINENNPKAYYNRALAYNRLGQSLQAVEDYTKA 224
>gi|445062771|ref|ZP_21375099.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
gi|444505847|gb|ELV06281.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
Length = 430
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E + N + +ERG++
Sbjct: 138 AIEDFDKAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIY 197
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
++ D+++A++D ++LD EN A +L L+ ++ EY+
Sbjct: 198 YRNSDYDSAIKDFKKVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEPNTPDA 257
Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+A E K I +D ++A+ ++ Y L + +KA+EC +V+
Sbjct: 258 FYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIE 317
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
D AY+ RGL GL + +A +D
Sbjct: 318 TDNYSIDAYYNRGLSKVGLKLYNEAYED 345
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y AI+ + ++++ D +Y + R A + E A+ D+ +AI+ NP
Sbjct: 24 GLLEYKLGNYKDAINYYTKMIEMNDDIYY-SYYNRALAEESLQLYEEALEDYNKAIELNP 82
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 83 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAYLYNNRALLKGRMHLYKEAIEDF 142
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L + Y Y GL S + E +A + KAI+LD N++ A+ Y ++
Sbjct: 143 DKAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIYYRNSD 202
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIK 606
+ A++ ++V+ +D A YHL L L +++ A+K
Sbjct: 203 YDSAIKDFKKVIELDNENVYANYHL-ALSYDALEEYETALK 242
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F ++++ D A + E E A+ +T I+ P
Sbjct: 193 RGLIYYRNSDYDSAIKDFKKVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEP 252
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A + EAI+D K ++ + D GI KD+ AVE
Sbjct: 253 NTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECY 312
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ ++ D + AY GL+ + Y +A E +++A++++ + A+
Sbjct: 313 TKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYN 361
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
L+ +D L+E K TR+ + + + D +R +A++ Y AI F ++
Sbjct: 227 LALSYDALEEYETALK-----YYTRVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKV 281
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ D +A G ++ + A+ +T+ I+++ + +A+ RG ++ L E
Sbjct: 282 IDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIETDNYSIDAYYNRGLSKVGLKLYNE 341
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKF 496
A +D +ALE P A+ + G K+
Sbjct: 342 AYEDYIRALEINPKYANAYNGIGFSKTKY 370
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 469 IQDLSKALEF--EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+ D KALE+ E N I ++ G++ +K ++ A+ + ++++ + +Y LA
Sbjct: 1 MADYKKALEYADEDNIISIYNDMGLLEYKLGNYKDAINYYTKMIEMNDDIYYSYYNRALA 60
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S+ Y++A E + KAI+L+ ++ + ++ ++ALE + + ++K +
Sbjct: 61 EESLQLYEEALEDYNKAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAY 120
Query: 587 AYHLRGLLLHGLGQHKKAIKDL 608
Y+ R LL + +K+AI+D
Sbjct: 121 LYNNRALLKGRMHLYKEAIEDF 142
>gi|42525946|ref|NP_971044.1| TPR [Treponema denticola ATCC 35405]
gi|449112922|ref|ZP_21749468.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
33521]
gi|449114862|ref|ZP_21751330.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
35404]
gi|41815996|gb|AAS10925.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448954305|gb|EMB35087.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
35404]
gi|448955039|gb|EMB35807.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
33521]
Length = 338
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF I+ NP +A+ +G
Sbjct: 59 AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + ++ A ED++ +KL+ ++
Sbjct: 119 NDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYEQINEYEKAFEDINTAIKLNPKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A AI+LD N + + L Y ++ + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ + Y +RG L GQ+K+AI+D ++G R M PH
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIR-MYPH 277
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N S E + G + AI +KA+E +P + RG + + + A
Sbjct: 34 KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++L+ + AY + GL + G Y KA E AI L+ E + ++ Y+
Sbjct: 94 LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYE 153
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ EKA E + + ++ + +K Y+LRG L + AI D
Sbjct: 154 QINEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDF 199
>gi|428772587|ref|YP_007164375.1| hypothetical protein Cyast_0753 [Cyanobacterium stanieri PCC 7202]
gi|428686866|gb|AFZ46726.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 246
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G+Y AI+ ++Q L+ DP Y A I RG + Q + + AI+DFT AI +
Sbjct: 93 NRGLSFERLGQYQRAIADYNQTLQLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLD 152
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R + LGE AI D ++ L P+ D ++ RG+ +++ D +A +D
Sbjct: 153 PNHYRAYYNRANSYFYLGEYQRAIVDYNQTLTLNPHYYDAIYNRGLTHYQMGDLESAQKD 212
Query: 506 L--SACVKLDKENKSAY 520
L +A L++ ++++Y
Sbjct: 213 LFQAARAYLNQNDQNSY 229
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 41/192 (21%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAI 442
+G++ G Y SAI +F +I+ P PE RG + F+R + + AI+D+ + +
Sbjct: 58 FEQGVSLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLS--FERLGQYQRAIADYNQTL 115
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P A+ RG + + AI D ++A+ +PN H R N
Sbjct: 116 QLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLDPN-----HYRAYYN--------- 161
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-WGHLTQFY 561
++Y YLG EY++A + + + L+ ++ +A + Y
Sbjct: 162 -------------RANSYFYLG-------EYQRAIVDYNQTLTLNPHYYDAIYNRGLTHY 201
Query: 562 Q--DLANSEKAL 571
Q DL +++K L
Sbjct: 202 QMGDLESAQKDL 213
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 461 ALGES---VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+LGES AI+ S+ + P + + RG+ + + A+ D + ++LD E
Sbjct: 63 SLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYNQTLQLDPEYI 122
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY G S ++++A +AI LD N A+ + Y L ++A+ Q
Sbjct: 123 PAYINRGNLYSLQDDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEYQRAIVDYNQT 182
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
L ++ + A + RGL + +G + A KDL +R +
Sbjct: 183 LTLNPHYYDAIYNRGLTHYQMGDLESAQKDLFQAARAYL 221
>gi|347756696|ref|YP_004864259.1| ankyrin repeat-containing protein [Candidatus Chloracidobacterium
thermophilum B]
gi|347589213|gb|AEP13742.1| Ankyrin repeat protein [Candidatus Chloracidobacterium thermophilum
B]
Length = 609
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y AI FD +K P + RG A +R+ + A+SD+ +A+ +P
Sbjct: 142 RGLCYFGLEQYDEAIRDFDAAIKASPREALWFVYRGRAYEAKRDSKRALSDYEQALLLDP 201
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG A G+ AI D L EPN+ D+L RG + + K F+ AV+D
Sbjct: 202 NNVRARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIELKRFDQAVKDF 261
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V+LD N Y G A + +Y A+ +A++LD N + + + ++++
Sbjct: 262 DELVRLDPNNARGYVGRGFARYQVKDYALAKADFDRALELDPNTGKVFCYRAMTHREMGQ 321
Query: 567 SEKALECLQQVLYID 581
E A +Q +D
Sbjct: 322 LEAADADFRQCFTLD 336
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSI---SVD 382
E Y ++ I D ++ R L W + + + EAKR+ K ++ ++ + +V
Sbjct: 150 EQYDEA-IRDFDAAIKASPREAL---WFVYRGRAYEAKRDSKRALSDYEQALLLDPNNVR 205
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
R +RG+A +G++ AI+ FD +L+ +P + L RG A + + A+ DF E +
Sbjct: 206 ARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIELKRFDQAVKDFDELV 265
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P+ + RG AR + + A D +ALE +PN+ + R + + + AA
Sbjct: 266 RLDPNNARGYVGRGFARYQVKDYALAKADFDRALELDPNTGKVFCYRAMTHREMGQLEAA 325
Query: 503 VEDLSACVKLDKENKSAY 520
D C LD K+ Y
Sbjct: 326 DADFRQCFTLDVGQKTVY 343
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++ GKY AI ++ Q ++ +PEA RG A E A DF AIQ P+ +A
Sbjct: 45 LSAGKYEEAIQLYTQAIERKADFPEAYNWRGFAYRATGRREEARRDFDRAIQLRPNYAKA 104
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
++ R LG+ +A++D ++ + +P S + RG+ F + ++ A+ D A +K
Sbjct: 105 YELRALTLYELGQYADAVKDYTEVFKLDPKSQSNIGYRGLCYFGLEQYDEAIRDFDAAIK 164
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ Y G A Y+ +S++AL
Sbjct: 165 ASPREALWFVYRGRA----------------------------------YEAKRDSKRAL 190
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+Q L +D +A RG+ L+ GQ ++AI D RT
Sbjct: 191 SDYEQALLLDPNNVRARTARGVALYVQGQFERAIADFDVVLRT 233
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
S G+Y++A + + +AI+ +F EA+ Y+ E+A + + + ++KAY
Sbjct: 46 SAGKYEEAIQLYTQAIERKADFPEAYNWRGFAYRATGRREEARRDFDRAIQLRPNYAKAY 105
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCF 631
LR L L+ LGQ+ A+KD + + + P N+ +R LC+
Sbjct: 106 ELRALTLYELGQYADAVKDYTEVFK-LDPKSQSNIG-YRGLCY 146
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ + ++ + AY + G A + G ++A +AIQL N+ +A+
Sbjct: 50 YEEAIQLYTQAIERKADFPEAYNWRGFAYRATGRREEARRDFDRAIQLRPNYAKAYELRA 109
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+L A++ +V +D + RGL GL Q+ +AI+D + +
Sbjct: 110 LTLYELGQYADAVKDYTEVFKLDPKSQSNIGYRGLCYFGLEQYDEAIRDFDAAIKASPRE 169
Query: 619 LIWNLTRWR 627
+W + R R
Sbjct: 170 ALWFVYRGR 178
>gi|163851391|ref|YP_001639434.1| hypothetical protein Mext_1964 [Methylobacterium extorquens PA1]
gi|254561150|ref|YP_003068245.1| hypothetical protein METDI2727 [Methylobacterium extorquens DM4]
gi|163662996|gb|ABY30363.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
PA1]
gi|254268428|emb|CAX24385.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 286
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ AI+ F + ++ DP A R A +AA+ DF++AI ++
Sbjct: 73 TRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIAND 132
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R A G+ A+ DL+ A+ P SA+ H RG+V K A+ D
Sbjct: 133 PNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGD 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A + + + Y G +L S+G+Y KA E A+ ++ +W + Y+
Sbjct: 193 FAAAIDRNPFVAAPYAARGQSLISLGQYDKAIEDFNAALNVNSKDAGSWAYRGLAYEKTN 252
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A E QQ +D + A G + GL
Sbjct: 253 RRKEANESYQQAARLDPNNAVAKQGVGRMQGGL 285
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ ++ I NPS A+ RG A A G+ EAI D SKA++ +PNSA + R +
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +AA++D S + D +AY + G+ A AI+L EA+
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAY 173
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
Q ++ +A+ + + + Y RG L LGQ+ KAI+D ++
Sbjct: 174 HARGLVRQKQNHNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLGQYDKAIEDFNA 229
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + LS + + + AY G A + G++ +A KAIQLD N A+ +
Sbjct: 51 NVNIASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++ A++ + + D FS AY R L G A+ DL+
Sbjct: 111 AYRQTGRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLN 160
>gi|189183309|ref|YP_001937094.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
Ikeda]
gi|189180080|dbj|BAG39860.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
Ikeda]
Length = 379
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 34/252 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE----- 450
KY AI FD +K D Y A G+G A +L A+ ++ AI+ NP E
Sbjct: 55 KYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIKYNPHFAEAYNNK 114
Query: 451 -----------------------------AWKRRGQARAALGESVEAIQDLSKALEFEPN 481
A+ +G + A LG+ +A+++ A+++EPN
Sbjct: 115 AVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIKYEPN 174
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + + +GI A+E+ ++ AY GL L+ +G+ + A E
Sbjct: 175 NPEAYYNKGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFD 234
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
AI+ D N L A+ + + L +A+E + ID + +Y+++G++ LG+H
Sbjct: 235 LAIKYDPNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKH 294
Query: 602 KKAIKDLSSGSR 613
+ AIK+ ++
Sbjct: 295 QDAIKNYDIAAK 306
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI + D ++ P + A +G + A + E A+ ++ AI+ P+ EA+
Sbjct: 122 GKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIKYEPNNPEAYYN 181
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EAI++ A+ + PN ++ H +G+ +A+E +K D
Sbjct: 182 KGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFDLAIKYDP 241
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY L+ + Y +A E+ AI++D N +++ ++ L + A++
Sbjct: 242 NDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKHQDAIKNY 301
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLI 620
+ F+K Y +G+ L LGQ+ KA ++ + MP+ I
Sbjct: 302 DIAAKYNPNFAKNYLEKGISLVSLGQYSKAKENFKLAIK-YMPNFI 346
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G AI +D ++ P Y EA +G A +L++AI F AI+ +
Sbjct: 181 NKGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFDLAIKYD 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ + L EA++ + A++ +PN AD + +G++ K A+++
Sbjct: 241 PNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKHQDAIKN 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
K + Y G++L S+G+Y KA+E AI+ NF+ + + +L
Sbjct: 301 YDIAAKYNPNFAKNYLEKGISLVSLGQYSKAKENFKLAIKYMPNFIAEYEATIKRLTELE 360
Query: 566 NSEKALECLQQVLYIDKRFS 585
N A E +Q L I K++S
Sbjct: 361 NFTIAKE-FEQKLQILKKYS 379
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K K + A+E+ +K D SAY G+AL +G+ +A E + AI+ + +F EA+
Sbjct: 52 KLKKYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIKYNPHFAEAY 111
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGS 612
+ Y+ +++A+ + F AY+ +G L LGQ++ A++ D++
Sbjct: 112 NNKAVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIKY 171
Query: 613 RTMMPHLIWN 622
P +N
Sbjct: 172 EPNNPEAYYN 181
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARI----ELAKLC-SLRNWSKAIRILDSLLAQS 66
+L K + I D ++ DS ASA + +L KL ++ N+ AI+ + A++
Sbjct: 52 KLKKYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIK-YNPHFAEA 110
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y + +K I CD A+Q P + AY KG + + LG+ E+A+ +
Sbjct: 111 YN-----NKAVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENY 165
Query: 127 E 127
+
Sbjct: 166 D 166
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L AI D LA Y+ D+ CN+++ + L+ + + C+ A+++DP
Sbjct: 220 LAILGQLQSAIEHFD--LAIKYDPNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNC 277
Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
+Y +KG F LG+ ++A+ ++
Sbjct: 278 ADSYYIKGMIFEKLGKHQDAIKNYD 302
>gi|158334579|ref|YP_001515751.1| hypothetical protein AM1_1406 [Acaryochloris marina MBIC11017]
gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 783
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 4/233 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++R + G A+ FD+ + +P A RG + EAAI DF+EA
Sbjct: 31 DALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSEA 90
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P EA+ +RG + GE AIQD S+A+ P ++R + D
Sbjct: 91 IELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHPG 150
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D S + ++ +AY G+ LS GE +KA E AI+ + +A+ H
Sbjct: 151 ALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCL 210
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
+ +EKA + + L D AY + LG K+ D+SS S T
Sbjct: 211 AQMGEAEKASKDFSEALLHDPNHQAAY----TRAYALGMLKETPVDVSSPSST 259
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ALI R RA +L+ A+ DF EAI NP+ A+ RG +LG+ AI D S+
Sbjct: 30 PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E P+ + +RG + +F A++D S ++++ AY + + +G++
Sbjct: 90 AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A + I A+ F EKA+E + + R + AY RG
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209
Query: 595 LHGLGQHKKAIKDLS 609
L +G+ +KA KD S
Sbjct: 210 LAQMGEAEKASKDFS 224
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A++ F Q++ P A RG + ELE AI DFT AI+ NP +A+
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +GE+ +A +D S+AL +PN + R K+ V S+ D
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKETPVDVSSPSSTAT-DY 263
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +++ + + +E H + L+ +E + + + A+
Sbjct: 264 PLSLLEESVPVSVEPVEDSDGEQEPHPATVPLEPTSMEGFFERANNRIQRGDLDGAISDY 323
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+++ D S+AY+ RG L LG+ + A++DL+
Sbjct: 324 SKIIDTDPENSQAYYQRGQSLGALGESQAAMEDLN 358
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 36/255 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI G+ AI F ++ +P +A RG A E E A DF+EA+ +P
Sbjct: 172 RGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231
Query: 447 SAGEAWKRRGQARAALGE--------------------------SVEAIQDL-------S 473
+ A+ R A L E SVE ++D
Sbjct: 232 NHQAAYTR-AYALGMLKETPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDGEQEPHP 290
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ EP S + ER + D + A+ D S + D EN AY G +L ++GE
Sbjct: 291 ATVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDTDPENSQAYYQRGQSLGALGES 350
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A E +AI R + + G + F +L+ + + L+ + L F+K + L G
Sbjct: 351 QAAMEDLNQAIHWAR--VHSLGLMRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPGT 408
Query: 594 LLHGLGQHKKAIKDL 608
+ Q + D+
Sbjct: 409 AADQMQQADPSADDV 423
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + ++++P+ +A RG +RA +L+ AI D++ I+ +P EA+ +R +
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570
Query: 460 AALGESVEAIQDLSKALEFEP 480
+ALG+ A DL+ + P
Sbjct: 571 SALGDETAAQADLNHVIRQSP 591
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI+ T AI+ NP +A+ RGQ+RA G+ AI+D S+ + +P++ + +R
Sbjct: 508 LERAIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRA 567
Query: 491 IVNFKFKDFNAAVEDLSACVK 511
D AA DL+ ++
Sbjct: 568 RCLSALGDETAAQADLNHVIR 588
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI ++A+E P AD RG D A+ED S ++LD N+ AY L
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570
Query: 528 SSIGEYKKAE 537
S++G+ A+
Sbjct: 571 SALGDETAAQ 580
>gi|445062842|ref|ZP_21375152.1| hypothetical protein H263_05452, partial [Brachyspira hampsonii
30599]
gi|444505776|gb|ELV06228.1| hypothetical protein H263_05452, partial [Brachyspira hampsonii
30599]
Length = 184
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 76/148 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ G Y AI+ ++ L+ Y +A RGTA + AI DF +AI +P
Sbjct: 32 GACKIGLGLYNEAIADINKALEIYDEYTDAYNNRGTAEYNLGLYKEAIKDFNKAIALSPQ 91
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A++ALG +A++D + A+ EP D + R I N AV+D
Sbjct: 92 YFYAYNNRGNAKSALGLYEDALEDFTNAINIEPQYIDAYYNRAIAKNNIGLHNEAVKDYD 151
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKK 535
++LD N +AY GL+ S+G+Y+K
Sbjct: 152 VVIELDNNNINAYYNRGLSYYSLGDYEK 179
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 432 EAAISDFTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AIS + + I+ SN ++ A+ G + LG EAI D++KALE D + RG
Sbjct: 7 EEAISYYNKVIELSNSNSSYAYNNIGACKIGLGLYNEAIADINKALEIYDEYTDAYNNRG 66
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A++D + + L + AY G A S++G Y+ A E AI ++ +
Sbjct: 67 TAEYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLYEDALEDFTNAINIEPQY 126
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A+ + ++ +A++ V+ +D AY+ RGL + LG ++K K L
Sbjct: 127 IDAYYNRAIAKNNIGLHNEAVKDYDVVIELDNNNINAYYNRGLSYYSLGDYEKDFKRL 184
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G Y AI F++ + P Y A RG A++ E A+ DFT AI
Sbjct: 64 NRGTAEYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLYEDALEDFTNAINIE 123
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P +A+ R A+ +G EA++D +E + N+ + + RG+ + D+
Sbjct: 124 PQYIDAYYNRAIAKNNIGLHNEAVKDYDVVIELDNNNINAYYNRGLSYYSLGDY 177
>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1345
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++G+Y A++ F+Q + DP P G+G Q++ +AAI+ T+AI+ P
Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQAAIAAHTQAIELEPD 820
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + R + AI DL+KA++ P + RG AA+ D S
Sbjct: 821 SANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYFNNRGDAYAALNQPEAALADYS 880
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---------DRNF----LEAW 554
+ +DK N AY LG +Y++A +AI++ D+ + A
Sbjct: 881 QAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVADFPQQLETDKKYKGLAYSAR 940
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G L Y DL E+A+ Q + + + + Y R L L ++++AI D +
Sbjct: 941 GFL---YSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYT 992
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA- 441
F ++RG + +Y ++ +Q ++ DP A RG +F + + AI+D +A
Sbjct: 688 FYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747
Query: 442 ------IQSNPSAGEAWKRRGQARAALGESVE---------------------------A 468
I + G + +G+ + AL + + A
Sbjct: 748 ALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQAA 807
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I ++A+E EP+SA+ R V + + A+ DL+ ++L + + G A +
Sbjct: 808 IAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYFNNRGDAYA 867
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-------DLANSEKALEC--LQQVLY 579
++ + + A + +AI +D+N A+ L YQ +A ++A+E Q L
Sbjct: 868 ALNQPEAALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVADFPQQLE 927
Query: 580 IDKRFSK-AYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNA 633
DK++ AY RG L LG+ ++AI D S + P + + L R R L + A
Sbjct: 928 TDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIE-LSPKVTY-LYRARALNYTA 980
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ D ++RG +N + A++ F+Q + +P A +GRG ++ + A++D
Sbjct: 1110 PFAADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALAD 1169
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F I+ NP G + R + AL +AI D + +E + N+A RGI++
Sbjct: 1170 FNTVIKLNPKLGFVYDFRSRTYQALNRIEDAITDADQWIELQANAASYTR-RGILHVLGA 1228
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ + A+ D + L+ + LGL G K+A +AI+LD + E L
Sbjct: 1229 NPSLALNDFQQAITLNPKAIIPTINLGLIYYEQGNRKQAIAQFRQAIELDSSLAEPQLAL 1288
Query: 558 -TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
T Y + ++A+ Q L D +F + L+
Sbjct: 1289 ATALYPR--DQQQAIALAQSALKQDPKFREVEFLK 1321
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 21/240 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + GK AI+ F Q ++ P R + AI+D+T+AI+
Sbjct: 939 ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +RG+ LG+ EA D K L+ EP+ + R V K + A+ D
Sbjct: 999 PKDLSTYIQRGKVYRTLGQEAEANADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALAD 1058
Query: 506 LSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ +KL + + L ++ +Y++A + KA+ L N F
Sbjct: 1059 YTQAIKLAPQTPLQRSLLHSSRAQMYGNLQQYEQANSDYSKALALLPN------PTVPFA 1112
Query: 562 QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
DL E AL Q + I+ + AY RG L G +++ A+ D ++
Sbjct: 1113 ADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALADFNT 1172
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAI 442
+ R IAQ ++ A ++ F Q L+ D Y A RG + +LE AI+DF++AI
Sbjct: 905 QYQRAIAQFDQ---AIEVADFPQQLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAI 961
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P ++ R AL EAI D ++A+E P +RG V A
Sbjct: 962 ELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIQRGKVYRTLGQEAEA 1021
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ------LDRNFL----- 551
D ++ + + Y S+ Y +A + +AI+ L R+ L
Sbjct: 1022 NADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALADYTQAIKLAPQTPLQRSLLHSSRA 1081
Query: 552 EAWGHLTQFYQDLANSEKALECL 574
+ +G+L Q+ Q ++ KAL L
Sbjct: 1082 QMYGNLQQYEQANSDYSKALALL 1104
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 23/251 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
+RG A + +A++ + Q + D A IG GT R+ + AI+ F +AI+
Sbjct: 861 NRGDAYAALNQPEAALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVA 920
Query: 444 --------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
G A+ RG + LG+ +AI D S+A+E P + R +
Sbjct: 921 DFPQQLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTA 980
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D + +++ ++ S Y G ++G+ +A K +Q + + + +
Sbjct: 981 LNRYQEAIADYTQAIEIAPKDLSTYIQRGKVYRTLGQEAEANADFQKVLQTEPSDSQGYE 1040
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH--------GLGQHKKAIKD 607
Y+ L +AL Q + + + L+ LLH L Q+++A D
Sbjct: 1041 ARADVYKSLKRYPEALADYTQAI----KLAPQTPLQRSLLHSSRAQMYGNLQQYEQANSD 1096
Query: 608 LSSGSRTMMPH 618
S + ++P+
Sbjct: 1097 YSK-ALALLPN 1106
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 5 KLLDSRYRLNK-THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL 63
K+L + YRL K + + ++ +++ A + + + L L + +A+ +D+ +
Sbjct: 623 KVLSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVV--LSVLYRYPEALTAIDAAI 680
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
AQ+ NR + +++ ++ + ++A+++DP + AY +G +S L R +EA+
Sbjct: 681 AQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAI 740
Query: 124 S 124
+
Sbjct: 741 A 741
>gi|440752170|ref|ZP_20931373.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176663|gb|ELP55936.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 266
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + +++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S +TE + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 55 AESYWTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTAL 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 115 EGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWA 174
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +L +A++ ++ + F +L GQ +A
Sbjct: 175 QANLALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|157964603|ref|YP_001499427.1| hypothetical protein RMA_0732 [Rickettsia massiliae MTU5]
gi|157844379|gb|ABV84880.1| Tetratricopeptide repeat-containing protein [Rickettsia massiliae
MTU5]
Length = 400
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 113/219 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G++ GKY AI +++ +K P + EA +G + + AI +F A++
Sbjct: 134 NKGVSYKKLGKYQEAIRLYNIAIKYKPSFAEAYNNKGDTLNSLGKYQEAIENFDLALKYA 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ +G + LG+ EAI++ +L+++P+ A+ + + + + A+++
Sbjct: 194 PRYPEAYYNKGISLINLGQHQEAIKNYDISLKYKPDYANAYYNKATSLMQLGKYQEAIKN 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K +N+ AY G S +G+ ++A + + AI+ NF A+ + ++ L
Sbjct: 254 FDSVIKYQCDNEDAYNLKGCIFSILGKQQEAIKNYDLAIKYKPNFAAAYCNKGTSFRKLG 313
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ A++ + ++++Y +G++L LG++K+A
Sbjct: 314 KYQDAIKSYDLAIKYKSDYAESYLEKGIVLVNLGKYKEA 352
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI+ +N G++ AI +D LK P Y A + T+ + + AI +F I+
Sbjct: 202 NKGISLINLGQHQEAIKNYDISLKYKPDYANAYYNKATSLMQLGKYQEAIKNFDSVIKYQ 261
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ +G + LG+ EAI++ A++++PN A +G K + A++
Sbjct: 262 CDNEDAYNLKGCIFSILGKQQEAIKNYDLAIKYKPNFAAAYCNKGTSFRKLGKYQDAIKS 321
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + +Y G+ L ++G+YK+A+E A + N +E + + + + L
Sbjct: 322 YDLAIKYKSDYAESYLEKGIVLVNLGKYKEAKENFNLAFKYKSNLIEEYEAIIKALRQLG 381
Query: 566 N 566
N
Sbjct: 382 N 382
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F + R + ++ GKY AI +D +K + +G A + AI+++ AI
Sbjct: 65 FNIGRSLYKL--GKYKKAIKNYDLAIKYKTDCAKCYNNKGRALNELANHQEAITNYDLAI 122
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + EA+ +G + LG+ EAI+ + A++++P+ A+ + +G + A
Sbjct: 123 KYDIDFAEAYNNKGVSYKKLGKYQEAIRLYNIAIKYKPSFAEAYNNKGDTLNSLGKYQEA 182
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E+ +K AY G++L ++G++++A + + +++ ++ A+ +
Sbjct: 183 IENFDLALKYAPRYPEAYYNKGISLINLGQHQEAIKNYDISLKYKPDYANAYYNKATSLM 242
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L ++A++ V+ AY+L+G + LG+ ++AIK+
Sbjct: 243 QLGKYQEAIKNFDSVIKYQCDNEDAYNLKGCIFSILGKQQEAIKN 287
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ E + G++ LG+ +AI++ A++++ + A + +G + +
Sbjct: 54 IQDPNILAEEYFNIGRSLYKLGKYKKAIKNYDLAIKYKTDCAKCYNNKGRALNELANHQE 113
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + +K D + AY G++ +G+Y++A + AI+ +F EA+ +
Sbjct: 114 AITNYDLAIKYDIDFAEAYNNKGVSYKKLGKYQEAIRLYNIAIKYKPSFAEAYNNKGDTL 173
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L ++A+E L R+ +AY+ +G+ L LGQH++AIK+
Sbjct: 174 NSLGKYQEAIENFDLALKYAPRYPEAYYNKGISLINLGQHQEAIKN 219
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI ++ AI+ + + +G+A L EAI + A++++ + A+ + +G+
Sbjct: 80 AIKNYDLAIKYKTDCAKCYNNKGRALNELANHQEAITNYDLAIKYDIDFAEAYNNKGVSY 139
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K + A+ + +K AY G L+S+G+Y++A E A++ + EA
Sbjct: 140 KKLGKYQEAIRLYNIAIKYKPSFAEAYNNKGDTLNSLGKYQEAIENFDLALKYAPRYPEA 199
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + +L ++A++ L ++ AY+ + L LG++++AIK+ S
Sbjct: 200 YYNKGISLINLGQHQEAIKNYDISLKYKPDYANAYYNKATSLMQLGKYQEAIKNFDS 256
>gi|411116996|ref|ZP_11389483.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410713099|gb|EKQ70600.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 369
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + ++ D +G +Y A+ F+ +L+ P Y EA +GRG A +
Sbjct: 135 RALEDRTDCADAWYCQGFCLYATHRYEGAVQHFNHVLELQPDYQEAYVGRGDALRALGDF 194
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAI+ + +A++ + E + Q LG EA+Q L + E + + + +G
Sbjct: 195 EAAIASYDKALELGANDLEVMFHQAQCLRQLGRLEEALQTLQRVTEANASHWEAWYAQGG 254
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ K DF AA+ D V L+ + A+ G+AL ++ + +A ++ KA++L N
Sbjct: 255 IHLKLGDFEAALADYQQVVALNPNSYEAWFNQGVALKNLNQLPEAVTSYDKALELRPNDH 314
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
AW + + E A+ C +VL ++ +KA R +L
Sbjct: 315 RAWNNRGSVLVSMGCLEDAIACFDKVLELNPDDAKAQQNRLIL 357
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++++ VD + I +G Y +AI+ +Q+++ P + + +G + E AI
Sbjct: 3 TEAVDVDSIFQQSIELSLQGNYEAAIAALNQVIELQPDIWDVWVEKGRLLHSLGQFEDAI 62
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ F +AI P A G ALG A Q L+ EPN +D + G+ +
Sbjct: 63 ACFEQAIALQPDAAIPHYSLGWTTYALGNYELAAQSFQTVLKLEPNFSDGYYSLGLTLYA 122
Query: 496 FKDFNAAV-------EDLSAC---------------------------VKLDKENKSAYT 521
+ AA+ ED + C ++L + + AY
Sbjct: 123 SGQYEAAIGYLHRALEDRTDCADAWYCQGFCLYATHRYEGAVQHFNHVLELQPDYQEAYV 182
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G AL ++G+++ A ++ KA++L N LE H Q + L E+AL+ LQ+V +
Sbjct: 183 GRGDALRALGDFEAAIASYDKALELGANDLEVMFHQAQCLRQLGRLEEALQTLQRVTEAN 242
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A++ +G + LG + A+ D
Sbjct: 243 ASHWEAWYAQGGIHLKLGDFEAALAD 268
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A F +LK +P + + G + EAAI A++ +AW
Sbjct: 90 GNYELAAQSFQTVLKLEPNFSDGYYSLGLTLYASGQYEAAIGYLHRALEDRTDCADAWYC 149
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A+Q + LE +P+ + RG DF AA+ ++L
Sbjct: 150 QGFCLYATHRYEGAVQHFNHVLELQPDYQEAYVGRGDALRALGDFEAAIASYDKALELGA 209
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + L +G ++A + + + + + EAW + L + E AL
Sbjct: 210 NDLEVMFHQAQCLRQLGRLEEALQTLQRVTEANASHWEAWYAQGGIHLKLGDFEAALADY 269
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HLIWN 622
QQV+ ++ +A+ +G+ L L Q +A+ + + P H WN
Sbjct: 270 QQVVALNPNSYEAWFNQGVALKNLNQLPEAVTSYDK-ALELRPNDHRAWN 318
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D S G+ G+Y +AI + L++ +A +G E A+ F
Sbjct: 111 DGYYSLGLTLYASGQYEAAIGYLHRALEDRTDCADAWYCQGFCLYATHRYEGAVQHFNHV 170
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P EA+ RG A ALG+ AI KALE N +++ + +
Sbjct: 171 LELQPDYQEAYVGRGDALRALGDFEAAIASYDKALELGANDLEVMFHQAQCLRQLGRLEE 230
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ L + + + A+ G +G+++ A + + + L+ N EAW +
Sbjct: 231 ALQTLQRVTEANASHWEAWYAQGGIHLKLGDFEAALADYQQVVALNPNSYEAWFNQGVAL 290
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++L +A+ + L + +A++ RG +L +G + AI
Sbjct: 291 KNLNQLPEAVTSYDKALELRPNDHRAWNNRGSVLVSMGCLEDAI 334
>gi|443329565|ref|ZP_21058150.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
gi|442790903|gb|ELS00405.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
Length = 486
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A+R F T I+ + DF +S G ++ + Y AI+ F++ L + ++L GR
Sbjct: 214 AERGNLFISTNITLPQ----DF-VSLGRRKLKQKDYRGAIAEFNRALASNINDLDSLSGR 268
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A ++ A DF +Q +P+ A RG E +AI D S+A+ P+
Sbjct: 269 GEAYLILKDYSMANKDFDAVLQRDPNNINALLYRGVTYMISEEKDKAIIDFSQAISINPD 328
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEAH 540
RG + K+F+ A+ D ++L + A Y++LG+ ++ EY KA +
Sbjct: 329 FGLAYLLRGTIYASRKEFDKAIADYQEPIRLGSDFAVASYSFLGMLHMNLEEYDKAIGYY 388
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI + E + Y L KA+ + + +D + AY LRGL + LG
Sbjct: 389 TEAISFNPKITEIYLSRGLIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGD 448
Query: 601 HKKAIKDL 608
KKAI D
Sbjct: 449 EKKAIDDF 456
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A + Y+ A FD +L+ DP AL+ RG E + AI DF++AI N
Sbjct: 267 GRGEAYLILKDYSMANKDFDAVLQRDPNNINALLYRGVTYMISEEKDKAIIDFSQAISIN 326
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDL--------------------------------- 472
P G A+ RG A+ E +AI D
Sbjct: 327 PDFGLAYLLRGTIYASRKEFDKAIADYQEPIRLGSDFAVASYSFLGMLHMNLEEYDKAIG 386
Query: 473 --SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
++A+ F P +I RG++ ++ +++N A+ D + + +D + AY GL+ + +
Sbjct: 387 YYTEAISFNPKITEIYLSRGLIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDL 446
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
G+ KKA + KA L + G TQ YQ+ ++ + L+ +
Sbjct: 447 GDEKKAIDDFQKAADL----YQKQGD-TQLYQEAMDTIRDLQLYE 486
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMY-------PEALIGRGTAR 425
S+++ I V+ R I++ N GK Y + I + + + ++ P+ + G +
Sbjct: 182 SEARLIGVNGRF---ISEGNTGKVYGAGIPLEIYLAERGNLFISTNITLPQDFVSLGRRK 238
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q++ AI++F A+ SN + ++ RG+A L + A +D L+ +PN+ +
Sbjct: 239 LKQKDYRGAIAEFNRALASNINDLDSLSGRGEAYLILKDYSMANKDFDAVLQRDPNNINA 298
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG+ ++ + A+ D S + ++ + AY G +S E+ KA + + I+
Sbjct: 299 LLYRGVTYMISEEKDKAIIDFSQAISINPDFGLAYLLRGTIYASRKEFDKAIADYQEPIR 358
Query: 546 LDRNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L +F + ++ L + +L +KA+ + + + + ++ Y RGL+ + L ++ KA
Sbjct: 359 LGSDFAVASYSFLGMLHMNLEEYDKAIGYYTEAISFNPKITEIYLSRGLIYYRLEEYNKA 418
Query: 605 IKDLSSG 611
I D + G
Sbjct: 419 IADCTKG 425
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
K I + E +R+ S A A + + + + +L + KAI ++ + +I +I +R
Sbjct: 348 KAIADYQEPIRLGSDFAVASYSFLGMLHM-NLEEYDKAIGYYTEAISFNPKITEIYLSRG 406
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
Y +LE + I DC K + +DP+ AY+L+G +++ LG +++A+ ++K
Sbjct: 407 LIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAIDDFQK-------- 458
Query: 137 SADLKQ 142
+ADL Q
Sbjct: 459 AADLYQ 464
>gi|434386918|ref|YP_007097529.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428017908|gb|AFY94002.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 376
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
++N + S++ ++ +F +R IA G AI +D+++K +P +
Sbjct: 64 QKNYTGAIADFSQAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRVIKLNPQSANSYF 123
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
R A+A + + A+SD+ I+ P + +A+ RG A G+ AI D S+ L +
Sbjct: 124 NRAVAKAKFGDKQGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITGAIADFSQILNLQ 183
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN AD RG+ ++ D A+ D ++ + AY A + +G+ + A
Sbjct: 184 PNRADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMAD 243
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AIQL+ N+ ++ + L + A+ + + + ++ Y+ RGL +
Sbjct: 244 YDRAIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQ 303
Query: 600 QHKKAIKDLS 609
A KD +
Sbjct: 304 DLAGATKDFT 313
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ + + S D L+RG G AI+ F QIL P +A + RG A+ +
Sbjct: 144 RVIEIEPKSTDAYLNRGNLLQASGDITGAIADFSQILNLQPNRADAYLNRGLAKYQSGDR 203
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ AI++NP+ A+ R A+A LG++ A+ D +A++ N + R
Sbjct: 204 QGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMADYDRAIQLNSNYYLSYYSRAN 263
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D + A+ D ++L + Y GLA I + A + KAI+LD NF
Sbjct: 264 LRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQDLAGATKDFTKAIELDPNFA 323
Query: 552 EAW 554
EA+
Sbjct: 324 EAY 326
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----------FQR 429
D L+RG+A+ G AI+ +D ++ +P Y A R A+A + R
Sbjct: 187 ADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMADYDR 246
Query: 430 ELE-----------------------AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
++ AI+D+ ++IQ P + RG AR + +
Sbjct: 247 AIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQDLA 306
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A +D +KA+E +PN A+ + RG K+ AV DL +L
Sbjct: 307 GATKDFTKAIELDPNFAEAYYNRGTARQALKERGGAVSDLKTAAQL 352
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI D S+A++ PN ++ R I D A+++ +KL+ ++ ++Y +A
Sbjct: 70 AIADFSQAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRVIKLNPQSANSYFNRAVAK 129
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+ G+ + A + + I+++ +A+ G+L Q D+ A+ Q+L +
Sbjct: 130 AKFGDKQGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITG---AIADFSQILNLQPNR 186
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG-SRTMMPHLIWNLTRW 626
+ AY RGL + G + AI D HL +N W
Sbjct: 187 ADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAW 229
>gi|423065433|ref|ZP_17054223.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406713126|gb|EKD08300.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 243
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 93/212 (43%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ ++S+D L R A G++A A + + +I+ P P RG R Q L
Sbjct: 5 VAEISTLSLDELLERAFATSQAGRFAEAENYWTEIINRYPDNPAMWSNRGNIRVSQNRLT 64
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+ AI+ P+A + + RG A LG +AI D ++ LE P+ A + RG
Sbjct: 65 EAIGDYNRAIELAPTAADPYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNA 124
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+++ AA+ D +LD A LAL GE K+A I+ NF +
Sbjct: 125 EAGQENWEAAIADYFQAAELDPNYAFARANYALALYQTGETKEAIRNIKNLIRKYPNFAD 184
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
LT D +A + +D R+
Sbjct: 185 MRAALTACLWDSGKIGEAESNWVAAIGLDPRY 216
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI EG++ I+I ++ LK +P Y +A G A LEAA+ F +A+ N
Sbjct: 53 SLGIIYGIEGRWQELIAILEKALKLEPNYSDAHNYIGIALKRLDNLEAAVESFQKALSIN 112
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ ++ G A G+ AI L A++F+P+ ++ + GI + AA+
Sbjct: 113 PNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINY 172
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ + L A+ LGLAL + GE A + +KA+++ F EA +L Y +
Sbjct: 173 LNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQG 232
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--SRTMMPHLIWNL 623
+ E A+ + L + + +A + G+ G+ AI +T P + +NL
Sbjct: 233 DIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNL 292
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + EGK SAI+ + P + EA G A + AAI+ ++ P+
Sbjct: 123 GNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPA 182
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G A A GE AI KALE +P + + G + D A+ +
Sbjct: 183 FPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFN 242
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L A LG+A + GE A + KA+++ +F E + +L Y D N
Sbjct: 243 KALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNI 302
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E A+ ++ L + + + +A + G L G+ AI
Sbjct: 303 ETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAI 340
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 348 LSFKWDMLKETSN-----EAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYAS 399
L KW+ + +N +AK + K+ I DF + G +++G +
Sbjct: 245 LLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIET 304
Query: 400 AISIFDQ--ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
AI+ F + ILKE+ YPEAL G + + EL+AAI+ + +A+ PS EA G
Sbjct: 305 AINFFKKALILKEN--YPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGC 362
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A G+ +I+ KAL P+ +IL G + D AA+ + + +
Sbjct: 363 VYRAQGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYP 422
Query: 518 SAYTYLGLALSSIGEYKKAEEAH 540
+A+ L L L S G+Y + H
Sbjct: 423 TAHYNLSLCLLSKGDYHNGWQQH 445
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+A +G+ AIS F + L+ P +PEA G Q ++E AI+ F +A+
Sbjct: 189 SLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA G A A GE AI KALE + + ++ + G + + A+
Sbjct: 249 WNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINF 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A LG +L GE A A+ KA+ ++ EA +L Y+
Sbjct: 309 FKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQG 368
Query: 566 NSEKALECLQQVL 578
+ E ++ ++ L
Sbjct: 369 DLENSIRIFKKAL 381
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 3/244 (1%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
+AK K ++ K+ I +F + G +N+G +AI+ F++ L YPEA
Sbjct: 195 QAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEA 254
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L G A + E+ AI+ + +A++ E + G G AI KAL
Sbjct: 255 LNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALI 314
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ N + L+ G + + +AA+ + + A LG + G+ + +
Sbjct: 315 LKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSI 374
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
KA+ L + E +L ++ + E A+ + + + A++ L L
Sbjct: 375 RIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAHYNLSLCLLS 434
Query: 598 LGQH 601
G +
Sbjct: 435 KGDY 438
>gi|427737000|ref|YP_007056544.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
gi|427372041|gb|AFY55997.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
Length = 722
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+S +D+ ++ +P Y E+ GRG + + AI F +A++ P + + RG+A
Sbjct: 393 ALSAYDKAIEIEPNYQESWRGRGFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEAL 452
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EAIQ KA+E +P + + V + K + A+ ++L N+ A
Sbjct: 453 RNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELA 512
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G AL ++ + A +A+ KA+Q +F +AW L +A+E Q+VL
Sbjct: 513 WYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLK 572
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
A + +G LH + ++++A+
Sbjct: 573 YQPNNFDALYSKGWALHQMQRYEQAV 598
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ ++ +AI+ P +AW +G+ L EA+ KA+E EPN + RG
Sbjct: 357 EDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAYDKAIEIEPNYQESWRGRGF 416
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V K K + A+ +KL E+ G AL ++ Y +A +++ KA++L +
Sbjct: 417 VLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPEYD 476
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+AW + +L + AL +QV+ + A++ G L L + + A+K S
Sbjct: 477 QAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYS 534
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ + Q ++ P Y +A G+G + A+S + +AI+ P+ E+W+ R
Sbjct: 355 RYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAYDKAIEIEPNYQESWRGR 414
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EAI KAL+ +P S +L+ RG K ++ A++ V+L E
Sbjct: 415 GFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPE 474
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ L ++ YK A + + I+L N AW + +L AL+
Sbjct: 475 YDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYS 534
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + F +A+ RG +L L ++ +A++
Sbjct: 535 KAVQYKPSFYQAWLSRGNILITLRRYPEAVESF 567
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N +Y AI +D+ ++ P Y +A + + + A++ + + I+
Sbjct: 447 ARGEALRNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLK 506
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW G A L +A++ SKA++++P+ RG + + + AVE
Sbjct: 507 PNNELAWYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVES 566
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K N A G AL + Y++A ++ KAI RN + W L
Sbjct: 567 FQEVLKYQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQ 626
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+AL + + K S++++ +G L LG+ ++A+
Sbjct: 627 KYPEALSAYNRAIRYKKDHSESWYSKGNTLFNLGKDEEAL 666
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 88/195 (45%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y A++ ++Q+++ P A G A A+ +++A+Q PS +AW
Sbjct: 488 NLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAW 547
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG L EA++ + L+++PN+ D L+ +G + + + AV +
Sbjct: 548 LSRGNILITLRRYPEAVESFQEVLKYQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQ 607
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + + G ++ + +Y +A A+ +AI+ ++ E+W +L E+AL
Sbjct: 608 RRNSYKVWYSRGNSVYKLQKYPEALSAYNRAIRYKKDHSESWYSKGNTLFNLGKDEEALA 667
Query: 573 CLQQVLYIDKRFSKA 587
+ + + +A
Sbjct: 668 AYNTAIKYNPDYREA 682
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A VN + A+ + + ++ P + +A + RG R A+ F E ++ P+
Sbjct: 517 GNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLKYQPN 576
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A +G A + +A+ KA+ NS + + RG +K + + A+ +
Sbjct: 577 NFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQKYPEALSAYN 636
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ K++ ++ G L ++G+ ++A A+ AI+ + ++ EA
Sbjct: 637 RAIRYKKDHSESWYSKGNTLFNLGKDEEALAAYNTAIKYNPDYREA 682
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 64/135 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG + +Y A+ F ++LK P +AL +G A + E A++ + +AI
Sbjct: 548 LSRGNILITLRRYPEAVESFQEVLKYQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQ 607
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
++ + W RG + L + EA+ ++A+ ++ + ++ + +G F A+
Sbjct: 608 RRNSYKVWYSRGNSVYKLQKYPEALSAYNRAIRYKKDHSESWYSKGNTLFNLGKDEEALA 667
Query: 505 DLSACVKLDKENKSA 519
+ +K + + + A
Sbjct: 668 AYNTAIKYNPDYREA 682
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ D L+++ ++ + + A+++ +++ E A+ G L + +K+A A+
Sbjct: 339 NAGD-LYKKANTFYELQRYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAY 397
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+++ N+ E+W L ++A+ + L + K + RG L L +
Sbjct: 398 DKAIEIEPNYQESWRGRGFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKR 457
Query: 601 HKKAIK 606
+ +AI+
Sbjct: 458 YDEAIQ 463
>gi|224071279|ref|XP_002303386.1| predicted protein [Populus trichocarpa]
gi|222840818|gb|EEE78365.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ANS KAL+C+ QVL ID RF+KAYHLRGLLL+G+G+H+KAIKDLS G
Sbjct: 1 MANSTKALDCINQVLQIDSRFAKAYHLRGLLLYGMGEHRKAIKDLSIG 48
>gi|354555592|ref|ZP_08974893.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|57864842|gb|AAW57017.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
gi|353552651|gb|EHC22046.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 279
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ +++ G Y +AI F + +K D +A RG + + E AI+D+ +AI+ N
Sbjct: 59 NKGVDEIDAGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELN 118
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A L ++I+D S+A+E E N AD G K AA+
Sbjct: 119 AEFAYAYGNRCYAYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILA 178
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ + +++ N AY LA + +G+ +A E + KAIQ + NF +A+ + +T+F
Sbjct: 179 YNQAIAINENNPKAYYNRALAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRF--K 236
Query: 564 LANSEKALECLQQ 576
L EKA+ L++
Sbjct: 237 LKEIEKAIADLEK 249
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI FTE+I+ + + +A+ RG + L + EAI D +KA+E A R
Sbjct: 71 QAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYGNRCY 130
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ K++ +++D S ++L+ Y YLG A + ++ A A+ +AI ++ N
Sbjct: 131 AYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYNQAIAINENNP 190
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ + Y L S +A+E + + + F+ AYH RG+ L + +KAI DL
Sbjct: 191 KAYYNRALAYNRLGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKEIEKAIADLEKA 250
Query: 612 SR 613
+
Sbjct: 251 AE 252
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 355 LKETSNEAKRNKKF----------CVTRISKSKSISVDFRLSRG---IAQVNEGKYASAI 401
L ET +A N+ + + +K+ ++ +F + G A Y +I
Sbjct: 83 LDETDADAYYNRGYSYLVLEQFEEAINDYNKAIELNAEFAYAYGNRCYAYYQLKNYEQSI 142
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
Q ++ + Y + I G A+ + +AAI + +AI N + +A+ R A
Sbjct: 143 KDCSQAIELEANYADFYIYLGNAKDDLKMHQAAILAYNQAIAINENNPKAYYNRALAYNR 202
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
LG+S++A++D +KA++F PN AD H RG+ FK K+ A+ DL +L
Sbjct: 203 LGQSLQAVEDYTKAIQFNPNFADAYHNRGVTRFKLKEIEKAIADLEKAAEL 253
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G G AI+ +++++ + AD + RG + F A+ D + ++
Sbjct: 57 WYNKGVDEIDAGNYQAAIEAFTESIKLDETDADAYYNRGYSYLVLEQFEEAINDYNKAIE 116
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ E AY A + Y+++ + +AI+L+ N+ + + +L DL + A+
Sbjct: 117 LNAEFAYAYGNRCYAYYQLKNYEQSIKDCSQAIELEANYADFYIYLGNAKDDLKMHQAAI 176
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + I++ KAY+ R L + LGQ +A++D +
Sbjct: 177 LAYNQAIAINENNPKAYYNRALAYNRLGQSLQAVEDYT 214
>gi|424836062|ref|ZP_18260719.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
gi|365977464|gb|EHN13563.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
Length = 251
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T AI+ NPS A+ R + L + +AI+D +K LE +P D + R IV + K
Sbjct: 45 YTIAIKLNPSFVNAYFNRAELYKELEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIK 104
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+N A++DL V +DK K+ Y G+ I +YK+A KAI D EA+ +
Sbjct: 105 DYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENR 164
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y +L +++ + + Y RG + + + ++KAI D
Sbjct: 165 AFAYYNLKKYSPSIKDYTNAIKLTPENKNIYLNRGTIYYKIKNYEKAISD 214
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI +++IL+ DP + R ++ A+ D + + + + R
Sbjct: 71 KYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNR 130
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + A + +KA+ + ++ R + K ++ +++D + +KL E
Sbjct: 131 GMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPE 190
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
NK+ Y G I Y+KA ++KA+
Sbjct: 191 NKNIYLNRGTIYYKIKNYEKAISDYMKALN 220
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y A+ D+++ D Y RG + + A +FT+AI +
Sbjct: 95 NRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHED 154
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA++ R A L + +I+D + A++ P + +I RG + +K K++ A+ D
Sbjct: 155 SKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPENKNIYLNRGTIYYKIKNYEKAISD 214
Query: 506 LSACVKLDKENKSAY 520
+ +++ S Y
Sbjct: 215 YMKALNSKEKDPSFY 229
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 73/147 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E ++ + A++ P+ + R + + + +N A+ED + ++LD ++K Y
Sbjct: 38 SKEKMKFYTIAIKLNPSFVNAYFNRAELYKELEKYNKAIEDYNKILELDPKDKDCYNNRA 97
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+ I +Y KA + K + +D+++ + + + +A+ ++A + ++ D +
Sbjct: 98 IVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHEDSKD 157
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
S+AY R + L ++ +IKD ++
Sbjct: 158 SEAYENRAFAYYNLKKYSPSIKDYTNA 184
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 41/104 (39%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + Y A F + + ED EA R A ++ +I D+T AI+
Sbjct: 128 FNRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKL 187
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
P + RG + +AI D KAL + HE
Sbjct: 188 TPENKNIYLNRGTIYYKIKNYEKAISDYMKALNSKEKDPSFYHE 231
>gi|42527528|ref|NP_972626.1| TPR [Treponema denticola ATCC 35405]
gi|449111465|ref|ZP_21748062.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
33521]
gi|449113718|ref|ZP_21750202.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
35404]
gi|41818113|gb|AAS12537.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448958128|gb|EMB38865.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
35404]
gi|448958492|gb|EMB39223.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
33521]
Length = 369
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
I+ ++AY RG + L + +IKDL
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDL 282
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SG 611
G
Sbjct: 318 EG 319
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I Q+N KY I ++DP + RG + + AI D +++ NP+
Sbjct: 36 IYQMNLSKYERQI-------EKDPNNYKLYYVRGYYYSLSGYYDLAIHDINRSLKINPNY 88
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E+ RG A+ + EAI D S+ +E PN + R +F DF A+ D+++
Sbjct: 89 EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINS 148
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KLD ++ + G + +Y A + +A++L+ +A+ FY+ + +
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
AL + L + R + Y GL + L ++ AI
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAI 245
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|392411116|ref|YP_006447723.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
gi|390624252|gb|AFM25459.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
Length = 513
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ ++L DP A RG A + + E A +DF +A+Q +P EA+ RG+
Sbjct: 47 AIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYY 106
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A+QD S+ L + + +G F AA+ DL ++ + ++ A
Sbjct: 107 RQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDA 166
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G+A ++ + +AI+L+ +A L +E+AL+ +VL
Sbjct: 167 YFLRGVAHQNLKSLAASLSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLK 226
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLT 624
+D + A RG GLG ++ AI+DL+ S + P L L+
Sbjct: 227 LDPKNVDALTNRGWAKRGLGDYQGAIEDLTQ-SLKINPKLALALS 270
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A ++G+ A + F+Q +++DP EA RG + + A+ DF+ +
Sbjct: 66 FNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYYRQRSMFDKAVQDFSRTLTI 125
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + +G+A LG+ AI DL AL + +D RG+ + K A++
Sbjct: 126 NKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDAYFLRGVAHQNLKSLAASLS 185
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +N A LG L S G+ ++A +A+ + ++LD ++A + + L
Sbjct: 186 DFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDPKNVDALTNRGWAKRGL 245
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A+E L Q L I+ + + A R L + A+ D +
Sbjct: 246 GDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADYT 290
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ K +VD +RG A+ G Y AI Q LK +P AL R
Sbjct: 220 AYNRVLKLDPKNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQT 279
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++AA++D+T+ + + RG+ L + EA D ++AL+ EP+ +IL
Sbjct: 280 NRIDAAVADYTQLLSIKGADPGILFARGKLLLELKKPAEAETDFTRALQDEPDRPEILEY 339
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD- 547
R K +N A+ DL++ +K+D + A A + Y +A + +AI+LD
Sbjct: 340 RARARLMAKKYNEAIADLNSILKIDPADVEALLARAQAHEAESHYNEAIADYREAIRLDA 399
Query: 548 -RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +EA L + + ++A+ +V+ ++ A+ RG+ L G A +
Sbjct: 400 EKAGVEAQYGLAKNFLMNNQLDQAITQFSKVIELEPSHGLAWANRGVALKQKGDLASAAE 459
Query: 607 DL 608
D
Sbjct: 460 DF 461
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG + K A A + F + L+++P PE L R AR ++ AI+D ++
Sbjct: 304 FARGKLLLELKKPAEAETDFTRALQDEPDRPEILEYRARARLMAKKYNEAIADLNSILKI 363
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKD-FNAA 502
+P+ EA R QA A EAI D +A+ + A + + G+ NF + + A
Sbjct: 364 DPADVEALLARAQAHEAESHYNEAIADYREAIRLDAEKAGVEAQYGLAKNFLMNNQLDQA 423
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ S ++L+ + A+ G+AL G+ A E KA+
Sbjct: 424 ITQFSKVIELEPSHGLAWANRGVALKQKGDLASAAEDFRKAL 465
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N A+++S F++ ++ +P +AL G + + E A+ + ++ +P
Sbjct: 170 RGVAHQNLKSLAASLSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDP 229
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A RG A+ LG+ AI+DL+++L+ P A L R + + +AAV D
Sbjct: 230 KNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADY 289
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ + + + G L + + +AE +A+Q
Sbjct: 290 TQLLSIKGADPGILFARGKLLLELKKPAEAETDFTRALQ 328
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ + A++ S + D N AY G A S G+ +KA +A+Q D EA+
Sbjct: 43 NLDKAIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFAR 102
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
++Y+ + +KA++ + L I+K + + ++G GLGQ + AI DL R+
Sbjct: 103 GEYYRQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRS 159
>gi|149176894|ref|ZP_01855504.1| TPR repeat [Planctomyces maris DSM 8797]
gi|148844331|gb|EDL58684.1| TPR repeat [Planctomyces maris DSM 8797]
Length = 485
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG Q +L + + T AI+ NP + RG A A L + AI DL+KA
Sbjct: 82 EEFFLRGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKA 141
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E +P +A + R + AV+D + ++ ++ A GL ++ G+ K+
Sbjct: 142 IEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQ 201
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + +++ + ++A +L +L ++KALE L +VL ++ ++ AY RGL+
Sbjct: 202 ARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVW 261
Query: 596 HGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWPFIRRRLLCTRL 646
++ KAI D T+ L N+ F R+R+ +L
Sbjct: 262 QRRKEYDKAIAD---------------FTKAIELSPNSLKFYRQRMTVYQL 297
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEAL--IGRGTARAFQRELEAAI 435
+ RG A + + ASAI + ++ DP Y AL + RG A E A+
Sbjct: 117 YYFHRGSAWADLKQDASAIVDLTKAIEMDPKNAQYYYTRALFFMTRGGA-------ELAV 169
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DFT+AI+ P + +A RG A G+ +A D + LE +P+S D ++ G
Sbjct: 170 KDFTKAIECKPDSLQALNNRGLLFATTGKLKQARADFERVLEIKPDSIDAMNNLGFALMN 229
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ + A+E L+ ++L+ + +AY GL EY KA KAI+L N L+ +
Sbjct: 230 LNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKEYDKAIADFTKAIELSPNSLKFYR 289
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDK 582
YQ EK ++++++ K
Sbjct: 290 QRMTVYQLAEQPEKQKADEEKIIWLQK 316
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +GK A + +K +P RG+A A ++ +AI D T+AI+ +P
Sbjct: 87 RGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKAIEMDP 146
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R G + A++D +KA+E +P+S L+ RG++ A D
Sbjct: 147 KNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQARADF 206
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WGHLTQ 559
+++ ++ A LG AL ++ E KA E + +QL+ +L A W +
Sbjct: 207 ERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKE 266
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ + +A+ KA+E L ++ Y L
Sbjct: 267 YDKAIADFTKAIELSPNSLKFYRQRMTVYQL 297
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ + K S+D + G A +N + A+ + +++L+ +P Y A RG ++E
Sbjct: 208 RVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKEY 267
Query: 432 EAAISDFTEAIQSNPSAGEAWKRR---------GQARAALGESV---EAIQDLSKALEFE 479
+ AI+DFT+AI+ +P++ + +++R + + A E + + + L++ L
Sbjct: 268 DKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLAGLNERLAKT 327
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ +++ ER + A++D + V+L ++ Y G + + +
Sbjct: 328 PDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGALYLEENKLDRCIQE 387
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+AI++ EA+ + + E AL ++ ID+ +KAY +R G
Sbjct: 388 CSRAIKIQPQ-PEAYSVRGDAFMKQGDVEHALRDFERAKRIDEIVAKAYLMRSKSYKEQG 446
Query: 600 QHKKAIKD 607
+HKKA +D
Sbjct: 447 EHKKAAQD 454
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +R + + G A+ F + ++ P +AL RG A +
Sbjct: 139 TKAIEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGK 198
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ A +DF ++ P + +A G A L E+ +A++ L++ L+ P + RG
Sbjct: 199 LKQARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRG 258
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY--TYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+V + K+++ A+ D + ++L + Y L+ E +KA+E + +Q
Sbjct: 259 LVWQRRKEYDKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLA 318
Query: 549 NFLEAWGHL----------TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
E QFY EKA++ +++ + + + Y++RG L
Sbjct: 319 GLNERLAKTPDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGAL 374
>gi|284097303|ref|ZP_06385439.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
gi|283831177|gb|EFC35151.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
Length = 637
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG A + EL+ AI+DFT+A++ NP+ A+ RRG A G+ I D +K L
Sbjct: 113 AYFKRGIAYRHKGELDLAIADFTQALRLNPAHANAYIRRGIAYDKKGDHDLTIADYTKVL 172
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E +P++ H RG D + A+ED + ++ D N Y Y LA S G+Y KA
Sbjct: 173 ELDPDNMFAYHNRGRAYINKNDHDKAIEDFNKILEQDPANAEIYLYRVLAYSLKGDYDKA 232
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVL 578
K ++ N+ A HL + Y D + EK L+ + +
Sbjct: 233 IADCTKTLEFKPNYANA--HLCRGFAYIDQGDQEKFLDAFKDFV 274
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGIA +G + I+ + ++L+ DP A RG A + + + AI DF + ++
Sbjct: 149 IRRGIAYDKKGDHDLTIADYTKVLELDPDNMFAYHNRGRAYINKNDHDKAIEDFNKILEQ 208
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD---FNA 501
+P+ E + R A + G+ +AI D +K LEF+PN A+ RG D F
Sbjct: 209 DPANAEIYLYRVLAYSLKGDYDKAIADCTKTLEFKPNYANAHLCRGFAYIDQGDQEKFLD 268
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYK-KAEEAHLKAIQL 546
A +D + D+ K+ + +A YK +AEE KA +L
Sbjct: 269 AFKDFVKANEYDQALKTEVPAIYVAGQIADIYKDRAEEEGAKAFEL 314
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ +RG A GE AI D ++AL P A+ RGI K D + + D + +
Sbjct: 113 AYFKRGIAYRHKGELDLAIADFTQALRLNPAHANAYIRRGIAYDKKGDHDLTIADYTKVL 172
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD +N AY G A + ++ KA E K ++ D E + + Y + +KA
Sbjct: 173 ELDPDNMFAYHNRGRAYINKNDHDKAIEDFNKILEQDPANAEIYLYRVLAYSLKGDYDKA 232
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK---AIKDL 608
+ + L ++ A+ RG G +K A KD
Sbjct: 233 IADCTKTLEFKPNYANAHLCRGFAYIDQGDQEKFLDAFKDF 273
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 476 LEFEPNS-ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
LE EP+ A +RGI + + A+ D + ++L+ + +AY G+A G++
Sbjct: 103 LEQEPHEKASAYFKRGIAYRHKGELDLAIADFTQALRLNPAHANAYIRRGIAYDKKGDHD 162
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+ K ++LD + + A+ + + Y + + +KA+E ++L D ++ Y R L
Sbjct: 163 LTIADYTKVLELDPDNMFAYHNRGRAYINKNDHDKAIEDFNKILEQDPANAEIYLYRVLA 222
Query: 595 LHGLGQHKKAIKD 607
G + KAI D
Sbjct: 223 YSLKGDYDKAIAD 235
>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 2384
Score = 80.1 bits (196), Expect = 5e-12, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 96/220 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI +GKY A+ + Q L P PE L G A +LE AI+ + +A+ N
Sbjct: 76 SMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIAAYQQALNLN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA G A G+ EA+ +A+ +PN A+ H GIV + + A+
Sbjct: 136 QAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHY 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L AYT LG L G ++A + + + L N+ E + +L Q
Sbjct: 196 FRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A+ QQ L + F + G LL + + +AI
Sbjct: 256 KLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAI 295
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 6/225 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ F Q L P +P G ++ AI+ + +AI +P+
Sbjct: 248 GLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPN 307
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G A G+ EAI KALE PN + L G V AAV L
Sbjct: 308 YPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLE 367
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDL 564
V L + LG A E K+ +EA + A+ L E +L Q +
Sbjct: 368 QAVSLGPSYAEIHNNLGNAYQ---EQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYI 424
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A E ++ + I F+ Y+ G+ GQ ++A S
Sbjct: 425 GEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYS 469
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + Q + + P YPEAL G A Q +L+ AI+ + +A++ P+ EA G
Sbjct: 294 AIASYQQAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVL 353
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A+ L +A+ P+ A+I + G + K + A+ V L E
Sbjct: 354 KDQHKLEAAVSYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEV 413
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++ LG L IGE+++A E KAI++ +F + +L +++ ++A + L
Sbjct: 414 HSNLGNMLQYIGEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALE 473
Query: 580 IDKRFSKAY---HLRGLLLHGLGQ 600
+ F +A+ L LLL L Q
Sbjct: 474 LKPDFVEAHWNTALNHLLLGNLKQ 497
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G+ G+ A A ++ +L+EDP +AL G + E A F +
Sbjct: 8 ISTGLQYQRAGRVAEAEQVYKLLLREDPHSVDALNLLGALVYEDKRFEEAQEYFERVLSL 67
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A EA G A G+ EA++ +AL +PN ++L G + A+
Sbjct: 68 QPGA-EAHNSMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIA 126
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGE-------YKKA-------EEAH---------- 540
+ L++ A+ LG+A G+ Y++A EAH
Sbjct: 127 AYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQ 186
Query: 541 ----------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+AI L ++++A+ L Q N E+A+ C QQV+ + +++ ++
Sbjct: 187 NKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNN 246
Query: 591 RGLLLHGLGQHKKAI 605
GL L G+ ++AI
Sbjct: 247 LGLALQHQGKLEEAI 261
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +GK AI+ + + L+ P + EAL G Q +LEAA+S +A+ PS
Sbjct: 316 GNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLEQAVSLGPS 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E G A EAI A+ +P A++ G + +F A E
Sbjct: 376 YAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYIGEFEEAFEHFR 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++ + Y LG+A + G+ ++A A+ KA++L +F+EA + + L N
Sbjct: 436 KAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFVEAHWNTALNHLLLGNL 495
Query: 568 EKALEC----LQQVLYIDKRFSKAY 588
++ E Q +I++ S++Y
Sbjct: 496 KQGFEGYEWRFQWSRFIEQNPSRSY 520
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K AI F Q + P Y +A G+ Q E AI+ + + + P+
Sbjct: 180 GIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPN 239
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + G A G+ EAI +AL +PN + + G + + + A+
Sbjct: 240 YAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQ 299
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ A LG AL G+ +A + KA++L NF+EA +L +D
Sbjct: 300 QAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKL 359
Query: 568 EKALECLQQVLYIDKRFSKAYHLRG 592
E A+ L+Q + + +++ ++ G
Sbjct: 360 EAAVSYLEQAVSLGPSYAEIHNNLG 384
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------N 481
R+L+ AI+ + +++N + + + A G+ EA+ KAL +P N
Sbjct: 922 RKLDEAIAYYQNTLKANDNHLDTYNNLAVALHEQGKLDEAMPYYQKALALKPDNPDAHNN 981
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A++L ER + A+ + + AY LGLA + G + A EA+
Sbjct: 982 YANLLRER-------SRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYR 1034
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+ +F +A HL ++L N +A QQ + + ++KAY+ G + G
Sbjct: 1035 QAIERKPHFPQALNHLGNALKELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDL 1094
Query: 602 KKAIK 606
+ A++
Sbjct: 1095 QTAVQ 1099
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 63/163 (38%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ + G A ++ QIL++ +AL G + E A ++
Sbjct: 1476 LNTALQLYQSGNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVEL 1535
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E WK G A G+ EAI +A+ EPNS D+ + AV
Sbjct: 1536 QPQFAEGWKNLGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVT 1595
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V L E + LG AL G ++A ++ +AI L+
Sbjct: 1596 HAERVVALKPEFADGHYNLGYALRRAGRIEEAIASYRQAIALN 1638
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 69/166 (41%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+A +GK A+ + + L P P+A + L+ AI + +AI + P
Sbjct: 949 AVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLLRERSRLDEAIYHYQQAIAARPD 1008
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A A G A + +A+E +P+ L+ G + +F A
Sbjct: 1009 YPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNALKELGNFAEAARYYQ 1068
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ L + AY G G+ + A + + +A ++D NF EA
Sbjct: 1069 QAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114
Score = 47.8 bits (112), Expect = 0.022, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 70/143 (48%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EA L + L+ + + AD LH G++ + K F A + + V+L + +
Sbjct: 1486 GNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVELQPQFAEGWKN 1545
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG AL G++ +A ++ +AI L+ N + +L+ +L +A+ ++V+ +
Sbjct: 1546 LGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVTHAERVVALKP 1605
Query: 583 RFSKAYHLRGLLLHGLGQHKKAI 605
F+ ++ G L G+ ++AI
Sbjct: 1606 EFADGHYNLGYALRRAGRIEEAI 1628
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 57/141 (40%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + Q + P YP+A G A + +A + +AI+ P +A G A
Sbjct: 995 AIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNAL 1054
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EA + +A+ +P+ A + G + D AV+ ++D A
Sbjct: 1055 KELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114
Query: 520 YTYLGLALSSIGEYKKAEEAH 540
+ L L G+ ++ E +
Sbjct: 1115 HWNKALTLLLGGDLRRGFEEY 1135
>gi|357029131|ref|ZP_09091139.1| hypothetical protein MEA186_30072 [Mesorhizobium amorphae
CCNWGS0123]
gi|355536213|gb|EHH05489.1| hypothetical protein MEA186_30072 [Mesorhizobium amorphae
CCNWGS0123]
Length = 284
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y +A+ FD ++ +P + +A R + F EAA++D+ +IQ N
Sbjct: 71 RGSAYGRGGQYQAALKDFDTAIQLNPNFYQAYSNRALIQRFLGNQEAALADYNRSIQINS 130
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG G + EA D KA++ + A H RG++ A+ED
Sbjct: 131 NYDAAYIGRGNLYRKAGRTTEAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDF 190
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y GL+ ++ + A AI+LD EAW + Y+ +
Sbjct: 191 STAISLAPDAAEPYNGRGLSYLAMNDEDNAFSDFNMAIKLDGKNAEAWANQALIYERRGD 250
Query: 567 SEKALECLQQVLYIDKRFSKA 587
+A + ++ +++D + A
Sbjct: 251 KVRASKSYREAVHLDPTYQPA 271
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS ++ P + + RG + + AA++D ++L+ AY+
Sbjct: 47 STENISSLSAVIQRNPQDPEAYNVRGSAYGRGGQYQAALKDFDTAIQLNPNFYQAYSNRA 106
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +G + A + ++IQ++ N+ A+ Y+ + +A Q+ + +D
Sbjct: 107 LIQRFLGNQEAALADYNRSIQINSNYDAAYIGRGNLYRKAGRTTEAFNDFQKAIQLDTTD 166
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL+ GQHK AI+D S+
Sbjct: 167 ARAYHNRGLIYQSQGQHKFAIEDFST 192
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAFQRELEAAISDFTEAIQS 444
+R + Q G +A++ +++ ++ + Y A IGRG R R EA +DF +AIQ
Sbjct: 104 NRALIQRFLGNQEAALADYNRSIQINSNYDAAYIGRGNLYRKAGRTTEA-FNDFQKAIQL 162
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + A+ RG + G+ AI+D S A+ P++A+ + RG+ D + A
Sbjct: 163 DTTDARAYHNRGLIYQSQGQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLAMNDEDNAFS 222
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D + +KLD +N A+ L G+ +A +++ +A+ LD + A
Sbjct: 223 DFNMAIKLDGKNAEAWANQALIYERRGDKVRASKSYREAVHLDPTYQPA 271
>gi|373115713|ref|ZP_09529880.1| hypothetical protein HMPREF0995_00716 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670100|gb|EHO35188.1| hypothetical protein HMPREF0995_00716 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 624
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG F + A+ DFT+A + + + +G LGE+ AI++ S++
Sbjct: 346 EAYWERGKLYYFANDYAQALEDFTKAKELGMEDSKLYWYKGFCYRRLGETELAIREYSRS 405
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + S ++ RG+ K ++ AV D + +KL +K Y G A ++ EYKK
Sbjct: 406 LELKETS-EVYRNRGLCFTTVKLYDKAVLDFTRAIKLPPGDKRLYRERGSAYQALEEYKK 464
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A+ + KA++L+ E + L + L ++AL+ Q+ + ID +++AY+ RG++
Sbjct: 465 AQADYEKALELEPADAELYTTLGDVQERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVY 524
Query: 596 -------HGLGQHKKAIK 606
L H+KA+K
Sbjct: 525 LSQMETEKALADHRKAVK 542
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
LKETS E RN+ C T + Y A+ F + +K P
Sbjct: 408 LKETS-EVYRNRGLCFTTVKL---------------------YDKAVLDFTRAIKLPPGD 445
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
RG+A E + A +D+ +A++ P+ E + G + LGE EA+Q K
Sbjct: 446 KRLYRERGSAYQALEEYKKAQADYEKALELEPADAELYTTLGDVQERLGEVQEALQSYQK 505
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++ +PN A + RG+V + A+ D VKL + + +G+ L+ + Y
Sbjct: 506 AIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAGDRALYHVNVGIVLNRLERYS 565
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+A + KAI+LD + +A+ Y+ L +EKA
Sbjct: 566 EAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTEKA 601
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ DFT AI+ P ++ RG A AL E +A D KALE EP A++ G V
Sbjct: 431 AVLDFTRAIKLPPGDKRLYRERGSAYQALEEYKKAQADYEKALELEPADAELYTTLGDVQ 490
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFL 551
+ + A++ +++D AY G+ S E +KA H KA++L DR
Sbjct: 491 ERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAGDRALY 550
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ L +A+ + + +D ++KAY +R GL Q +KA +D
Sbjct: 551 HV--NVGIVLNRLERYSEAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTEKAERD 604
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 6 LLDSRYRLNKTHKTICEIDELVRVDSVMASAITAR--IELAKL---CSLRNWSKAIRILD 60
L D + RL + + + + +++D A A R + L+++ +L + KA+++
Sbjct: 486 LGDVQERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAG 545
Query: 61 SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKE 120
+ + NR LE + + C+KA++LDP +AY ++ A+ L + E
Sbjct: 546 DRALYHVNVGIVLNR------LERYSEAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTE 599
Query: 121 EALSVWE 127
+A WE
Sbjct: 600 KAERDWE 606
>gi|218530199|ref|YP_002421015.1| hypothetical protein Mchl_2240 [Methylobacterium extorquens CM4]
gi|240138554|ref|YP_002963026.1| hypothetical protein MexAM1_META1p1938 [Methylobacterium extorquens
AM1]
gi|418061679|ref|ZP_12699523.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|218522502|gb|ACK83087.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
CM4]
gi|240008523|gb|ACS39749.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|373564765|gb|EHP90850.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 286
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ AI+ F + ++ DP A R A +AA+ DF++AI ++
Sbjct: 73 TRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIAND 132
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R A G+ A+ DL+ A+ P SA+ H RG+V K A+ D
Sbjct: 133 PNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGD 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A + + + Y G +L S+G+Y KA E A+ ++ +W + Y+
Sbjct: 193 FAAAIDRNPFVAAPYAARGQSLISLGQYDKAIEDFNAALNVNAKDAGSWAYRGLAYEKTN 252
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A E QQ +D + A G + GL
Sbjct: 253 RRKEANESYQQAARLDPNNAVAKQGVGRMQGGL 285
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P A RG A A + AI+DF++AIQ +P++ A+ R A
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G + A+QD SKA+ +PN + R + D + A+ DL+ ++L E+ AY
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAY 173
Query: 521 TYLGLA-------LSSIGEYKKAEEAHLKAIQLDRN-FLEA-WGHLTQFYQDLANSEKAL 571
GL +IG++ A +DRN F+ A + Q L +KA+
Sbjct: 174 HARGLVRQKQNHNPEAIGDFAAA---------IDRNPFVAAPYAARGQSLISLGQYDKAI 224
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E L ++ + + ++ RGL + K+A + +R
Sbjct: 225 EDFNAALNVNAKDAGSWAYRGLAYEKTNRRKEANESYQQAAR 266
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + LS + + + AY G A + G++ +A KAIQLD N A+ +
Sbjct: 51 NVNIASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Y+ ++ A++ + + D FS AY R L G A+ DL+
Sbjct: 111 AYRQTGRADAAMQDFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLN 160
>gi|449116295|ref|ZP_21752746.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
gi|448954182|gb|EMB34965.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
Length = 369
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
I+ ++AY RG + L + +IKDL
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDL 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SG 611
G
Sbjct: 318 EG 319
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +S +++ +++DP + RG + + AI D +++ NP+ E+ RG
Sbjct: 37 YQMNLSKYERQIEKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNYEESILLRG 96
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A+ + EAI D S+ +E PN + R +F DF A+ D+++ +KLD ++
Sbjct: 97 LIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINSAIKLDPKD 156
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G + +Y A + +A++L+ +A+ FY+ + + AL +
Sbjct: 157 SLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYK 216
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + R + Y GL + L ++ AI
Sbjct: 217 ALKLKYRSNDIYFHIGLSCYALKEYDNAI 245
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ DP Y A G A Q +LE AI+ + +AI+ +P+
Sbjct: 135 GLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPN 194
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA+E PN A + G+ K ++ A+
Sbjct: 195 YSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYK 254
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
++++ + Y +GLAL G+Y +A AH KA+++D N + A +L +
Sbjct: 255 KAIEINPNDAFGYNNMGLALDDQGKYDEAIAAHKKALEIDPNLVLAQNNLKE 306
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S++ +G NEG+Y A SI+ QI+ D A G A Q +LE A + +
Sbjct: 25 SIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYK 84
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P+ A+ G A G+ EAI KA+E +PN A + G+
Sbjct: 85 KAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKL 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ ++LD +AY +G AL+ G+ ++A A+ KAI+LD N+ A+ ++
Sbjct: 145 EEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGV 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++A+ ++ + I+ ++ AY+ G+ L G++ +AI
Sbjct: 205 ALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAI 250
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +GK A + + + ++ DP Y A G A Q +LE AI+ + +AI+ +P+
Sbjct: 67 GLALRKQGKLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPN 126
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA+E +PN A + G + A+
Sbjct: 127 DAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYK 186
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD AY +G+AL G+Y +A A+ KAI+++ N+ A+ ++ +
Sbjct: 187 KAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKY 246
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ ++ + I+ + Y+ GL L G++ +AI
Sbjct: 247 DEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEAI 284
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D S G A +GK AI+ + + ++ DP A G A Q +L
Sbjct: 85 KAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKL 144
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + +AI+ +P+ A+ G A G+ EAI KA+E +PN + + G+
Sbjct: 145 EEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGV 204
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K ++ A+ ++++ AY +G+AL G+Y +A A+ KAI+++ N
Sbjct: 205 ALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDA 264
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ ++ D ++A+ ++ L ID
Sbjct: 265 FGYNNMGLALDDQGKYDEAIAAHKKALEID 294
>gi|425442477|ref|ZP_18822720.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9717]
gi|425463421|ref|ZP_18842760.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9809]
gi|389716492|emb|CCH99282.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9717]
gi|389833251|emb|CCI22396.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9809]
Length = 317
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q ++ + A R + ++ A
Sbjct: 42 AQSVHLSYWLRSGIEQLEAGNYQQALQDFNQSIERENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A RG A LG+ +A+ D ++ + +P+ + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAHFHRGLAFYRLGDYPQALTDYNQTIRLKPSYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L ++++ L Q + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|384210214|ref|YP_005595934.1| hypothetical protein Bint_2760 [Brachyspira intermedia PWS/A]
gi|343387864|gb|AEM23354.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 800
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 12/240 (5%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + VD +RG++ N KY AI FD++++ P A RG ++++ + E
Sbjct: 74 INTTHDTLVDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYE 133
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I DF + ++ N EA G LG EAI++ +L + D + RG
Sbjct: 134 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHS 193
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D + ++L ++ +Y GL +G Y+ A KAI+LD N+
Sbjct: 194 KRYLNMYEEALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSN 253
Query: 553 AW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ L + + + + +KALE + Y+ GLL + LG +K+AI
Sbjct: 254 AYYFRGLTKNSLELYKEAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKEAI 308
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y AI+ + +I++ D +Y + R A E A++D++ AI+ NP
Sbjct: 295 GLLEYKLGNYKEAINYYTKIIEINDDIYY-SYYNRALAEESLELYEDALADYSRAIELNP 353
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 413
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E+ Y Y GL S + E +A + KAI+LD ++ A+ + +
Sbjct: 414 DKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTD 473
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIK 606
+ A++ ++V+ +D A YHL L L +++ A+K
Sbjct: 474 YKSAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALK 513
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E + + +ERG+++
Sbjct: 409 AIEDFDKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIH 468
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
++ D+ +A++D ++LD E+ A +L L+ ++ EY+
Sbjct: 469 YRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDP 528
Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+A E K I++D ++A+ ++ Y L +KA++C +V+
Sbjct: 529 YYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIE 588
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
DK AY+ RGL L + +A +D
Sbjct: 589 ADKSSIDAYYNRGLSKVELKLYNEAFED 616
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ + A+ ++ ++ D Y A RG + ++AI DF +
Sbjct: 425 EFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFKKV 484
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + A + AL E A++ S+ +E +P + D + R + + + +N
Sbjct: 485 IELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNE 544
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
A+ED +++D AY +G+ S+ E++KA + + K I+ D++ ++A+ + L++
Sbjct: 545 AIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSK 604
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
L N +A E + L ID +++ AY+ G
Sbjct: 605 VELKLYN--EAFEDYIRALEIDPKYANAYNGIGF 636
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 74/294 (25%)
Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ Y A+S F+++ L++D ++ +G F E AI+DF +AI+
Sbjct: 190 RGHSKRYLNMYEEALSDFNKVIQLRDDD--SDSYYSKGLTEFFLGLYEDAINDFDKAIEL 247
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNAA 502
+ + A+ RG + +L EA+ D KALE+ E N I ++ G++ +K ++ A
Sbjct: 248 DGNYSNAYYFRGLTKNSLELYKEAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKEA 307
Query: 503 VE----------------------------------DLSACVKLDKENKSAYTYLGLALS 528
+ D S ++L+ E+ +Y GL +
Sbjct: 308 INYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNRGLIKN 367
Query: 529 SIGEYKKAEEAHLKAIQLDRN---------FLEAWGHLTQ-------------------- 559
+ Y +A E + KAI+L++N L+ HL +
Sbjct: 368 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSEDAEFY 427
Query: 560 FYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+Y+ L NS ++AL+ + + + +D ++ AY+ RGL+ + +K AIKD
Sbjct: 428 YYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDF 481
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 3/247 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N K + +K I+ D S R +A+ + Y A++ + + ++ +P + R
Sbjct: 303 NYKEAINYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNR 362
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + + A+ D+ +AI+ + + R + + EAI+D KA+
Sbjct: 363 GLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSE 422
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ + RG+ N + + A++ ++ ++LD + +AY GL +YK A +
Sbjct: 423 DAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFK 482
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K I+LD + A HL Y L E AL+ +V+ +D Y+ R L + +
Sbjct: 483 KVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELY 542
Query: 602 KKAIKDL 608
+AI+D
Sbjct: 543 NEAIEDF 549
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 116/272 (42%), Gaps = 30/272 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F ++++ D A + E E A+ ++ I+ +P
Sbjct: 464 RGLIHYRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDP 523
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + R A + EAI+D K +E + D GI K+ A++
Sbjct: 524 TTPDPYYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCY 583
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL----TQFYQ 562
+ ++ DK + AY GL+ + Y +A E +++A+++D + A+ + T++
Sbjct: 584 TKVIEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKYSN 643
Query: 563 DL---ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ N+++A++ L L Y+ +GL L K +L++ S + +
Sbjct: 644 NEFKNGNTQRAIDLLNDAL--------LYYEKGLSL-------KINDNLNNAS--IYDSM 686
Query: 620 IWNLTRWRNLCF------NAWPFIRRRLLCTR 645
+ T+ N+ NA+ + LLC R
Sbjct: 687 GYTTTKLANIYLSMKDMDNAYKYYNNALLCFR 718
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ ++ L+ + E Y +A+ + ++++ DP P+ R A AI
Sbjct: 489 NESVYANYHLALSYDALEE--YETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNEAI 546
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF + I+ + + +A+ G +L E +AI +K +E + +S D + RG+ +
Sbjct: 547 EDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVE 606
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
K +N A ED +++D + +AY +G +
Sbjct: 607 LKLYNEAFEDYIRALEIDPKYANAYNGIGFS 637
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ + RG + L + EAI+D K +E P+ ++ + RG + ++D
Sbjct: 83 DVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKKV 142
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLAN 566
++ ++++ A Y+GL +G Y++A + ++ LD +A+ GH ++ L
Sbjct: 143 LEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRY---LNM 199
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL +V+ + S +Y+ +GL LG ++ AI D
Sbjct: 200 YEEALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDF 241
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 330 KSSISDNK-----SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
KS+I D K ++S + L+ +D L+E K +R+ + + D
Sbjct: 475 KSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALK-----YYSRVIELDPTTPDPY 529
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R +A++ Y AI F ++++ D +A G +E + AI +T+ I++
Sbjct: 530 YNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEA 589
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ S+ +A+ RG ++ L EA +D +ALE +P A+ + G K+
Sbjct: 590 DKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKY 641
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
D+ + RG+ F K + A++D ++L + +AY G + S +G+Y++ + K
Sbjct: 82 VDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKK 141
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++ + + EA ++ Y L E+A++ L +D AY+ RG L ++
Sbjct: 142 VLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRYLNMYE 201
Query: 603 KAIKDLS 609
+A+ D +
Sbjct: 202 EALSDFN 208
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LG+ EE + ++K
Sbjct: 87 NRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKK 141
>gi|282165353|ref|YP_003357738.1| hypothetical protein MCP_2683 [Methanocella paludicola SANAE]
gi|282157667|dbj|BAI62755.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 358
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS+ +R +A++ E + A+S D+ L+ +PM + G+ + L+ A+
Sbjct: 110 KSVQAWHSCARSLARIGESE--EALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALE 167
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ AI P AW RG+ + G+ EA++ +++ P+ A + +G++ K
Sbjct: 168 SYDRAIFIEPDNAAAWMGRGEVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIKG 227
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
++ A+ L V++ + A+ Y G L G ++A + + K +L AW
Sbjct: 228 GKYDDALAMLDKAVEMRDGHADAWFYRGCVLELSGRIREALDCYRKVTELQPGSQAAWFM 287
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L E+A+ C + L I+ RF++A++ +GL LG +++A +
Sbjct: 288 RGVLLGRLEAYEEAMPCFDKALEINPRFAEAWYHKGLFASILGNNEEAAR 337
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + + +S D G Q + G A+ +D+ + +P A +GRG + +
Sbjct: 134 CMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRGEVLSKE 193
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +I+ +P AW +G G+ +A+ L KA+E AD
Sbjct: 194 GKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDKAVEMRDGHADAWFY 253
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG V A++ +L +++A+ G+ L + Y++A KA++++
Sbjct: 254 RGCVLELSGRIREALDCYRKVTELQPGSQAAWFMRGVLLGRLEAYEEAMPCFDKALEINP 313
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
F EAW H F L N+E+A C+ + + I+ F
Sbjct: 314 RFAEAWYHKGLFASILGNNEEAARCITRTIEINPDF 349
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 34/261 (13%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + L +G+ G+ A +I +FD + D Y +A +G + + A S F
Sbjct: 8 IEAEAALEKGLEMAGAGRMADSIVLFDHAIGLDRDYGDAYNCKGLVLTELKRFDQAFSCF 67
Query: 439 TEA----------------------------------IQSNPSAGEAWKRRGQARAALGE 464
A ++ +P + +AW ++ A +GE
Sbjct: 68 ERALTLQPQNPKFWYNKSILFRELGMYEDEAGACLMSLKFDPKSVQAWHSCARSLARIGE 127
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S EA+ + KALE EP SAD+ G + + A+E + ++ +N +A+ G
Sbjct: 128 SEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRG 187
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
LS G+ +A E + ++I++ + AW + + AL L + + +
Sbjct: 188 EVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDKAVEMRDGH 247
Query: 585 SKAYHLRGLLLHGLGQHKKAI 605
+ A+ RG +L G+ ++A+
Sbjct: 248 ADAWFYRGCVLELSGRIREAL 268
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA + +G A + +I F AI + G+A+ +G L +A +A
Sbjct: 11 EAALEKGLEMAGAGRMADSIVLFDHAIGLDRDYGDAYNCKGLVLTELKRFDQAFSCFERA 70
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV---KLDKENKSAYTYLGLALSSIGE 532
L +P + + + I+ F++ ++ AC+ K D ++ A+ +L+ IGE
Sbjct: 71 LTLQPQNPKFWYNKSIL---FRELGMYEDEAGACLMSLKFDPKSVQAWHSCARSLARIGE 127
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
++A KA++L+ + W +L + L +KALE + ++I+ + A+ RG
Sbjct: 128 SEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRG 187
Query: 593 LLLHGLGQHKKAIK 606
+L G+ +A++
Sbjct: 188 EVLSKEGKEAEALE 201
>gi|166364042|ref|YP_001656315.1| hypothetical protein MAE_13010 [Microcystis aeruginosa NIES-843]
gi|166086415|dbj|BAG01123.1| periplasmic protein [Microcystis aeruginosa NIES-843]
Length = 295
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q ++ + A R + ++ A
Sbjct: 20 AQSVHLSYWLRSGIEQLEAGNYQQALQDFNQSIERENNLALAYSNRCLTEIYLQDYLHAW 79
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A RG A LG+ +A+ D ++ + +P+ + RG+V
Sbjct: 80 QDCTRSLQQQSDNYLAHFHRGLAFYRLGDYPQALTDYNQTIRLKPSYYQAYYNRGLVQAA 139
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 140 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 199
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L ++++ L Q + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 200 ASAYYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 259
Query: 611 GSRTM 615
G+ +
Sbjct: 260 GANHL 264
>gi|333986764|ref|YP_004519371.1| hypothetical protein MSWAN_0532 [Methanobacterium sp. SWAN-1]
gi|333824908|gb|AEG17570.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 529
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 116/229 (50%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++ VD +GI GKY +AI FD+ LK DP + + RG + E A+
Sbjct: 271 NLHVDILYRKGIILTELGKYKAAIGPFDKALKIDPNFVDVWTARGMVSLMLNKSEEALGY 330
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +A++ +P A+ + A L + E+++ L K LE E A + RGI+ +
Sbjct: 331 YDKALKVDPQNFGAFMGKYMALMDLDKHQESLEYLDKVLEIESQQASLWASRGILLNQLG 390
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ L+ +KLD++ A+ G +L + ++A ++ +A++LD +AW
Sbjct: 391 RYEEAIICLNKALKLDQKEPRAWKTKGKSLVRLKRPEEALKSLEEALKLDPKNSDAWFTK 450
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ LA +++L C ++ L ++ + A++ +GL L L + +KA+K
Sbjct: 451 GLAFNQLAKFKESLNCFEKSLNLNPDNADAWYGKGLSLEELEKPEKALK 499
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ +A+ ++ L+ DP Y A +G A + E + AI+ +P G W +G
Sbjct: 183 FNNALEFANEALELDPNYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGLPWYGKG 242
Query: 457 QARAALGESVEAIQDLSKALE-----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
LG+ EAI +KAL+ F+ DIL+ +GI+ + + AA+ +K
Sbjct: 243 LVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGIILTELGKYKAAIGPFDKALK 302
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKA 570
+D +T G+ + + ++A + KA+++D +NF G DL +++
Sbjct: 303 IDPNFVDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMAL-MDLDKHQES 361
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LE L +VL I+ + + + RG+LL+ LG++++AI
Sbjct: 362 LEYLDKVLEIESQQASLWASRGILLNQLGRYEEAI 396
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +RG+ + K A+ +D+ LK DP A +G+ A + + ++ +
Sbjct: 308 VDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMALMDLDKHQESLEYLDK 367
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ W RG LG EAI L+KAL+ + +G + K
Sbjct: 368 VLEIESQQASLWASRGILLNQLGRYEEAIICLNKALKLDQKEPRAWKTKGKSLVRLKRPE 427
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ L +KLD +N A+ GLA + + ++K++ K++ L+ + +AW
Sbjct: 428 EALKSLEEALKLDPKNSDAWFTKGLAFNQLAKFKESLNCFEKSLNLNPDNADAWYGKGLS 487
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKA 587
++L EKAL+ + L + F A
Sbjct: 488 LEELEKPEKALKSYDKALELKIDFKPA 514
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + K + D ++ DP G+G + E AI + +A++
Sbjct: 207 KGGALIGMAKPEEGLKCLDNAIELDPELGLPWYGKGLVSQKLGKYEEAIDYYNKALKLGL 266
Query: 447 SAGE-----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ R+G LG+ AI KAL+ +PN D+ RG+V+
Sbjct: 267 KNFDNLHVDILYRKGIILTELGKYKAAIGPFDKALKIDPNFVDVWTARGMVSLMLNKSEE 326
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +K+D +N A+ +AL + +++++ E K ++++ W
Sbjct: 327 ALGYYDKALKVDPQNFGAFMGKYMALMDLDKHQESLEYLDKVLEIESQQASLWASRGILL 386
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L E+A+ CL + L +D++ +A+ +G L L + ++A+K L
Sbjct: 387 NQLGRYEEAIICLNKALKLDQKEPRAWKTKGKSLVRLKRPEEALKSL 433
>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 371
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ +G+Y I+ +D+ L +P + +A RG A F E + + AI
Sbjct: 75 FEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITL 134
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ G+ W R A LG+ AI A E P A+ + RGI+ F +
Sbjct: 135 QPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIA 194
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +D + + G++L +G ++ E++ KA++ D +AW + + L
Sbjct: 195 SYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLL 254
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EK +E +L ++ + ++ RG+ L LGQ +AI
Sbjct: 255 GEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAI 295
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ K+ +I+ +F RG+A +Y + +D+ + P + R A
Sbjct: 91 IASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITLQPNNGDTWFNRAVALE 150
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+++AAI+ + A ++NP EAW RG LG E I K+L +P S D
Sbjct: 151 NLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASYDKSLSIDPTSTDTW 210
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ +E ++ D EN+ A+ G+A +GE++K E++ + L
Sbjct: 211 YNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGEFEKEIESYDILLAL 270
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ + W + DL +A+ ++ + +D +
Sbjct: 271 NPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQ 307
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A +G Q E I+ + +A+ NP +AW RG A L + + +A+
Sbjct: 73 AWFEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAI 132
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+PN+ D R + +AA+ A + + E+ A+ G+ L +G +++
Sbjct: 133 TLQPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEE 192
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ K++ +D + W + DL E+ +E + L D A++ RG+
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 597 GLGQHKKAIK 606
LG+ +K I+
Sbjct: 253 LLGEFEKEIE 262
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 370 VTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ KS SI S D +RG++ + G+ I +D+ L++DP +A RG A
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
E E I + + NP + W RG + + LG+ EAI +A+ +P +
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVF 312
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ + + + +AA++ L ++L+ N+S
Sbjct: 313 YNIAVSQVRLGEIDAALDSLEKAIELNPANRS 344
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G++ I+ +D+ L DP + RG + LE I + +A++ +
Sbjct: 178 NRGILLGGLGRFEEEIASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQD 237
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LGE + I+ L P AD + RGI + A+
Sbjct: 238 PENQDAWYNRGVAFGLLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVS 297
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFY 561
++LD + + + ++ +GE A ++ KAI+L +R+F E T+ +
Sbjct: 298 YREAIRLDPQRDIVFYNIAVSQVRLGEIDAALDSLEKAIELNPANRSFAETDVEFTELF 356
>gi|434385766|ref|YP_007096377.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428016756|gb|AFY92850.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 261
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 10/242 (4%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISD 437
I+ D ++ G Q G A++ +D+ + P Y A RG+ + A+ R+++ AI+D
Sbjct: 13 IASDDYIALGNRQSQIGNKRGALAAYDRAVCLAPNYARAYNYRGSFKFAYCRDIQGAIAD 72
Query: 438 FTEAIQSNPSAGEAWKRRGQAR-AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F AI +P+ A+ RG R LG+ A+ DL+ A+ P A + RG++ ++
Sbjct: 73 FDSAIGYDPNYAVAYANRGLVRYQQLGDIPGALADLNVAILLNPRDASVYTTRGLIKYEL 132
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALS-SIGEYKKAEEAHLKAIQLDRNFLEA-W 554
D A D + +D +AY GL + + + A + KAI LD EA +
Sbjct: 133 GDIEYAFADYDLAISIDPTFAAAYNCRGLLKNVKLMDIDGALADYDKAIALDPLLSEAFY 192
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRT 614
T +++L +S AL + + + R + AY +RGLL + + DL SR
Sbjct: 193 NRGTLKHKELGDSVGALADYDKAILLAPRLAAAYLVRGLL------KRDKLDDLLGASRD 246
Query: 615 MM 616
M
Sbjct: 247 FM 248
>gi|124004030|ref|ZP_01688877.1| TPR repeat [Microscilla marina ATCC 23134]
gi|123990609|gb|EAY30089.1| TPR repeat [Microscilla marina ATCC 23134]
Length = 603
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E G + + + + A++D+ AI + + R A+ LG +E++QD A
Sbjct: 25 EEYFDSGNQKLMKEDYDGAVNDYNNAIAQKTNVAAFFANRAIAKYRLGRYLESVQDCDIA 84
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE-----NKSAYTYL------- 523
L EPN + + + RG+ NF K + AV D + L+ N A+TYL
Sbjct: 85 LRLEPNQSKVYNNRGLANFGLKRYKEAVSDYTKATALEPTFAKAYNNRAFTYLTMRVFQS 144
Query: 524 ----------------------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
G A + + + +AE+ + KAI +D + A+ +
Sbjct: 145 AIDDYDKSIGLKMADAASYNNRGWAKAKLKRFTEAEQDYNKAIAMDPEYAMAYNNRGYVR 204
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L + ++ + + ++ RFS AY RG+ + G ++A KD +S R
Sbjct: 205 AKLGDYTNSVRDYSKSIILNPRFSDAYLWRGITHYRFGNQEQACKDWTSALR 256
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +Y A+S + + +P + +A R R ++AI D+ ++I
Sbjct: 97 NRGLANFGLKRYKEAVSDYTKATALEPTFAKAYNNRAFTYLTMRVFQSAIDDYDKSIGLK 156
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ ++ RG A+A L EA QD +KA+ +P A + RG V K D+ +V D
Sbjct: 157 MADAASYNNRGWAKAKLKRFTEAEQDYNKAIAMDPEYAMAYNNRGYVRAKLGDYTNSVRD 216
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--------GHL 557
S + L+ AY + G+ G ++A + A++L + W G
Sbjct: 217 YSKSIILNPRFSDAYLWRGITHYRFGNQEQACKDWTSALRLKNQKAQRWLDDFCTGDGPA 276
Query: 558 TQFYQDLANSEKAL--ECLQQVL-------YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ +KAL E Q+ + ++ AY RG G +AI D
Sbjct: 277 KTADEYFADGDKALLNEKWQEAISAYTKCVHLKSDHYMAYGHRGRANRKAGNLDQAIADF 336
Query: 609 SSGSRTMMPHLIW 621
S + + P W
Sbjct: 337 SKAIK-INPEYDW 348
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 22/237 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G AI+ F + +K +P Y A RG A+ ++ A+ DF +AI P
Sbjct: 319 RGRANRKAGNLDQAIADFSKAIKINPEYDWAYASRGYAKVVAKKYTEALLDFDKAIALKP 378
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A+ R + + LG AI+D + AL+ +PN R + ++ D DL
Sbjct: 379 SYRWAYAHRARTKYYLGRYKNAIEDYNNALKIDPNDGWSYRNRALARYELGDAVGTCADL 438
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEA-HLKAIQLDRNFLEAW----GHLTQFY 561
+L Y GL I EY K + + + RN+ QFY
Sbjct: 439 KKAKEL-----GDYKAEGL----IQEYCKTRGSNNQRTTDTTRNYNTGLSSSNAEAIQFY 489
Query: 562 QDLANSE-------KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L N A+ Q ++ D RF +AY RG L ++ AIKD +
Sbjct: 490 K-LGNERLDNEAFYDAITRYTQAIWADARFKEAYMDRGHAKIRLKDYRSAIKDFDNA 545
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ SK+ I+ ++ SRG A+V KY A+ FD+ + P Y A R +
Sbjct: 332 AIADFSKAIKINPEYDWAYASRGYAKVVAKKYTEALLDFDKAIALKPSYRWAYAHRARTK 391
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI D+ A++ +P+ G +++ R AR LG++V DL KA E A+
Sbjct: 392 YYLGRYKNAIEDYNNALKIDPNDGWSYRNRALARYELGDAVGTCADLKKAKELGDYKAEG 451
Query: 486 LHE-----RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE--YKKAEE 538
L + RG N + D + L N A + L + + A
Sbjct: 452 LIQEYCKTRGSNNQRTTD-----TTRNYNTGLSSSNAEAIQFYKLGNERLDNEAFYDAIT 506
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ +AI D F EA+ L + A++ L +D +S+AY+LRG
Sbjct: 507 RYTQAIWADARFKEAYMDRGHAKIRLKDYRSAIKDFDNALLLDINYSEAYYLRG 560
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 107/267 (40%), Gaps = 26/267 (9%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+F +K+I++D + RG + G Y +++ + + + +P + +A +
Sbjct: 174 KRFTEAEQDYNKAIAMDPEYAMAYNNRGYVRAKLGDYTNSVRDYSKSIILNPRFSDAYLW 233
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAW-----KRRGQARAA-----------LGE 464
RG E A D+T A++ + W G A+ A L E
Sbjct: 234 RGITHYRFGNQEQACKDWTSALRLKNQKAQRWLDDFCTGDGPAKTADEYFADGDKALLNE 293
Query: 465 SV-EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EAI +K + + + RG N K + + A+ D S +K++ E AY
Sbjct: 294 KWQEAISAYTKCVHLKSDHYMAYGHRGRANRKAGNLDQAIADFSKAIKINPEYDWAYASR 353
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYID 581
G A +Y +A KAI L ++ A+ H T++Y L + A+E L ID
Sbjct: 354 GYAKVVAKKYTEALLDFDKAIALKPSYRWAYAHRARTKYY--LGRYKNAIEDYNNALKID 411
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+Y R L + LG DL
Sbjct: 412 PNDGWSYRNRALARYELGDAVGTCADL 438
>gi|406884144|gb|EKD31608.1| hypothetical protein ACD_77C00293G0006 [uncultured bacterium]
Length = 337
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-----YASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D R E + Y AIS + + + P A I RG ++ ++
Sbjct: 147 TKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKD 206
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A +D+T+A+ S+P W RG + AL + AI D +KALE PN + RG
Sbjct: 207 FAGAQADYTKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRG 266
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F KD A+ D + + +D N AY G+A + G+ A E KA +L
Sbjct: 267 LSKFSLKDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACEDWKKAGELGEK- 325
Query: 551 LEAWGHLTQF 560
EA+ + +F
Sbjct: 326 -EAFALIKEF 334
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 4/213 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ + + ++ P EAL RG A+ R+ AI D+ AIQ + + +AW RG
Sbjct: 71 YNGALDDYTKSIELKPEDAEALFYRGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRG 130
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ L EAI DL+KA++ +P + + + R D+ A+ D S + + +
Sbjct: 131 SMKIKLRYYEEAIFDLTKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPND 190
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
A+ GL S++ ++ A+ + KA+ D + L W + +T+F L + + A+
Sbjct: 191 VYAFINRGLCKSNLKDFAGAQADYTKAVDSDPDLLSGWYNRGVTKF--ALEDYDGAIADF 248
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ L + + AY+ RGL L AI D
Sbjct: 249 TKALEMSPNLTAAYNNRGLSKFSLKDLTGAISD 281
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ KY AI + + ++ D +A RG+ + R E AI D T+AI +P
Sbjct: 95 RGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRGSMKIKLRYYEEAIFDLTKAIDLDP 154
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ R +AR + AI D S+ ++ PN RG+ KDF A D
Sbjct: 155 RNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKDFAGAQADY 214
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
+ V D + S + G+ ++ +Y A KA+++ N A+ + L++F L
Sbjct: 215 TKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRGLSKF--SL 272
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + L ID SKAY RG+ G A +D
Sbjct: 273 KDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACED 315
>gi|365890554|ref|ZP_09429068.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365333560|emb|CCE01599.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 453
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG Q L+ A++D+ +AI
Sbjct: 100 YRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVVYTEQHRLDRALADYDQAI 159
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A+QD +A+ +P+ R K + A
Sbjct: 160 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPRTFTNRAAAYKKLGQIDKA 219
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D ++ D + + GL +++ EY KA + +AI+L NFL G QF
Sbjct: 220 LADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAIKLQPKPNFLTNRGDSYQF 279
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+L + AL L +D F+ AY+ R +L +G+ KA+ D + R
Sbjct: 280 KGELGS---ALSDYDAALRLDPDFALAYNNRAVLFRKMGERAKALADYEAALR 329
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ D AI + A++ RG R A G++ +A DLS A+ +PN A+ RG+V
Sbjct: 82 ALKDVDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVV 141
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ D ++L + AY G+A G+ +KA + + +AI+LD +
Sbjct: 142 YTEQHRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPR 201
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + Y+ L +KAL + + D + + + RGL + ++ KAI D
Sbjct: 202 TFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAI 261
Query: 613 RTMM-PHLIWN 622
+ P+ + N
Sbjct: 262 KLQPKPNFLTN 272
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y AI+ +DQ +K P P L RG + F+ EL +A+SD+ A++ +
Sbjct: 239 NRGLTYAAMKEYDKAIADYDQAIKLQPK-PNFLTNRGDSYQFKGELGSALSDYDAALRLD 297
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P A+ R +GE +A+ D AL +P + + R + + K F A
Sbjct: 298 PDFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAAGRRAMLAEIKKFGA 353
>gi|327399475|ref|YP_004340344.1| hypothetical protein Hipma_1328 [Hippea maritima DSM 10411]
gi|327182104|gb|AEA34285.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
DSM 10411]
Length = 260
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L +G Q E E AI F A++ NPS +A+ G A L +A +KA
Sbjct: 6 DVLFHKGELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKA 65
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLS-ACVKLDKENKSAYTYLGLALSSIGEYK 534
+E PN+ + + ++ KF F +E L+ ++LD+ + S Y +G A +GE
Sbjct: 66 IEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLNIGNAYYELGEND 125
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A E + AI ++ +F EA+ ++ Y KA E +Q L ID S Y G++
Sbjct: 126 RAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLGIV 185
Query: 595 LHGLGQHKKAIKDLSSGSRT 614
LG + +A+K R
Sbjct: 186 YGELGSYDEAVKYFEQSIRI 205
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +G V +G+ AI F +KE+P + +A I G A + A +A
Sbjct: 6 DVLFHKGELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKA 65
Query: 442 IQSNPSAGEAWKRRGQARAALG---ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
I+ NP+ EA+ G + +EA+ ++ L+ EP+ A I G ++ +
Sbjct: 66 IEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLD-EPD-ASIYLNIGNAYYELGE 123
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E + ++ + AY +G A + EY KA EA+ +A+Q+D N + + +L
Sbjct: 124 NDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLG 183
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y +L + ++A++ +Q + I+ A++ G++ L + +KA+ +
Sbjct: 184 IVYGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNEKEKALNE 232
>gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
Length = 489
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 101/203 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI +G+ A++ F++ ++ +P + A + RG + +R+ AI+D+TE I+ +P
Sbjct: 197 RGIGWREKGELDKALNDFNECIRLEPDFTSAYLSRGNVLSDRRQFAKAIADYTEVIRRSP 256
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A E +A++DL +++ P RG + + + A+ +
Sbjct: 257 QSSLAYCNRGHAYNDTKEYDKALKDLDESIRLNPRYVPAHLTRGKAWYGKGEHDKAIANY 316
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD S Y + GLA ++ GE+ KA + A++LD + A L +
Sbjct: 317 TEALRLDPRYISPYLHRGLAWAAKGEHDKAIADYSAAVRLDPKSIYAHQQLAAGWAAKKE 376
Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
+ AL + + ++ R + A+H
Sbjct: 377 YKNALRGFETLAELNPRHAYAFH 399
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG + ++A AI+ + ++++ P A RG A +E + A+ D E+I+
Sbjct: 229 LSRGNVLSDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRL 288
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A RG+A GE +AI + ++AL +P RG+ + + A+
Sbjct: 289 NPRYVPAHLTRGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKAIA 348
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D SA V+LD ++ A+ L ++ EYK A
Sbjct: 349 DYSAAVRLDPKSIYAHQQLAAGWAAKKEYKNA 380
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A + +D+ LK DP AL RG + EL+ A++DF E I+ P A+ RG
Sbjct: 176 APAHWDRELKADPENTHALYMRGIGWREKGELDKALNDFNECIRLEPDFTSAYLSRGNVL 235
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ + +AI D ++ + P S+ RG K+++ A++DL ++L+ A
Sbjct: 236 SDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLNPRYVPA 295
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G A GE+ KA +AN +AL
Sbjct: 296 HLTRGKAWYGKGEHDKA---------------------------IANYTEALR------- 321
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+D R+ Y RGL G+H KAI D S+ R
Sbjct: 322 LDPRYISPYLHRGLAWAAKGEHDKAIADYSAAVR 355
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA + L+ +P + L+ RGI + + + A+ D + C++L+ + SAY G
Sbjct: 175 EAPAHWDRELKADPENTHALYMRGIGWREKGELDKALNDFNECIRLEPDFTSAYLSRGNV 234
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
LS ++ KA + + I+ A+ + Y D +KAL+ L + + ++ R+
Sbjct: 235 LSDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLNPRYVP 294
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSG----SRTMMPHL 619
A+ RG +G G+H KAI + + R + P+L
Sbjct: 295 AHLTRGKAWYGKGEHDKAIANYTEALRLDPRYISPYL 331
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V L+RG A +G++ AI+ + + L+ DP Y + RG A A + E + AI+D++
Sbjct: 293 VPAHLTRGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKAIADYSA 352
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFK 495
A++ +P + A ++ AA E A++ E P A H+ + +
Sbjct: 353 AVRLDPKSIYAHQQLAAGWAAKKEYKNALRGFETLAELNPRHAYAFHQIAWLCATCPDPA 412
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+D A+E + LDK N T L A + GE+ +A LK ++
Sbjct: 413 VRDGKKAIEAAKKAMSLDKLNDYGDT-LAAAYAEAGEFDQAVSVLLKTLE 461
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ-DICNRA 76
K + + +E +R++ SA +R + L R ++KAI ++ +S + CNR
Sbjct: 209 KALNDFNECIRLEPDFTSAYLSRGNV--LSDRRQFAKAIADYTEVIRRSPQSSLAYCNRG 266
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
Y+ + + ++D D++++L+P + A++ +G A+ G ++A++
Sbjct: 267 HAYNDTKEYDKALKDLDESIRLNPRYVPAHLTRGKAWYGKGEHDKAIA 314
>gi|291569425|dbj|BAI91697.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 275
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ ++S+D L R + G++ A S + +I+ P P RG R Q L
Sbjct: 37 VAEISTLSLDELLERAFSTSQAGRFPEAESYWTEIINRYPDNPAMWSNRGNVRVSQNRLT 96
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+ AI+ P+A +A+ RG A LG +AI D ++ LE P+ A + RG
Sbjct: 97 EAIGDYNRAIELAPTAADAYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNA 156
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
K++ AA+ D +LD A LAL GE K+A
Sbjct: 157 EAGQKNWEAAIADYFQAAELDPNYAFARANYALALYESGETKEA 200
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S +TE I P W RG R + EAI D ++A+E P +AD RG+
Sbjct: 66 SYWTEIINRYPDNPAMWSNRGNVRVSQNRLTEAIGDYNRAIELAPTAADAYLNRGVAYEG 125
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ A+ D + ++L + AY G A + ++ A + +A +LD N+
Sbjct: 126 LGRWSDAIADYNRTLELSPSDAIAYNNRGNAEAGQKNWEAAIADYFQAAELDPNY 180
>gi|434395410|ref|YP_007130357.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267251|gb|AFZ33197.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 1022
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +G+A +Y SAI+ FD++L+ P + RG A + E A + F++
Sbjct: 761 DLCYQQGLALWELKQYESAIAAFDKVLEIKPDDAASWYHRGLALKELKRYEGAFAAFSQV 820
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P +AW RG + + +AI KA+E PN +RG+ K ++
Sbjct: 821 IQVQPENSDAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEE 880
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A + V++ ++ A+ +AL + + + A ++ KAI+LD ++ +AW
Sbjct: 881 AFQSFDRAVQVKPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLL 940
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L +ALE + L I + AY+ + + GQ K A+++L
Sbjct: 941 VQLERDPEALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKA 990
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 112/225 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +++G A EG+Y AI+ ++Q L+ P P+ +G A ++ E+AI+ F +
Sbjct: 727 DDYINQGNALFAEGRYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYESAIAAFDKV 786
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P +W RG A L A S+ ++ +P ++D RGIV + K +
Sbjct: 787 LEIKPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKD 846
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++++ + A+ G+AL + +++A ++ +A+Q+ + AW +
Sbjct: 847 AIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQVKPDDAVAWMNRAMAL 906
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ L E A+ + + +D + KA++ +G LL L + +A++
Sbjct: 907 EVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPEALE 951
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M P+ I +G A + + AI+ + +A++ P+ + ++G A L + AI
Sbjct: 724 MRPDDYINQGNALFAEGRYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYESAIAAF 783
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
K LE +P+ A + RG+ + K + A S +++ EN A+ G+ LS +
Sbjct: 784 DKVLEIKPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKR 843
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
YK A ++ KAI+++ N AW L N E+A + + + + + A+ R
Sbjct: 844 YKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQVKPDDAVAWMNRA 903
Query: 593 LLLHGLGQHKKAI 605
+ L L + + AI
Sbjct: 904 MALEVLEKLEDAI 916
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI +Y AI+ +D+ ++ +P + A + RG A + E A F A+Q
Sbjct: 832 FNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQV 891
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW R A L + +AI KA+E +P+ + +G + + + A+E
Sbjct: 892 KPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPEALE 951
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+++ + +AY + + G+ K A E KAI+L+ +
Sbjct: 952 SFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNPKY 997
>gi|406829982|ref|ZP_11089576.1| hypothetical protein SpalD1_00040 [Schlesneria paludicola DSM
18645]
Length = 715
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
GRGTA + RE E A+++F +++ +PS + RG A LG +A+ ++KA++
Sbjct: 491 FGRGTAYSRLREFENALAEFDLSLKLDPSLVNGYFYRGMVLAQLGRDDDALMSIAKAIDL 550
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP + + L G + K K + AAV DLS +++D N Y G L +G Y+ A
Sbjct: 551 EP-APEHLFICGEILSKRKQYTAAVADLSKAIQIDASNPYFYQSRGHCLRELGHYQHALS 609
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
KAIQL NF +A + + A+E + + + + F++ Y R +
Sbjct: 610 DLSKAIQLQPNFAKALYERGLTFAAIDRHANAIEDFSKAISLSQEFAEVYLHRAKSFIRV 669
Query: 599 GQHKKAIKDL 608
G+ +A DL
Sbjct: 670 GKVAQARGDL 679
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ A+ + + +P PE L G + +++ AA++D ++AIQ +
Sbjct: 527 RGMVLAQLGRDDDALMSIAKAIDLEPA-PEHLFICGEILSKRKQYTAAVADLSKAIQIDA 585
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S ++ RG LG A+ DLSKA++ +PN A L+ERG+ A+ED
Sbjct: 586 SNPYFYQSRGHCLRELGHYQHALSDLSKAIQLQPNFAKALYERGLTFAAIDRHANAIEDF 645
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
S + L +E Y + + +G+ +A
Sbjct: 646 SKAISLSQEFAEVYLHRAKSFIRVGKVAQA 675
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 57 RILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSAL 116
R++D LA S+ R YS+L ++ + + D +L+LDP+L+ Y +G + L
Sbjct: 480 RLMDIQLASSH-----FGRGTAYSRLREFENALAEFDLSLKLDPSLVNGYFYRGMVLAQL 534
Query: 117 GRKEEALSVWEKG--YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
GR ++AL K E A + L + TAA D S + D SN
Sbjct: 535 GRDDDALMSIAKAIDLEPAPEHLFICGEILSKRKQYTAAVADLSKAIQIDASN 587
>gi|421144270|ref|ZP_15604186.1| hypothetical protein A447_00290 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395489371|gb|EJG10210.1| hypothetical protein A447_00290 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 165
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++EL I ++++ I+ P+ + RG A L E +AI+D +KA+E EPN+A +
Sbjct: 6 RKELLKEIEEYSKKIKEEPNNDVYYNNRGVAFDNLEEFDKAIEDYNKAIELEPNNASYWN 65
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQL 546
RG V + K++ A+E+ S + L+ E K Y Y G++ ++ EY+K E + KAI+L
Sbjct: 66 SRGDVYYFLKNYETAIENYSQAISLNSE-KGLYFYNHGISYYNLKEYEKTIEDYDKAIEL 124
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ N W Y +L EKA+E + +
Sbjct: 125 EPNNASYWNSRGNTYYNLKEYEKAIEDYNKAI 156
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N ++ AI +++ ++ +P RG F + E AI ++++AI N
Sbjct: 32 NRGVAFDNLEEFDKAIEDYNKAIELEPNNASYWNSRGDVYYFLKNYETAIENYSQAISLN 91
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
G + G + L E + I+D KA+E EPN+A + RG + K++ A+ED
Sbjct: 92 SEKGLYFYNHGISYYNLKEYEKTIEDYDKAIELEPNNASYWNSRGNTYYNLKEYEKAIED 151
Query: 506 LSACVKLDKENKS 518
+ ++L N S
Sbjct: 152 YNKAIELKPNNAS 164
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I + + +KE+P RG A E + AI D+ +AI+ P+ W RG
Sbjct: 13 IEEYSKKIKEEPNNDVYYNNRGVAFDNLEEFDKAIEDYNKAIELEPNNASYWNSRGDVYY 72
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L AI++ S+A+ + GI + K++ +ED ++L+ N S +
Sbjct: 73 FLKNYETAIENYSQAISLNSEKGLYFYNHGISYYNLKEYEKTIEDYDKAIELEPNNASYW 132
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G ++ EY+KA E + KAI+L N
Sbjct: 133 NSRGNTYYNLKEYEKAIEDYNKAIELKPN 161
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E+ S +K + N Y G+A ++ E+ KA E + KAI+L+ N W Y
Sbjct: 13 IEEYSKKIKEEPNNDVYYNNRGVAFDNLEEFDKAIEDYNKAIELEPNNASYWNSRGDVYY 72
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L N E A+E Q + ++ ++ G+ + L +++K I+D
Sbjct: 73 FLKNYETAIENYSQAISLNSEKGLYFYNHGISYYNLKEYEKTIEDY 118
>gi|428211835|ref|YP_007084979.1| hypothetical protein Oscil6304_1348 [Oscillatoria acuminata PCC
6304]
gi|428000216|gb|AFY81059.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 423
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+ + V+ +RG+ ++ G +A++ F+++++ D + A + RG A + E A+S
Sbjct: 218 EPLDVNGWFTRGVERLEAGDDRAALNAFNRVIELDSNHASAWMNRGNALFNLAQAEDALS 277
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI-VNFK 495
+ AI+ P +W RG A L EA+ +K+LE +P++AD+ + +G+ +
Sbjct: 278 AYDRAIELRPDDAFSWGARGDALYDLERIDEALTSWNKSLELKPDNADVWYSKGLALGIN 337
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
++ A+ L + L+ + + Y G+ALSS+ + ++A + K +++ +F +AW
Sbjct: 338 LGQWDEALTSLEQAIALNANDVQFWFYRGIALSSLNQLEEALTSWDKVLEIKPDFRDAWI 397
Query: 556 HLTQFYQDLANSEKALECLQQVL 578
+ Q L +A+E Q +
Sbjct: 398 NKGVVLQKLGRYSEAIEANNQAI 420
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
++P+ RG R + AA++ F I+ + + AW RG A L ++ +A+
Sbjct: 217 DEPLDVNGWFTRGVERLEAGDDRAALNAFNRVIELDSNHASAWMNRGNALFNLAQAEDAL 276
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS- 528
+A+E P+ A RG + + + A+ + ++L +N + GLAL
Sbjct: 277 SAYDRAIELRPDDAFSWGARGDALYDLERIDEALTSWNKSLELKPDNADVWYSKGLALGI 336
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS-----EKALECLQQVLYIDKR 583
++G++ +A + +AI L+ N ++ W FY+ +A S E+AL +VL I
Sbjct: 337 NLGQWDEALTSLEQAIALNANDVQFW-----FYRGIALSSLNQLEEALTSWDKVLEIKPD 391
Query: 584 FSKAYHLRGLLLHGLGQHKKAIK 606
F A+ +G++L LG++ +AI+
Sbjct: 392 FRDAWINKGVVLQKLGRYSEAIE 414
>gi|432330743|ref|YP_007248886.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
gi|432137452|gb|AGB02379.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
Length = 318
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A G++ A+ F + L+ DP + A +GRG A Q E I +AI +
Sbjct: 19 SKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALD 78
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A L E I + L +P +A + +G+ V
Sbjct: 79 PHNVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSC 138
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + SA+ G AL + Y++ + +A+++ FL A + + L
Sbjct: 139 CDRALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLK 198
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+E L + L ID +KA + +GL L +G+H +AI L
Sbjct: 199 EYRDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVL 241
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RG A ++ I +Q L DP A +G A E +S
Sbjct: 81 NVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCD 140
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ P AW +G A L E I +AL+ P L +G+ + K++
Sbjct: 141 RALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEY 200
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E L + +D + A GL LS +G + +A KA+++D +AW L+
Sbjct: 201 RDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVLSN 260
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E++ YID + + ++G+ L G+ A+ S
Sbjct: 261 SCFLTGRLEESARAFDMAYYIDVKDVRTGLVKGMSLLKNGKVDDALHAFS 310
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L+ + + I D +L + + + N+ + L+ ++ I D+AL +DP +
Sbjct: 160 LGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAK 219
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A KG S +GR EA+ V EK E
Sbjct: 220 ALYRKGLTLSLMGRHSEAIPVLEKALE 246
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R K + +++G+A ++ +Y AI D+ L DP + +AL +G +
Sbjct: 172 CYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAKALYRKGLTLSLM 231
Query: 429 RELEAAISDFTEAIQSNPSAGEAW 452
AI +A++ +P+ +AW
Sbjct: 232 GRHSEAIPVLEKALEIDPAIADAW 255
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
KE+ Y GLAL G++K+A EA +A++ D +F AW E+ +EC
Sbjct: 11 KEDCRKYYSKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIEC 70
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +D A++ RG L + ++ I
Sbjct: 71 CEKAIALDPHNVDAWNNRGFACGMLARFEEKI 102
>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 375
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 113/212 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI +++ +K P Y E+ +G + E E +I + +AI+ P + +
Sbjct: 129 GKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNN 188
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + LG+ EAI+ +KA+E PN A +++ +G + + A++ + ++L+
Sbjct: 189 KGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNP 248
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +Y G + +G+Y++A + + KAI+L +++E++ + ++ E+++
Sbjct: 249 NDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAY 308
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ + + + Y+ +G L LG++++AIK
Sbjct: 309 EKAIELKPDDADIYNNKGTSLFNLGEYEEAIK 340
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI +++ +K P +G + AF E AI + ++I NP +A+
Sbjct: 27 GRYEEAIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPEYADAYNN 86
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + L + EA+ + KA+E +PN A + +G +K + A+++ + +KL
Sbjct: 87 KGNSFFDLEKYEEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKP 146
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWG----HLTQFYQ----- 562
+ +Y G++L +IGEY+++ A+ KAI+L D + G +L Q+ +
Sbjct: 147 DYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAY 206
Query: 563 ----------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
DL E+A++C Q + ++ + +Y+ +G + LG+
Sbjct: 207 NKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGK 266
Query: 601 HKKAIKDLSSGSRTMMPHLI 620
+++AIK+ + + + P +
Sbjct: 267 YEEAIKEYNKAIK-LKPDYV 285
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 119/233 (51%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K V+ ++GI+ N G+Y +I +++ ++ P + +GT+ + E A
Sbjct: 143 KLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEA 202
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + +AI+ NP+ +G + + L + EAI+ ++A+E PN A + +G +
Sbjct: 203 IKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFY 262
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K + A+++ + +KL + +Y G++L +IGEY+++ A+ KAI+L + + +
Sbjct: 263 KLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIY 322
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +L E+A++ + + + F+ A + R +++ LG A +D
Sbjct: 323 NNKGTSLFNLGEYEEAIKAYNKSIELKPDFAVAINNRTIVIEKLGSAGDATRD 375
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 111/210 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ ++ P + +G + + E AI ++ +AI+ P E++ +
Sbjct: 96 KYEEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNK 155
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + +GE E+I KA+E +P+ ADI + +G F + A++ + ++L+
Sbjct: 156 GISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPN 215
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ G +LS + +Y++A + + +AI+L+ N ++ + + L E+A++
Sbjct: 216 DAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYN 275
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + + ++Y+ +G+ L+ +G+++++I
Sbjct: 276 KAIKLKPDYVESYYNKGISLYNIGEYEESI 305
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 82/158 (51%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A + + GQA A G EAI++ +KA++ +P+ + +++G + A+E
Sbjct: 12 AAKKYYDAGQALALRGRYEEAIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYD 71
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ E AY G + + +Y++A + KAI+L N ++ + + L
Sbjct: 72 KSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDACSYYNKGNSFYKLGKY 131
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+A++ + + + + ++Y+ +G+ L+ +G+++++I
Sbjct: 132 EEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESI 169
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L + +AI D ++ + E D N + + LE ++ + + DKA++L P
Sbjct: 57 LAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDAC 116
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
+Y KG +F LG+ EEA+ + K
Sbjct: 117 SYYNKGNSFYKLGKYEEAIKEYNKA 141
>gi|307944493|ref|ZP_07659833.1| O-linked GlcNAc transferase [Roseibium sp. TrichSKD4]
gi|307772242|gb|EFO31463.1| O-linked GlcNAc transferase [Roseibium sp. TrichSKD4]
Length = 287
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ AI + + L Y AL+GRG A + A++DF AI N + A+
Sbjct: 114 QGQLQPAIQDYSRALNIRGDYRPALVGRGNAYRQLGQNGPALNDFNAAIAQNSADARAFY 173
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + + ++A++D + A+ P +A RGI + D NAA DLS V LD
Sbjct: 174 NRGLIYQSQNQHMKAVEDFATAIGLNPKAAAPYTARGISYLQLNDPNAAFSDLSMAVNLD 233
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K++ A+ GLAL +G+ A + KA+ LD N
Sbjct: 234 KKSSVAWANRGLALELLGKEVDARRNYTKALTLDTN 269
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+++ +P A RG A +L+ A++DF A+ NP++ +A+ R G+
Sbjct: 59 VIEANPQDANAYNTRGIAYGQAGKLDQAMTDFNAALNLNPNSYQAYTNRALVLRRQGQLQ 118
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
AIQD S+AL + L RG + A+ D +A + + + A+ GL
Sbjct: 119 PAIQDYSRALNIRGDYRPALVGRGNAYRQLGQNGPALNDFNAAIAQNSADARAFYNRGLI 178
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S ++ KA E AI L+ + Y L + A L + +DK+ S
Sbjct: 179 YQSQNQHMKAVEDFATAIGLNPKAAAPYTARGISYLQLNDPNAAFSDLSMAVNLDKKSSV 238
Query: 587 AYHLRGLLLHGLGQHKKAIKDLS 609
A+ RGL L LG+ A ++ +
Sbjct: 239 AWANRGLALELLGKEVDARRNYT 261
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A+G S I L+ +E P A+ + RGI + + A+ D +A + L+ + AY
Sbjct: 46 AVGSSAN-IDSLTSVIEANPQDANAYNTRGIAYGQAGKLDQAMTDFNAALNLNPNSYQAY 104
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
T L L G+ + A + + +A+ + ++ A Y+ L + AL +
Sbjct: 105 TNRALVLRRQGQLQPAIQDYSRALNIRGDYRPALVGRGNAYRQLGQNGPALNDFNAAIAQ 164
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ ++A++ RGL+ QH KA++D ++
Sbjct: 165 NSADARAFYNRGLIYQSQNQHMKAVEDFAT 194
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A I T I++NP A+ RG A G+ +A+ D + AL PNS R +V
Sbjct: 51 ANIDSLTSVIEANPQDANAYNTRGIAYGQAGKLDQAMTDFNAALNLNPNSYQAYTNRALV 110
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A++D S + + + + A G A +G+ A AI +
Sbjct: 111 LRRQGQLQPAIQDYSRALNIRGDYRPALVGRGNAYRQLGQNGPALNDFNAAIAQNSADAR 170
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + YQ KA+E + ++ + + Y RG+ L A DLS
Sbjct: 171 AFYNRGLIYQSQNQHMKAVEDFATAIGLNPKAAAPYTARGISYLQLNDPNAAFSDLS 227
>gi|145535942|ref|XP_001453700.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421430|emb|CAK86303.1| unnamed protein product [Paramecium tetraurelia]
Length = 506
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T +K K + +DF G+ N KY AI +D+ L +P +G A + +
Sbjct: 261 TWYNKGKKLQIDFL---GLTLGNLAKYQEAIECYDKALSLNPYNDNTWYNKGQALSKISK 317
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRR-GQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI + +AI NP + + G L + EAI+ +KAL PN L +
Sbjct: 318 FQDAIQCYDKAISINPYDFLSLNNKVGFTLHKLNKYKEAIECYNKALSINPNYYHTLCNK 377
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + K + A+ + ++ A+ G AL+ I + ++A + +AI L+ N
Sbjct: 378 GFLLTKMNKYQDAIVCYDKGLSINPNFDDAWQKKGFALTQIHKDQEAIVCYDRAITLNPN 437
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
F +AW + L ++A+EC ++ L I+ +A++ +G LL + ++++AI
Sbjct: 438 FYDAWCDKGYSLEKLNQHQQAMECYEKALSINPNLEQAWYTKGGLLTKVNKYQEAI 493
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 18/237 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + +GK+ A+SIFD +K +A +G+G A + + AI+ + +AI NP
Sbjct: 155 QGRELIYKGKFMEALSIFDSSIKLFDQDYDAYLGKGYALHNLNQYQEAIACYDKAISINP 214
Query: 447 SAGEAWKRRGQA-RAALGESV-------EAIQDLSKALEFEPNSADILHERG---IVNF- 494
+ G + +G ++ LG ++ EAI+ KA+ PN+ + +G ++F
Sbjct: 215 NDGNVYYNKGNILQSQLGFTLFTLNKYQEAIESYEKAISINPNNEHTWYNKGKKLQIDFL 274
Query: 495 -----KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-R 548
+ A+E + L+ N + + G ALS I +++ A + + KAI ++
Sbjct: 275 GLTLGNLAKYQEAIECYDKALSLNPYNDNTWYNKGQALSKISKFQDAIQCYDKAISINPY 334
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+FL + L ++A+EC + L I+ + +G LL + +++ AI
Sbjct: 335 DFLSLNNKVGFTLHKLNKYKEAIECYNKALSINPNYYHTLCNKGFLLTKMNKYQDAI 391
>gi|427706884|ref|YP_007049261.1| hypothetical protein Nos7107_1468 [Nostoc sp. PCC 7107]
gi|427359389|gb|AFY42111.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 1333
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G ASAI+ +D+ ++ P E RG A++ + AI P
Sbjct: 436 QGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRGLTLFHLERFAEAVAAYDTAIDLKP 495
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EAI S+A+E PN + + + K A+
Sbjct: 496 DHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSY 555
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
++L ++ + Y G+A + +Y +A ++ +A++L ++ E W +L Q
Sbjct: 556 DQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQ 615
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + +A+ +KAL F A++ RG+ L L + ++AI
Sbjct: 616 WSEAIASWDKALAA-------QPDFYLAWYNRGVALDNLVRREEAI 654
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S ++ +RG+ + ++A A++ +D + P + +A RG AI+ F+
Sbjct: 463 SYEYWFNRGLTLFHLERFAEAVAAYDTAIDLKPDHYKAWYNRGGTLGELGLFAEAIASFS 522
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P+ EAW + A LG+ EAI +ALE +P + + RGI + +
Sbjct: 523 QAIEIHPNYPEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQY 582
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + ++L + + G+ L ++ ++ +A + KA+ +F AW +
Sbjct: 583 TEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQPDFYLAWYNRGV 642
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A+ Q+ + I F ++ + + L L ++ +AI
Sbjct: 643 ALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFYLERYTEAI 688
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G +A AI+ F Q ++ P YPEA + A ++ AI+ + +A++ P E W
Sbjct: 512 GLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYY 571
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI ++ALE +P+ ++ +RG+V F K ++ A+ +
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ A+ G+AL ++ ++A ++ KAI + +F W + + FY L +A+
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFY--LERYTEAIV 689
Query: 573 CLQQVLYIDKRFSKAYHLRG 592
L I + +A+ RG
Sbjct: 690 AYDNALQIKLDYWEAWIGRG 709
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Query: 443 QSNPSA------------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
Q+NPS +AW +G +A G+ AI +A+E +P S + RG
Sbjct: 412 QANPSPTTTTNPANTAIQAQAWFYQGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRG 471
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F + F AV + L ++ A+ G L +G + +A + +AI++ N+
Sbjct: 472 LTLFHLERFAEAVAAYDTAIDLKPDHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNY 531
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EAW L +A+ Q L + + + ++ RG+ Q+ +AI
Sbjct: 532 PEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQYTEAI 586
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A +G +A +L +AI+ + AI+ P + E W RG L EA+ A
Sbjct: 431 QAWFYQGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRGLTLFHLERFAEAVAAYDTA 490
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +P+ + RG + F A+ S +++ A+ LAL +G+ +
Sbjct: 491 IDLKPDHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWE 550
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A ++ +A++L E W +Y+ +A +A+ Q L + + + +
Sbjct: 551 AITSYDQALELQPQDPETW-----YYRGIAFAVSEQYTEAIASYNQALELQPDYYEVWID 605
Query: 591 RGLLLHGLGQHKKAI 605
RG++L L Q +AI
Sbjct: 606 RGVVLFNLKQWSEAI 620
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA +Y AI+ ++Q L+ P Y E I RG ++ AI+ + +A+ + P
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A L EAI KA+ +P+ + + + F + + A+
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFYLERYTEAIVAY 691
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+++ + A+ G A+ + + + E
Sbjct: 692 DNALQIKLDYWEAWIGRGTAIGHVPDTETLE 722
>gi|325281840|ref|YP_004254382.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324313649|gb|ADY34202.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 652
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y AI + + ++ +P Y A + RG A R+ E A++D+ +AI P
Sbjct: 64 RGLAKLNLDDYEGAIQDYSKAIELNPNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEP 123
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A +G+ A +D SKAL + R +V K D+ A+ D
Sbjct: 124 RDAYVYANRGITEAEMGDFKAAEKDYSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADC 183
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S+ ++L+ + A+ G EY A E +A++ + + ++
Sbjct: 184 SSAIRLNMFSDDAFGLRGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKK 243
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ L +V+ ID + AY+ R +L +G+ AI+DL
Sbjct: 244 YPEVLNDYSEVIRIDSNYIYAYYNRAMLRAEVGEKNAAIRDL 285
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG +Y +AI F++ LK +P L+ R ++ ++D++E I+ +
Sbjct: 200 RGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKKYPEVLNDYSEVIRIDS 259
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ R RA +GE AI+DL K +E P++ I RG++ +D+ A +D
Sbjct: 260 NYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEMNPDNILIYFNRGLLKMDIRDWYGAYDDF 319
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + L + AY + +++ A++ H A+Q+
Sbjct: 320 TESIHLYPDFVKAYLARAAVNQELKDFEAADKDHYLAMQI 359
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R GQ + + AI + + + +P ++ RG+ D+ A++D S ++L+
Sbjct: 29 RMGQNAIYFDDYISAIDNFNNIIRVKPYLSEPYFFRGLAKLNLDDYEGAIQDYSKAIELN 88
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY Y G+A ++ +Y++A + +AI L+ + + ++ + + A +
Sbjct: 89 PNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEPRDAYVYANRGITEAEMGDFKAAEKD 148
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
+ L ID + AY R ++ L + A+ D SS R M
Sbjct: 149 YSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADCSSAIRLNM 191
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E+ + + T I A +A+ RG E +AI+DLS LE EP++ L
Sbjct: 465 ESYVEELTGRIMQTGDA-DAYLIRGSIYLNQKEYAKAIEDLSAILEKEPDNLLALFNLAN 523
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D+ +V+D + +++ + +Y + E + + +++D +F+
Sbjct: 524 ARMLMFDYIESVDDKIPRIVGEQQQ----------MQRKIDYSQVIEGYNECLRIDPDFV 573
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A ++ Y E+A+E QVL +DK ++AY RGLL GQ A DLS
Sbjct: 574 FALFNMANVYAKNGEIERAIETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKA 633
Query: 612 S 612
Sbjct: 634 G 634
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 380 SVDFRLSRGIAQVNEGK----YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SVD ++ R + + + + Y+ I +++ L+ DP + AL A E+E AI
Sbjct: 534 SVDDKIPRIVGEQQQMQRKIDYSQVIEGYNECLRIDPDFVFALFNMANVYAKNGEIERAI 593
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
F + ++ + EA+ RG G+ A DLSKA E SA
Sbjct: 594 ETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKAGELGIVSA 641
>gi|425453857|ref|ZP_18833610.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9807]
gi|389800024|emb|CCI20500.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9807]
Length = 266
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 72/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A S + +++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAESYWTELVTKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELA 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S +TE + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 55 AESYWTELVTKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTAL 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ A+ D + ++L + AY G A +G+++ A + + +A QL NF A
Sbjct: 115 EGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWA 174
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +L +A++ ++ + F +L GQ +A
Sbjct: 175 QANLALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ P A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|354565365|ref|ZP_08984540.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353549324|gb|EHC18766.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 373
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 5/239 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ FD++++ DP + EAL RG ++ E A+ DF AI NP+ A R
Sbjct: 74 RYEDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNPNFDWALASR 133
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQ + EA++D ++A++ N +L RG + + A++D +KL+
Sbjct: 134 GQTYQLMQRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKDFDRAIKLNPG 193
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT--QFYQDLANSEKALEC 573
N A G + YK+A + AI+ + N+ AW +T + Y L AL
Sbjct: 194 NAWALAGRGETYRLMQRYKQALKDFDCAIEFNPNY--AWALMTRGEVYLMLKRYNAALAD 251
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFN 632
+ + ++ ++R L L Q KKA D + + N W N FN
Sbjct: 252 FNRAIELEPNNDWCLYVRALAYQTLKQPKKARSDFAGAVKFAKERYKENFQDWHN-TFN 309
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG +Y A+ F++ +K + L RG + + A+ DF AI+ N
Sbjct: 132 SRGQTYQLMQRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKDFDRAIKLN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG+ + +A++D A+EF PN A L RG V K +NAA+ D
Sbjct: 192 PGNAWALAGRGETYRLMQRYKQALKDFDCAIEFNPNYAWALMTRGEVYLMLKRYNAALAD 251
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ ++L+ N LA ++ + KKA A++
Sbjct: 252 FNRAIELEPNNDWCLYVRALAYQTLKQPKKARSDFAGAVKF 292
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
A LDK ++ Y+ + YKKA + + ++++ N + Q YQ L
Sbjct: 16 AANTLDKCSEKIYSSCKAGMLVTNNYKKALKEFDRTLKINPNHISTLARRGQIYQFLLRY 75
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
E AL+ +V+ +D F++A +RG + ++++A+KD + + P+ W L
Sbjct: 76 EDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAI-ALNPNFDWAL 130
>gi|428298538|ref|YP_007136844.1| hypothetical protein Cal6303_1836 [Calothrix sp. PCC 6303]
gi|428235082|gb|AFZ00872.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 725
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 51/242 (21%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A F Q +++DP +A I RG AR +E EAA++D++ A+Q NP +A RG
Sbjct: 470 YDQAAIKFSQAIQKDPSNAKAYINRGNARYNLKEYEAALADYSRALQINPDEIKAHVNRG 529
Query: 457 QARAALGESVE--------AIQDLSKALEFEPNSADILHERGIVNFKF--------KDFN 500
R L + A+ D + AL N + RGIV + +D++
Sbjct: 530 NVRLILADYSTDPDRDYKLALTDFNNALRINSNEVEAYIRRGIVRAQIAKYSGESQQDYS 589
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + + ++ AY G I +Y Q ++ +
Sbjct: 590 KAIEDFNQALSINPSRAEAYFQRGTVRYQIAQYSS---------QFEKEY---------- 630
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ---------HKKAIKDLSSG 611
++A+E Q L + +F+KAY RG++ + L Q H +A+ DL
Sbjct: 631 -------QRAIEDFNQALNFNSQFAKAYLKRGIVRYELAQYGGKNSRYYHTQAVNDLQQA 683
Query: 612 SR 613
+R
Sbjct: 684 AR 685
>gi|186683665|ref|YP_001866861.1| hypothetical protein Npun_R3512 [Nostoc punctiforme PCC 73102]
gi|186466117|gb|ACC81918.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 535
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 23/327 (7%)
Query: 340 DSTESRSKLSFKWDMLKETSN--EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNE 394
D ESR K +L E N +A + + +T +++ D+ + +G A N
Sbjct: 217 DQPESR-----KAGLLVEQGNLLDAAKEYEAAITSYNQALKFQPDYYQAWNNQGKALRNL 271
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A++ F+Q LK P L +G R E A++ + EA+Q P +AW
Sbjct: 272 GRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNEAVQIKPDDPQAWYN 331
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L EA+ ++A++ +P+ + H +G K + + A+ V +
Sbjct: 332 RGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYEEALASYVRTVTIQP 391
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G AL +G ++A A +A+++ ++ +AW + +L +E+A+
Sbjct: 392 DKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHALSNLGRNEEAIASY 451
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAW 634
Q L I + A++ +G L LG+ K+ K ++ + P + N+ FN
Sbjct: 452 DQALKIKPDYHYAWYYKGAALIKLGRWKEGNKSINKAIE-INPDFVKNI-------FN-- 501
Query: 635 PFIRRRLLCTRLLKSTVSFAGLTLMEI 661
I+ + + T LL+ + F L + I
Sbjct: 502 --IQNKQIITSLLQK-LGFQKLVQIAI 525
>gi|452853099|ref|YP_007494783.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio piezophilus]
gi|451896753|emb|CCH49632.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio piezophilus]
Length = 378
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+ + G Q N+G+Y +AI F +++K D EA RG + + + AI DF+ +
Sbjct: 119 QFTVGFIQYNKGEYRAAIRAFSKVVKLDRNISEAYALRGASYSRLGHFQDAIKDFSRTLA 178
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ EA+ RG A LG V AI DL++AL + S + L R K F+ AV
Sbjct: 179 MNPAHREAYYNRGLANMQLGNLVRAIYDLTQALTLDSQSIETLTARAAAYSKLGQFDKAV 238
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFY 561
ED V L + + L +S G Y+ A+++ KA L EA G L + Y
Sbjct: 239 EDFQRAVDLAPSDNMLHALLADTQASNGNYEAAKQSADKAALL----AEALGDDELVRVY 294
Query: 562 QDLA 565
+ +A
Sbjct: 295 KGMA 298
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V R R + + + + A+ +++LK P + +A G + + E AAI F++
Sbjct: 82 VPARQYRAMLLLGQNRLDEALIDAEEVLKVKPDHTKAQFTVGFIQYNKGEYRAAIRAFSK 141
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ + + EA+ RG + + LG +AI+D S+ L P + + RG+ N + +
Sbjct: 142 VVKLDRNISEAYALRGASYSRLGHFQDAIKDFSRTLAMNPAHREAYYNRGLANMQLGNLV 201
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+ DL+ + LD ++ T A S +G++ KA E +A+ L
Sbjct: 202 RAIYDLTQALTLDSQSIETLTARAAAYSKLGQFDKAVEDFQRAVDL 247
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV--EAIQDLSKALEFEPNSADILH 487
++E A +AIQ +P+ A + R A LG++ EA+ D + L+ +P+
Sbjct: 63 DVETAKEYLDQAIQLDPTLVPARQYR--AMLLLGQNRLDEALIDAEEVLKVKPDHTKAQF 120
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G + + ++ AA+ S VKLD+ AY G + S +G ++ A + + + ++
Sbjct: 121 TVGFIQYNKGEYRAAIRAFSKVVKLDRNISEAYALRGASYSRLGHFQDAIKDFSRTLAMN 180
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
EA+ + L N +A+ L Q L +D + + R LGQ KA++D
Sbjct: 181 PAHREAYYNRGLANMQLGNLVRAIYDLTQALTLDSQSIETLTARAAAYSKLGQFDKAVED 240
Query: 608 L 608
Sbjct: 241 F 241
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
L +A++ +P R ++ + A+ D +K+ ++ A +G + G
Sbjct: 71 LDQAIQLDPTLVPARQYRAMLLLGQNRLDEALIDAEEVLKVKPDHTKAQFTVGFIQYNKG 130
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
EY+ A A K ++LDRN EA+ Y L + + A++ + L ++ +AY+ R
Sbjct: 131 EYRAAIRAFSKVVKLDRNISEAYALRGASYSRLGHFQDAIKDFSRTLAMNPAHREAYYNR 190
Query: 592 GLLLHGLGQHKKAIKDLS 609
GL LG +AI DL+
Sbjct: 191 GLANMQLGNLVRAIYDLT 208
>gi|393767279|ref|ZP_10355828.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
gi|392727180|gb|EIZ84496.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
Length = 290
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ F + + DP A R A R R+ AA+ DF++AI
Sbjct: 73 TRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAERQVGRD-AAALQDFSKAISI 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ G A+ R A G +A+ DL+ A+ P SA+ H RG+V K A+
Sbjct: 132 DPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQGQETQAIA 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D A + + + Y G +L + +Y KA E + A+ ++ +W + Y+
Sbjct: 192 DFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAYRGLAYEKS 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++ALE Q+ ID + A G + G+G
Sbjct: 252 GQRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++++ +P A RG A A + AI+DFT+AI +P++G A+ R A
Sbjct: 54 IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G A+QD SKA+ +PN R V + + A+ DL+ ++L E+ AY
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KALECLQQVL 578
GL G+ +A AI DRN + + + +A ++ KA+E L
Sbjct: 174 HARGLVRQKQGQETQAIADFDAAI--DRNPFVSAPYAARGQSLIATNQYPKAIEDYNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ + + ++ RGL GQ K+A+++
Sbjct: 232 NVNNKDATSWAYRGLAYEKSGQRKEALEN 260
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L++ ++ PN A + RG + FN A+ D + + +D + SAY LA
Sbjct: 54 IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G A + KAI +D N+ A+ + N ++AL L + + ++AY
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
H RGL+ GQ +AI D +
Sbjct: 174 HARGLVRQKQGQETQAIADFDA 195
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 21/223 (9%)
Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK------ 375
NT +Y+++ ++ +D T++ S + S A N+ ++ +
Sbjct: 72 NTRGAAYARAGQFNDAIADFTKAIS--------IDPNSGSAYNNRALAERQVGRDAAALQ 123
Query: 376 --SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
SK+IS+D + R + +G A+S + ++ P EA RG R Q
Sbjct: 124 DFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQ 183
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+DF AI NP + RGQ+ A + +AI+D + AL A
Sbjct: 184 GQETQAIADFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAY 243
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
RG+ K A+E+ +D N A LG +G
Sbjct: 244 RGLAYEKSGQRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + L+ ++ + + +AY G A + G++ A KAI +D N A+ +
Sbjct: 51 NVNIASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ + AL+ + + ID + AY R + G +A+ DL+ R +MP
Sbjct: 111 AERQVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIR-LMPE 168
>gi|126657091|ref|ZP_01728262.1| TPR repeat protein [Cyanothece sp. CCY0110]
gi|126621634|gb|EAZ92344.1| TPR repeat protein [Cyanothece sp. CCY0110]
Length = 279
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ Q++ G Y +AI F + +K + ++ RG + + E AI+D+ +AI+ N
Sbjct: 59 NKGVDQIDVGNYQAAIEAFTESIKLNKSDADSYYNRGYSYLLLEQFEEAINDYDQAIELN 118
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A L +AI+D S+A+E E N AD G K AA+
Sbjct: 119 AEFAYAYGNRCYAYYQLKNHEQAIEDCSQAIELEANYADFYIYLGNAKDDLKMHEAAILA 178
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ + L + N AY LA + +G+ +A E + KA+QL+ NF +A+ + +T+F +
Sbjct: 179 YNQAIALSENNPKAYYNRALAYNRLGKSLQAVEDYTKALQLNPNFADAYHNRGVTRFKLE 238
Query: 564 -----LANSEKALECLQ 575
+A+ EKA E Q
Sbjct: 239 EREKAIADLEKAAELFQ 255
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI FTE+I+ N S +++ RG + L + EAI D +A+E A R
Sbjct: 71 QAAIEAFTESIKLNKSDADSYYNRGYSYLLLEQFEEAINDYDQAIELNAEFAYAYGNRCY 130
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ K+ A+ED S ++L+ Y YLG A + ++ A A+ +AI L N
Sbjct: 131 AYYQLKNHEQAIEDCSQAIELEANYADFYIYLGNAKDDLKMHEAAILAYNQAIALSENNP 190
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ + Y L S +A+E + L ++ F+ AYH RG+ L + +KAI DL
Sbjct: 191 KAYYNRALAYNRLGKSLQAVEDYTKALQLNPNFADAYHNRGVTRFKLEEREKAIADLEKA 250
Query: 612 SR 613
+
Sbjct: 251 AE 252
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G + +G AI+ +++++ + AD + RG + F A+ D ++
Sbjct: 57 WYNKGVDQIDVGNYQAAIEAFTESIKLNKSDADSYYNRGYSYLLLEQFEEAINDYDQAIE 116
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ E AY A + +++A E +AI+L+ N+ + + +L DL E A+
Sbjct: 117 LNAEFAYAYGNRCYAYYQLKNHEQAIEDCSQAIELEANYADFYIYLGNAKDDLKMHEAAI 176
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q + + + KAY+ R L + LG+ +A++D +
Sbjct: 177 LAYNQAIALSENNPKAYYNRALAYNRLGKSLQAVEDYT 214
>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
Length = 717
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 357 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 416
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 417 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 476
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 477 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 536
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+A++ +G++L LG++ +A++ + ++
Sbjct: 537 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATK 575
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 391 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 450
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 451 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 510
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 511 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 568
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 569 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARR 609
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A +G
Sbjct: 495 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQG 554
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 555 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 614
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 615 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 674
Query: 577 VL 578
L
Sbjct: 675 SL 676
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 415 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 474
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 475 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 534
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 535 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 594
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 595 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 654
Query: 591 RGLLLHGLGQHKKAIK 606
G LGQ+++AI+
Sbjct: 655 LGNSWFKLGQYERAIQ 670
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 566 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 625
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 626 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 681
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 526 LNKINNALESYSKAGQFNPQFSQAHYSQGII------LQKLGRNSEALEAF--TQATKAN 577
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 578 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 637
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 638 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 697
Query: 498 DFNAAVEDLSACVKLDKE 515
+ + ++ + K+D E
Sbjct: 698 ELQQSPQNPTP--KVDSE 713
>gi|425455598|ref|ZP_18835318.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
gi|389803511|emb|CCI17584.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
Length = 270
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TRI++ + +RG+ + + KY A++ F + + DP Y EA + RG Q +
Sbjct: 35 TRIAQGNNQDAIGHYNRGVGYIQQEKYDLALAEFTKAINIDPRYAEAYLNRGFLYEQQEK 94
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SD+ +AI NP EA+ RG G+ A+ D ++A+ P A RG
Sbjct: 95 PDLALSDYNQAININPRLAEAYNNRGFLYVGQGKPDLALSDYNQAININPRLALAYSNRG 154
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + K D LAL+ KA+ ++
Sbjct: 155 LL-------------YAGQGKPD-----------LALAEFN----------KALNINPRL 180
Query: 551 LEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
EA+ G L Y D + AL + L I+ RF+ AY+ RGLL + + +KAI+D
Sbjct: 181 AEAYNGRGLLYYLYYDQGKPDLALAEFNKALNINPRFALAYNNRGLLYYYRQEREKAIRD 240
Query: 608 LSSGS 612
+
Sbjct: 241 FRQAA 245
>gi|406884520|gb|EKD31910.1| hypothetical protein ACD_77C00219G0007 [uncultured bacterium]
Length = 664
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG+ ++ A+ F++ L+ +P P+A + RG + F + A+ D+ AI
Sbjct: 131 FSRGVTYFLSQQFEKAVQDFNRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISL 190
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N E + RR + E+ +A++DL++AL + ++ R +V + K+ A+
Sbjct: 191 NRFDPEGYIRRSRIYVLQNENKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALS 250
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL ++ D N L S IG+Y A E + + I+++ N + A+ + + L
Sbjct: 251 DLERVLRDDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQL 310
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A++ Q + + F+ AY R + +GQ A D
Sbjct: 311 GKFRDAMDDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAKSD 353
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + EGKY AI F+ + + D EA RG A+ + A DF + ++ N
Sbjct: 31 RGRQFLIEGKYTQAIENFNILTQLDTTLYEAYFFRGIAKYNLGDFLGAQIDFDKTLKINQ 90
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R + +G+ A++DL +A++ P+ + RG+ F + F AV+D
Sbjct: 91 LYTPAYHYRAITLSRIGKYDLALKDLEEAVDLRPSYTGLYFSRGVTYFLSQQFEKAVQDF 150
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + + AY G + +G+ KA + AI L+R E + ++ Y
Sbjct: 151 NRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISLNRFDPEGYIRRSRIYVLQNE 210
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++KALE L Q L +D S Y R L+ + + A+ DL
Sbjct: 211 NKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDL 252
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R + + N + A+S +++L++DP L R R+ + A+ D+ I+
Sbjct: 233 FNRALVRYNNKEIMGALSDLERVLRDDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEI 292
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ R LG+ +A+ D S+A+ P+ A+ R V + F +A
Sbjct: 293 NPNNVLAYYNRAALFLQLGKFRDAMDDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAKS 352
Query: 505 DLSACVKLDKENKS 518
D K +E KS
Sbjct: 353 DYEIAQKKIREYKS 366
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R SR NE K A+ +Q L D R R +E+ A+SD ++
Sbjct: 200 RRSRIYVLQNENK--KALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDLERVLR 257
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P R R+ +G+ A++D + +E PN+ + R + + F A+
Sbjct: 258 DDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQLGKFRDAM 317
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+D S + L + +AY S +G++ A+
Sbjct: 318 DDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAK 351
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ G+ +AI++ + + + + RGI + DF A D +K+++
Sbjct: 31 RGRQFLIEGKYTQAIENFNILTQLDTTLYEAYFFRGIAKYNLGDFLGAQIDFDKTLKINQ 90
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY Y + LS IG+Y A + +A+ L ++ + Y EKA++
Sbjct: 91 LYTPAYHYRAITLSRIGKYDLALKDLEEAVDLRPSYTGLYFSRGVTYFLSQQFEKAVQDF 150
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L + + AY RG LG KA+ D ++
Sbjct: 151 NRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTA 187
>gi|443311594|ref|ZP_21041220.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
gi|442778323|gb|ELR88590.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
Length = 983
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +AI+ FD L+ +P+ P++ RG + + E AI F + +++ +AW R
Sbjct: 737 QYENAIASFDNELELNPINPDSWYYRGLSCKELKRYENAIFSFDKVVETQTDNYQAWFHR 796
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + EAI A++F PN ++G+ K + A E V++ E
Sbjct: 797 GIVLGRMKKYEEAIASYDNAIKFSPNYHQAWVDKGVALGKLQRHQEAFEAFDRAVQIQSE 856
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G+AL I Y+ A + K I+L+ N +AW L E+AL
Sbjct: 857 DAVAWLNRGMALEVIERYEDAIASFDKTIELNPNSYKAWNSKGYLLVQLERDEEALASFD 916
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Q L I+ ++ Y+ + L GQ K AI++L
Sbjct: 917 QALTIEPTYAPPYYNKALSYALQGQPKLAIENLQKA 952
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 361 EAKR--NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
E KR N F ++ ++++ + RGI KY AI+ +D +K P Y +A
Sbjct: 768 ELKRYENAIFSFDKVVETQTDNYQAWFHRGIVLGRMKKYEEAIASYDNAIKFSPNYHQAW 827
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ +G A + + A F A+Q AW RG A + +AI K +E
Sbjct: 828 VDKGVALGKLQRHQEAFEAFDRAVQIQSEDAVAWLNRGMALEVIERYEDAIASFDKTIEL 887
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PNS + +G + + + A+ + ++ Y L+ + G+ K A E
Sbjct: 888 NPNSYKAWNSKGYLLVQLERDEEALASFDQALTIEPTYAPPYYNKALSYALQGQPKLAIE 947
Query: 539 AHLKAIQLDRNFLE 552
KAI ++ + E
Sbjct: 948 NLQKAIDINPRYKE 961
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE I G + AI+ F A+ E W R A L + AI
Sbjct: 688 PEDYINEGKVQLATENYPDAIALFDLALAIKRDRPEVWHDRSMAFWHLKQYENAIASFDN 747
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
LE P + D + RG+ + K + A+ V+ +N A+ + G+ L + +Y+
Sbjct: 748 ELELNPINPDSWYYRGLSCKELKRYENAIFSFDKVVETQTDNYQAWFHRGIVLGRMKKYE 807
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A ++ AI+ N+ +AW L ++A E + + I + A+ RG+
Sbjct: 808 EAIASYDNAIKFSPNYHQAWVDKGVALGKLQRHQEAFEAFDRAVQIQSEDAVAWLNRGMA 867
Query: 595 LHGLGQHKKAI 605
L + +++ AI
Sbjct: 868 LEVIERYEDAI 878
>gi|425471732|ref|ZP_18850583.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9701]
gi|389882323|emb|CCI37201.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9701]
Length = 266
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 73/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A + + +++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAENYWTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE +PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TE + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 59 WTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEG 118
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A +L
Sbjct: 119 KYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANL 178
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +A++ ++ + F +L GQ +A
Sbjct: 179 ALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 34/260 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G+ A+ +D+ L +P++ EAL G +LEAA+ F P
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE--- 504
E W G LGE ++++ L+ +P S D + RGIV + F AVE
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYD 316
Query: 505 ------------------------DLSACVK-----LDKENKSAYTYLGLALS--SIGEY 533
DL A V+ L+ E A TY LAL+ G+
Sbjct: 317 MALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDL 376
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + K + L N+ EAW L + E+ALEC + + +D K + R
Sbjct: 377 RAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARAD 436
Query: 594 LLHGLGQHKKAIKDLSSGSR 613
+ +G+ +A++ R
Sbjct: 437 CAYKVGKLDEALESYQHAVR 456
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG+ +A+ + D++++ P +A + RG E A+ + +A+ NP+ E
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +LG EA++ +AL P + L G+ + + AAVE C +
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E+ + LG +GE +K+ EA+ + +D +AW + L +A+E
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314
Query: 574 LQQVLYIDKRFSKAYHLRG 592
L I F+ AY+ RG
Sbjct: 315 YDMALAIHDEFASAYYNRG 333
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E+E A+ I+ +P +AW RRG LG EA++ +AL+ P + L
Sbjct: 137 EMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINL 196
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + A+E + ++ + A LG+ L + + A EA + +
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E W L Y L EK++E L ID A++ RG++L+ LG+ +A++
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVE 313
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D +RGI G++ A+ +D L + A RG A A Q +LEAA+ +
Sbjct: 291 SKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYE 350
Query: 440 EAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
++ P A A++ +G RAA K L+ + N + + G
Sbjct: 351 RVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLGCC 403
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+E V LD +T +G+ +A E++ A++LD +
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESNEH 463
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
AW + + E+ALE +Q L +D + + Y + L LG+ ++I+ L +
Sbjct: 464 AWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAF 523
Query: 613 R 613
R
Sbjct: 524 R 524
>gi|284041455|ref|YP_003391385.1| hypothetical protein Slin_6629 [Spirosoma linguale DSM 74]
gi|283820748|gb|ADB42586.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
Length = 458
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 15/261 (5%)
Query: 365 NKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKED 411
N+ C +I+ + + DF ++RG ++ Y A++ ++ L++
Sbjct: 137 NRGLCRLQINYTTTALADFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKS 196
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P P AL GRG AR + + AI DF A++ + E + RRG ++ LGE A+ D
Sbjct: 197 PNKPLALAGRGYARFKLEDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTD 256
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG--LALSS 529
K ++ P+ L RG + + AV D+ +++ N + Y + S+
Sbjct: 257 FDKTVQLNPSHFRALFSRGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFITAST 316
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ + + KA +L + +A+ +S+ AL+ L + + + ++ Y
Sbjct: 317 LQLFGSVVQDRYKATELTDDRADAYLVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYF 376
Query: 590 LRGLLLHGLGQHKKAIKDLSS 610
+RG++ LG K A+ D +S
Sbjct: 377 IRGVVRSSLGDQKGALIDCNS 397
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI + + + A+ F++ ++ P RG R A++DFT+A+
Sbjct: 102 LYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALADFTKAVTL 161
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ RG + L + A+ D + +LE PN L RG FK +D+ A+
Sbjct: 162 APNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKLEDYKNAIL 221
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
D + V+L K++ Y GL S +GE++ A K +QL+ + A L
Sbjct: 222 DFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFSRGFCKSRL 281
Query: 558 TQFYQDLANSEKALE 572
Q +A+ +K++E
Sbjct: 282 GNVKQAVADIDKSIE 296
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D ++ P A + RG R Q + A+ DF AI+ +P+ + RG R +
Sbjct: 87 LDLAIEFTPGDANAYLYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQIN 146
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ A+ D +KA+ PN +L RG + D+ A+ D + ++ A
Sbjct: 147 YTTTALADFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGR 206
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A + +YK A +A++L ++ E + L E AL + + ++
Sbjct: 207 GYARFKLEDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPS 266
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
+A RG LG K+A+ D+
Sbjct: 267 HFRALFSRGFCKSRLGNVKQAVADI 291
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 8/232 (3%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RG+ ++ +A++ F + + P LI RG + + + A++D+ ++
Sbjct: 134 FYYNRGLCRLQINYTTTALADFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSL 193
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P+ A RG AR L + AI D ++A+E + ++ + RG+V + +F A
Sbjct: 194 EKSPNKPLALAGRGYARFKLEDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENA 253
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D V+L+ + A G S +G K+A K+I++ + + F
Sbjct: 254 LTDFDKTVQLNPSHFRALFSRGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFIT 313
Query: 563 DLANSEKALECLQQVLY-----IDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A++ + + Q Y D R + AY +RG++ + G K A++DL+
Sbjct: 314 --ASTLQLFGSVVQDRYKATELTDDR-ADAYLVRGIIRNSGGDSKLALQDLN 362
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 108/290 (37%), Gaps = 83/290 (28%)
Query: 369 CVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYP 415
C +++ K D+ LS RG A+ Y +AI F++ ++ P
Sbjct: 175 CKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKLEDYKNAILDFNRAVELSKDDP 234
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG----------QARAALGES 465
E RG ++ E E A++DF + +Q NPS A RG QA A + +S
Sbjct: 235 ELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFSRGFCKSRLGNVKQAVADIDKS 294
Query: 466 VE--------------------------AIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+E +QD KA E + AD RGI+ D
Sbjct: 295 IEMGTANTTNKAYYSDFITASTLQLFGSVVQDRYKATELTDDRADAYLVRGIIRNSGGDS 354
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++DL+ V+L N Y G+ SS+G+ K A
Sbjct: 355 KLALQDLNRAVELSPTNAETYFIRGVVRSSLGDQKGA----------------------- 391
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
++C + ++ R ++AY+LRG++ G A DLS
Sbjct: 392 ----------LIDC-NSSIKLNPRHAEAYYLRGIIRFDSGDEAAACIDLS 430
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ GI + Y A+ F + ++P + R + +++ A D AI+
Sbjct: 34 FNEGIQKSAAKDYPGALQAFTMSIIQNPENGPSYYNRALTKISLNDIQGANLDLDLAIEF 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG R + A+QD ++A+E PN A + RG+ + A+
Sbjct: 94 TPGDANAYLYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALA 153
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V L + + G + +YK A + +++ N A L
Sbjct: 154 DFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKL 213
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+ + + + K + Y+ RGL+ LG+ + A+ D
Sbjct: 214 EDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDF 257
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 366 KKFCVTRISKSKSI--SVDFRLSRGIAQVNEGKY------ASAISIFDQILKEDPMYPE- 416
+ FC +R+ K +D + G A Y AS + +F ++++ E
Sbjct: 274 RGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFITASTLQLFGSVVQDRYKATEL 333
Query: 417 ------ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
A + RG R + + A+ D A++ +P+ E + RG R++LG+ A+
Sbjct: 334 TDDRADAYLVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYFIRGVVRSSLGDQKGALI 393
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
D + +++ P A+ + RGI+ F D AA DLS
Sbjct: 394 DCNSSIKLNPRHAEAYYLRGIIRFDSGDEAAACIDLS 430
>gi|449125237|ref|ZP_21761539.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
gi|448939206|gb|EMB20123.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
Length = 338
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF I+ NP +A+ +G
Sbjct: 59 AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + ++ A ED++ +KL+ ++
Sbjct: 119 NDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYEQNNEYEKAFEDINTAIKLNPKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A AI+LD N + + L Y ++ + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ + Y +RG L GQ+K+AI+D ++G R M PH
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIR-MYPH 277
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N S E + G + AI +KA+E +P + RG + + + A
Sbjct: 34 KQNYSQAEYFNIAGNTAKEKKDRTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++L+ + AY + GL + G Y KA + AI L+ E + ++ Y+
Sbjct: 94 LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYE 153
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EKA E + + ++ + +K Y+LRG L + AI D
Sbjct: 154 QNNEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDF 199
>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 666
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 306 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 365
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 366 RGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 425
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 426 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 485
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + +FS+A++ +G++L LG++ +A++ + ++
Sbjct: 486 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATK 524
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 340 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQG 399
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 400 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 459
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 460 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 517
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH L + ++AI R
Sbjct: 518 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARR 558
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A +G
Sbjct: 444 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQG 503
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 504 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 563
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 564 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 623
Query: 577 VL 578
L
Sbjct: 624 SL 625
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 364 LGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 423
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 424 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 483
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 484 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 543
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 544 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 603
Query: 591 RGLLLHGLGQHKKAIK 606
G LGQ+++AI+
Sbjct: 604 LGNSWFKLGQYERAIQ 619
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 515 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 574
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 575 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 630
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 475 LNKINNALESYSKAGQFNPQFSQAHYSQGII------LQKLGRNSEALEAF--TQATKAN 526
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 527 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 586
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 587 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 646
Query: 498 DFNAAVEDLSACV 510
+ + ++ + V
Sbjct: 647 ELQQSPQNPTPKV 659
>gi|434399044|ref|YP_007133048.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428270141|gb|AFZ36082.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 187
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 73/135 (54%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ + RG Q+E E AI++F AI+ P +A+ RG A LG+S + I D S+
Sbjct: 42 PKVFVDRGKEYIDQQEYEKAIANFNRAIELAPKFAKAYFNRGAAYGLLGQSEKEIADYSR 101
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E P SA+ RG + ++ A+ D ++LD ++ +AY GLA ++ + +
Sbjct: 102 AIELNPQSAETYVARGKAYARLLEYAEAIADFDRAIELDPQSANAYYNRGLAYQTLRQDE 161
Query: 535 KAEEAHLKAIQLDRN 549
KA +AI+L+ N
Sbjct: 162 KANADFNRAIELNMN 176
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 72/133 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG +++ +Y AI+ F++ ++ P + +A RG A + E I+D++ AI+
Sbjct: 46 VDRGKEYIDQQEYEKAIANFNRAIELAPKFAKAYFNRGAAYGLLGQSEKEIADYSRAIEL 105
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + E + RG+A A L E EAI D +A+E +P SA+ + RG+ + A
Sbjct: 106 NPQSAETYVARGKAYARLLEYAEAIADFDRAIELDPQSANAYYNRGLAYQTLRQDEKANA 165
Query: 505 DLSACVKLDKENK 517
D + ++L+ N+
Sbjct: 166 DFNRAIELNMNNE 178
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + +RG +++ A+ + + ++L + AY G A +G+ +K +
Sbjct: 40 NDPKVFVDRGKEYIDQQEYEKAIANFNRAIELAPKFAKAYFNRGAAYGLLGQSEKEIADY 99
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L+ E + + Y L +A+ + + +D + + AY+ RGL L Q
Sbjct: 100 SRAIELNPQSAETYVARGKAYARLLEYAEAIADFDRAIELDPQSANAYYNRGLAYQTLRQ 159
Query: 601 HKKAIKDLS 609
+KA D +
Sbjct: 160 DEKANADFN 168
Score = 39.7 bits (91), Expect = 5.9, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + ++RG A +YA AI+ FD+ ++ DP A RG A R+ E A +DF
Sbjct: 109 SAETYVARGKAYARLLEYAEAIADFDRAIELDPQSANAYYNRGLAYQTLRQDEKANADFN 168
Query: 440 EAIQSN 445
AI+ N
Sbjct: 169 RAIELN 174
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 34/260 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G+ A+ +D+ L +P++ EAL G +LEAA+ F P
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE--- 504
E W G LGE ++++ L+ +P S D + RGIV + F AVE
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYD 316
Query: 505 ------------------------DLSACVK-----LDKENKSAYTYLGLALS--SIGEY 533
DL A V+ L+ E A TY LAL+ G+
Sbjct: 317 MALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDL 376
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + K + L N+ EAW L + E+ALEC + + +D K + R
Sbjct: 377 RAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARAD 436
Query: 594 LLHGLGQHKKAIKDLSSGSR 613
+ +G+ +A++ R
Sbjct: 437 CAYKVGKLDEALESYQHAVR 456
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG+ +A+ + D++++ P +A + RG E A+ + +A+ NP+ E
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +LG EA++ +AL P + L G+ + + AAVE C +
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E+ + LG +GE +K+ EA+ + +D +AW + L +A+E
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314
Query: 574 LQQVLYIDKRFSKAYHLRG 592
L I F+ AY+ RG
Sbjct: 315 YDMALAIHDEFASAYYNRG 333
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E+E A+ I+ +P +AW RRG LG EA++ +AL+ P + L
Sbjct: 137 EMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINL 196
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + A+E + ++ + A LG+ L + + A EA + +
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E W L Y L EK++E L ID A++ RG++L+ LG+ +A++
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVE 313
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D +RGI G++ A+ +D L + A RG A A Q +LEAA+ +
Sbjct: 291 SKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYE 350
Query: 440 EAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
++ P A A++ +G RAA K L+ + N + + G
Sbjct: 351 RVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLGCC 403
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+E V LD +T +G+ +A E++ A++LD +
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESNEH 463
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
AW + + E+ALE +Q L +D + + Y + L LG+ ++I+ L +
Sbjct: 464 AWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAF 523
Query: 613 R 613
R
Sbjct: 524 R 524
>gi|113477065|ref|YP_723126.1| hypothetical protein Tery_3569 [Trichodesmium erythraeum IMS101]
gi|110168113|gb|ABG52653.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 314
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + RG A G+ A++ F+ + +P Y A RG
Sbjct: 31 AIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYNRGNLL 90
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AIS F +AIQ PS +AW G + LG EA ++ +A + +PN
Sbjct: 91 NDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKPNLYQG 150
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ G V F + +++ +KL + A+ + G L +G+ + ++ KAI+
Sbjct: 151 WYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFYLGDAEGEIMSYEKAIE 210
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ ++ EAW +L Q + N KA+ C + + I +S AY+
Sbjct: 211 VKIDYQEAWNNLGQALSNSGNWYKAIICFDKAIEIKPGYSLAYY 254
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI FD+ +K P Y A RG A L A+++F AI P+ AW
Sbjct: 26 GKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYN 85
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG EAI KA++ +P+ + GI + + A E+ K+
Sbjct: 86 RGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKP 145
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ G L +G Y+++ ++ + I+L N AW T FY L ++E +
Sbjct: 146 NLYQGWYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFY--LGDAEGEIM 203
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + + + +A++ G L G KAI
Sbjct: 204 SYEKAIEVKIDYQEAWNNLGQALSNSGNWYKAI 236
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 35/195 (17%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI F +AI+ P AW RG A LG A+ + + A+ EPN + R
Sbjct: 27 KYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYNR 86
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + L+ +G Y++A + KAIQ+ +
Sbjct: 87 GNL----------------------------------LNDLGRYQEAISSFEKAIQIQPS 112
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F +AW +L + L + ++A E QQ I + ++ G +L LG++++++K
Sbjct: 113 FYQAWYNLGISWNRLGHYQEAFENYQQATKIKPNLYQGWYNEGRVLFDLGRYQRSLKSFE 172
Query: 610 SGSRTMMPHL-IWNL 623
+ H WN
Sbjct: 173 QVIKLKPNHYRAWNF 187
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G+ LS++G+Y+ A A KAI++ ++ AW + + L AL + ++
Sbjct: 19 GVNLSTLGKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPN 78
Query: 584 FSKAYHLRGLLLHGLGQHKKAI 605
+ A++ RG LL+ LG++++AI
Sbjct: 79 YYLAWYNRGNLLNDLGRYQEAI 100
>gi|374386594|ref|ZP_09644093.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
12061]
gi|373223767|gb|EHP46112.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
12061]
Length = 657
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 14/246 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y AI+ + Q + +P Y A + RG A R+ + A+ D+ EAI +P
Sbjct: 67 RGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYMYRGIAYHNLRKFKEAMRDYNEAITLDP 126
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + RG +A G+ A +D SK+L + R I+ K D A+ D
Sbjct: 127 SDAYVYANRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADC 186
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH---LKAIQLDRNFLEA----WGHLTQ 559
+A +KL+ + A+ G +Y A E + LKA ++ L + W + +
Sbjct: 187 NAAIKLNMFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKK 246
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
F AL+ +++ ID + AY+ R +L +G + AI DL T ++
Sbjct: 247 F-------PDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNI 299
Query: 620 IWNLTR 625
+ R
Sbjct: 300 LIYFNR 305
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
A D + YSKS + DNK + +R+ +++E ++ + C I K
Sbjct: 140 AETGDYKGAEKDYSKSLMIDNKLLAAYLNRA-------IMREKLDDPEGAMADCNAAI-K 191
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S D RG + Y +AI +++ LK +P + L+ R ++ A+
Sbjct: 192 LNMFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKKFPDAL 251
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+ E I+ + + A+ R RA +G+ AI DL K +E P++ I RG++ +
Sbjct: 252 KDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNILIYFNRGLLKME 311
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDR 548
KD+ A ED S ++L + AY +++ Y A+E H +A+ +DR
Sbjct: 312 IKDYAGAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADEDHGRALAVMDR 365
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G Y A + + L D A + R R + E A++D AI+ N
Sbjct: 134 NRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADCNAAIKLN 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG + AI+D ++AL+ P + IL R IV ++ K F A++D
Sbjct: 194 MFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKKFPDALKD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+D AY + + +G+Y A K ++ + + + + + ++
Sbjct: 254 YGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNILIYFNRGLLKMEIK 313
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A E + + + F KAY R + + L + A +D
Sbjct: 314 DYAGAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADED 355
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 11/182 (6%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E I + I P+A + + RG E +AI+D E EPN L +
Sbjct: 467 IEENIQQLSSKITQQPTADD-YLLRGIFYMNSREYPKAIEDFMAVNELEPNHILALFNQA 525
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D+ ++ED V++ E K + I +Y + E + K +++D F
Sbjct: 526 NARMQMLDYIESIED--NTVEVIGEEKQ--------VKRIIDYSQVLEGYRKCLEIDPAF 575
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A ++ Y ++A+E +V+ DK F++AY RGLL G+ +A DLS
Sbjct: 576 IFALYNIGNVYVKSEKIDQAIEAYSEVIRQDKEFAEAYFNRGLLYIYTGRKAEANADLSK 635
Query: 611 GS 612
Sbjct: 636 AG 637
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F D+ +A+++ + +++ Y + GLA ++ +Y+ A + +AI L+ N+ A+
Sbjct: 40 FDDYVSAIDNFNNIIRIKPYLSEPYFFRGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYM 99
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y +L ++A+ + + +D + Y RG+ G +K A KD S
Sbjct: 100 YRGIAYHNLRKFKEAMRDYNEAITLDPSDAYVYANRGITKAETGDYKGAEKDYS 153
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++ + D L RGI +N +Y AI F + + +P + AL + AR +
Sbjct: 479 TQQPTADDYLLRGIFYMNSREYPKAIEDFMAVNELEPNHILALFNQANARM-------QM 531
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+ E+I+ N E Q + + S + ++ K LE +P L+ G V K
Sbjct: 532 LDYIESIEDNTV--EVIGEEKQVKRIIDYS-QVLEGYRKCLEIDPAFIFALYNIGNVYVK 588
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ + A+E S ++ DKE AY GL G +KAE
Sbjct: 589 SEKIDQAIEAYSEVIRQDKEFAEAYFNRGLLYIYTG--RKAE 628
>gi|119590339|gb|EAW69933.1| tetratricopeptide repeat domain 13, isoform CRA_e [Homo sapiens]
Length = 700
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 407 ILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+L+E+P A+ GRG A + + E A+ + + I P E +++R + +
Sbjct: 1 MLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVFEQRAEILSP 60
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K A
Sbjct: 61 LGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAML 119
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRN-----------FLEAWGHLTQFYQDLANSEKA 570
Y GL G K E+ Q RN F E W +L N E A
Sbjct: 120 YKGLTFFHRGLLKNEVESCAVIRQEPRNQRLLKAEEKSDFEELW---RPSMLELGNFEAA 176
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E Q+ L +++ + LRG++L+ G ++A+K+
Sbjct: 177 TESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNF 214
>gi|218779357|ref|YP_002430675.1| hypothetical protein Dalk_1507 [Desulfatibacillum alkenivorans
AK-01]
gi|218760741|gb|ACL03207.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 356
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
G G A ++ E A F++AI P+ AW G + A+G+ EAI++ SKA E +
Sbjct: 190 GWGVALLRMKKHEEACEKFSKAIHLRPNEATAWTNWGISLTAIGKGNEAIKNFSKATELK 249
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ AD G+ ++ + + A+ +++D N +A + GL L+ + YK+A E
Sbjct: 250 PDYADAWRSWGVALYRMEKYEQAIAKYIQTLEIDPHNPNALSDWGLCLNQMQRYKEATEK 309
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+AI D N AW DL EKA+ Q
Sbjct: 310 FSQAINFDGNNPIAWIGWGMALTDLQQYEKAMRWTQ 345
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A + W G A + E+ +A K++ FEPNS + G+ + K A E S
Sbjct: 150 AAKNWFLIGNAYLNMEENEKAALAFQKSISFEPNSCSPWNGWGVALLRMKKHEEACEKFS 209
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L +A+T G++L++IG+ +A + KA +L ++ +AW +
Sbjct: 210 KAIHLRPNEATAWTNWGISLTAIGKGNEAIKNFSKATELKPDYADAWRSWGVALYRMEKY 269
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+ Q L ID A GL L+ + ++K+A + S
Sbjct: 270 EQAIAKYIQTLEIDPHNPNALSDWGLCLNQMQRYKEATEKFS 311
>gi|404366637|ref|ZP_10972019.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
gi|313689480|gb|EFS26315.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
Length = 559
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG F ++ E A+ D+ +AI+ +P+ + RG L + EAI D +KA+E +P
Sbjct: 32 RGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNCNHFLKKYKEAIIDYNKAIELDP 91
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A + RG + +D+ A+ D + ++++ + Y Y G+ ++ YK+A +
Sbjct: 92 NNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYYIYCGICNYNLKNYKEALKNF 151
Query: 541 LKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
AIQL+ N + G + F +D +KA++ + L ++ + Y R +
Sbjct: 152 ENAIQLNPNNATYYNNRGKIKYFLEDY---KKAIKDYDKALELNPYAAITYKNRAESKYM 208
Query: 598 LGQHKKAIKDLSSG 611
L +K A+ D++
Sbjct: 209 LENYKDALIDINKA 222
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + E I+ NP+ + RG L + EA+ D +KA+E +PN+A + RG N
Sbjct: 12 IEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNCNH 71
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K + A+ D + ++LD N + Y G S+ +Y+ A + KAI+++ N +
Sbjct: 72 FLKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYY 131
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +L N ++AL+ + + ++ + Y+ RG + + L +KKAIKD
Sbjct: 132 IYCGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKD 184
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ I +K+I +D + +RG + + Y +AI +++ ++ +P I
Sbjct: 74 KKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYYIY 133
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
G + + A+ +F AIQ NP+ + RG+ + L + +AI+D KALE P
Sbjct: 134 CGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKDYDKALELNP 193
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+A R + +++ A+ D++ ++L+
Sbjct: 194 YAAITYKNRAESKYMLENYKDALIDINKAIELN 226
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 73/148 (49%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
++++ I++L++ + PN+A+ + RG N+ K + AV D + ++LD N Y
Sbjct: 7 DTLKEIEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLR 66
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G + +YK+A + KAI+LD N + + + L + E A+ + + ++
Sbjct: 67 GNCNHFLKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPN 126
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Y G+ + L +K+A+K+ +
Sbjct: 127 EEIYYIYCGICNYNLKNYKEALKNFENA 154
>gi|428299078|ref|YP_007137384.1| hypothetical protein Cal6303_2406 [Calothrix sp. PCC 6303]
gi|428235622|gb|AFZ01412.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 584
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 18/256 (7%)
Query: 367 KFCVTRISKSKSISVDFRLSRG----IAQVNEGK-YASAISIFDQILKEDPMYPEALIGR 421
+F S ++++++ + S G +N K Y A + D+ +K D + E
Sbjct: 284 RFTEALTSFDRAVAINPKYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEI---- 339
Query: 422 GTARAF---------QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
G A+A+ Q++ E AI+ A+ P EAW R A L + EA+ +
Sbjct: 340 GAAQAWSEMAHALSGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASI 399
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA+E +PN A +G + K + A++ + LD +N + + L + +
Sbjct: 400 QKAIELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILDPKNPEGWANTSVVLWHLKQ 459
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A A AI ++RN EAW + L+ + AL+ + I+ + + A+ RG
Sbjct: 460 YQSALTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDALKSYNSAIKINPKSADAFTGRG 519
Query: 593 LLLHGLGQHKKAIKDL 608
++L L + +AI L
Sbjct: 520 IILSKLKYYPQAIAAL 535
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE----- 450
++ A++ FD+ + +P Y + R T + E A + EAI+ + GE
Sbjct: 284 RFTEALTSFDRAVAINPKYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEIGAAQ 343
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW A + + +AI ++A+ +P+ A+ R + ++ + + A+ + +
Sbjct: 344 AWSEMAHALSGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAI 403
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+L AY G L++ +YK A +++ KA+ LD E W + + L + A
Sbjct: 404 ELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILDPKNPEGWANTSVVLWHLKQYQSA 463
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
L + I++ +A++ RGL+L L +HK A+K +S
Sbjct: 464 LTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDALKSYNSA 504
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A +Y A++ + ++ P Y +A +GT A Q++ + A+ + +A+ +
Sbjct: 381 NRSVALWQLQQYPEALASIQKAIELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILD 440
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W L + A+ A+ NS + + RG+V A++
Sbjct: 441 PKNPEGWANTSVVLWHLKQYQSALTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDALKS 500
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++ +K++ ++ A+T G+ LS + Y +A A +A++L+
Sbjct: 501 YNSAIKINPKSADAFTGRGIILSKLKYYPQAIAALQEALKLN 542
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A Q +L AI+D+ + +P+ AW +G L EA+ +A+ P
Sbjct: 241 RAIAYRQQDQLSKAIADYDRLLAVDPNDAIAWTAQGLILEQLSRFTEALTSFDRAVAINP 300
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE-----NKSAYTYLGLALSSIGEYKK 535
+ R + + K + A +K D + A++ + ALS +Y+K
Sbjct: 301 KYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEIGAAQAWSEMAHALSGQQQYEK 360
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A +A+ + ++ EAW + + L +AL +Q+ + + +++AY +G +L
Sbjct: 361 AIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAIELKPNYAQAYFNQGTIL 420
Query: 596 HGLGQHKKAIK 606
Q+K A++
Sbjct: 421 ATQKQYKTALQ 431
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ ++ + P Y EA R A ++ A++ +AI+ P+ +A+ +
Sbjct: 357 QYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAIELKPNYAQAYFNQ 416
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + A+Q KAL +P + + +V + K + +A+ + +++
Sbjct: 417 GTILATQKQYKTALQSYKKALILDPKNPEGWANTSVVLWHLKQYQSALTAADHAIAINRN 476
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ GL L+S+ +K A +++ AI+++ +A+ L +A+ LQ
Sbjct: 477 SFEAWYNRGLVLTSLSRHKDALKSYNSAIKINPKSADAFTGRGIILSKLKYYPQAIAALQ 536
Query: 576 QVLYIDKR 583
+ L ++ +
Sbjct: 537 EALKLNPQ 544
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA+ +A+ P + + + V K K + A+ +K DK+ A TY +A
Sbjct: 73 EALTACEQAITLRPKNPILWADHSGVLLKMKKYPEAIASAERALKFDKKTSLALTYQCMA 132
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLE-----AWGHLTQFYQDLANSEKALECLQQVLYID 581
S +G ++ + +A+++D N+ + AW H +L ++A + L ++
Sbjct: 133 FSELGRNEEGLDNCNQALKVDGNWGKQSPKLAWLHRGVILTNLGQLDQAAIAYDRTLLLE 192
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ S A R L++ +GQ ++AI +
Sbjct: 193 PKDSLALAYRCELMNKIGQPERAITN 218
>gi|118389490|ref|XP_001027829.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89309599|gb|EAS07587.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1342
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 382 DFRLSRGIAQVN--EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ L + IA V + KY +I + Q L + E L + E AI ++
Sbjct: 930 NYILYKNIANVYSIQRKYYESIESYKQALNLNAQNIELLFLLANTYFLSGQTENAIDNYK 989
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKD 498
EAI+ NPS +++ G+ L + +A++ L+++PNS++ ++ G++ + FK+
Sbjct: 990 EAIKLNPSYHQSYFELGKIYEELKQYQQAVEQFQVYLQYQPNSSETYYKIGMIEYLHFKN 1049
Query: 499 FNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
A ++L+ N S+ Y YLGL + +G+YK+A++ L+AI++++N + + L
Sbjct: 1050 IQKAQICFIQSIQLNPNNNSSCYRYLGLIQNELGDYKQAKQNFLQAIEINKNEEDLYFIL 1109
Query: 558 TQF-YQDLANSEKALECLQQVL 578
Q Y + +A+E L++ L
Sbjct: 1110 AQISYNYFKDIWQAIEYLEKYL 1131
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 124/309 (40%), Gaps = 81/309 (26%)
Query: 377 KSISVD-------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ- 428
KSIS+D + L+R Q++ G + SAI + ++L++DP +A G G F
Sbjct: 687 KSISLDPYNKWALYNLAR--CQLSLGNFESAIKYYKKVLEQDPEDEQANAGIGLVLGFYL 744
Query: 429 ----------------------------------RELEAAISDFTEAIQSNPSAGEAWKR 454
++L++A S + +Q N + + ++
Sbjct: 745 QDFNQAIEHYKIAINTNFLKLEYLINLANLHLNIKDLDSAQSYINQCMQINSNTPKIYEI 804
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERG------------------------ 490
+ G S++A++ + K +E EP +AD+ H G
Sbjct: 805 LCKIEQQKGNSLKAVEYIQKQMELEPQNADVYHRLGQLYHQSNPEEAKKNYIKSLQLDPK 864
Query: 491 --IVNFKF----KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+VN++ K+F ++ + ++ +N A + + ++L G+Y A + K +
Sbjct: 865 QKMVNYRLGLLEKEFTQQIKYYQNELIINPQNIEAISAVAMSLQCQGKYDLALQFLQKGL 924
Query: 545 QLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ D +N + ++Y+ + + ++AL Q + + + Y L G +
Sbjct: 925 KRDPNNYILYKNIANVYSIQRKYYESIESYKQALNLNAQNIELLFLLANTYFLSGQTENA 984
Query: 598 LGQHKKAIK 606
+ +K+AIK
Sbjct: 985 IDNYKEAIK 993
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 388 GIAQVNEGKYASAISIFDQILK----EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
G+ Q G Y A F Q ++ E+ +Y I + + +++ AI + +Q
Sbjct: 1076 GLIQNELGDYKQAKQNFLQAIEINKNEEDLY---FILAQISYNYFKDIWQAIEYLEKYLQ 1132
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P+ + + + + +V A + K ++ P + + + + ++ K+++ ++
Sbjct: 1133 LFPNQEKQEQLLNEWYLKVNNTVRARETYEKQIQENPQNISAIMKIASIEYQVKNYHKSI 1192
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQF 560
+ +++D NK + +GL + +Y+KA E I++ ++F A+ G + Q
Sbjct: 1193 FQYNKVLEIDPNNKLSLYNIGLCFKQLEKYEKAVEYFQNVIKIYQSFSLAYYQIGEIEQR 1252
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
Y L N +KA++ L++ + + + + +Y GL
Sbjct: 1253 Y--LNNPKKAIKFLRKAIELKGQDADSYFYLGL 1283
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ + IQ NP A + + ++I +K LE +PN+ L+ G+ + +
Sbjct: 1161 YEKQIQENPQNISAIMKIASIEYQVKNYHKSIFQYNKVLEIDPNNKLSLYNIGLCFKQLE 1220
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ AVE +K+ + AY +G + + KKA + KAI+L +++ +
Sbjct: 1221 KYEKAVEYFQNVIKIYQSFSLAYYQIGEIEQRYLNNPKKAIKFLRKAIELKGQDADSYFY 1280
Query: 557 LTQFYQDLANSEKALECLQQVL 578
L + + +ALEC Q++L
Sbjct: 1281 LGLAFDKIDYKYEALECFQKLL 1302
>gi|425446027|ref|ZP_18826041.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
gi|389733863|emb|CCI02417.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
Length = 396
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+ KY A++ F++ +K +P Y A GRG +Q++ E A++DF +AI NP+ A+
Sbjct: 2 QKKYELALADFNKAMKLNPNYDLAYSGRGELYYYQKKYELALADFNKAIDINPNLASAYN 61
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + A+ D +KA+E + A RG + + + A+ D + ++LD
Sbjct: 62 NRGLIYYYQKKYELALADFNKAIELDSKLAIAYSNRGNIYSDQQKYELALADFNKAIELD 121
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY+ G +Y+ A KAI+LD A+ + Y D E AL
Sbjct: 122 SKLAEAYSNRGRFYYYQQKYELALADFNKAIELDSKLAGAYSNRGNIYSDQQKYELALAD 181
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + +D + + AY RG + +++ A+ D++
Sbjct: 182 FNKAIELDSKLAMAYSNRGRFYYYQQKYELALADINKA 219
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
++ + + +K+ ++ ++ L+ RG + KY A++ F++ + +P A
Sbjct: 2 QKKYELALADFNKAMKLNPNYDLAYSGRGELYYYQKKYELALADFNKAIDINPNLASAYN 61
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG +Q++ E A++DF +AI+ + A+ RG + + A+ D +KA+E +
Sbjct: 62 NRGLIYYYQKKYELALADFNKAIELDSKLAIAYSNRGNIYSDQQKYELALADFNKAIELD 121
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
A+ RG + + + A+ D + ++LD + AY+ G S +Y+ A
Sbjct: 122 SKLAEAYSNRGRFYYYQQKYELALADFNKAIELDSKLAGAYSNRGNIYSDQQKYELALAD 181
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
KAI+LD A+ + +FY E AL + + + +D + + AY RG
Sbjct: 182 FNKAIELDSKLAMAYSNRGRFYYYQQKYELALADINKAIELDSKLAMAYSNRG 234
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + +K+I ++ L+ RG+ + KY A++ F++ ++ D A
Sbjct: 37 KKYELALADFNKAIDINPNLASAYNNRGLIYYYQKKYELALADFNKAIELDSKLAIAYSN 96
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + Q++ E A++DF +AI+ + EA+ RG+ + A+ D +KA+E +
Sbjct: 97 RGNIYSDQQKYELALADFNKAIELDSKLAEAYSNRGRFYYYQQKYELALADFNKAIELDS 156
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A RG + + + A+ D + ++LD + AY+ G +Y+ A
Sbjct: 157 KLAGAYSNRGNIYSDQQKYELALADFNKAIELDSKLAMAYSNRGRFYYYQQKYELALADI 216
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH---- 596
KAI+LD A+ + Y E AL + + +D + ++AY+ RG L
Sbjct: 217 NKAIELDSKLAMAYSNRGGIYSLQQKDELALADFNKAIELDSKLAEAYYNRGNLYRLQQK 276
Query: 597 ---GLGQHKKAIK 606
L + KAIK
Sbjct: 277 YELALSDYNKAIK 289
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 13/250 (5%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + +K+I +D +L+ RG ++ KY A++ F++ ++ D EA
Sbjct: 71 KKYELALADFNKAIELDSKLAIAYSNRGNIYSDQQKYELALADFNKAIELDSKLAEAYSN 130
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG +Q++ E A++DF +AI+ + A+ RG + + A+ D +KA+E +
Sbjct: 131 RGRFYYYQQKYELALADFNKAIELDSKLAGAYSNRGNIYSDQQKYELALADFNKAIELDS 190
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A RG + + + A+ D++ ++LD + AY+ G I ++ +E
Sbjct: 191 KLAMAYSNRGRFYYYQQKYELALADINKAIELDSKLAMAYSNRG----GIYSLQQKDELA 246
Query: 541 L----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
L KAI+LD EA+ + Y+ E AL + + ++K A GL+ +
Sbjct: 247 LADFNKAIELDSKLAEAYYNRGNLYRLQQKYELALSDYNKAIKLNKNAWFAMMGIGLVKY 306
Query: 597 GLGQHKKAIK 606
G +AIK
Sbjct: 307 EQGSISEAIK 316
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITAR---------IELAKLCSLRNWSKAIRILDS 61
Y K + + ++ + +DS +A A + R ELA L +++KAI LDS
Sbjct: 136 YYQQKYELALADFNKAIELDSKLAGAYSNRGNIYSDQQKYELA----LADFNKAIE-LDS 190
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
LA +Y NR Y + ++ + D +KA++LD L AY +G +S + E
Sbjct: 191 KLAMAY-----SNRGRFYYYQQKYELALADINKAIELDSKLAMAYSNRGGIYSLQQKDEL 245
Query: 122 ALSVWEKGYE 131
AL+ + K E
Sbjct: 246 ALADFNKAIE 255
>gi|434381646|ref|YP_006703429.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
gi|404430295|emb|CCG56341.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
Length = 681
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 116/223 (52%), Gaps = 7/223 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE---AW 452
KY +I +D+ +K +P + +A R ++ + A+ D +A++ N + +
Sbjct: 51 KYDKSIEYYDKTIKLNPKHKKAYNNRALSKNDIGKYYEALEDIKKALELNTVKEDLYIYY 110
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G ++ +GE EAI+ ++A+E ++ + RG F + ++ AV+D + +KL
Sbjct: 111 DNLGLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKL 170
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKA 570
+ + K Y G+ + + +Y KA + K I++D N+ EA+ + +++F+ + N A
Sbjct: 171 NNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYND--A 228
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
++ + + ID + +AY+ + L + L +++++ + S S+
Sbjct: 229 IDDFNKAIDIDIEYEEAYYYKALSYYALDNYRESLYNFSVLSK 271
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + N G++ AI F++ ++ + Y RG + + A+ DFT+AI+ N
Sbjct: 114 GLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKLNNK 173
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG + L + +AI+D SK +E + N + RG+ F + +N A++D +
Sbjct: 174 FKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFN 233
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +D E + AY Y L+ ++ Y+++
Sbjct: 234 KAIDIDIEYEEAYYYKALSYYALDNYRES 262
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + +Y AI F ++++ D Y EA + RG ++ F + AI DF +AI
Sbjct: 179 LNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDI 238
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA+ + + AL E++ + S
Sbjct: 239 DIEYEEAYYYKALSYYALDNYRESLYNFS 267
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 62/128 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG KY A+ F + +K + + + RG + R+ AI DF++ I+ +
Sbjct: 146 NRGCTYFILEKYDEAVKDFTKAIKLNNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEID 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA+ RG ++ L + +AI D +KA++ + + + + + + ++ ++ +
Sbjct: 206 SNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDIDIEYEEAYYYKALSYYALDNYRESLYN 265
Query: 506 LSACVKLD 513
S KL+
Sbjct: 266 FSVLSKLN 273
>gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
silvestris BL2]
gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
silvestris BL2]
Length = 778
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 3/252 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S+D +RG+A+ EG Y +I+ ++Q ++ D P+ RG A + E + AI+D+
Sbjct: 96 SIDAYRNRGLARQIEGDYDGSIADYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYD 155
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ N +A+ RGQAR + AI D + ++ PN A +R D
Sbjct: 156 KAIRLNGKFAKAFYNRGQARYLKNQPDRAIADFDEFIKLSPNEAKGYVQRADARLAKADV 215
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + +K+D N A+++ G A G+ +K+ KAI+L E++ +
Sbjct: 216 LGAIADYDSAIKVDGGNGEAFSHRGEARRLQGDLEKSLLDQNKAIELAAT-PESYVNRAL 274
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
Y D + A+ + L + ++ A+ RG + G + A+ DL+ + ++ P L
Sbjct: 275 VYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNK-ALSIDPRL 333
Query: 620 IWNLTRWRNLCF 631
+L+ +R F
Sbjct: 334 PVSLS-FRGDVF 344
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P L RG A+ + +LE AI+DF+ A+ NP++ +A++ RG AR G+ +I D ++
Sbjct: 63 PGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAYRNRGLARQIEGDYDGSIADYNQ 122
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A+ + S D+ + RG +++ A+ D ++L+ + A+ G A
Sbjct: 123 AIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQA 174
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE+ + R A Q +L+ AI+D EA+ P A+ +RG+ + G+ A+ DL+K
Sbjct: 266 PESYVNRALVYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNK 325
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL +P L RG V + A+ D + +++ + +AY G A G+
Sbjct: 326 ALSIDPRLPVSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLP 385
Query: 535 KAEEAHLKAIQL 546
KA+ + KA+ L
Sbjct: 386 KAKADYQKALSL 397
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 67/266 (25%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D SRG A VN+G+Y AI+ +D+ ++ + + +A RG AR + + + AI+DF
Sbjct: 130 SPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQARYLKNQPDRAIADFD 189
Query: 440 EAIQSNPSA----------------------------------GEAWKRRGQARAALGE- 464
E I+ +P+ GEA+ RG+AR G+
Sbjct: 190 EFIKLSPNEAKGYVQRADARLAKADVLGAIADYDSAIKVDGGNGEAFSHRGEARRLQGDL 249
Query: 465 ---------SVE-----------------------AIQDLSKALEFEPNSADILHERGIV 492
++E AI D +AL P +RG V
Sbjct: 250 EKSLLDQNKAIELAATPESYVNRALVYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRV 309
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
D A+ DL+ + +D + ++ G + +A +A+++ +F+
Sbjct: 310 KRLSGDLEGALGDLNKALSIDPRLPVSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVA 369
Query: 553 AWGHLTQFYQDLANSEKALECLQQVL 578
A+ Q Y+ KA Q+ L
Sbjct: 370 AYAGRGQAYEKAGQLPKAKADYQKAL 395
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 55/135 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R + ++GK AI+ D+ L P Y A RG + +LE A+ D +A+
Sbjct: 270 VNRALVYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNKALSI 329
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + RG A S AI D ++AL P+ RG K A
Sbjct: 330 DPRLPVSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLPKAKA 389
Query: 505 DLSACVKLDKENKSA 519
D + L E +A
Sbjct: 390 DYQKALSLPGEADAA 404
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 59/130 (45%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
E + +L+ RG+ + D A+ D S + + + AY GLA G+Y +
Sbjct: 59 EAATPGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAYRNRGLARQIEGDYDGSIA 118
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI++D + + + ++A+ + + ++ +F+KA++ RG +
Sbjct: 119 DYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQARYLK 178
Query: 599 GQHKKAIKDL 608
Q +AI D
Sbjct: 179 NQPDRAIADF 188
>gi|46201738|ref|ZP_00054480.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 495
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
R+S + + R G+ +G++ AI+ F + L P EA G A
Sbjct: 94 VRLSDREPDRPEHRFGLGLVVSAQGRFDHAIAHFREGLALAPGDAEARCNLGLACRAAGR 153
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI F +A + P +A G A A G V+A+ ++AL EP AD+ + G
Sbjct: 154 LEEAIDAFAKAAEMAPGLAKAHGNLGGALFAAGRWVDAVDAWARALALEPRHADVRSDMG 213
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K + AV+ ++D N LG AL +G ++A +++ + I LD
Sbjct: 214 VALAKLGRLDEAVDCFRQASEIDPGNPGHGYNLGRALHDLGRLEEALQSYAQVIALDPCH 273
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L A + ++ + ++AL +VL +D A RG L LG+ ++A++ ++
Sbjct: 274 LSAHLNSGVIFKKAGDYDQALAAYDRVLELDPANGAASLNRGKTLFELGRLEEALEAYTT 333
Query: 611 GSRTMMP---HLIWNLTRWRNLCFNAWPFI 637
+R +MP + L R + + WP I
Sbjct: 334 -ARNLMPDDADALSELVHLRKVVCD-WPGI 361
>gi|428311286|ref|YP_007122263.1| hypothetical protein Mic7113_3107 [Microcoleus sp. PCC 7113]
gi|428252898|gb|AFZ18857.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 309
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A +G+Y AI+ ++Q+++ DP A RG AR Q++ AI+D+ +A+
Sbjct: 110 LNRGLAYYRQGRYLDAITDYNQVIQLDPTDYRAYYNRGLARFEQKDYSEAIADYNQALSH 169
Query: 445 NPS-----AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P+ + RG L + A+ D S+A+ + N A + RG ++ + D+
Sbjct: 170 TPTQHSQAMATVYNDRGLTYFQLEDIENAMLDFSQAIHLDSNDARAYYNRGCISHRQGDY 229
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
A+ D +A ++ + AY G+A +G + A E
Sbjct: 230 TGAIRDFTASLQRNPNQAQAYINRGIARYQLGYLQTALE 268
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 30/238 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS + + DF G+ + G A+ F Q + D A R +
Sbjct: 31 ISIAGMNAFDF-FKSGVEKTQSGDLKQAVGDFTQAIALDSQMAGAYSNRCLVYIQLGDYS 89
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A D TEA++ NP+ E + RG A G ++AI D ++ ++ +P + RG+
Sbjct: 90 KATEDCTEALKLNPNNTETYLNRGLAYYRQGRYLDAITDYNQVIQLDPTDYRAYYNRGLA 149
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
F+ KD++ A+ D + + S A++++ DR
Sbjct: 150 RFEQKDYSEAIADYNQALSHTPTQHSQ------AMATVYN--------------DRG--- 186
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
LT F L + E A+ Q +++D ++AY+ RG + H G + AI+D ++
Sbjct: 187 ----LTYF--QLEDIENAMLDFSQAIHLDSNDARAYYNRGCISHRQGDYTGAIRDFTA 238
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A N+ T S++++ + RG+ +A+ F Q + D A R
Sbjct: 161 ADYNQALSHTPTQHSQAMATVYN-DRGLTYFQLEDIENAMLDFSQAIHLDSNDARAYYNR 219
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
G Q + AI DFT ++Q NP+ +A+ RG AR LG A++DL K E
Sbjct: 220 GCISHRQGDYTGAIRDFTASLQRNPNQAQAYINRGIARYQLGYLQTALEDLRKGAE 275
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AI LDS +A +Y NR Y QL + DC +AL+L+P + Y+
Sbjct: 57 AVGDFTQAI-ALDSQMAGAYS-----NRCLVYIQLGDYSKATEDCTEALKLNPNNTETYL 110
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G A+ GR +A++ + +
Sbjct: 111 NRGLAYYRQGRYLDAITDYNQ 131
>gi|434389002|ref|YP_007099613.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019992|gb|AFY96086.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 186
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V +I+++ +V F RG+ + + AI+ FD+ ++ DP Y +A I RG A+
Sbjct: 32 VVQIAQTDKSAVTF-YDRGVEKYKAEDFKGAIADFDRAIEIDPSYAQAFISRGNAKDDAG 90
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+D+ +AI+ P+ +A+ RG + LG+ AI D KA++F P + + R
Sbjct: 91 KPQEAIADYDKAIELIPTYADAYNNRGITKYRLGDKQAAIADYDKAIQFNPKYDNAYYNR 150
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ + D A D ++L+ + Y
Sbjct: 151 GLAKYDLGDNQGARADYDRALELNPQYGKNY 181
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + + + AI+DF AI+ +PS +A+ RG A+ G+ EAI D KA+E P
Sbjct: 48 RGVEKYKAEDFKGAIADFDRAIEIDPSYAQAFISRGNAKDDAGKPQEAIADYDKAIELIP 107
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
AD + RGI ++ D AA+ D ++ + + +AY GLA +G+ + A +
Sbjct: 108 TYADAYNNRGITKYRLGDKQAAIADYDKAIQFNPKYDNAYYNRGLAKYDLGDNQGARADY 167
Query: 541 LKAIQLDRNF 550
+A++L+ +
Sbjct: 168 DRALELNPQY 177
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA ++RG+ +K +DF A+ D +++D A+ G A G+ ++A +
Sbjct: 41 SAVTFYDRGVEKYKAEDFKGAIADFDRAIEIDPSYAQAFISRGNAKDDAGKPQEAIADYD 100
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L + +A+ + L + + A+ + + + ++ AY+ RGL + LG +
Sbjct: 101 KAIELIPTYADAYNNRGITKYRLGDKQAAIADYDKAIQFNPKYDNAYYNRGLAKYDLGDN 160
Query: 602 KKAIKD 607
+ A D
Sbjct: 161 QGARAD 166
>gi|397781376|ref|YP_006545849.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939878|emb|CCJ37133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
Length = 1067
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGR--GTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
G+Y A++ F+++L DPM + L R G A E AI+ +T + P+ E
Sbjct: 844 GRYEEAVACFEKVLDADPM--DTLTQRRLGEANEKAGRYEEAIAAYTRVLDREPANIETL 901
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R A LG EAI+ + K + P + +L RG V K ++ A+ +++
Sbjct: 902 HARASALIHLGRYGEAIKSIDKIIVILPENPAVLFMRGAVLEKAGRYDDALVSYEKALQV 961
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+N + + G+ L ++G Y A + AI L + AW L ++A+
Sbjct: 962 APKNAAIWNATGMLLDALGRYPDAIRSFDTAIDLGNADIHAWLCKGVALSHLGRHDQAVT 1021
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
C VL D R ++A++L+G L LG+ +A++
Sbjct: 1022 CYDMVLGADPRHARAWYLKGRALDRLGRFAEAVE 1055
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG A ++ G Y A+ FD++L+ DP ALIGR +A E A+ A+Q+
Sbjct: 528 MSRGEALMHLGDYEKALGCFDRVLEGDPADRGALIGRSSALERLGRYEDALGSIDRAMQA 587
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ R+ LG +A P + L G+V + A
Sbjct: 588 GPADTGTLTRKAWLLEGLGRYADAANCYEVLRNANPGAGGNLLNLGVVLAVLGRYEEAAG 647
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+ D + A+ G AL +G Y A E + A L +L
Sbjct: 648 WFGQAVEADPGDLFAWFNRGRALERMGRYADAAECYANVTAGRPGDTGACFALASVLAEL 707
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++A+E +VL D + LR +L +G+HK+A
Sbjct: 708 GRHQEAIEYCDRVLASDTSNAAVTKLRAEMLEAVGRHKEA 747
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A V+ G+Y A+ + I++ P A RG + E A++ F + + ++P
Sbjct: 805 ALVHMGRYEEALECSNSIIEVSPENQAAWQRRGEIFMWLGRYEEAVACFEKVLDADPMDT 864
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+R G+A G EAI ++ L+ EP + + LH R + A++ +
Sbjct: 865 LTQRRLGEANEKAGRYEEAIAAYTRVLDREPANIETLHARASALIHLGRYGEAIKSIDKI 924
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + EN + G L G Y A ++ KA+Q+ W L
Sbjct: 925 IVILPENPAVLFMRGAVLEKAGRYDDALVSYEKALQVAPKNAAIWNATGMLLDALGRYPD 984
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ + + A+ +G+ L LG+H +A+
Sbjct: 985 AIRSFDTAIDLGNADIHAWLCKGVALSHLGRHDQAV 1020
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 8/251 (3%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A R C RI ++ S +G A + G Y+ A++ FD++L DP +AL G+
Sbjct: 165 AYREAAACFERILRANPESPGAFARKGAALLYRGDYSGAVASFDRVLAGDPHNLDALYGK 224
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
A + A + ++P A +G G EA++ K +P+
Sbjct: 225 ARALEHLGRFQDAADCYGMITAADPGNTPALHHQGSLLLRSGRYAEALECFDKVALADPD 284
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + + G+V ++ AV+ +K D+ + G+AL +G+Y A +
Sbjct: 285 NMAVRYSMGLVYDTLGRYDRAVKSFDHILKHDQGQIHVWYARGMALFRLGQYADAIRSFD 344
Query: 542 KAIQ----LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ ++ ++ + L F +D A S Q+ L +D + RG L
Sbjct: 345 RVLESRAMTGMKWIGSTSDLALFERDEAGS----PLKQKPLKVDAWSETILNRRGTALLH 400
Query: 598 LGQHKKAIKDL 608
LG++ +A+ D
Sbjct: 401 LGRYAEALADF 411
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
++I + K +D+ + ++ +ML+ A + + S+ + + +L R +
Sbjct: 106 ATIVEKKPADT----NAWYWRGEMLERLGRYADVAEAYARALDGNSEDVVLQEKLGRTLE 161
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+ G Y A + F++IL+ +P P A +G A ++ + A++ F + +P +
Sbjct: 162 RT--GAYREAAACFERILRANPESPGAFARKGAALLYRGDYSGAVASFDRVLAGDPHNLD 219
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A + +A LG +A +P + LH +G + + + A+E
Sbjct: 220 ALYGKARALEHLGRFQDAADCYGMITAADPGNTPALHHQGSLLLRSGRYAEALECFDKVA 279
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +N + +GL ++G Y +A ++ ++ D+ + W
Sbjct: 280 LADPDNMAVRYSMGLVYDTLGRYDRAVKSFDHILKHDQGQIHVW 323
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
I +G A+ A+ F +A++ +P G G+A A LG EA + L KAL+
Sbjct: 18 INQGNAQFEAGNYTEAVKSFEKALRIDPENGPVRLSMGRALACLGRDGEAAEWLRKALDS 77
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P A IL G V + D+ A E + V+ + +A+ + G L +G Y E
Sbjct: 78 SPGDAGILRALGHVLARTGDYQEAAECFATIVEKKPADTNAWYWRGEMLERLGRYADVAE 137
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
A+ +A+ + + L + + +A C +++L + A+ +G L
Sbjct: 138 AYARALDGNSEDVVLQEKLGRTLERTGAYREAAACFERILRANPESPGAFARKGAALLYR 197
Query: 599 GQHKKAI 605
G + A+
Sbjct: 198 GDYSGAV 204
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
E + K +++D D+ R + +D L K I K +
Sbjct: 273 ECFDKVALAD---PDNMAVRYSMGLVYDTLGRYDRAVK-----SFDHILKHDQGQIHVWY 324
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQS 444
+RG+A G+YA AI FD++L+ M IG + A F+R+ + ++
Sbjct: 325 ARGMALFRLGQYADAIRSFDRVLESRAMTGMKWIGSTSDLALFERD------EAGSPLKQ 378
Query: 445 NPSAGEAW-----KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P +AW RRG A LG EA+ D + LE +P + +L + +
Sbjct: 379 KPLKVDAWSETILNRRGTALLHLGRYAEALADFERVLESDPGNIPVLQQSSTALIHLGRY 438
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ A L A ++ + N A L ++G Y A AHL+A+
Sbjct: 439 DEAGICLDAVLEREPHNVVARLMKADVLENLGRYGDA-LAHLEAV 482
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 355 LKETSNEAKRNKKFCV--TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
L E + +A R ++ TR+ + +++ +R A ++ G+Y AI D+I+ P
Sbjct: 870 LGEANEKAGRYEEAIAAYTRVLDREPANIETLHARASALIHLGRYGEAIKSIDKIIVILP 929
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
P L RG + A+ + +A+Q P W G ALG +AI+
Sbjct: 930 ENPAVLFMRGAVLEKAGRYDDALVSYEKALQVAPKNAAIWNATGMLLDALGRYPDAIRSF 989
Query: 473 SKALEFEPNSADILHE---RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
A++ +ADI H +G+ + AV + D + A+ G AL
Sbjct: 990 DTAIDL--GNADI-HAWLCKGVALSHLGRHDQAVTCYDMVLGADPRHARAWYLKGRALDR 1046
Query: 530 IGEYKKAEEAHLKAIQ 545
+G + +A E KA++
Sbjct: 1047 LGRFAEAVECFGKALE 1062
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A G+YA A + + P A + A + AI + S
Sbjct: 664 FNRGRALERMGRYADAAECYANVTAGRPGDTGACFALASVLAELGRHQEAIEYCDRVLAS 723
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ S K R + A+G EA + + LE P+ D G+ + + A+
Sbjct: 724 DTSNAAVTKLRAEMLEAVGRHKEAAEAYERYLEVSPDDRDAQMALGMALERDGRYGDAIR 783
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K D+ + A+ L AL +G Y++A E I++ AW + + L
Sbjct: 784 HYALVLKGDEGDAEAWYTLESALVHMGRYEEALECSNSIIEVSPENQAAWQRRGEIFMWL 843
Query: 565 ANSEKALECLQQVLYID 581
E+A+ C ++VL D
Sbjct: 844 GRYEEAVACFEKVLDAD 860
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 42/260 (16%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAA--------- 434
+++G AQ G Y A+ F++ L+ DP + G A A R+ EAA
Sbjct: 18 INQGNAQFEAGNYTEAVKSFEKALRIDPENGPVRLSMGRALACLGRDGEAAEWLRKALDS 77
Query: 435 -----------------ISDFTEA-------IQSNPSAGEAWKRRGQARAALGESVEAIQ 470
D+ EA ++ P+ AW RG+ LG + +
Sbjct: 78 SPGDAGILRALGHVLARTGDYQEAAECFATIVEKKPADTNAWYWRGEMLERLGRYADVAE 137
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC----VKLDKENKSAYTYLGLA 526
++AL + NS D++ + + + + A + +AC ++ + E+ A+ G A
Sbjct: 138 AYARAL--DGNSEDVVLQEKL--GRTLERTGAYREAAACFERILRANPESPGAFARKGAA 193
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L G+Y A + + + D + L+A + + L + A +C + D +
Sbjct: 194 LLYRGDYSGAVASFDRVLAGDPHNLDALYGKARALEHLGRFQDAADCYGMITAADPGNTP 253
Query: 587 AYHLRGLLLHGLGQHKKAIK 606
A H +G LL G++ +A++
Sbjct: 254 ALHHQGSLLLRSGRYAEALE 273
>gi|88604042|ref|YP_504220.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189504|gb|ABD42501.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 576
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G ++ +Y AI +D ++ DP E +G A Q + A+S + A+Q
Sbjct: 133 MAKGNVLSDQKQYEDAIRAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQK 192
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ +AW +G A+ LG +A++ AL + P A +G+ + ++ A++
Sbjct: 193 DSKDSKAWYNKGNAQYNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAID 252
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
A + LD + A+T LG + + EY A A A++L++ W ++
Sbjct: 253 AYEAALSLDATDLKAWTSLGQVYTKLREYDNAVRAFQMALKLNKTDSSVWKNIGDVLMLE 312
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++AL +Q + +++ S A+ +G L+ L ++K+A+
Sbjct: 313 KRYDEALAAYEQAIALNRMDSSAWIGKGTALNNLARYKEAL 353
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ ++G A +++ A + +D ++ DP +A + +G + Q++ E AI + A
Sbjct: 96 DYWYNKGNALLSKNLLNEAYAAYDVAIQLDPYDVQAWMAKGNVLSDQKQYEDAIRAYDAA 155
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ +P E W +G A EA+ AL+ + + + +G + +
Sbjct: 156 IQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQKDSKDSKAWYNKGNAQYNLGNLED 215
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ + + ++ AYT G+AL+ + Y A +A+ A+ LD L+AW L Q Y
Sbjct: 216 ALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAIDAYEAALSLDATDLKAWTSLGQVY 275
Query: 562 QDLANSEKALECLQQVLYIDK 582
L + A+ Q L ++K
Sbjct: 276 TKLREYDNAVRAFQMALKLNK 296
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
LI G Q + AIS F AI+ +PS AW +G + LG+ EAI A+
Sbjct: 30 LISDGNVLYSQGMYQEAISYFERAIEQDPSNAAAWYNKGVSLYKLGQVDEAIASYEVAIG 89
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P ++D + +G N A ++LD + A+ G LS +Y+ A
Sbjct: 90 LDPRNSDYWYNKGNALLSKNLLNEAYAAYDVAIQLDPYDVQAWMAKGNVLSDQKQYEDAI 149
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
A+ AIQ+D + E W + + N ++A+ + L D + SKA++ +G +
Sbjct: 150 RAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQKDSKDSKAWYNKGNAQYN 209
Query: 598 LGQHKKAIK 606
LG + A+K
Sbjct: 210 LGNLEDALK 218
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +S G ++G Y AIS F++ +++DP A +G + +++ AI+ + A
Sbjct: 28 DDLISDGNVLYSQGMYQEAISYFERAIEQDPSNAAAWYNKGVSLYKLGQVDEAIASYEVA 87
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I +P + W +G A + EA A++ +P +G V K +
Sbjct: 88 IGLDPRNSDYWYNKGNALLSKNLLNEAYAAYDVAIQLDPYDVQAWMAKGNVLSDQKQYED 147
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ A +++D +N+ + G A + +K+A A+ A+Q D +AW +
Sbjct: 148 AIRAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQKDSKDSKAWYNKGNAQ 207
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L N E AL+ + L + + + AY +G+ L L ++ AI
Sbjct: 208 YNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAI 251
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G AQ N G A+ ++ L +P A +G A A + AI + A+ +
Sbjct: 202 NKGNAQYNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAIDAYEAALSLD 261
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +AW GQ L E A++ AL+ + + G V K ++ A+
Sbjct: 262 ATDLKAWTSLGQVYTKLREYDNAVRAFQMALKLNKTDSSVWKNIGDVLMLEKRYDEALAA 321
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L++ + SA+ G AL+++ YK+A A + F W L
Sbjct: 322 YEQAIALNRMDSSAWIGKGTALNNLARYKEALGVFEIACSMSPLFASGWVGKGNSLSGLG 381
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
++A + L +D R S+A
Sbjct: 382 QIQEADGAYEAALQLDPRNSQA 403
>gi|390337018|ref|XP_003724472.1| PREDICTED: uncharacterized protein LOC587791 isoform 1
[Strongylocentrotus purpuratus]
Length = 2128
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L AI +FT+ ++ +P EA+ +R + A GE + A++D +A PN + +R
Sbjct: 1244 DLTMAIMNFTQTVKLDPQDHEAFFKRAELYEARGEMLLALEDYREATRLMPNMTKAIMKR 1303
Query: 490 GIVNFKF-KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+ F K++ AA++D S + + N +TY G A + G Y +A AI LD
Sbjct: 1304 GLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDP 1363
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK--AYHLRGLLLHGLGQHKKAIK 606
N A+ H + A+ ++AL+ L + +D S A+ RG+L +G+H+ AI
Sbjct: 1364 NSSVAFYHRGCLLRK-AHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAIT 1422
Query: 607 DL 608
D
Sbjct: 1423 DF 1424
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AAI DF+E + P+ RG+A A G EA+ DLS A+ +PNS+ + RG +
Sbjct: 1316 AAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNSSVAFYHRGCL 1375
Query: 493 NFKFKDFNAAVEDLSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A++DLS + LD N A+ + G+ ++G ++ A ++LDR
Sbjct: 1376 -LRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAITDFDNVLKLDRTI 1434
Query: 551 LEAWGHLTQFYQ-DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A +L Y L N KA++ + +D + +A RG H + + K A+KD +
Sbjct: 1435 AAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELKNALKDFT 1494
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A F+ +K +P YPEA RG R + + I DF A+ NP +A+ R
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKG-ILDFNRALALNPKLFQAYLSRAAYY 1692
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G + I + ++A+ +PNS RG + + A++DL ++LD A
Sbjct: 1693 GQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLA 1752
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y + + G+Y+KA+ + + L D N L+ + Y + + A + Q +
Sbjct: 1753 YFNRAVCYHTTGDYQKAQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAV 1812
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ R K H GL H L + + A+ SS
Sbjct: 1813 EVSPRDPKIRHTLGLCCHKLNRLEDAVAIYSSA 1845
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 21/240 (8%)
Query: 383 FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+L R IA VN G Y AI F +K DP Y A++ RG A EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ DFT AI P + RGQ + A + A E ++ V
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQILLRMKNLELASFCVLHAAELAHGLGSSPTQQAAV 1547
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
+++ A+E LS+ VK+ Y LG +Y+ A ++ KA+ L + +
Sbjct: 1548 QSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALDLMKPWQE 1606
Query: 551 --------LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E + + + ++ N KA E + I+ + +AY+ RGL L Q K
Sbjct: 1607 RQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAK 1666
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 438 FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
TE + ++P RRG LG+ +A DL++A+ EP D R ++
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+EDL++ +K++KE+ AY +S+G+ A + ++LD EA+
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLS 609
+ Y+ ALE ++ + +KA RGL + ++ AIKD S
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFS 1322
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA + TR+ ++K I +DF LSR G+Y+ I +Q
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P A + RG + + AI D +AI+ + + A+ R G+ +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768
Query: 468 AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A +D L + NS +L RG++ F KD+ A +D S V++ + LGL
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A + A++ + F++A+ + D + + L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG F ++ E+A+ DF AI+ + S A+ + + ++A+Q K
Sbjct: 1958 ELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKT 2017
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + L R I +D A+ED VKL + Y G +S+ Y+
Sbjct: 2018 LELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQL 2077
Query: 536 AEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALEC 573
AE+ + +A+ L + E G L + + +A+ ++A+E
Sbjct: 2078 AEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEI 2122
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
A++I+ L+ +P + +A +GRG A R +QR +
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897
Query: 432 ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+ A + FT ++ NP+ A + R + + A+ D++ AL S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A++ RG+VN +D +A+ D A +K DK AY S ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++L+ + A + +S+ ALE + + + + Y RG L L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076
Query: 603 KAIKDLS 609
A KD S
Sbjct: 2077 LAEKDYS 2083
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS + V+ RG+ + SA+ F +K+D Y A R+
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + ++ N S A R + +S A++D KA++ P SA + RG
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
+ K + A +D S + L ++ + LG +I +YK+A E K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125
>gi|365844927|ref|ZP_09385736.1| tetratricopeptide repeat protein [Flavonifractor plautii ATCC
29863]
gi|364562521|gb|EHM40361.1| tetratricopeptide repeat protein [Flavonifractor plautii ATCC
29863]
Length = 627
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG F + A+ DFT+A + + + +G LGE+ AI++ S++
Sbjct: 349 EAYWERGKLYYFANDYAQALEDFTKAKELGMEDSKLYWYKGFCYRRLGETELAIREYSRS 408
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + S ++ RG+ K ++ AV D + +KL +K Y G A ++ EYK+
Sbjct: 409 LELKETS-EVYRNRGLCFTTVKLYDKAVLDFTRAIKLPPGDKRLYRERGSAYQALEEYKR 467
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A+ + KA++L+ E + L + L ++AL+ Q+ + ID +++AY+ RG++
Sbjct: 468 AQADYEKALELEPADAELYTTLGDVQERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVY 527
Query: 596 -------HGLGQHKKAIK 606
L H+KA+K
Sbjct: 528 LSQMETEKALADHRKAVK 545
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
LKETS E RN+ C T + Y A+ F + +K P
Sbjct: 411 LKETS-EVYRNRGLCFTTVKL---------------------YDKAVLDFTRAIKLPPGD 448
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
RG+A E + A +D+ +A++ P+ E + G + LGE EA+Q K
Sbjct: 449 KRLYRERGSAYQALEEYKRAQADYEKALELEPADAELYTTLGDVQERLGEVQEALQSYQK 508
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++ +PN A + RG+V + A+ D VKL + + +G+ L+ + Y
Sbjct: 509 AIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAGDRALYHVNVGIVLNRLERYS 568
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+A + KAI+LD + +A+ Y+ L +EKA
Sbjct: 569 EAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTEKA 604
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ DFT AI+ P ++ RG A AL E A D KALE EP A++ G V
Sbjct: 434 AVLDFTRAIKLPPGDKRLYRERGSAYQALEEYKRAQADYEKALELEPADAELYTTLGDVQ 493
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFL 551
+ + A++ +++D AY G+ S E +KA H KA++L DR
Sbjct: 494 ERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAGDRALY 553
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ L +A+ + + +D ++KAY +R GL Q +KA +D
Sbjct: 554 HV--NVGIVLNRLERYSEAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTEKAERD 607
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 6 LLDSRYRLNKTHKTICEIDELVRVDSVMASAITAR--IELAKL---CSLRNWSKAIRILD 60
L D + RL + + + + +++D A A R + L+++ +L + KA+++
Sbjct: 489 LGDVQERLGEVQEALQSYQKAIQIDPNYARAYNNRGVVYLSQMETEKALADHRKAVKLAG 548
Query: 61 SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKE 120
+ + NR LE + + C+KA++LDP +AY ++ A+ L + E
Sbjct: 549 DRALYHVNVGIVLNR------LERYSEAVTSCNKAIKLDPGYAKAYDIRADAYEGLEQTE 602
Query: 121 EALSVWE 127
+A WE
Sbjct: 603 KAERDWE 609
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +G +AI+ +++ L+ P YPEA G A Q +L AAI+ + A+Q NP+
Sbjct: 106 GLALKEQGDLTAAIASYNKALQLRPNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPN 165
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E G G+ AI +AL+ +PN + + GI + D AA+ +
Sbjct: 166 DPETHNNLGVVLKKQGDPTAAITSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYN 225
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L + Y LG AL G+ A ++ KA+QL NF +A
Sbjct: 226 KALQLKPNDADTYNNLGNALKEQGDLTAAIDSFNKALQLKPNFPDA 271
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+++ I + + L+ P YPEA G A Q +L AAI+ + +A+Q P+ EA
Sbjct: 78 QGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHN 137
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A G+ AI + AL+ PN + + G+V K D AA+ ++L
Sbjct: 138 NLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVLKKQGDPTAAITSYHQALQLQ 197
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
A+ LG+A G+ A ++ KA+QL N + + +L ++ + A++
Sbjct: 198 PNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDADTYNNLGNALKEQGDLTAAIDS 257
Query: 574 LQQVLYIDKRFSKA 587
+ L + F A
Sbjct: 258 FNKALQLKPNFPDA 271
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ +G +AI+ + Q L+ P YPEA G A Q +L AAI+ + +A+Q P+
Sbjct: 174 GVVLKKQGDPTAAITSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPN 233
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G A G+ AI +KAL+ +PN D + D+ + E
Sbjct: 234 DADTYNNLGNALKEQGDLTAAIDSFNKALQLKPNFPDAQWNSALTMLLGGDYKSGWEKYE 293
Query: 508 ACVKLDKENKSAY 520
K +KE+ +
Sbjct: 294 WRTKGEKEHAKPH 306
>gi|411119937|ref|ZP_11392313.1| Tfp pilus assembly protein PilF [Oscillatoriales cyanobacterium
JSC-12]
gi|410710093|gb|EKQ67604.1| Tfp pilus assembly protein PilF [Oscillatoriales cyanobacterium
JSC-12]
Length = 782
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R + + G A A++ + +L +P AL RG R + E AI++F A+Q
Sbjct: 583 FNRAVTRYELGDRAGALADYTAVLAINPDDDVALNNRGLVRYDLGDKEGAIAEFEAAVQH 642
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG R+ LG+ AI D + AL+ P A RG+ + +D A++
Sbjct: 643 NPQNFIAYSNRGYIRSELGDKEGAIADYTTALKLNPAYAVAYFYRGLARTRLQDKLGAIQ 702
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIG 531
D + + L+ ++ SAY Y GLA + +G
Sbjct: 703 DYTEVIHLNPQDASAYFYRGLANAKVG 729
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + G AI+ F+ ++ +P A RG R+ + E AI+D+T A++ N
Sbjct: 618 NRGLVRYDLGDKEGAIAEFEAAVQHNPQNFIAYSNRGYIRSELGDKEGAIADYTTALKLN 677
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR L + + AIQD ++ + P A RG+ N K A+ D
Sbjct: 678 PAYAVAYFYRGLARTRLQDKLGAIQDYTEVIHLNPQDASAYFYRGLANAKVGYSMDALRD 737
Query: 506 LSACVKL 512
L +L
Sbjct: 738 LRQAAQL 744
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 445 NPSAGE----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
NP E A+ R R LG+ A+ D + L P+ L+ RG+V + D
Sbjct: 571 NPVLDEDDAVAYFNRAVTRYELGDRAGALADYTAVLAINPDDDVALNNRGLVRYDLGDKE 630
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + A V+ + +N AY+ G S +G+ + A + A++L+ + A+ F
Sbjct: 631 GAIAEFEAAVQHNPQNFIAYSNRGYIRSELGDKEGAIADYTTALKLNPAYAVAY-----F 685
Query: 561 YQDLANSE-----KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
Y+ LA + A++ +V++++ + + AY RGL +G A++DL ++
Sbjct: 686 YRGLARTRLQDKLGAIQDYTEVIHLNPQDASAYFYRGLANAKVGYSMDALRDLRQAAQLF 745
Query: 616 M 616
M
Sbjct: 746 M 746
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 388 GIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + + I FD +L ED A R R + A++D+T + NP
Sbjct: 553 GVRTTDPDIIHTLIDRFDNPVLDEDDAV--AYFNRAVTRYELGDRAGALADYTAVLAINP 610
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A RG R LG+ AI + A++ P + RG + + D A+ D
Sbjct: 611 DDDVALNNRGLVRYDLGDKEGAIAEFEAAVQHNPQNFIAYSNRGYIRSELGDKEGAIADY 670
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ AY Y GLA + + + A + + + I L+ A+ FY+ LAN
Sbjct: 671 TTALKLNPAYAVAYFYRGLARTRLQDKLGAIQDYTEVIHLNPQDASAY-----FYRGLAN 725
Query: 567 -----SEKALECLQQV--LYIDKRFSKAYH 589
S AL L+Q L++D+ S Y
Sbjct: 726 AKVGYSMDALRDLRQAAQLFMDQGDSANYQ 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI+ + LK +P Y A RG AR ++ AI D+TE I N
Sbjct: 652 NRGYIRSELGDKEGAIADYTTALKLNPAYAVAYFYRGLARTRLQDKLGAIQDYTEVIHLN 711
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P A+ RG A A +G S++A++DL +A + + D + + VN
Sbjct: 712 PQDASAYFYRGLANAKVGYSMDALRDLRQAAQLFMDQGDSANYQQTVN 759
>gi|390337020|ref|XP_792593.3| PREDICTED: uncharacterized protein LOC587791 isoform 2
[Strongylocentrotus purpuratus]
Length = 2128
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L AI +FT+ ++ +P EA+ +R + A GE + A++D +A PN + +R
Sbjct: 1244 DLTMAIMNFTQTVKLDPQDHEAFFKRAELYEARGEMLLALEDYREATRLMPNMTKAIMKR 1303
Query: 490 GIVNFKF-KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+ F K++ AA++D S + + N +TY G A + G Y +A AI LD
Sbjct: 1304 GLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDP 1363
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK--AYHLRGLLLHGLGQHKKAIK 606
N A+ H + A+ ++AL+ L + +D S A+ RG+L +G+H+ AI
Sbjct: 1364 NSSVAFYHRGCLLRK-AHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAIT 1422
Query: 607 DL 608
D
Sbjct: 1423 DF 1424
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AAI DF+E + P+ RG+A A G EA+ DLS A+ +PNS+ + RG +
Sbjct: 1316 AAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNSSVAFYHRGCL 1375
Query: 493 NFKFKDFNAAVEDLSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A++DLS + LD N A+ + G+ ++G ++ A ++LDR
Sbjct: 1376 -LRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAITDFDNVLKLDRTI 1434
Query: 551 LEAWGHLTQFYQ-DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A +L Y L N KA++ + +D + +A RG H + + K A+KD +
Sbjct: 1435 AAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELKNALKDFT 1494
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A F+ +K +P YPEA RG R + + I DF A+ NP +A+ R
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKG-ILDFNRALALNPKLFQAYLSRAAYY 1692
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G + I + ++A+ +PNS RG + + A++DL ++LD A
Sbjct: 1693 GQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLA 1752
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y + + G+Y+KA+ + + L D N L+ + Y + + A + Q +
Sbjct: 1753 YFNRAVCYHTTGDYQKAQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAV 1812
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ R K H GL H L + + A+ SS
Sbjct: 1813 EVSPRDPKIRHTLGLCCHKLNRLEDAVAIYSSA 1845
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 21/240 (8%)
Query: 383 FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+L R IA VN G Y AI F +K DP Y A++ RG A EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ DFT AI P + RGQ + A + A E ++ V
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQILLRMKNLELASFCVLHAAELAHGLGSSPTQQAAV 1547
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
+++ A+E LS+ VK+ Y LG +Y+ A ++ KA+ L + +
Sbjct: 1548 QSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALDLMKPWQE 1606
Query: 551 --------LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E + + + ++ N KA E + I+ + +AY+ RGL L Q K
Sbjct: 1607 RQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAK 1666
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 438 FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
TE + ++P RRG LG+ +A DL++A+ EP D R ++
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+EDL++ +K++KE+ AY +S+G+ A + ++LD EA+
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLS 609
+ Y+ ALE ++ + +KA RGL + ++ AIKD S
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFS 1322
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA + TR+ ++K I +DF LSR G+Y+ I +Q
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P A + RG + + AI D +AI+ + + A+ R G+ +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768
Query: 468 AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A +D L + NS +L RG++ F KD+ A +D S V++ + LGL
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A + A++ + F++A+ + D + + L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG F ++ E+A+ DF AI+ + S A+ + + ++A+Q K
Sbjct: 1958 ELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKT 2017
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + L R I +D A+ED VKL + Y G +S+ Y+
Sbjct: 2018 LELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQL 2077
Query: 536 AEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALEC 573
AE+ + +A+ L + E G L + + +A+ ++A+E
Sbjct: 2078 AEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEI 2122
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
A++I+ L+ +P + +A +GRG A R +QR +
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897
Query: 432 ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+ A + FT ++ NP+ A + R + + A+ D++ AL S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A++ RG+VN +D +A+ D A +K DK AY S ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++L+ + A + +S+ ALE + + + + Y RG L L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076
Query: 603 KAIKDLS 609
A KD S
Sbjct: 2077 LAEKDYS 2083
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS + V+ RG+ + SA+ F +K+D Y A R+
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + ++ N S A R + +S A++D KA++ P SA + RG
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
+ K + A +D S + L ++ + LG +I +YK+A E K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125
>gi|443320847|ref|ZP_21049923.1| tetratricopeptide repeat protein [Gloeocapsa sp. PCC 73106]
gi|442789431|gb|ELR99088.1| tetratricopeptide repeat protein [Gloeocapsa sp. PCC 73106]
Length = 208
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + G A+ D ++ALE P A++ + RG+V ++ + A+ED++ +KL
Sbjct: 24 QGVDKHKQGNPQGALIDFTQALEINPKDAEVYYNRGVVYYELDKYQLALEDINRSIKLKP 83
Query: 515 ENKSAYTYLGLALS-SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY GL LS S+ + + + + I+LD F A+ Y EKA +
Sbjct: 84 DYPEAYYLRGLILSRSLLDEEATMDDFTQTIKLDSRFAPAYFQRANLYYQQRELEKAFKD 143
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
V+ + ++ AY+ RGL+L+ +G AIKDL ++
Sbjct: 144 YTNVIDLASEYAHAYYNRGLVLYQIGDRSSAIKDLEQAAQ 183
Score = 50.1 bits (118), Expect = 0.004, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ + +G A+ F Q L+ +P E RG + + A+ D +I+
Sbjct: 22 LIQGVDKHKQGNPQGALIDFTQALEINPKDAEVYYNRGVVYYELDKYQLALEDINRSIKL 81
Query: 445 NPSAGEAWKRRG--QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P EA+ RG +R+ L E + D ++ ++ + A +R + ++ ++ A
Sbjct: 82 KPDYPEAYYLRGLILSRSLLDEEA-TMDDFTQTIKLDSRFAPAYFQRANLYYQQRELEKA 140
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+D + + L E AY GL L IG+ A + +A QL
Sbjct: 141 FKDYTNVIDLASEYAHAYYNRGLVLYQIGDRSSAIKDLEQAAQL 184
>gi|434403706|ref|YP_007146591.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428257961|gb|AFZ23911.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 422
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + Y AI+ FDQ ++E+P++ A + RG A + A+SD+TEA++ N
Sbjct: 7 NRGLEKAKQKDYDGAIAEFDQAIRENPVFDTAYLQRGLAYYESGAILQAVSDYTEALKLN 66
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA+ R AR L A++D+ KA++ N A RG+V K A+ +
Sbjct: 67 SQNVEAYYYRALARVDLKNLPGALEDVEKAIKLNLNYAAAYSLRGVVRRKEGYIQDAIAN 126
Query: 506 LSACVKL-----DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-HLTQ 559
+L DKEN L L +I + + E+ I + + G + TQ
Sbjct: 127 FKKAAELYLQEKDKEN------CRLCLDNIKQLQPPEKPAPTPITATVATIRSTGDYFTQ 180
Query: 560 FYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ ++ +A+ L VL D + ++AY RG++ +G +++AI D +S
Sbjct: 181 LLDKAEKGDTREAIADLNWVLQADPQDAQAYCCRGVVRCKMGNYREAIADFNSA 234
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ + +L+ DP +A RG R AI+DF A+Q + ++
Sbjct: 187 KGDTREAIADLNWVLQADPQDAQAYCCRGVVRCKMGNYREAIADFNSALQLKFTDAIVYR 246
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+AR+ LG+ + AI D ++A+E +P+ + RG V D+ A++D + ++++
Sbjct: 247 NRGKARSQLGDHLGAIADFNQAIEIQPDDTLVYIARGNVFRAMGDYLGAMKDYTQALQIN 306
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ AY G+A + + E +KA KA + +D N ++ L
Sbjct: 307 ADDAQAYYNRGIAYTFLEELQKAIADFQKA-----------ASIFCLQEDWDNYQQVLTS 355
Query: 574 LQQVLYIDKRFSKAYH--LRGLLLHGLGQHKKAIKDLSSGSRTMMPHL 619
L ++ +KA + LR LL +G H + + L R P +
Sbjct: 356 LNKIQSSSPESTKATYNTLRQRLLSMVGGHWEIAQRLIRQQRDFQPGM 403
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
D + RG+ K KD++ A+ + ++ + +AY GLA G +A + +A
Sbjct: 3 DEFYNRGLEKAKQKDYDGAIAEFDQAIRENPVFDTAYLQRGLAYYESGAILQAVSDYTEA 62
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L+ +EA+ + DL N ALE +++ + ++ ++ AY LRG++ G +
Sbjct: 63 LKLNSQNVEAYYYRALARVDLKNLPGALEDVEKAIKLNLNYAAAYSLRGVVRRKEGYIQD 122
Query: 604 AIKDLSSGSRTMM 616
AI + + +
Sbjct: 123 AIANFKKAAELYL 135
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 99/263 (37%), Gaps = 36/263 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A G A+S + + LK + EA R AR + L A+ D +AI+
Sbjct: 40 LQRGLAYYESGAILQAVSDYTEALKLNSQNVEAYYYRALARVDLKNLPGALEDVEKAIKL 99
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-------------------------- 478
N + A+ RG R G +AI + KA E
Sbjct: 100 NLNYAAAYSLRGVVRRKEGYIQDAIANFKKAAELYLQEKDKENCRLCLDNIKQLQPPEKP 159
Query: 479 --EPNSADILHERGIVNFKFK--------DFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
P +A + R ++ + D A+ DL+ ++ D ++ AY G+
Sbjct: 160 APTPITATVATIRSTGDYFTQLLDKAEKGDTREAIADLNWVLQADPQDAQAYCCRGVVRC 219
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G Y++A A+QL + + + L + A+ Q + I + Y
Sbjct: 220 KMGNYREAIADFNSALQLKFTDAIVYRNRGKARSQLGDHLGAIADFNQAIEIQPDDTLVY 279
Query: 589 HLRGLLLHGLGQHKKAIKDLSSG 611
RG + +G + A+KD +
Sbjct: 280 IARGNVFRAMGDYLGAMKDYTQA 302
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + AI+ F+Q ++ P I RG + A+ D+T+A+Q N
Sbjct: 247 NRGKARSQLGDHLGAIADFNQAIEIQPDDTLVYIARGNVFRAMGDYLGAMKDYTQALQIN 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A+ RG A L E +AI D KA
Sbjct: 307 ADDAQAYYNRGIAYTFLEELQKAIADFQKA 336
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 16 THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDIC-N 74
T + I +++ +++ D A A R + C + N+ +AI +S L + + N
Sbjct: 190 TREAIADLNWVLQADPQDAQAYCCRGVVR--CKMGNYREAIADFNSALQLKFTDAIVYRN 247
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
R SQL H I D ++A+++ P YI +G F A+G A+ K Y AL
Sbjct: 248 RGKARSQLGDHLGAIADFNQAIEIQPDDTLVYIARGNVFRAMGDYLGAM----KDYTQAL 303
Query: 135 HQSADLKQ 142
+AD Q
Sbjct: 304 QINADDAQ 311
>gi|376005179|ref|ZP_09782715.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|375326386|emb|CCE18468.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
Length = 291
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ ++S+D L R A G++A A + + +I+ P P RG R Q L
Sbjct: 53 VAEISTLSLDELLERAFATSQAGRFAEAENYWTEIINRYPDNPAMWSNRGNIRVSQNRLT 112
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+ AI+ P+A + + RG A LG +AI D ++ LE P+ A + RG
Sbjct: 113 EAIGDYNRAIELAPTAADPYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNA 172
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+++ AA+ D +LD A LAL GE K+A
Sbjct: 173 EAGQENWEAAIADYFQAAELDPNYAFARANYALALYQTGETKEA 216
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TE I P W RG R + EAI D ++A+E P +AD RG+
Sbjct: 84 WTEIINRYPDNPAMWSNRGNIRVSQNRLTEAIGDYNRAIELAPTAADPYLNRGVAYEGLG 143
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ A+ D + ++L + AY G A + ++ A + +A +LD N+
Sbjct: 144 RWSDAIADYNRTLELSPSDAIAYNNRGNAEAGQENWEAAIADYFQAAELDPNY 196
>gi|325959264|ref|YP_004290730.1| hypothetical protein Metbo_1528 [Methanobacterium sp. AL-21]
gi|325330696|gb|ADZ09758.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 329
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G+ GKY+ AI F+ +++ +P ++L +G + + AI+ + + ++
Sbjct: 149 INKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCYNKVLER 208
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P ++W +G +A LG+ EA++ KALE P AD + + ++
Sbjct: 209 DPKNADSWNNKGATQAMLGKKDEALKSYDKALEINPKEADTWNNKALI------------ 256
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
LS+ +Y+K+ E + +I++D NF +AW + + L
Sbjct: 257 ----------------------LSNQEKYQKSIELYDISIEIDPNFNDAWHNKGVALKAL 294
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
E+AL+C +VL +D KA L+ +L
Sbjct: 295 GKHEEALKCFDKVLELDPTDEKAKRLKNEIL 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 106/220 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ N K++ AI ++ +K D + I +G + AI + ++ +P
Sbjct: 83 KGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKVLELDP 142
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G LG+ EAI+ + P + D L ++G++ K++ A+
Sbjct: 143 QNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCY 202
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ D +N ++ G + +G+ +A +++ KA++++ + W + +
Sbjct: 203 NKVLERDPKNADSWNNKGATQAMLGKKDEALKSYDKALEINPKEADTWNNKALILSNQEK 262
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+K++E + ID F+ A+H +G+ L LG+H++A+K
Sbjct: 263 YQKSIELYDISIEIDPNFNDAWHNKGVALKALGKHEEALK 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG Y A+ D+ L+ D A I G + AI + +A++ NP W
Sbjct: 22 EGNYQEALEKNDKFLEIDSKNETAWIYNGLIYEKLEQYPEAIESYDKALEINPKNALTWF 81
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+G L + EAI+ + +++++ +G++ + ++ A+E + ++LD
Sbjct: 82 YKGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKVLELD 141
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+N++A+ GL L +G+Y +A E I+++ L++ +L N ++A+ C
Sbjct: 142 PQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINC 201
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+VL D + + +++ +G LG+ +A+K
Sbjct: 202 YNKVLERDPKNADSWNNKGATQAMLGKKDEALK 234
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 59/123 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + ++D +G+ N Y AI+ ++++L+ DP ++ +G +A
Sbjct: 167 CFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCYNKVLERDPKNADSWNNKGATQAML 226
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ + +A++ NP + W + + + ++I+ ++E +PN D H
Sbjct: 227 GKKDEALKSYDKALEINPKEADTWNNKALILSNQEKYQKSIELYDISIEIDPNFNDAWHN 286
Query: 489 RGI 491
+G+
Sbjct: 287 KGV 289
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 34/147 (23%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------- 546
FK ++ A+E +++D +N++A+ Y GL + +Y +A E++ KA+++
Sbjct: 20 FKEGNYQEALEKNDKFLEIDSKNETAWIYNGLIYEKLEQYPEAIESYDKALEINPKNALT 79
Query: 547 ---------------------------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
D + +W + +L N ++A+EC +VL
Sbjct: 80 WFYKGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKVLE 139
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+D + A+ +GL+L LG++ +AI+
Sbjct: 140 LDPQNETAWINKGLILEELGKYSEAIE 166
>gi|434387380|ref|YP_007097991.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428018370|gb|AFY94464.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 539
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S VD ++ + + ++G Y ++ +Q + D + RG A+ + +A I
Sbjct: 242 TRSKPVDDLVASALQKESKGDYRGMLADLNQAIFLDSQNAQLYYNRGVAKTLLKNRDA-I 300
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF AI N + + + RG ++ LG+ AIQD ++A+ + +A H RG
Sbjct: 301 EDFNRAIALNLNDSDVYNNRGYIKSDLGDKKGAIQDFNRAISIDATNARAYHNRGNAKAA 360
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ +A+ED + + LD AY + +G+ K +AI + N++EA
Sbjct: 361 LNNPKSALEDFNRAISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHE 420
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+L +L +S+ A+E + + ++ + + Y RG+ + K AI+D
Sbjct: 421 NLGMAKSELGDSKGAIESFNRAIALNPKNANNYSSRGIARSKVADDKGAIEDF 473
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG + + G AI F++ + D A RG A+A ++A+ DF A
Sbjct: 315 DVYNNRGYIKSDLGDKKGAIQDFNRAISIDATNARAYHNRGNAKAALNNPKSALEDFNRA 374
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + + A+ R +A LG++ + DL +A+ PN + G+ + D
Sbjct: 375 ISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHENLGMAKSELGDSKG 434
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E + + L+ +N + Y+ G+A S + + K A E +AI LD N +A+ +
Sbjct: 435 AIESFNRAIALNPKNANNYSSRGIARSKVADDKGAIEDFDRAIALDANQAKAYTNRGLLK 494
Query: 562 QDLANSEKALECLQQ 576
L + + AL L++
Sbjct: 495 AKLGDKKAALLDLKK 509
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 423 TARAFQRE----LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
A A Q+E ++D +AI + + + RG A+ L ++ +AI+D ++A+
Sbjct: 251 VASALQKESKGDYRGMLADLNQAIFLDSQNAQLYYNRGVAKTLL-KNRDAIEDFNRAIAL 309
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
N +D+ + RG + D A++D + + +D N AY G A +++ K A E
Sbjct: 310 NLNDSDVYNNRGYIKSDLGDKKGAIQDFNRAISIDATNARAYHNRGNAKAALNNPKSALE 369
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+AI LD A+ + + L +++ L L++ + I + +A+ G+ L
Sbjct: 370 DFNRAISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHENLGMAKSEL 429
Query: 599 GQHKKAIKDLS 609
G K AI+ +
Sbjct: 430 GDSKGAIESFN 440
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 317 SLNDSNT-NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
+LNDS+ N+ Y KS + D K + +R+ + T+ A N+ ++
Sbjct: 310 NLNDSDVYNNRGYIKSDLGDKKGAIQDFNRAI------SIDATNARAYHNRGNAKAALNN 363
Query: 376 SKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
KS DF L+R + G ++ ++ + P Y EA G
Sbjct: 364 PKSALEDFNRAISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHENLG 423
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A++ + + AI F AI NP + RG AR+ + + AI+D +A+ + N
Sbjct: 424 MAKSELGDSKGAIESFNRAIALNPKNANNYSSRGIARSKVADDKGAIEDFDRAIALDANQ 483
Query: 483 ADILHERGIVNFKFKDFNAAVEDL 506
A RG++ K D AA+ DL
Sbjct: 484 AKAYTNRGLLKAKLGDKKAALLDL 507
>gi|124006312|ref|ZP_01691147.1| TPR repeat [Microscilla marina ATCC 23134]
gi|123988236|gb|EAY27894.1| TPR repeat [Microscilla marina ATCC 23134]
Length = 403
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ KY AI+ FD+++K + + RG R + + A++DF +AI+
Sbjct: 203 NRGLTYKKIYKYKEAIADFDKVIKMGAKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQ 262
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG A+ L + AI D SKA+E +PN++ + RG + + +DF AA+ D
Sbjct: 263 GDDVLVYNGRGYAKQNLRDDKGAIADFSKAIELDPNNSLGYYSRGGLRLQAQDFKAALAD 322
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
++L +++ AY G +G+YK A +AI+L + + G++ Q
Sbjct: 323 FDKIIQLKPKDEKAYLTRGNIKFKLGDYKGALADFDQAIKLAPKSRKGYFMRGNVKQKLG 382
Query: 563 DLANSE 568
DL +E
Sbjct: 383 DLEGAE 388
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 37/246 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS- 444
+RGIA++ Y A + F+ IL+ +P L GT + Q++ + AI F+ A+++
Sbjct: 64 ARGIAKMGLKDYKGASNDFNAILQLNPRDARTLNNLGTVQMIQKDYKGAIQSFSRALKTR 123
Query: 445 --------------------------------NPSAGEAWKR----RGQARAALGESVEA 468
P+ G R RG AR LG A
Sbjct: 124 RHPMLFFNRGISHYQLKQYKQAVKDFDQGLAMRPTKGNLPIRLHNNRGNARDMLGNHKGA 183
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D + + P + + L+ RG+ K + A+ D +K+ + K Y + G+ +
Sbjct: 184 IADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAIADFDKVIKMGAKFKDVYYHRGMCRN 243
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +YK A KAI+L + + + Q+L + + A+ + + +D S Y
Sbjct: 244 ATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQNLRDDKGAIADFSKAIELDPNNSLGY 303
Query: 589 HLRGLL 594
+ RG L
Sbjct: 304 YSRGGL 309
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+ + Y A++ F++ ++ GRG A+ R+ + AI+DF++A
Sbjct: 233 DVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQNLRDDKGAIADFSKA 292
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ +P+ + RG R + A+ D K ++ +P RG + FK D+
Sbjct: 293 IELDPNNSLGYYSRGGLRLQAQDFKAALADFDKIIQLKPKDEKAYLTRGNIKFKLGDYKG 352
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+ D +KL +++ Y G +G+ + AE +KA Q+
Sbjct: 353 ALADFDQAIKLAPKSRKGYFMRGNVKQKLGDLEGAEADWMKAGQV 397
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + AI+ + ++ + P AL RG + + AI+DF + I+
Sbjct: 169 NRGNARDMLGNHKGAIADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAIADFDKVIKMG 228
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + RG R A + A+ D +KA+E + + + + RG +D A+ D
Sbjct: 229 AKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQNLRDDKGAIAD 288
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD N Y G ++K A K IQL +A+ L
Sbjct: 289 FSKAIELDPNNSLGYYSRGGLRLQAQDFKAALADFDKIIQLKPKDEKAYLTRGNIKFKLG 348
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ + AL Q + + + K Y +RG + LG
Sbjct: 349 DYKGALADFDQAIKLAPKSRKGYFMRGNVKQKLG 382
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F++ L+ + + A+ RG A+ ++ + A +DF +Q NP G
Sbjct: 41 YKKAIEYFNKALEVNKVDISAMGARGIAKMGLKDYKGASNDFNAILQLNPRDARTLNNLG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ + AIQ S+AL+ + + RGI +++ K + AV+D + +
Sbjct: 101 TVQMIQKDYKGAIQSFSRALKTRRHPM-LFFNRGISHYQLKQYKQAVKDFDQGLAMRPTK 159
Query: 517 KSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ L G A +G +K A + I A + Y+ + ++A+
Sbjct: 160 GNLPIRLHNNRGNARDMLGNHKGAIADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAIA 219
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+V+ + +F Y+ RG+ + +K A+ D +
Sbjct: 220 DFDKVIKMGAKFKDVYYHRGMCRNATEDYKGAVADFN 256
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 441 AIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
A +P A E A KR+ +A+ E +AI+ +KALE + RGI K
Sbjct: 18 AFGQDPRAKEFFVAGKRKLRAK----EYKKAIEYFNKALEVNKVDISAMGARGIAKMGLK 73
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ A D +A ++L+ + LG +YK A ++ +A++ R+ + +
Sbjct: 74 DYKGASNDFNAILQLNPRDARTLNNLGTVQMIQKDYKGAIQSFSRALKTRRHPMLFFNRG 133
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKA------YHLRGLLLHGLGQHKKAIKDLSS 610
YQ L ++A++ Q L + R +K ++ RG LG HK AI D ++
Sbjct: 134 ISHYQ-LKQYKQAVKDFDQGLAM--RPTKGNLPIRLHNNRGNARDMLGNHKGAIADYTA 189
>gi|159026574|emb|CAO86506.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 447
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G N G+Y A+S +++ ++ P Y A +G A E A+S + EAI+
Sbjct: 45 NKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLK 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A LG EA+ +A+ +P+ H +G + + E
Sbjct: 105 PDYDYAWNGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKG---NQLGNLGRYEEA 161
Query: 506 LSAC---VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
LSAC ++L + + A+ G L+++G Y++A A +AI+L ++ AW
Sbjct: 162 LSACEEAIRLKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLA 221
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+AL ++ + + + A+ ++G L LG++++A+
Sbjct: 222 NLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEAL 264
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G N G+Y A+S +++ ++ P Y A +G A E A+S + EAI+
Sbjct: 10 VGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRL 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW +G A LG EA+ +A+ +P+ + +G + A+
Sbjct: 70 KPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALS 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L + ++A+ G L ++G Y++A A +AI+L ++ AW +L
Sbjct: 130 AYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAVKGNQLANL 189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL ++ + + + A+ ++G L LG++++A+
Sbjct: 190 GRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEAL 230
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P Y A +G+G A E A+S + EAI+ P AW +G A LG EA+
Sbjct: 3 PDYEAAWVGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSA 62
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+A+ +P+ H +G + A+ ++L + A+ G L+++G
Sbjct: 63 YEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLG 122
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y++A A+ +AI+L ++ AW + +L E+AL ++ + + + A+ ++
Sbjct: 123 RYEEALSAYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAVK 182
Query: 592 GLLLHGLGQHKKAI 605
G L LG++++A+
Sbjct: 183 GNQLANLGRYEEAL 196
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 6/223 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G N G+Y A+S + + ++ P Y A G+G A E A+S + EAI+
Sbjct: 79 NKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALSAYEEAIRLK 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G LG EA+ +A+ +P D + + + E
Sbjct: 139 PDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKP---DYELAWAVKGNQLANLGRYEEA 195
Query: 506 LSAC---VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
LSAC ++L + + A+ G L+++G Y++A A +AI+L ++ AW
Sbjct: 196 LSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLA 255
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+AL ++ + + + A+ +G L L ++++AI
Sbjct: 256 NLGRYEEALSACEEAIRLKPDYEDAWLGKGYQLGNLYRYEEAI 298
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 379 ISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ D+ L+ +G N G+Y A+S ++ ++ P Y A +G A E A+
Sbjct: 171 LKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEAL 230
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S EAI+ P AW +G A LG EA+ +A+ +P+ D +G
Sbjct: 231 SACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEDAWLGKGYQLGN 290
Query: 496 FKDFNAAVEDLSACVKLDKENKSA 519
+ A+ +KL +N A
Sbjct: 291 LYRYEEAIAAYDEVIKLKVDNIEA 314
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G N G+Y A+S ++ ++ P Y A +G A E A+S EAI+ P
Sbjct: 216 KGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKP 275
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-------KDF 499
+AW +G L EAI + ++ + ++ + ++ + ++ K + F
Sbjct: 276 DYEDAWLGKGYQLGNLYRYEEAIAAYDEVIKLKVDNIEAMYRKAMILKKLDHQDLANQQF 335
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ VE D + + +L+ +G+Y+ E+ KAI + N+ +L
Sbjct: 336 HLIVETCQQYKNKDNQTIDCWNVYAASLTCLGQYEDVEQILQKAIASNPNYPPTNYNLAC 395
Query: 560 FYQDLANSEKALECLQQVL 578
+Y N A+E L + +
Sbjct: 396 YYAIQDNIPLAVEYLAKAI 414
>gi|218247729|ref|YP_002373100.1| hypothetical protein PCC8801_2948 [Cyanothece sp. PCC 8801]
gi|218168207|gb|ACK66944.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 249
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y AI+ F + LK +P A RG A + + + A++DF++++
Sbjct: 64 VEQGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLIL 123
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P EA+ RG LG+ EAI + +AL+ PN A + G+ + A +
Sbjct: 124 DPKMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQK 183
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D S + +D + AY GLA S +G+ KKA KA ++
Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 88/163 (53%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G ++ Q + + AI+DFTEA+++NP+ A+ RG A + LG+ A+ D S++L
Sbjct: 63 LVEQGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLI 122
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + D A+ + +KL+ + A+ LGLA ++G+ A+
Sbjct: 123 LDPKMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ 182
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ +AI +D + EA+ + + DL ++KA Q+ I
Sbjct: 183 KDFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G ++ G+ AI D ++AL+ PN + + RG F+ A+ D S + LD
Sbjct: 66 QGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G +G+ K+A +L+A++L+ N A +L Y +L ++ A +
Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQKDF 185
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + ID ++ +AY RGL LGQ KKA D +
Sbjct: 186 SEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAA 223
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
T K+ ++ +RG A N GK+ A++ F Q L DP EA + RG
Sbjct: 83 FTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLILDPKMVEAYVNRGNVYLQLG 142
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+++ EA++ NP+ A G A LG++ A +D S+A+ +P + R
Sbjct: 143 DDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQKDFSEAIIIDPQYGEAYFNR 202
Query: 490 GIV 492
G+
Sbjct: 203 GLA 205
>gi|291572031|dbj|BAI94303.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 265
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--RELEAAISDFTEAI 442
RG+A+ G AI+ F Q ++ + Y A RG R F+ L AI+DFT+AI
Sbjct: 46 FDRGVARYQRGDKQGAIADFTQAIRLNRNYALAYYNRGVVR-FKSGNNLTEAIADFTQAI 104
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNA 501
+ NP +A+ R AR + + AI D+++ + +P+ + RG++ + KD+
Sbjct: 105 RLNPEYVDAYYNRAIARVKVQQYWPAIDDITQVIRLDPSHDRAFYLRGLIYSENLKDYQT 164
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ D + ++L+ N + Y G A IG+ ++A + + KAI+++ + E + +
Sbjct: 165 GINDFTEAIRLNPGNPAPYFKRGNARYRIGDRERAIDDYNKAIEINPSDPEPYYNRAISR 224
Query: 562 QDLANSEKALECLQQV--LYID 581
+ + + A+ LQ+ LY+D
Sbjct: 225 YQIGDRQGAIFDLQKSADLYMD 246
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
VD +R IA+V +Y AI Q+++ DP + A RG + ++ + I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDITQVIRLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ NP + +RG AR +G+ AI D +KA+E P+ + + R I ++ D
Sbjct: 171 EAIRLNPGNPAPYFKRGNARYRIGDRERAIDDYNKAIEINPSDPEPYYNRAISRYQIGDR 230
Query: 500 NAAVEDL--SACVKLDKENKSAY 520
A+ DL SA + +D N Y
Sbjct: 231 QGAIFDLQKSADLYMDLGNFEKY 253
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-FKDFNAAVEDLSACVKLD 513
RG AR G+ AI D ++A+ N A + RG+V FK + A+ D + ++L+
Sbjct: 48 RGVARYQRGDKQGAIADFTQAIRLNRNYALAYYNRGVVRFKSGNNLTEAIADFTQAIRLN 107
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E AY +A + +Y W A++
Sbjct: 108 PEYVDAYYNRAIARVKVQQY--------------------W--------------PAIDD 133
Query: 574 LQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLSSGSR 613
+ QV+ +D +A++LRGL+ L ++ I D + R
Sbjct: 134 ITQVIRLDPSHDRAFYLRGLIYSENLKDYQTGINDFTEAIR 174
>gi|422304230|ref|ZP_16391577.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9806]
gi|389790697|emb|CCI13448.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9806]
Length = 317
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++ + + + L GI Q+ G Y A+ F+Q ++ + A R + + ++ A
Sbjct: 42 AQPVHLSYWLRSGIEQLEAGNYQQALQDFNQSIERENNLALAYSNRCLTQIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALQNFTSAKADFNQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L ++++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYDRSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 GSRTM 615
G+ +
Sbjct: 282 GANHL 286
>gi|296127389|ref|YP_003634641.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 425
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G + AI+ +D+ ++ D Y E R + E A+ D+ + I+ P+
Sbjct: 42 GLSENALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPT 101
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EA++D+ KA+ + + D +R + K + A+ED
Sbjct: 102 HSKAYDDRGFAKGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYK 161
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---------LT 558
++LD ++ AY +G A SIG Y++A + KAI++ A+ + L
Sbjct: 162 KVLELDDKDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPA-SSAYAYNNRGVCKIGLK 220
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + + K+LE + ++ AY+ R + + LG ++ +IKD
Sbjct: 221 LYNEAILDINKSLEIYDE-------YTDAYNNRAIAKYNLGLYEDSIKDF 263
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ I+KS I D +R IA+ N G Y +I FD+ ++ + Y A RG ++
Sbjct: 225 AILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSK 284
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E AISDF A+ PS +A+ R A+ LG A++D EF+ N+ D
Sbjct: 285 SALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDA 344
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ + + + D+ A+++ ++L+ ++ AY G +G Y++A + + KAI+
Sbjct: 345 YYNKALSYYNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCMGLYQEALKDYDKAIE 404
Query: 546 LDRNF 550
++ ++
Sbjct: 405 INPDY 409
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ N G Y A+ D+ + D +A R + ++ AI D+ + ++ +
Sbjct: 109 RGFAKGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYKKVLELDD 168
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAVED 505
A+ G A+ ++G EAI +KA+E P +SA + RG+ K +N A+ D
Sbjct: 169 KDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGLKLYNEAILD 228
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ +++ E AY +A ++G Y+ + + KAI+L+ + A+ + L
Sbjct: 229 INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSKSALG 288
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+ L I+ + AY+ R L + LG H+ A+KD
Sbjct: 289 LYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKD 330
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ Y AI ++ L+ Y +A R A+ E +I DF +AI+ N
Sbjct: 211 NRGVCKIGLKLYNEAILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELN 270
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG +++ALG EAI D AL EP+ D + R + AV+D
Sbjct: 271 AQYYYAYNNRGNSKSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKD 330
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQF--- 560
+ D N AY L+ ++ +YK+A + + K I+L+ +A+ + T++
Sbjct: 331 YDIVTEFDNNNIDAYYNKALSYYNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCMG 390
Query: 561 -YQD-LANSEKALEC 573
YQ+ L + +KA+E
Sbjct: 391 LYQEALKDYDKAIEI 405
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMY-PEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G A+ + G Y AI +++ ++ P A RG + + AI D ++++
Sbjct: 178 GDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGLKLYNEAILDINKSLEIYD 237
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R A+ LG ++I+D KA+E + RG + A+ D
Sbjct: 238 EYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSKSALGLYEEAISDF 297
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ AY LA +++G ++ A + + + D N ++A+ + Y +L++
Sbjct: 298 DTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDAYYNKALSYYNLSD 357
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++AL+ +V+ ++ + + AY+ RG + +G +++A+KD
Sbjct: 358 YKEALKNYDKVIELNPQSADAYNNRGFTKYCMGLYQEALKD 398
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEAHLKAIQL 546
E G+ FK ++ AVE + + ++ KS Y YLGL+ +++G +++A + KAI+
Sbjct: 5 EEGLKLFKEGEYKKAVELFNKALNKEENTKSEIYNYLGLSENALGNFEEAINYYDKAIET 64
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N+ E + + +L E+A++ +V+ + SKAY RG LG +++A+K
Sbjct: 65 DENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAYDDRGFAKGNLGYYEEALK 124
Query: 607 DL 608
D+
Sbjct: 125 DI 126
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 428 QRELEAAISDFTEAI-QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ E + A+ F +A+ + + E + G + ALG EAI KA+E + N A++
Sbjct: 13 EGEYKKAVELFNKALNKEENTKSEIYNYLGLSENALGNFEEAINYYDKAIETDENYAELY 72
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R + AV+D ++L + AY G A ++G Y++A + KAI L
Sbjct: 73 YNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAYDDRGFAKGNLGYYEEALKDIDKAIIL 132
Query: 547 DRNFLEAWGHLT-------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
D ++A+ ++Y+ A+E ++VL +D + AY+ G +G
Sbjct: 133 DSTNIDAYSDRAFIKLVSKKYYE-------AIEDYKKVLELDDKDVYAYNGIGDAKRSIG 185
Query: 600 QHKKAI 605
+++AI
Sbjct: 186 LYEEAI 191
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 58 ILDSLLAQSYEIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCA 112
ILD + +S EI D NRA L L++ I+D DKA++L+ AY +G +
Sbjct: 226 ILD--INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNS 283
Query: 113 FSALGRKEEALSVW------EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
SALG EEA+S + E Y A + A K L L E A +D + E+D +
Sbjct: 284 KSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEY---AVKDYDIVTEFDNN 340
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDV 207
N + + S N +D E +N++K + + + QS D
Sbjct: 341 NIDAYYNKALSYYNLSD-YKEALKNYDK--VIELNPQSADA 378
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L N+ +AI D + ++ NRA L L++ ++D DK ++L PT +AY
Sbjct: 47 ALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAY 106
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
+G A LG EEAL +K
Sbjct: 107 DDRGFAKGNLGYYEEALKDIDKA 129
>gi|440684051|ref|YP_007158846.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681170|gb|AFZ59936.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1176
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G A++ ++Q K P E +G + L AI+ + +A+ P
Sbjct: 308 QGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQALSLKP 367
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG G+ AI +A++F+P+ + RG+ K A+
Sbjct: 368 DFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWEAISSY 427
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL ++ + Y G+AL+ +Y+ A ++ +AI + ++ E W L
Sbjct: 428 DQALKLQPHDQETWYYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVVLFSLKR 487
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+E Q L I A + RG+ L LG+ ++AI
Sbjct: 488 WSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAI 526
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ S+ DF +RG G + +AI+ FDQ ++ P Y EA RG A
Sbjct: 355 AIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLAL 414
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSAD 484
+ AIS + +A++ P E W RG A A+GE E AI +A++ +P+ +
Sbjct: 415 LKLGLIWEAISSYDQALKLQPHDQETWYYRGVA-LAVGEQYEDAIASYDRAIDIQPDYHE 473
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +RG+V F K ++ A+E + + + A G+AL ++G ++A ++ +AI
Sbjct: 474 VWIDRGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAITSYQQAI 533
Query: 545 QLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +F AW + + FY D +A+ C L I + +A+
Sbjct: 534 TIKPDFHPAWYNQAVALFYLD--RFPEAIACYDSALEIKLDYWEAW 577
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ ++G+ + + AI+ +DQ L P + +A RG + + AI+ F +A
Sbjct: 337 EYWFNQGLTLFHLQRLTEAIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQA 396
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P EAW RG A LG EAI +AL+ +P+ + + RG+ + +
Sbjct: 397 IQFKPDYQEAWSSRGLALLKLGLIWEAISSYDQALKLQPHDQETWYYRGVALAVGEQYED 456
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + + + + G+ L S+ + +A E+ +A+ + + A +
Sbjct: 457 AIASYDRAIDIQPDYHEVWIDRGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIAL 516
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++L E+A+ QQ + I F A++ + + L L + +AI
Sbjct: 517 ENLGRREEAITSYQQAITIKPDFHPAWYNQAVALFYLDRFPEAI 560
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A +G +A +L A++ + +A + P E W +G L EAI +A
Sbjct: 303 QAWFYQGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQA 362
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +P+ + RG + +F DF+ A+ ++ + + A++ GLAL +G +
Sbjct: 363 LSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWE 422
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A ++ +A++L + E W +Y+ +A E A+ + + I + + +
Sbjct: 423 AISSYDQALKLQPHDQETW-----YYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWID 477
Query: 591 RGLLLHGLGQHKKAIK 606
RG++L L + +AI+
Sbjct: 478 RGVVLFSLKRWSEAIE 493
>gi|257060934|ref|YP_003138822.1| hypothetical protein Cyan8802_3148 [Cyanothece sp. PCC 8802]
gi|256591100|gb|ACV01987.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 249
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y AI+ F + LK +P A RG A + + + A++DF++++
Sbjct: 64 VEQGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLIL 123
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P EA+ RG LG+ EAI + +AL+ PN A + G+ + A +
Sbjct: 124 DPKMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQK 183
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D S + +D + AY GLA S +G+ KKA KA ++
Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 88/163 (53%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G ++ Q + + AI+DFTEA+++NP+ A+ RG A + LG+ A+ D S++L
Sbjct: 63 LVEQGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLI 122
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + D A+ + +KL+ + A+ LGLA ++G+ A+
Sbjct: 123 LDPKMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ 182
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ +AI +D + EA+ + + DL ++KA Q+ I
Sbjct: 183 KDFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G ++ G+ AI D ++AL+ PN + + RG F+ A+ D S + LD
Sbjct: 66 QGIEKSRQGDYQGAIADFTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G +G+ K+A +L+A++L+ N A +L Y +L ++ A +
Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQKDF 185
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + ID ++ +AY RGL LGQ KKA D +
Sbjct: 186 SEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAA 223
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
T K+ ++ +RG A N GK+ A++ F Q L DP EA + RG
Sbjct: 83 FTEALKNNPNDINAYYNRGFAYSNLGKFDLALADFSQSLILDPKMVEAYVNRGNVYLQLG 142
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+++ EA++ NP+ A G A LG++ A +D S+A+ +P + R
Sbjct: 143 DDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQKDFSEAIIIDPQYGEAYFNR 202
Query: 490 GIV 492
G+
Sbjct: 203 GLA 205
>gi|209526186|ref|ZP_03274717.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209493442|gb|EDZ93766.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 276
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ ++S+D L R A G++A A + + +I+ P P RG R Q L
Sbjct: 38 VAEISTLSLDELLERAFATSQAGRFAEAENYWTEIINRYPDNPAMWSNRGNIRVSQNRLT 97
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+ AI+ P+A + + RG A LG +AI D ++ LE P+ A + RG
Sbjct: 98 EAIGDYNRAIELAPTAADPYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNA 157
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+++ AA+ D +LD A LAL GE K+A
Sbjct: 158 EAGQENWEAAIADYFQAAELDPNYAFARANYALALYQTGETKEA 201
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TE I P W RG R + EAI D ++A+E P +AD RG+
Sbjct: 69 WTEIINRYPDNPAMWSNRGNIRVSQNRLTEAIGDYNRAIELAPTAADPYLNRGVAYEGLG 128
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ A+ D + ++L + AY G A + ++ A + +A +LD N+
Sbjct: 129 RWSDAIADYNRTLELSPSDAIAYNNRGNAEAGQENWEAAIADYFQAAELDPNY 181
>gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 566
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 132/286 (46%), Gaps = 13/286 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG +N+ KY+ A++ +D+ L+ P + RG A Q + A++ + + IQ
Sbjct: 208 FNRGEMLMNQYKYSEAVASYDRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQL 267
Query: 445 NPSAGEAWKRRGQA-RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW +G A ++ E+ A+ + + L+ P+S + RG + + +++A+
Sbjct: 268 QPQDYEAWFYKGMALKSQWPEA--ALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAI 325
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+++ A+ G+AL +G+Y++A A+ A+Q++ +FLE W + +
Sbjct: 326 AAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQ 385
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
L E+A+ +VL + GL Q +A++ L S ++ + +
Sbjct: 386 LDRYEEAVIAYDKVLLLTSENQTLATQAGL------QRGEALEKLERYSEAIVAYK--KV 437
Query: 624 TRWRNLCFNAWPFIRRRLLCTRLLKSTVSFAGLTLMEILIPSSRNI 669
R R F AW I+ C ++ + + +F + + P + +
Sbjct: 438 VRLRPDNFEAW--IKLGQACEQVQQYSSAFEAYSQAIQIWPDNYTV 481
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+S DQ L+ +P P I RG ++ +AI+ F +A Q N + EAW RG A
Sbjct: 289 AALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIA 348
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ EAI AL+ EP+ ++ + RG + + AV + L EN++
Sbjct: 349 LCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQT 408
Query: 519 AYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
T GL AL + Y +A A+ K ++L + EAW L Q + + A E
Sbjct: 409 LATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAY 468
Query: 575 QQVLYIDKRFSKAYHLR---GLLLHGLGQHKKAI 605
Q + I + Y +R G +L Q+++AI
Sbjct: 469 SQAIQI---WPDNYTVRLMLGRVLEATHQYQQAI 499
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 43/257 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL---- 431
RGI +Y AI+ FD+ +K +P EA RG A +++R +
Sbjct: 108 RGITLSKLERYPEAIASFDKAIKIEPNNFEAWYERGLALESTFKFSAAAASYKRAIEIKP 167
Query: 432 -------------------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
E+A+ + A+Q P EAW RG+ + EA+
Sbjct: 168 DMSAIWYHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASY 227
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL+ +P S RGI K + AV ++L ++ A+ Y G+AL S
Sbjct: 228 DRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQLQPQDYEAWFYKGMALKS--- 284
Query: 533 YKKAEEAHLKAI----QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ EA L +I Q++ + W Q DL A+ + I+ F +A+
Sbjct: 285 --QWPEAALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPEAW 342
Query: 589 HLRGLLLHGLGQHKKAI 605
RG+ L LGQ+++AI
Sbjct: 343 LGRGIALCELGQYQEAI 359
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
++ +A +DQ ++ + + RG + R QR EA ++ + AI+ P W
Sbjct: 49 RFEAAFYHYDQAIQYKSDWYAGWLRRGNSLRKLQRYKEA-LASYDRAIKIKPKDYWGWTF 107
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L EAI KA++ EPN+ + +ERG+ F+AA +++
Sbjct: 108 RGITLSKLERYPEAIASFDKAIKIEPNNFEAWYERGLALESTFKFSAAAASYKRAIEIKP 167
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + + + G AL + Y+ A E++ +A+QL + EAW + + + +A+
Sbjct: 168 DMSAIWYHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASY 227
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ L + + + + RG+ L QHK A
Sbjct: 228 DRALQLQPKSYQGWFNRGIALQ--KQHKYA 255
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG ++ +Y SAI+ FD+ + + +PEA +GRG A + + AI + A+Q
Sbjct: 309 ISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQI 368
Query: 445 NPSAGEAWKRRGQARAAL-------------------------------GESVEAIQDLS 473
P E W RG+A L GE++E ++ S
Sbjct: 369 EPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQTLATQAGLQRGEALEKLERYS 428
Query: 474 KAL-------EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+ P++ + + G + + +++A E S +++ +N + LG
Sbjct: 429 EAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAYSQAIQIWPDNYTVRLMLGRV 488
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L + +Y++A + + IQ + EAW Q ++ L +A L + S+
Sbjct: 489 LEATHQYQQAINTYDRIIQRQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSE 548
Query: 587 AYHLRGLLL 595
A R LL
Sbjct: 549 AIAKRNQLL 557
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR---GTARAFQRELEAAISDFTE 440
+L + QV + Y+SA + Q ++ ++P+ R G + + AI+ +
Sbjct: 450 KLGQACEQVQQ--YSSAFEAYSQAIQ---IWPDNYTVRLMLGRVLEATHQYQQAINTYDR 504
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
IQ P EAW RRGQ L EA ALE +PN ++ + +R + K + N
Sbjct: 505 IIQRQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSEAIAKRNQLLVKLQAGN 564
Query: 501 AA 502
A
Sbjct: 565 GA 566
>gi|456062996|ref|YP_007501966.1| TPR repeat-containing protein [beta proteobacterium CB]
gi|455440293|gb|AGG33231.1| TPR repeat-containing protein [beta proteobacterium CB]
Length = 267
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+GK A +++ IL++DP++ A+ G G A + AI F AI + S A+
Sbjct: 27 QGKLQEAWALYQTILRQDPVHYGAIHGMGLIAAQMKSYSMAIDLFNNAIAVDSSNPRAYS 86
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A A+ G+ A+++ A++ +P+ D + RG+V + K + +A+ D + ++L
Sbjct: 87 NLGNALASEGKRTLALKNFDIAIKLDPSFIDAIKNRGLVRAELKQYKSALTDFARVLELA 146
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
A+ Y L S+G+ KA A+ + + N +L + + AL
Sbjct: 147 PGYWRAHIYTANVLISMGKLDKALHAYDLGLAANPNSATLCNNLGAILCSMGRFKLALPR 206
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L++ + I+ ++++A++ R + L GL + A+K
Sbjct: 207 LERAIKINPQYAEAFNNRAVALIGLNRKADALK 239
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +EGK A+ FD +K DP + +A+ RG RA ++ ++A++DF ++ P
Sbjct: 89 GNALASEGKRTLALKNFDIAIKLDPSFIDAIKNRGLVRAELKQYKSALTDFARVLELAPG 148
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A ++G+ +A+ L PNSA + + G + F A+ L
Sbjct: 149 YWRAHIYTANVLISMGKLDKALHAYDLGLAANPNSATLCNNLGAILCSMGRFKLALPRLE 208
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+K++ + A+ +AL + A +++ A++L + +A
Sbjct: 209 RAIKINPQYAEAFNNRAVALIGLNRKADALKSYDHALELKPGYQDA 254
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Y+ AI +F+ + D P A G A A + + A+ +F AI+ +PS
Sbjct: 55 GLIAAQMKSYSMAIDLFNNAIAVDSSNPRAYSNLGNALASEGKRTLALKNFDIAIKLDPS 114
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SADILHERGIVNFKFKDFN 500
+A K RG RA L + A+ D ++ LE P +A++L G +
Sbjct: 115 FIDAIKNRGLVRAELKQYKSALTDFARVLELAPGYWRAHIYTANVLISMG-------KLD 167
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ + + + + LG L S+G +K A +AI+++ + EA+
Sbjct: 168 KALHAYDLGLAANPNSATLCNNLGAILCSMGRFKLALPRLERAIKINPQYAEAF 221
>gi|414078017|ref|YP_006997335.1| TPR repeat-containing putative serine protease [Anabaena sp. 90]
gi|413971433|gb|AFW95522.1| TPR repeat-containing putative serine protease [Anabaena sp. 90]
Length = 410
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
Y+ AI+ ++++++ +P Y EAL+ RG++ + +AAI+DF EAI+ NP +A+
Sbjct: 269 YSGAIAAYNEVIRLNPNYAEALLYRNRGSSYYALGDTQAAIADFNEAIKINPDDAKAYAV 328
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG+ AI+D ++ ++ P+ A RGI ++ D A+ DL L
Sbjct: 329 RGIARYKLGDRRAAIRDFNEVIKINPDDARAYAGRGIARYELGDKQGAIADLKTAANLSA 388
Query: 515 E--NKSAY 520
+ NK Y
Sbjct: 389 QQGNKKLY 396
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S I+ +LS G+ VN G IS+ D P + L+ + + +R+ AI
Sbjct: 221 SIPINTFIKLSAGVG-VNLG-----ISLPDVPNAGTPQADDYLV-QADYKLHKRDYSGAI 273
Query: 436 SDFTEAIQSNPSAGEA--WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ + E I+ NP+ EA ++ RG + ALG++ AI D ++A++ P+ A RGI
Sbjct: 274 AAYNEVIRLNPNYAEALLYRNRGSSYYALGDTQAAIADFNEAIKINPDDAKAYAVRGIAR 333
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-----EEAHLKAIQLDR 548
+K D AA+ D + +K++ ++ AY G+A +G+ + A A+L A Q ++
Sbjct: 334 YKLGDRRAAIRDFNEVIKINPDDARAYAGRGIARYELGDKQGAIADLKTAANLSAQQGNK 393
Query: 549 NFLEAWGHLTQFYQ 562
+ L + +Q
Sbjct: 394 KLYQKVSELLRIFQ 407
>gi|409991026|ref|ZP_11274326.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
gi|409938113|gb|EKN79477.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
Length = 265
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--RELEAAISDFTEAI 442
RG+A+ G AI+ F Q ++ + Y A RG R F+ L AI+DFT+AI
Sbjct: 46 FDRGVARYQRGDKQGAIADFTQAIRLNRNYALAYYNRGVVR-FKSGNNLTEAIADFTQAI 104
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNA 501
+ NP +A+ R AR + + AI D+++ + +P+ + RG++ + KD+
Sbjct: 105 RLNPEYVDAYYNRAIARVKVQQYWPAIDDITQVIRLDPSHDRAFYLRGLIYSENLKDYQT 164
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ D + ++L+ N + Y G A IG+ ++A + + KAI+++ + E + +
Sbjct: 165 GINDFTEAIRLNPGNPAPYFKRGNARYRIGDRERAIDDYNKAIEINPSDPEPYYNRAISR 224
Query: 562 QDLANSEKALECLQQV--LYID 581
+ + + A+ LQ+ LY+D
Sbjct: 225 YQIGDRQGAIFDLQKSADLYMD 246
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
VD +R IA+V +Y AI Q+++ DP + A RG + ++ + I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDITQVIRLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ NP + +RG AR +G+ AI D +KA+E P+ + + R I ++ D
Sbjct: 171 EAIRLNPGNPAPYFKRGNARYRIGDRERAIDDYNKAIEINPSDPEPYYNRAISRYQIGDR 230
Query: 500 NAAVEDL--SACVKLDKENKSAY 520
A+ DL SA + +D N Y
Sbjct: 231 QGAIFDLQKSADLYMDLGNFEKY 253
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-FKDFNAAVEDLSACVKLD 513
RG AR G+ AI D ++A+ N A + RG+V FK + A+ D + ++L+
Sbjct: 48 RGVARYQRGDKQGAIADFTQAIRLNRNYALAYYNRGVVRFKSGNNLTEAIADFTQAIRLN 107
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E AY +A + +Y W A++
Sbjct: 108 PEYVDAYYNRAIARVKVQQY--------------------W--------------PAIDD 133
Query: 574 LQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLSSGSR 613
+ QV+ +D +A++LRGL+ L ++ I D + R
Sbjct: 134 ITQVIRLDPSHDRAFYLRGLIYSENLKDYQTGINDFTEAIR 174
>gi|428302096|ref|YP_007140402.1| hypothetical protein Cal6303_5552 [Calothrix sp. PCC 6303]
gi|428238640|gb|AFZ04430.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 375
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + + +K DP Y +A GRG R+ + + A++D+T+AI+ NP+ A+ RG
Sbjct: 261 YRGAIADYSEAIKLDPNYADAYYGRGIVRSKLGDKQGAMADYTQAIKINPNLDVAYHNRG 320
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
R+ LG+ AI D ++A++ PN + + RG+V + D A+ D + +K
Sbjct: 321 VVRSKLGDKQGAIADYTQAIKINPNLTEPYNNRGVVRSELGDKQGAIADYNQAIK 375
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G ++ ++ AI+D++EAI+ +P+ +A+ RG R+ LG+ A+ D ++A++ P
Sbjct: 251 KGNEKSSNKDYRGAIADYSEAIKLDPNYADAYYGRGIVRSKLGDKQGAMADYTQAIKINP 310
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N H RG+V K D A+ D + +K++ Y G+ S +G+ + A +
Sbjct: 311 NLDVAYHNRGVVRSKLGDKQGAIADYTQAIKINPNLTEPYNNRGVVRSELGDKQGAIADY 370
Query: 541 LKAIQ 545
+AI+
Sbjct: 371 NQAIK 375
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI D S+A++ +PN AD + RGIV K D A+ D + +K++ AY G+
Sbjct: 264 AIADYSEAIKLDPNYADAYYGRGIVRSKLGDKQGAMADYTQAIKINPNLDVAYHNRGVVR 323
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
S +G+ + A + +AI+++ N E + + +L + + A+ Q +
Sbjct: 324 SKLGDKQGAIADYTQAIKINPNLTEPYNNRGVVRSELGDKQGAIADYNQAI 374
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN+ D L +G KD+ A+ D S +KLD AY G+ S +G+ + A
Sbjct: 243 PNADDFLI-KGNEKSSNKDYRGAIADYSEAIKLDPNYADAYYGRGIVRSKLGDKQGAMAD 301
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI+++ N A+ + L + + A+ Q + I+ ++ Y+ RG++ LG
Sbjct: 302 YTQAIKINPNLDVAYHNRGVVRSKLGDKQGAIADYTQAIKINPNLTEPYNNRGVVRSELG 361
Query: 600 QHKKAIKD 607
+ AI D
Sbjct: 362 DKQGAIAD 369
>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
bacterium 560]
Length = 723
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ +I D+ + G+ G+ +A+ ++ +L +P + EA G
Sbjct: 64 AVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTL 123
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+L+AA+ + +AI P EA G A LG+ A++ KA+ +P+ A+
Sbjct: 124 KELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAET 183
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ G + AV+ + + + +AY LG L +G+ A +++ KAI
Sbjct: 184 HNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIA 243
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ EA +L Q L ++A++ +Q + I FS AY+ G +L LGQ A+
Sbjct: 244 IKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAV 303
Query: 606 K 606
+
Sbjct: 304 R 304
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+ +++ + P Y EA G A +L+ A+ + +AI P E G A
Sbjct: 131 AAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNA 190
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ EA++ +A+ + + ++ + G V + + AV+ + + +
Sbjct: 191 LQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDE 250
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A+ LG AL +G+ +A +++ +AI + +F A+ +L ++L + A+ ++ +
Sbjct: 251 AHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAI 310
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
I ++KA++ G+ L LGQ A+K+L
Sbjct: 311 VIKPDYAKAHNNLGIALQDLGQMDTAVKNL 340
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ +++ + P + E G A +L+ A+ + +AI A+
Sbjct: 161 GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYN 220
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LG+ +A++ KA+ +P+ + + G + AV+ + +
Sbjct: 221 LGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQS 280
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY LG L +G+ A ++ KAI + ++ +A +L QDL + A++ L
Sbjct: 281 DFSNAYYNLGNVLRELGQVDTAVRSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNL 340
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ + I F++A+H G+ L LGQ A+K
Sbjct: 341 EKAIAITPDFAEAHHNLGIALQDLGQIDAAVK 372
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ G+ A+ F++ L P Y E G +L+AA+ + + + NP
Sbjct: 52 GVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPE 111
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G L + A++ KA+ +P+ A+ + G + + AV+
Sbjct: 112 HAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYE 171
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + + + LG AL +G+ +A +++ +AI + +F A+ +L ++L
Sbjct: 172 KAIAIKPDFAETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQL 231
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ A++ ++ + I + +A++ G L GLGQ +A+K
Sbjct: 232 DDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEAVK 270
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q++E A+ ++Q + + A G +L+ A+ + +AI P
Sbjct: 192 QGLGQLDE-----AVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA G A LG+ EA++ +A+ + + ++ + G V + + AV
Sbjct: 247 DYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSY 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + A+ LG+AL +G+ A + KAI + +F EA +L QDL
Sbjct: 307 KKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAEAHHNLGIALQDLGQ 366
Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
+ A++ ++ + I +++AYH
Sbjct: 367 IDAAVKGYEKAIAIKPDYAEAYH 389
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 12/286 (4%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ +++ + P Y EA G A +L+ A+ + +AI A+
Sbjct: 229 GQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYN 288
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LG+ A++ KA+ +P+ A + GI + AV++L + +
Sbjct: 289 LGNVLRELGQVDTAVRSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITP 348
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ LG+AL +G+ A + + KAI + ++ EA+ +L+ + AN + + +
Sbjct: 349 DFAEAHHNLGIALQDLGQIDAAVKGYEKAIAIKPDYAEAYHNLSYLKKYTANDPQ-ISIM 407
Query: 575 QQVL-YIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNL- 629
Q +L D S HL L LG + + L G+R L +++ + +NL
Sbjct: 408 QSLLSRSDLNLSNRIHLCLALAEVNENLGNQDEFFEFLHEGNRLRKKELNYSIDKDQNLF 467
Query: 630 -----CFNAWPFIRRRLLCTR-LLKSTVSFAGLTLMEILIPSSRNI 669
F++ P + R + + +G TL+E +I S +
Sbjct: 468 SIIKKIFSSPPSLSYEPSTIRPVFIVGMPRSGTTLVEQIIASHHAV 513
>gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 560
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + +Y AI+ +D+ L+ P A RG A ++ E AI+ + +A++ P
Sbjct: 337 QGYALYHLERYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQP 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A + LG EAI KALE +P+ + RGI + A+
Sbjct: 397 DDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASY 456
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + +S +++ G ALS + Y++A ++ KA++ ++ AW Y N
Sbjct: 457 DKALEIKPDYQSGWSHRGNALSFLKRYEEAITSYEKALKFKPDYHYAWYFKACCYALQGN 516
Query: 567 SEKALECLQQVL 578
+ A+E LQQ +
Sbjct: 517 VDLAIENLQQAI 528
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI +Y +A+ +D+ L+ +G A E AI+ + +A++
Sbjct: 301 LIRGITLSRFARYEAALVSYDKALELQLDDNSVWDHQGYALYHLERYEEAIASYDKALEI 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + LG EAI KALE +P+ + RGI + A+
Sbjct: 361 QPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIA 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ ++ A+ + G+ALS +G Y++A ++ KA+++ ++ W H L
Sbjct: 421 SYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIKPDYQSGWSHRGNALSFL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
E+A+ ++ L + A++ + G AI++L +
Sbjct: 481 KRYEEAITSYEKALKFKPDYHYAWYFKACCYALQGNVDLAIENLQQAIK 529
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
++ V Y A++ DQ+LK P + + RG + EAA+ + +A++
Sbjct: 271 LSYVIGNNYQKALASCDQLLKLQPKNYQIWLIRGITLSRFARYEAALVSYDKALELQLDD 330
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
W +G A L EAI KALE +P+ + RGI + A+
Sbjct: 331 NSVWDHQGYALYHLERYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDK 390
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+++ ++ A+ + G+ALS +G Y++A ++ KA+++ + AW L E
Sbjct: 391 ALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYE 450
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L I + + RG L L ++++AI
Sbjct: 451 EAIASYDKALEIKPDYQSGWSHRGNALSFLKRYEEAI 487
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA G+Y AI+ +D+ L+ P Y RG A +F + E AI+ + +A++ P
Sbjct: 439 RGIALSYLGRYEEAIASYDKALEIKPDYQSGWSHRGNALSFLKRYEEAITSYEKALKFKP 498
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
AW + A G AI++L +A++ P+
Sbjct: 499 DYHYAWYFKACCYALQGNVDLAIENLQQAIKLNPD 533
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
++ + LE ++ I DKAL++ P A+ +G A S LGR EEA++ ++K E
Sbjct: 336 HQGYALYHLERYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALE 393
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R S L ++ I DKAL++ P A+ +G A S LGR EEA++ ++K E
Sbjct: 371 RGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALE 427
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R S L ++ I DKAL++ P A+ +G A S LGR EEA++ ++K E
Sbjct: 405 RGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALE 461
>gi|428298012|ref|YP_007136318.1| hypothetical protein Cal6303_1286 [Calothrix sp. PCC 6303]
gi|428234556|gb|AFZ00346.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 839
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S SV+ L +G ++ G+ +A+ IF Q +P L G A + +I
Sbjct: 2 TQSSSVETLLEQGYDLLDRGQEQTALEIFQQAATLEPQNHRVLYALGLALYRLESYQNSI 61
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNF 494
T+A++ PS A RRG A L + EA D +A++ +P N D L RGI
Sbjct: 62 EYLTQALEIQPSYILALARRGMAYTKLDQVEEAKADFERAIQIQPINHEDYLG-RGIAFD 120
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ K + A+ D + + L ++ + Y G A +++ Y++A + +A+ L ++ A+
Sbjct: 121 ELKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAY 180
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ +++L E+A+ Q L + AY RG + GL ++++AI + +
Sbjct: 181 FNRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGYVFDGLKRYEEAIANYNQA 237
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A Y ++I Q L+ P Y AL RG A ++E A +DF AIQ P
Sbjct: 48 GLALYRLESYQNSIEYLTQALEIQPSYILALARRGMAYTKLDQVEEAKADFERAIQIQPI 107
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + RG A L EAI D ++AL +P+ + RG + + A+ D +
Sbjct: 108 NHEDYLGRGIAFDELKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERYEEAIADYN 167
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L + +AY G+ ++ Y++A + +A+ L + +A+ + + L
Sbjct: 168 QALILKPDYYNAYFNRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGYVFDGLKRY 227
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E+A+ Q L + + R L+ L ++++AI D
Sbjct: 228 EEAIANYNQALILKPDSYEYLSKRACALNNLRRYEEAILD 267
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + A + F++ ++ P+ E +GRG A + E AI+DF +A+ P
Sbjct: 81 RGMAYTKLDQVEEAKADFERAIQIQPINHEDYLGRGIAFDELKRYEEAIADFNQALILKP 140
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A L EAI D ++AL +P+ + RGI + + A+ D
Sbjct: 141 DDYNTYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIADY 200
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE-------AWGHLTQ 559
+ + L ++ AY G + Y++A + +A+ L + E A +L +
Sbjct: 201 NQALILKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALILKPDSYEYLSKRACALNNLRR 260
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ + + + KAL Y+ + +YH +G
Sbjct: 261 YEEAILDCNKALAIKTDDFYVYYVKAYSYHWQG 293
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + + I+ + L RGIA +Y AI+ F+Q L P RG A
Sbjct: 100 RAIQIQPINHEDYLGRGIAFDELKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERY 159
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D+ +A+ P A+ RG L EAI D ++AL +P+ D RG
Sbjct: 160 EEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGY 219
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
V K + A+ + + + L + +Y YL ++ ++ EEA L
Sbjct: 220 VFDGLKRYEEAIANYNQALILKPD---SYEYLSKRACALNNLRRYEEAIL 266
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
+RG A N +Y AI+ ++Q L P Y A RG T R +R E AI+D+ +A+
Sbjct: 147 FNRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLER-YEEAIADYNQALI 205
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P +A+ RG L EAI + ++AL +P+S + L +R + + A+
Sbjct: 206 LKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALILKPDSYEYLSKRACALNNLRRYEEAI 265
Query: 504 EDLSACVKLDKENKSAY 520
D + + + ++ Y
Sbjct: 266 LDCNKALAIKTDDFYVY 282
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR + ++ LE ++ I D ++AL L P AY +G F L R EEA++
Sbjct: 148 NRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIA 198
>gi|428220648|ref|YP_007104818.1| hypothetical protein Syn7502_00526 [Synechococcus sp. PCC 7502]
gi|427993988|gb|AFY72683.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 273
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ I N+GK++ A + + +I+++ P A RG A++ Q L+ AI+D+T+AI+ P
Sbjct: 44 KAITATNQGKFSQAETFWTEIIEQFPDNAAAWSNRGNAKSSQNRLQEAIADYTKAIELAP 103
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
SA + + RG L + AI D +K L +P AD + RG +N A+ D
Sbjct: 104 SAPDPYLNRGATLQFLNQPEAAIADYNKVLALDPQDADAYNNRGNALASLGKWNEAIADF 163
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+++ A LAL G+ K+AE+ ++ NF++
Sbjct: 164 KESFEIEPNYALARANYALALYETGDVKQAEKTIKNLLRKYPNFVD 209
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TE I+ P AW RG A+++ EAI D +KA+E P++ D RG
Sbjct: 61 WTEIIEQFPDNAAAWSNRGNAKSSQNRLQEAIADYTKAIELAPSAPDPYLNRGATLQFLN 120
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
AA+ D + + LD ++ AY G AL+S+G++ +A ++ +++ N+ A +
Sbjct: 121 QPEAAIADYNKVLALDPQDADAYNNRGNALASLGKWNEAIADFKESFEIEPNYALARANY 180
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+ + ++A + ++ +L +++ +R L + KK
Sbjct: 181 ALALYETGDVKQAEKTIKNLL---RKYPNFVDMRAAFTALLWEQKK 223
>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 1107
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 18/290 (6%)
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV---------- 381
S +D+ ++ E+ + L K++ LK ++AK FCV + ++I++
Sbjct: 271 SQTDDIFVENAENITPLETKYNELKAYQSQAK----FCVDQGQFEQAITICQQALKIQPK 326
Query: 382 --DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ G A +GK +AI + Q+LK P + E RGT A +++ AI+D+
Sbjct: 327 FYHAYVILGNALHFQGKLEAAIRAYSQVLKLQPNFAEIYGNRGTMYAKLNQIDKAIADYQ 386
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--SADILHERGIVNFKFK 497
+A++ P+ G+ LG E+I+ ALE +PN A + E G + K
Sbjct: 387 QALELQPNFAVVHWNLGKIFQRLGRFEESIKSWKTALEIQPNLNGAKLHIELGNLLTGQK 446
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
F AA+ +++ A+ LG S +Y+ A + IQ++ L+ + ++
Sbjct: 447 QFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQINPKNLDLYLNM 506
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L + ++A+ C Q +L I +AY G + GQ K+AI++
Sbjct: 507 GFALVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIEN 556
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ GI GK+ SAI+ + Q L+ P E A +LEA I
Sbjct: 5 SVETYFKTGIEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQ 64
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ P+ A+ G + AI ++AL+ +P + G + + + F
Sbjct: 65 TAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRF 124
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A++ + D + Y LG A S + +KA + KAI L N ++ + L
Sbjct: 125 SEAIQCYQKAIYFDSNSAIIYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAA 184
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKA 587
+ +A+ Q +L + S+A
Sbjct: 185 ILDIQGKTIQAISYYQTILRLQPDCSEA 212
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
I G Q++ +AAIS + +A++ PS EA G + + AI+ ++
Sbjct: 436 IELGNLLTGQKQFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQI 495
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P + D+ G K A+ + + +NK AY LG ++ G+ K+A E
Sbjct: 496 NPKNLDLYLNMGFALVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIE 555
Query: 539 AHLKAIQLDRNFLEAWGHLTQFY-QD-----LANSEKALE 572
+ +AI++ ++ E + L QD +AN EK++E
Sbjct: 556 NYEQAIKIKPDWAEIYCRLAHIQKQDQPQVAIANLEKSIE 595
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 71/173 (41%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+AI+ + +A+Q P E +++ +A G+ I+ + A+ +PN A G V
Sbjct: 24 SAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNFAVAYLSIGNV 83
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ + + + E A LG + + +A + + KAI D N
Sbjct: 84 LQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQCYQKAIYFDSNSAI 143
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L + EKA+ C Q+ + + K Y +L G+ +AI
Sbjct: 144 IYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAAILDIQGKTIQAI 196
>gi|282901304|ref|ZP_06309230.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193799|gb|EFA68770.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 543
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G Y AI ++Q++ + + A RG A R +AI DF++AI NP
Sbjct: 300 GLAYYKLGDYDMAIFNYNQVINANVNHSNAYNKRGLAHYKSRNYHSAIEDFSQAISINPE 359
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+K R +AR +G+ A +D S+A+ P D+L D VEDL
Sbjct: 360 LAINYKNRAEARYLIGDYQGATEDYSQAVSIHP---DLL-----------DQPILVEDLG 405
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ Y L +G Y++A E + +AI L+ N+++A+ + Y +
Sbjct: 406 ELFNIKCHDEVIYKNRADHLYQLGAYEEALENYNQAIALNINYVDAYYQRGKIYFNKGIY 465
Query: 568 EKALECLQQVLYIDKRFSKAYHLRG 592
E A++ V+ + AY+ RG
Sbjct: 466 EAAVDDFSMVIKTQPNYGDAYYYRG 490
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 37/258 (14%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS---D 437
V+F + G ++G Y AIS + Q L+ + +Q EL+A ++
Sbjct: 234 VEFYVKLGDKHFDDGDYIVAISNYSQALQNNK----------KNSYYQGELQAELNLSHK 283
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T+ + + A+ + G A LG+ AI + ++ + N ++ ++RG+ ++K +
Sbjct: 284 YTDNVGNIDIY--AYYKLGLAYYKLGDYDMAIFNYNQVINANVNHSNAYNKRGLAHYKSR 341
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL------ 551
++++A+ED S + ++ E Y A IG+Y+ A E + +A+ + + L
Sbjct: 342 NYHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGATEDYSQAVSIHPDLLDQPILV 401
Query: 552 EAWGHL---------------TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E G L YQ L E+ALE Q + ++ + AY+ RG +
Sbjct: 402 EDLGELFNIKCHDEVIYKNRADHLYQ-LGAYEEALENYNQAIALNINYVDAYYQRGKIYF 460
Query: 597 GLGQHKKAIKDLSSGSRT 614
G ++ A+ D S +T
Sbjct: 461 NKGIYEAAVDDFSMVIKT 478
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A Y SAI F Q + +P R AR + + A D+++A+ +P
Sbjct: 333 RGLAHYKSRNYHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGATEDYSQAVSIHP 392
Query: 447 SA----------GE----------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
GE +K R LG EA+++ ++A+ N D
Sbjct: 393 DLLDQPILVEDLGELFNIKCHDEVIYKNRADHLYQLGAYEEALENYNQAIALNINYVDAY 452
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-------LGLALSSIGEYKKAEEA 539
++RG + F + AAV+D S +K AY Y +G ++ G++KKA +
Sbjct: 453 YQRGKIYFNKGIYEAAVDDFSMVIKTQPNYGDAYYYRGNCWLIMGNKQTASGDFKKAADI 512
Query: 540 H 540
+
Sbjct: 513 Y 513
>gi|160879503|ref|YP_001558471.1| beta-lactamase domain-containing protein [Clostridium
phytofermentans ISDg]
gi|160428169|gb|ABX41732.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg]
Length = 833
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G Q++ + AI + +AIQ N + W G +L + +AI+ +KA++
Sbjct: 16 KGNVCNSQKDYDKAIECYNKAIQINENHEYPWNGLGNVYNSLKDYDKAIECYNKAIQINE 75
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + GIV KD++ A+E + +++++ + + LG SS +Y KA E +
Sbjct: 76 NYKNPWNGLGIVYNSLKDYDKAIECYNKAIQINENFINPWNGLGNIYSSQNDYDKAFECY 135
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+D N W L Y + +KA+EC + + I++ F ++ G +
Sbjct: 136 NKAIQIDENQENPWNGLGNVYSFQKDYDKAIECYNKAIQINEIFENPWNGLGNVYSFQKD 195
Query: 601 HKKAIK 606
+ KAI+
Sbjct: 196 YDKAIE 201
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W R+G + + +AI+ +KA++ N + G V KD++ A+E + ++
Sbjct: 13 WNRKGNVCNSQKDYDKAIECYNKAIQINENHEYPWNGLGNVYNSLKDYDKAIECYNKAIQ 72
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+++ K+ + LG+ +S+ +Y KA E + KAIQ++ NF+ W L Y + +KA
Sbjct: 73 INENYKNPWNGLGIVYNSLKDYDKAIECYNKAIQINENFINPWNGLGNIYSSQNDYDKAF 132
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
EC + + ID+ ++ G + + KAI+
Sbjct: 133 ECYNKAIQIDENQENPWNGLGNVYSFQKDYDKAIE 167
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 98/210 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI +++ ++ + + G G ++ + AI + +AIQ N + W G
Sbjct: 26 YDKAIECYNKAIQINENHEYPWNGLGNVYNSLKDYDKAIECYNKAIQINENYKNPWNGLG 85
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+L + +AI+ +KA++ N + + G + D++ A E + +++D+
Sbjct: 86 IVYNSLKDYDKAIECYNKAIQINENFINPWNGLGNIYSSQNDYDKAFECYNKAIQIDENQ 145
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
++ + LG S +Y KA E + KAIQ++ F W L Y + +KA+EC +
Sbjct: 146 ENPWNGLGNVYSFQKDYDKAIECYNKAIQINEIFENPWNGLGNVYSFQKDYDKAIECYNK 205
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ I++ ++ G + + + KAIK
Sbjct: 206 AIQINENQESPWNGLGNIYYFQKYYDKAIK 235
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI +++ ++ + Y G G ++ + AI + +AIQ N + W G
Sbjct: 60 YDKAIECYNKAIQINENYKNPWNGLGIVYNSLKDYDKAIECYNKAIQINENFINPWNGLG 119
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
++ + +A + +KA++ + N + + G V KD++ A+E + +++++
Sbjct: 120 NIYSSQNDYDKAFECYNKAIQIDENQENPWNGLGNVYSFQKDYDKAIECYNKAIQINEIF 179
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
++ + LG S +Y KA E + KAIQ++ N W L Y +KA++C +
Sbjct: 180 ENPWNGLGNVYSFQKDYDKAIECYNKAIQINENQESPWNGLGNIYYFQKYYDKAIKCYNK 239
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLC 630
+ I+K + ++ G + + KAI + S + P+ NLC
Sbjct: 240 AIQINKNYELPWNGFGRVYEKQKDYNKAI-ECYKNSFAINPNYRSPYNNLTNLC 292
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 137/324 (42%), Gaps = 24/324 (7%)
Query: 277 SSDDFDICNGPIDKA-SVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS-SIS 334
S D+D +KA +NE H NG +V++ SL D + E Y+K+ I+
Sbjct: 22 SQKDYDKAIECYNKAIQINENHEYPWNGLGNVYN-------SLKDYDKAIECYNKAIQIN 74
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF-RLSRGIAQV- 392
+N + W+ L N K K + +K+ I+ +F G+ +
Sbjct: 75 ENYKN-----------PWNGLGIVYNSLKDYDK-AIECYNKAIQINENFINPWNGLGNIY 122
Query: 393 -NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++ Y A +++ ++ D G G +FQ++ + AI + +AIQ N
Sbjct: 123 SSQNDYDKAFECYNKAIQIDENQENPWNGLGNVYSFQKDYDKAIECYNKAIQINEIFENP 182
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W G + + +AI+ +KA++ N + G + + K ++ A++ + ++
Sbjct: 183 WNGLGNVYSFQKDYDKAIECYNKAIQINENQESPWNGLGNIYYFQKYYDKAIKCYNKAIQ 242
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++K + + G +Y KA E + + ++ N+ + +LT + L +
Sbjct: 243 INKNYELPWNGFGRVYEKQKDYNKAIECYKNSFAINPNYRSPYNNLTNLCEKLEKEKNFT 302
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLL 595
++++L + +AY + G L
Sbjct: 303 YNIEKLLEFNPSNQEAYRIYGNFL 326
>gi|443318565|ref|ZP_21047814.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
gi|442781830|gb|ELR91921.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
Length = 572
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 40/262 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIG------- 420
L++GIAQ + Y A++ FD+ + +P ++ EALI
Sbjct: 230 LNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALISYTQAVAL 289
Query: 421 -RGTARAF---------QRELEAAISDFTEAIQSNPS------AGEAWKRRGQARAALGE 464
G+ARA R+ E A + +A+Q + EAW + QA A G+
Sbjct: 290 DSGSARALVGQCAALNKTRQYEDAGAACQQALQESDGDWWDLGPAEAWAQYAQALAGQGQ 349
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ S+A+ P+ A +RG+V + + + A+ ++LD +T LG
Sbjct: 350 YEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIELDDTAARPWTNLG 409
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L S+G++ A A+ A+Q D N W + + L+ E++L + + +D RF
Sbjct: 410 SILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLLSANRAVNLDPRF 469
Query: 585 SKAYHLRGLLLHGLGQHKKAIK 606
++ RG L L ++ +A+
Sbjct: 470 ITGWYNRGTALISLQRYDEALN 491
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +G+Y A++ + + P Y A RG + R AI+ ++I+ + +A
Sbjct: 343 ALAGQGQYEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIELDDTAA 402
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
W G ++G+ +A+ AL+ + N+ I R +V + + ++ +
Sbjct: 403 RPWTNLGSILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLLSANRA 462
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
V LD + + G AL S+ Y +A A ++ I LD +AW L +
Sbjct: 463 VNLDPRFITGWYNRGTALISLQRYDEALNAFVQVIGLDPTNADAWTGAGVALGQLGRGAE 522
Query: 570 ALECLQQVLYIDKR 583
A + L + L ++ +
Sbjct: 523 ARQALAKALELNPQ 536
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 412 PMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P P A + +G A+ Q A++ F A+ NP AW +G+ A EA+
Sbjct: 222 PTAPALAWLNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALI 281
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL-SACVKLDKENKSAYTYLGL---- 525
++A+ + SA L + K + + ED +AC + +E+ + LG
Sbjct: 282 SYTQAVALDSGSARALVGQCAALNKTRQY----EDAGAACQQALQESDGDWWDLGPAEAW 337
Query: 526 -----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
AL+ G+Y++A A +A+ + ++ AWG L +A+ QQ + +
Sbjct: 338 AQYAQALAGQGQYEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIEL 397
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG-SRTMMPHLIW 621
D ++ + G +L +GQH A+ + R LIW
Sbjct: 398 DDTAARPWTNLGSILRSVGQHTDALAAYENALQRDANNPLIW 439
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP + RGTA + + A++ F + I +P+ +AW G A LG EA Q
Sbjct: 466 DPRFITGWYNRGTALISLQRYDEALNAFVQVIGLDPTNADAWTGAGVALGQLGRGAEARQ 525
Query: 471 DLSKALEFEPNSA 483
L+KALE P A
Sbjct: 526 ALAKALELNPQQA 538
>gi|427737683|ref|YP_007057227.1| hypothetical protein Riv7116_4249 [Rivularia sp. PCC 7116]
gi|427372724|gb|AFY56680.1| hypothetical protein Riv7116_4249 [Rivularia sp. PCC 7116]
Length = 728
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
GR + ++ E AI++F +AIQ P + +A+ RG + L E A+ D + AL+
Sbjct: 466 GRAAYKG--QKYEEAIANFAQAIQKKPDSAKAYVNRGNSHYNLKEYEAALTDYTHALKLN 523
Query: 480 PNSADILHERGIVNFKF--------KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
PN+ RG V + K++ A+ED + +++D++ AY G+ S I
Sbjct: 524 PNAIKAFVNRGNVRYMLAEYSSDPDKEYKLAIEDYNQALRIDRDEVEAYIRRGIVRSQIA 583
Query: 532 --------EYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANS-EKALECLQ 575
+Y +A + KA+Q++ N EA+ L Q+ + +KAL
Sbjct: 584 KFSGDSQKDYLRAIDDFNKALQINPNRPEAFYQRGLVRYQLAQYSSNFEQEYKKALADFN 643
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQH---------KKAIKDLSSGSR 613
Q L ++ + K Y RGL+ + L Q+ ++AI DL ++
Sbjct: 644 QALQLNGKLPKVYLKRGLVRYELAQYGGGKSDRYRQQAIDDLQKAAK 690
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 28/150 (18%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSI---SVDFRLSRGIAQVNEGK--------YASAIS 402
ML E S++ + K + +++ I V+ + RGI + K Y AI
Sbjct: 539 MLAEYSSDPDKEYKLAIEDYNQALRIDRDEVEAYIRRGIVRSQIAKFSGDSQKDYLRAID 598
Query: 403 IFDQILKEDPMYPEALIGRGTARA--------FQRELEAAISDFTEAIQSNPSAGEAWKR 454
F++ L+ +P PEA RG R F++E + A++DF +A+Q N + + +
Sbjct: 599 DFNKALQINPNRPEAFYQRGLVRYQLAQYSSNFEQEYKKALADFNQALQLNGKLPKVYLK 658
Query: 455 RGQARAALGE---------SVEAIQDLSKA 475
RG R L + +AI DL KA
Sbjct: 659 RGLVRYELAQYGGGKSDRYRQQAIDDLQKA 688
>gi|110635134|ref|YP_675342.1| hypothetical protein Meso_2801 [Chelativorans sp. BNC1]
gi|110286118|gb|ABG64177.1| TPR repeat [Chelativorans sp. BNC1]
Length = 291
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y A+ FD+ ++ DP A R + + + A++D+ +AI N
Sbjct: 72 RGAAYGRGGNYREALKDFDRAIQLDPRSFRAYANRALIYRYMGDQQRALADYNQAIALNA 131
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A+ RG+ G S EA QD KA++ + H RG++ A+ED
Sbjct: 132 SYDVAYIGRGELYRLAGRSTEAFQDFEKAIQLDTTDPRAYHRRGLLYQASGQHQYAIEDF 191
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L + Y GL+ ++G+ + A AI+L+ E+W + Y+
Sbjct: 192 AKAISLAPDQPYGYNGRGLSYLALGDDENAFTDFNTAIRLNEQLAESWANQALVYEKRGE 251
Query: 567 SEKALECLQQVLYIDKRFSKA 587
+KA + L +D ++ A
Sbjct: 252 MDKAARSYARALSLDANYTPA 272
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS +E PN + + RG + ++ A++D ++LD + AY
Sbjct: 48 SEENIASLSAVIERTPNDPEAYNIRGAAYGRGGNYREALKDFDRAIQLDPRSFRAYANRA 107
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +G+ ++A + +AI L+ ++ A+ + Y+ S +A + ++ + +D
Sbjct: 108 LIYRYMGDQQRALADYNQAIALNASYDVAYIGRGELYRLAGRSTEAFQDFEKAIQLDTTD 167
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLS 609
+AYH RGLL GQH+ AI+D +
Sbjct: 168 PRAYHRRGLLYQASGQHQYAIEDFA 192
>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
11109]
gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 668
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 352 WDMLKET--SNEAKRNKKFCVTRISKSKSISVDFRL-----SRGIAQVNEGKYASAISIF 404
+DML +T + E + K R++ S + D + +R + + G A S
Sbjct: 373 YDMLHKTQQAREDFQKAKELSGRVAYSPPSAQDTAIPVPPSTRPVVAPSAGPVAPPESAA 432
Query: 405 DQI--------LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
DQ LK +P +A RG + + +++ AI+DF+ +++ P +A+ RG
Sbjct: 433 DQAAWDKIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRG 492
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A A G+ +A+ DL++AL+ +P+S + L+ RG + + ++ A+ DL+ + L+
Sbjct: 493 TAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLNPNY 552
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G ++A KA+ LD +A+ + Y + A+ Q
Sbjct: 553 AKAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQ 612
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRN 628
L ++ R ++AY+ R + L G+ ++A+ + R P L + + +N
Sbjct: 613 ALALNPRLAQAYYDRAVALEKTGRRQEALDSYEAFLRCAPPELSGQIEKAQN 664
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 18/250 (7%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
E+ ++F R S +SI + ++G+ +Y A+S F Q++ P +PEA
Sbjct: 243 ESAPPEQFITVRSSLDRSIKPIY--NQGVDHFFNKQYDLAVSEFSQVINAHPNFPEAYFN 300
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + + E AI+DF ++ +P+ G+A+ RG A+ G +A+ D ++AL+F P
Sbjct: 301 RGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEKALADFNRALQFNP 360
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A I RG V A ED +L + AY+ A++
Sbjct: 361 SDAQIYRARGNVYDMLHKTQQAREDFQKAKEL--SGRVAYS-----------PPSAQDTA 407
Query: 541 LKAIQLDRNFL-EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ R + + G + + A + A + +Q L I+ + + AY+ RG L G
Sbjct: 408 IPVPPSTRPVVAPSAGPVAP--PESAADQAAWDKIQNALKINPKNADAYYQRGGLQLKRG 465
Query: 600 QHKKAIKDLS 609
+ AI D S
Sbjct: 466 KIDDAIADFS 475
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ + +Y A++ F +I+ P + E+ RG + E AI+DF ++ +
Sbjct: 92 NQGVDYFHTKQYDLAVATFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLD 151
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + G +AI D ++ALE P A + H RGI K + A ED
Sbjct: 152 PVRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKED 211
Query: 506 LSACVKLD-----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN----FLEAWGH 556
L + A T + E E+ LDR+ + + H
Sbjct: 212 FQKARGLQIPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYNQGVDH 271
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
DLA SE QV+ F +AY RG++ GQ + AI D ++
Sbjct: 272 FFNKQYDLAVSE-----FSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNA 320
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 12/249 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+RI + V+ +RG+ GK AI+ F +L+ DP+ P A RG A + +
Sbjct: 109 TFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRR 168
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA--------LEFEP 480
+ AI+D+ A++ NP + + RG A + LG S A +D KA LE P
Sbjct: 169 GRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQIPVTLESVP 228
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ L + + + ++ + ++ LD+ K Y G+ +Y A
Sbjct: 229 PA---LTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYN-QGVDHFFNKQYDLAVSEF 284
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I NF EA+ + Y E A+ VL ID AY RG+ G+
Sbjct: 285 SQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGR 344
Query: 601 HKKAIKDLS 609
+KA+ D +
Sbjct: 345 LEKALADFN 353
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ-VNEGKYASAISIF 404
SKL + D+ KE +A R + VT S +++ + R SR + + ++ + S
Sbjct: 200 SKLG-RSDLAKEDFQKA-RGLQIPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSL 257
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D+ +K P+Y +G F ++ + A+S+F++ I ++P+ EA+ RG A G+
Sbjct: 258 DRSIK--PIY-----NQGVDHFFNKQYDLAVSEFSQVINAHPNFPEAYFNRGMIYALKGQ 310
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI D + L +PN D RG+ + A+ D + ++ + + Y G
Sbjct: 311 DELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEKALADFNRALQFNPSDAQIYRARG 370
Query: 525 LALSSIGEYKKAEEAHLKAIQL 546
+ + ++A E KA +L
Sbjct: 371 NVYDMLHKTQQAREDFQKAKEL 392
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y + + + I D ++AL L+P L QAY + A GR++EAL +E
Sbjct: 592 NRGLIYDKRKQYDLAIADFNQALALNPRLAQAYYDRAVALEKTGRRQEALDSYE 645
>gi|300023725|ref|YP_003756336.1| hypothetical protein Hden_2217 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525546|gb|ADJ24015.1| TPR repeat-containing protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 558
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 91/207 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A G+ A+ ++ ++ P YP A RG +L+ A+ DF A+ P
Sbjct: 73 RAVANARLGQIKLALEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A LG+ AI+D +KA+E P SA L RG+ +AA+ D
Sbjct: 133 GYAAAYSNRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDF 192
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V D +AY A +IG A E +AI D N E + Y AN
Sbjct: 193 SRAVSADARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNAN 252
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGL 593
+ AL+ + + +D S A+ RGL
Sbjct: 253 TASALKDFSRAIELDPNASAAFEGRGL 279
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A++ GK A AI F + ++ P L GRG A + AAI DF+ A+ ++
Sbjct: 140 NRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A++ R +AR +G +AI+DLS+A+ F+ N+ ++ RG + +A++D
Sbjct: 200 ARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNANTASALKD 259
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFLEAWGHLTQFYQDL 564
S ++LD +A+ GLA +S E A L +AI+LD A+ Y+
Sbjct: 260 FSRAIELDPNASAAFEGRGLA-NSFAEASDEAYADLNRAIELDPRSPVAYAFRAVVYKQN 318
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + ++ + +D +A RG + G AI DL
Sbjct: 319 NQPDIGAKDVETAIKLDPNSPEALWARGEIAEASGHADTAIADL 362
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 96/241 (39%), Gaps = 8/241 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG V G+ A+ FD+ L P Y A R A + AI DFT+AI+
Sbjct: 106 NRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEMKLGKPAVAIRDFTKAIELL 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ RG A A + AI+D S+A+ + A R + A+ED
Sbjct: 166 PASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFATAYRNRAEARMTIGLRDDAIED 225
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQ 562
LS + D N Y G A A + +AI+LD N E G F +
Sbjct: 226 LSRAIAFDVNNTELYVVRGYAYLLNANTASALKDFSRAIELDPNASAAFEGRGLANSFAE 285
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR--TMMPHLI 620
S++A L + + +D R AY R ++ Q KD+ + + P +
Sbjct: 286 ---ASDEAYADLNRAIELDPRSPVAYAFRAVVYKQNNQPDIGAKDVETAIKLDPNSPEAL 342
Query: 621 W 621
W
Sbjct: 343 W 343
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S+++S D R + R A++ G AI + + D E + RG A
Sbjct: 193 SRAVSADARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNAN 252
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+A+ DF+ AI+ +P+A A++ RG A + S EA DL++A+E +P S R
Sbjct: 253 TASALKDFSRAIELDPNASAAFEGRGLANSFAEASDEAYADLNRAIELDPRSPVAYAFRA 312
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+V + + +D+ +KLD + A
Sbjct: 313 VVYKQNNQPDIGAKDVETAIKLDPNSPEA 341
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 6/167 (3%)
Query: 446 PSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
PSA G A RG A+ EA++D A + A IL++R + N + A
Sbjct: 30 PSAAEQGAAQMVRGDVATAVTAYTEALRDTGLAND---RRATILNDRAVANARLGQIKLA 86
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + V+L E AY G L ++G+ +A + +A+ L + A+ +
Sbjct: 87 LEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEM 146
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L A+ + + + + RGL + AI+D S
Sbjct: 147 KLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFS 193
>gi|226310316|ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacillus brevis NBRC 100599]
gi|226093264|dbj|BAH41706.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 731
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ V ++ A F Q+++ D YPE RG + L+ AI D+ +AI+ +
Sbjct: 449 NKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIKLS 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A LG+ +A+ D L+ +P + D L R + ++ + F A +D
Sbjct: 509 PPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ LGL S G +A + A+ D+ + AW + Y ++
Sbjct: 569 AEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYH 589
++A+ L + + ++K + Y+
Sbjct: 629 EYDRAIADLTEAMALEKNATVLYN 652
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+F + S+ I +D + RG G+ AI ++Q +K P +PE
Sbjct: 458 KRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIKLSPPFPEVYFN 517
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R TA ++E A++D+ + +P + R + + A +D LE EP
Sbjct: 518 RATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEP 577
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A +L G++ + + A++ +A + DKE +A+T + +GEY +A
Sbjct: 578 DHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMGEYDRAIADL 637
Query: 541 LKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+A+ L++N + AW + Q L+ S+ + + + D Y+ RGL
Sbjct: 638 TEAMALEKNATVLYNRAWVYEAQEEWQLSISDYT----EALAFSDADEQDIYYRRGLCFI 693
Query: 597 GLGQHKKAIKD 607
+G + +D
Sbjct: 694 KMGDRELGTED 704
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + E A F++ IQ + + E + RG + +G EAI+D ++A++
Sbjct: 447 LHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIK 506
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P ++ R + D A+ D + +D EN L + +++ A
Sbjct: 507 LSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMAR 566
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ ++++ + L N+++AL+ L DK A+ R +L +
Sbjct: 567 KDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYE 626
Query: 598 LGQHKKAIKDLSSG 611
+G++ +AI DL+
Sbjct: 627 MGEYDRAIADLTEA 640
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 19/192 (9%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAG-----EAWKRRGQARAALGESVEAIQDLSKALEFE 479
RAFQ+ E NP E W+R Q DL+ E
Sbjct: 395 RAFQQVFNQNGLALVELHMDNPEEALRLVTEGWQRLNQ-------------DLAPD-EHM 440
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+ + +LH +G++ K F A E S +++D Y G S +G +A E
Sbjct: 441 LHRSVLLHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIED 500
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI+L F E + + + L + EKA+ +L ID R LL+ +
Sbjct: 501 YNQAIKLSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVE 560
Query: 600 QHKKAIKDLSSG 611
+ + A KD G
Sbjct: 561 KFEMARKDAEFG 572
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +N G+Y AI+ F+ +L+ +P EAL GR A A E A+ D+ +Q +PS
Sbjct: 753 ALINLGRYEEAIACFNPLLELEPENIEALDGRALALARSERREEALEDYNRILQLDPSNT 812
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A + LG EA + L P + +I++ +G DF AA+
Sbjct: 813 KALAEKASLFEELGRYEEAASTYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQI 872
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN--- 566
+ LD +N A G A + + Y++A ++ KAI+ N AW +++ AN
Sbjct: 873 LTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAW-----YFKGCANFAI 927
Query: 567 --SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ A+EC +V+ + A++ +G L + +G+ ++I G+ + P+
Sbjct: 928 SSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSY-DGALAINPN 980
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 33/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI G Y +AI +D+ + +P EA +G + A++ + + S P
Sbjct: 239 KGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEP 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE-- 504
A +++G LG + EA+Q + L + P++AD + +G V D++AA+
Sbjct: 299 ENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKGSVLNAMGDYDAAIACY 358
Query: 505 ----DLSACVKLDK-----------------------ENKSAYTYL----GLALSSIGEY 533
+ A +++++ E KS+ + GLA + Y
Sbjct: 359 DRALNPDAGIEVEEVGDALLEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENY 418
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A E + ++ + W Q L E+A +C + L +D ++K +H +G
Sbjct: 419 ESALECYDSVLETESGHAMVWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKGY 478
Query: 594 LLHGLGQHKKAIK 606
LGQ+K A K
Sbjct: 479 DSSKLGQYKDAAK 491
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +G + +AI+ +DQIL DP +A+ +G A A + AI+ + +AI+ P
Sbjct: 852 QGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAP 911
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G A A+ ++ A++ K ++ +P+ + +G + + N ++
Sbjct: 912 NNAAAWYFKGCANFAISSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSY 971
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++ S A I EY+ A K +D F+ A
Sbjct: 972 DGALAINPNEPSILYNKRFAHYRIKEYEDASACKTKLDAIDPGFVAA 1018
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A S + +IL P E + +G A + + EAAI+ + + + +P +A
Sbjct: 826 GRYEEAASTYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAINN 885
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A + EAI KA+E+ PN+A + +G NF AAVE V+L
Sbjct: 886 KGFAYAKMERYQEAIASYDKAIEYAPNNAAAWYFKGCANFAISSNIAAVECFDKVVQLKP 945
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +A+ G + +GE ++ ++ A+ ++ N + + + E A C
Sbjct: 946 DCITAWYNKGYLYNVMGEVNESINSYDGALAINPNEPSILYNKRFAHYRIKEYEDASACK 1005
Query: 575 QQVLYIDKRFSKAYHLRG 592
++ ID F A RG
Sbjct: 1006 TKLDAIDPGFVAALQDRG 1023
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + +Y AI +D+ L+ P + +G + AIS + +++ ++
Sbjct: 103 KGCALTSLERYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDS 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W ++ A LG EA+ +++ N + L +G ++++ A++
Sbjct: 163 YLSRVWFQKALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCF 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL------TQF 560
+ + ++ +T G+ G+Y+ A + + +AI L+ + EAW + +
Sbjct: 223 DGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEM 282
Query: 561 YQD----------------------------LANSEKALECLQQVLYIDKRFSKAYHLRG 592
YQD L +E+AL+C +++L + + A++ +G
Sbjct: 283 YQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKG 342
Query: 593 LLLHGLGQHKKAI 605
+L+ +G + AI
Sbjct: 343 SVLNAMGDYDAAI 355
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 102/236 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ + + +SV+ L++G + +Y +I FD L+ D A G+G A
Sbjct: 52 LEEVLAQRPVSVEGLLNKGNNLYSLKEYELSIECFDDALEMDSNSSMAWYGKGCALTSLE 111
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI + A++S P++ +W ++G VEAI K+L + + + ++
Sbjct: 112 RYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDSYLSRVWFQK 171
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + K A+ + + L G A + + Y +A + A+ + +
Sbjct: 172 ALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCFDGALNITPD 231
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E W Y + E A++C + + ++ ++A++ +G+ L G+ ++ A+
Sbjct: 232 DSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQDAL 287
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++D ++G A +Y AI+ +D+ ++ P A +G A
Sbjct: 868 CYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAWYFKGCANFAI 927
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AA+ F + +Q P AW +G +GE E+I AL PN IL+
Sbjct: 928 SSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSYDGALAINPNEPSILYN 987
Query: 489 RGIVNFKFKDFNAAVEDLSAC-VKLD 513
+ +++ K++ ED SAC KLD
Sbjct: 988 KRFAHYRIKEY----EDASACKTKLD 1009
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 141/327 (43%), Gaps = 21/327 (6%)
Query: 295 ERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSF 350
+ G+ G + + + +LN + +SE +++ I + S D + +S
Sbjct: 203 QMQGKAYTGLENYDEAMKCFDGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISL 262
Query: 351 KWDMLKETSN--------EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
D+ + N E ++ C + S+ ++ +G G+ A+
Sbjct: 263 NPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQ 322
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+++IL +P +A +G+ + +AAI+ + A+ NP AG + G A L
Sbjct: 323 CYEEILIYNPDNADAWYSKGSVLNAMGDYDAAIACYDRAL--NPDAGIEVEEVGDA---L 377
Query: 463 GESVEAIQD----LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
E A S+ EF+ ++ I +++G+ K +++ +A+E + ++ + +
Sbjct: 378 LEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGHAM 437
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ G L + Y++A + + KA++LD + + W L + A + + +
Sbjct: 438 VWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAV 497
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D+ ++ A++ + L G +++A+
Sbjct: 498 NLDENYTLAWYGKAFALSKTGDYEEAL 524
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+ +++L + P+ E L+ +G +E E +I F +A++ + ++ AW +G
Sbjct: 46 ATVPPSLEEVLAQRPVSVEGLLNKGNNLYSLKEYELSIECFDDALEMDSNSSMAWYGKGC 105
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A +L EAI +ALE P S+ +++G + +++ A+ + D
Sbjct: 106 ALTSLERYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDSYLS 165
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ LA +G ++A ++ +I L N + + Y L N ++A++C
Sbjct: 166 RVWFQKALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCFDGA 225
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
L I S+ + +G++ G ++ AI+
Sbjct: 226 LNITPDDSELWTQKGIMYDMSGDYEAAIQ 254
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 34/217 (15%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+ + + KS +V +G+A Y SA+ +D +L+ + + A++
Sbjct: 392 SEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGH--AMV----------- 438
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
W R+GQ L EA KAL+ + A + H +G
Sbjct: 439 ---------------------WYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKG 477
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K + A + V LD+ A+ ALS G+Y++A + K + +
Sbjct: 478 YDSSKLGQYKDAAKSFDKAVNLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDS 537
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
E W + L ++A +C Q L I+ +S A
Sbjct: 538 AEIWYNKGLLLDQLERYQEASDCYSQALQINPGYSIA 574
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L ++ + + D+L+ ++ A+ + E L +L + +AI + LL E I+
Sbjct: 723 LGRSEEAVAYYDQLLAANASDPEALQGKSE--ALINLGRYEEAIACFNPLLELEPENIEA 780
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ RA ++ E + + D ++ LQLDP+ +A K F LGR EEA S +
Sbjct: 781 LDGRALALARSERREEALEDYNRILQLDPSNTKALAEKASLFEELGRYEEAASTY 835
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 55 AIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAF 113
AI D +L I I N+ F Y+++E ++ I DKA++ P A+ KGCA
Sbjct: 865 AIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAWYFKGCAN 924
Query: 114 SALGRKEEALSVWEK 128
A+ A+ ++K
Sbjct: 925 FAISSNIAAVECFDK 939
>gi|440756148|ref|ZP_20935349.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440173370|gb|ELP52828.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1100
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ +Y +IS + Q ++ P + A +G+G A E A+S + EAI+
Sbjct: 596 AQGLEFSEMNRYEESISAYAQAIEVKPDFVAAWVGKGNQLANLGRYEEALSAYEEAIRLK 655
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A LG EA+ +A+ +P+ H +G + A+
Sbjct: 656 PDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSA 715
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + ++A+ G L+ +G Y++A A+ +AI+L ++ AW +L
Sbjct: 716 YEEAIRLKPDYEAAWLGKGNQLADLGRYEEALSAYEEAIRLKPDYEAAWLGKGNQLANLE 775
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
E+AL ++ + + + A+ +G L LG++++A+ R +
Sbjct: 776 RYEEALSAYEEAIRLKPDYEAAWLNKGNQLANLGRYEEALSAYDEAIRIV 825
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G+ GK A+ ++ Q + DP Y A +G + E +IS + +AI+
Sbjct: 561 VNKGLLLGELGKKEEALELYKQAINNDPNYYRAYYAQGLEFSEMNRYEESISAYAQAIEV 620
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW +G A LG EA+ +A+ +P+ H +G + A+
Sbjct: 621 KPDFVAAWVGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALS 680
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L + ++A+ G L+++G Y++A A+ +AI+L ++ AW DL
Sbjct: 681 AYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWLGKGNQLADL 740
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+AL ++ + + + A+ +G L L ++++A+
Sbjct: 741 GRYEEALSAYEEAIRLKPDYEAAWLGKGNQLANLERYEEAL 781
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 16/259 (6%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
K+ E+ R F V K + +F+L RG +YA A+ F++ + P Y
Sbjct: 462 KQNYTESLRGYDFLVRHFPKDE----NFQLMRGNNLYYLVRYADALDCFNRATEIKPDYF 517
Query: 416 EALIGRGTARAFQRELEA------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
A +G+ LE A+ F A+ NP +G LG+ EA+
Sbjct: 518 RAWTNKGSTIQKVGVLEGVEKEATALEYFDRALAINPDDALTLVNKGLLLGELGKKEEAL 577
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA---CVKLDKENKSAYTYLGLA 526
+ +A+ +PN + +G+ +F + N E +SA +++ + +A+ G
Sbjct: 578 ELYKQAINNDPNYYRAYYAQGL---EFSEMNRYEESISAYAQAIEVKPDFVAAWVGKGNQ 634
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L+++G Y++A A+ +AI+L ++ AW + +L E+AL ++ + + +
Sbjct: 635 LANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYEA 694
Query: 587 AYHLRGLLLHGLGQHKKAI 605
A+H +G L LG++++A+
Sbjct: 695 AWHNKGNQLANLGRYEEAL 713
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G + G+Y A+S +++ ++ P Y A +G+G A E A+S + EAI+
Sbjct: 731 LGKGNQLADLGRYEEALSAYEEAIRLKPDYEAAWLGKGNQLANLERYEEALSAYEEAIRL 790
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW +G A LG EA+ +A+ PN + + F A+
Sbjct: 791 KPDYEAAWLNKGNQLANLGRYEEALSAYDEAIRIVPNDPTPRLAKCSALVFLEQFLEALV 850
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQ 562
+++D E+ + L Y ++++ + + ++ + NFL A+ + ++ Q
Sbjct: 851 CSDKLIEIDPEDITFLNIRAFLLGMNDNYMESKKIYQEILESNPNFLPAYFTSSIVKYKQ 910
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AL+ + Q L I++ S+A++++ +L L + ++A +
Sbjct: 911 E--QYSQALDSISQCLMIEESNSQAWYMKAQILISLERFQEAFE 952
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 78/167 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G N G+Y A+S +D+ ++ P P + + +A F + A+ + I+
Sbjct: 799 LNKGNQLANLGRYEEALSAYDEAIRIVPNDPTPRLAKCSALVFLEQFLEALVCSDKLIEI 858
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P R +E+ + + LE PN IV +K + ++ A++
Sbjct: 859 DPEDITFLNIRAFLLGMNDNYMESKKIYQEILESNPNFLPAYFTSSIVKYKQEQYSQALD 918
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+S C+ +++ N A+ L S+ +++A E +++++D +++
Sbjct: 919 SISQCLMIEESNSQAWYMKAQILISLERFQEAFECFDRSLEIDSDYI 965
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 79 YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG------YEH 132
+S++ ++ I +A+++ P + A++ KG + LGR EEALS +E+ YE
Sbjct: 601 FSEMNRYEESISAYAQAIEVKPDFVAAWVGKGNQLANLGRYEEALSAYEEAIRLKPDYEA 660
Query: 133 ALHQSAD-LKQFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDK 184
A H + L EE L+A ++ + +Y+ + N +++L E L+A ++
Sbjct: 661 AWHNKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEE 718
>gi|337266372|ref|YP_004610427.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
gi|336026682|gb|AEH86333.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
Length = 280
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y +A+ F+Q ++ +P + +A R + F EAA++D+ +IQ N
Sbjct: 72 RGSAYGRGGQYQAALKDFNQAIQLNPNFYQAYSNRALIQRFLGNQEAALADYNRSIQING 131
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG G + +A D KA++ + A H RG++ A+ED
Sbjct: 132 NYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDF 191
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y GL+ + G+ A AI+LD EAW + Y+ +
Sbjct: 192 STAISLAPDAAEPYNGRGLSYLATGDEDNAFSDFNMAIKLDGKNAEAWANQALIYERRGD 251
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + ++ + ++ + A
Sbjct: 252 KAKAAKSYKEAVRLNPTYQPA 272
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS ++ P + + RG + + AA++D + ++L+ AY+
Sbjct: 48 SSENISSLSAVIQRNPQDPEGYNVRGSAYGRGGQYQAALKDFNQAIQLNPNFYQAYSNRA 107
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +G + A + ++IQ++ N+ A+ Y+ ++ A Q+ + +D
Sbjct: 108 LIQRFLGNQEAALADYNRSIQINGNYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTD 167
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL+ GQHK AI+D S+
Sbjct: 168 ARAYHNRGLIYQSQGQHKFAIEDFST 193
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + Q G +A++ +++ ++ + Y A IGRG + A +DF +AIQ +
Sbjct: 105 NRALIQRFLGNQEAALADYNRSIQINGNYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLD 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG + G+ AI+D S A+ P++A+ + RG+ D + A D
Sbjct: 165 TTDARAYHNRGLIYQSQGQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLATGDEDNAFSD 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +KLD +N A+ L G+ KA +++ +A++L+ + A
Sbjct: 225 FNMAIKLDGKNAEAWANQALIYERRGDKAKAAKSYKEAVRLNPTYQPA 272
>gi|449105205|ref|ZP_21741910.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
gi|451969511|ref|ZP_21922740.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
gi|448967192|gb|EMB47833.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
gi|451701608|gb|EMD56069.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
Length = 369
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ + + D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
I+ ++AY RG + L + +IKDL
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDL 282
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E + D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SG 611
G
Sbjct: 318 EG 319
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|145539113|ref|XP_001455251.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423050|emb|CAK87854.1| unnamed protein product [Paramecium tetraurelia]
Length = 945
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI D +AI N ++ ++ R Q+ +G+ +A++DL K +E PN +D ++ G
Sbjct: 343 FEEAIKDLNKAININSNSQFSYYNRAQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLG 402
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL--------ALSSIGEYKKAEEAHLK 542
+ + N A ++L+ + + AY G+ +S+G ++A + K
Sbjct: 403 FILTMLGNINQAFFYYCKAIQLNPKFQKAYANRGIDQILKVASLATSLGLKQQAFDDLNK 462
Query: 543 AIQLDRNFLEAWGH-------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
AI+LD N ++ + L + +L N E AL+ L Q + ID + A + RGL+
Sbjct: 463 AIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQDALNNRGLVY 522
Query: 596 HGLGQHKKAIKDLS 609
+ LGQ K+A+KD +
Sbjct: 523 NHLGQKKEALKDFN 536
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 101/226 (44%), Gaps = 8/226 (3%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+ K A++ + + +P + + I R Q ++E A+ + +A + E +
Sbjct: 238 QNKVNEALADYAVVTNINPYFIQPYIKRAKILIDQNQIEDALKEIRKAQNHEKNNAEIYY 297
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +G+ A+ ++A+ F P L++R + F+ + F A++DL+ + ++
Sbjct: 298 IEGNCYQKIGKLDMALHAYNRAITFCPKDEQYLNQRSELYFRLERFEEAIKDLNKAININ 357
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +Y + IG+ +A + K ++++ N +A+ L L N +A
Sbjct: 358 SNSQFSYYNRAQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFY 417
Query: 574 LQQVLYIDKRFSKAYHLRGL--------LLHGLGQHKKAIKDLSSG 611
+ + ++ +F KAY RG+ L LG ++A DL+
Sbjct: 418 YCKAIQLNPKFQKAYANRGIDQILKVASLATSLGLKQQAFDDLNKA 463
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVN 393
K RS+L F+ + +E + ++K+ +I+ + + S R + +
Sbjct: 325 KDEQYLNQRSELYFRLERFEE-----------AIKDLNKAININSNSQFSYYNRAQSYLK 373
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
G+ A+ ++ ++ +P + +A G + A + +AIQ NP +A+
Sbjct: 374 IGQKDQAMKDLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPKFQKAYA 433
Query: 454 RRGQAR--------AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-------- 497
RG + +LG +A DL+KA+E +PN ++ + RG F F
Sbjct: 434 NRGIDQILKVASLATSLGLKQQAFDDLNKAIELDPNCSNSYYNRG---FSFSILGTLFVN 490
Query: 498 --DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLE 552
+F A++DL+ +++D + A GL + +G+ K+A + + I L+ L
Sbjct: 491 LGNFELALKDLNQAIQIDPNYQDALNNRGLVYNHLGQKKEALKDFNQIILLNPTNGAVLN 550
Query: 553 AWGHLTQFYQDL 564
G L QFYQ L
Sbjct: 551 NIGTL-QFYQGL 561
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-------AIQDLSKALEFEPNSAD 484
+ A D +AI+ +P+ ++ RG + + LG A++DL++A++ +PN D
Sbjct: 454 QQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQD 513
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
L+ RG+V A++D + + L+ N + +G G + + ++ LKA
Sbjct: 514 ALNNRGLVYNHLGQKKEALKDFNQIILLNPTNGAVLNNIGTLQFYQGLRQDSLQSFLKAN 573
Query: 545 QLDRN 549
Q +N
Sbjct: 574 QYCQN 578
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G VN G + A+ +Q ++ DP Y +AL RG + + A+ DF + I NP+
Sbjct: 485 GTLFVNLGNFELALKDLNQAIQIDPNYQDALNNRGLVYNHLGQKKEALKDFNQIILLNPT 544
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
G G + G +++Q KA ++ N IL G + F+ + + A
Sbjct: 545 NGAVLNNIGTLQFYQGLRQDSLQSFLKANQYCQNPV-ILVNIGNIYFEERMYQQA 598
>gi|428310178|ref|YP_007121155.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
gi|428251790|gb|AFZ17749.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
Length = 606
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ K+ I D+ + RG+ N + AI+ +++ ++ P Y A RG A +
Sbjct: 377 LDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQ 436
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A + F + IQ P+ AW RG A L +AI ++A+ F PN +R
Sbjct: 437 RYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQR 496
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + + + A+ ++L + A+ G AL ++ Y+ A ++ +AI+ +
Sbjct: 497 GMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIEFNPL 556
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
EAWG+ L E+A+ + + I F A + R L LG
Sbjct: 557 DAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y+ + D+ L+ P Y EA + RG R QR+ E AI+ + +AI+ P AW R
Sbjct: 370 YSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRD-EEAIACYNKAIEFKPDYAVAWYNR 428
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+ EA + ++ +PN+A + RG + + A+ + + +
Sbjct: 429 GVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPN 488
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL + Y++A A+ K IQL ++ EAW +L E A+
Sbjct: 489 YVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYD 548
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM--MPHLIWN 622
Q + + ++A+ RG +L L ++++AI + P I+N
Sbjct: 549 QAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYN 597
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ AI+ ++ + P + +A RG A E AI+ + + IQ E W R
Sbjct: 301 RYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVIQFQTDDAEVWFER 360
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
QA L E + L KAL+ P+ A+ RG+V + A+ + ++ +
Sbjct: 361 TQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPD 420
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L+S Y++A A + IQL N AW + +L E A+
Sbjct: 421 YAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCN 480
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
Q + + + +A+ RG+ L L ++++AI
Sbjct: 481 QAIAFNPNYVQAWFQRGMALGELQRYEEAI 510
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 88/191 (46%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P++L + + AI+ + +AI P+ +AW RG+A L +AI +
Sbjct: 286 PQSLFNKAHILCELKRYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQ 345
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
++F+ + A++ ER ++ + ++ + L +++ + A+ G+ L ++ +
Sbjct: 346 VIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDE 405
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A + KAI+ ++ AW + E+A QV+ + + A++ RG
Sbjct: 406 EAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAA 465
Query: 595 LHGLGQHKKAI 605
L L +++ AI
Sbjct: 466 LGNLQRYEDAI 476
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAK--------LCSLRNWSKAIRILDSLLA 64
NK H +CE+ + AI + + L L + AI D ++
Sbjct: 290 FNKAH-ILCELKRYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVIQ 348
Query: 65 -QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+ + + R +L+ + V+ DKALQ+ P +A++++G L R EEA+
Sbjct: 349 FQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDEEAI 408
Query: 124 SVWEKGYE 131
+ + K E
Sbjct: 409 ACYNKAIE 416
>gi|427737217|ref|YP_007056761.1| hypothetical protein Riv7116_3769 [Rivularia sp. PCC 7116]
gi|427372258|gb|AFY56214.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 1381
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +RG+ + G+ AI+ +D+ ++ + + + RG A LE AI F A
Sbjct: 533 EYWFNRGLTLFHLGRLEDAIASYDKAIEINNDFYKGWYNRGRALGELGYLEDAIISFNTA 592
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ EAW G A LG EA+ K+LE EP + + RG+ ++
Sbjct: 593 LEIRPNYQEAWSNNGLALLKLGRVDEAVFCYDKSLELEPLDTENWYYRGVALSGNGEYEN 652
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ ++++ A+ G+A +GE+ +A + KA+ L +F W + +
Sbjct: 653 AIDSYDKALEIEPFLHDAWIDRGVAQGQLGEWAEAIISWDKALGLRPDFYLTWFNRAVAF 712
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L ++A+ + L I+ F A++ R + L L Q+++AI
Sbjct: 713 DNLGRRKEAVASYDKALEIEPNFHLAWYNRAVALFYLEQYEQAI 756
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I+ DF +RG A G AI F+ L+ P Y EA G A
Sbjct: 551 AIASYDKAIEINNDFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLAL 610
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ A+ + ++++ P E W RG A + GE AI KALE EP D
Sbjct: 611 LKLGRVDEAVFCYDKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDA 670
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+RG+ + ++ A+ + L + + +A ++G K+A ++ KA++
Sbjct: 671 WIDRGVAQGQLGEWAEAIISWDKALGLRPDFYLTWFNRAVAFDNLGRRKEAVASYDKALE 730
Query: 546 LDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
++ NF AW + + FY L E+A+ C + L I + +A+
Sbjct: 731 IEPNFHLAWYNRAVALFY--LEQYEQAILCYDRALQIKADYWEAW 773
>gi|332705272|ref|ZP_08425353.1| TPR repeat-containing protein [Moorea producens 3L]
gi|332356015|gb|EGJ35474.1| TPR repeat-containing protein [Moorea producens 3L]
Length = 346
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+F +RG+ Q++ G Y A++ F Q L+ +P P+ G Q + AI ++T
Sbjct: 127 AVEF-YNRGVDQLDNGNYPEAMANFKQALQLEPYDPDINYNLGYVHHIQGNYQEAIDNYT 185
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ GEA+ RG A + +EAI D SKA+ P++ + RG + ++
Sbjct: 186 AAIKIKTDYGEAYSNRGYAYFVQKKFIEAIADFSKAIALTPDNDTVYLSRGNAYSEVDNY 245
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ D + ++ +N AY GL S + +Y+ A + + ++++ F +A+
Sbjct: 246 FQAIADYDRALSINPKNAMAYYQRGLTRSKLKQYQAAVADYTETLKIEPTFADAF 300
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + K+ AI+ F + + P + RG A + AI+D+ A+ N
Sbjct: 200 NRGYAYFVQKKFIEAIADFSKAIALTPDNDTVYLSRGNAYSEVDNYFQAIADYDRALSIN 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ +RG R+ L + A+ D ++ L+ EP AD ++RG+ A++D
Sbjct: 260 PKNAMAYYQRGLTRSKLKQYQAAVADYTETLKIEPTFADAFYKRGLARLDLNKVEEAIQD 319
Query: 506 LSACVKLDKE 515
L +E
Sbjct: 320 FKKAADLFQE 329
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EA+ + +AL+ EP DI + G V+ ++ A+++ +A +K+ + AY+
Sbjct: 141 GNYPEAMANFKQALQLEPYDPDINYNLGYVHHIQGNYQEAIDNYTAAIKIKTDYGEAYSN 200
Query: 523 LGLALSSIGEYKKAEEAHLKAIQL----DRNFL---EAWGHLTQFYQDLANSEKALECLQ 575
G A ++ +A KAI L D +L A+ + ++Q +A+ ++AL
Sbjct: 201 RGYAYFVQKKFIEAIADFSKAIALTPDNDTVYLSRGNAYSEVDNYFQAIADYDRALS--- 257
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
I+ + + AY+ RGL L Q++ A+ D +
Sbjct: 258 ----INPKNAMAYYQRGLTRSKLKQYQAAVADYT 287
>gi|433773228|ref|YP_007303695.1| tetratricopeptide repeat protein [Mesorhizobium australicum
WSM2073]
gi|433665243|gb|AGB44319.1| tetratricopeptide repeat protein [Mesorhizobium australicum
WSM2073]
Length = 280
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y +A+ F+Q ++ +P + +A R + F EAA++D+ +IQ N
Sbjct: 72 RGSAYGRGGQYQAALKDFNQAIQLNPNFYQAYSNRALIQRFLGNQEAALADYNRSIQING 131
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG G + +A D KA++ + A H RG++ A+ED
Sbjct: 132 NYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDF 191
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y GL+ + G+ A AI+LD EAW + Y+ +
Sbjct: 192 STAISLAPDAAEPYNGRGLSYLATGDEDNAFSDFNMAIKLDGQNAEAWANQALIYERRGD 251
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + ++ + ++ + A
Sbjct: 252 KAKAAKAYREAVRLNPSYQPA 272
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS ++ P + + RG + + AA++D + ++L+ AY+
Sbjct: 48 SSENISSLSAVIQRNPQDPEGYNVRGSAYGRGGQYQAALKDFNQAIQLNPNFYQAYSNRA 107
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +G + A + ++IQ++ N+ A+ Y+ ++ A Q+ + +D
Sbjct: 108 LIQRFLGNQEAALADYNRSIQINGNYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTD 167
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL+ GQHK AI+D S+
Sbjct: 168 ARAYHNRGLIYQSQGQHKFAIEDFST 193
>gi|395212352|ref|ZP_10399759.1| hypothetical protein O71_03089 [Pontibacter sp. BAB1700]
gi|394457242|gb|EJF11419.1| hypothetical protein O71_03089 [Pontibacter sp. BAB1700]
Length = 222
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 79/159 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + GKY AI + ++LK++P + + RG AR + AI+DF +A+ +P+
Sbjct: 39 GNQKFKSGKYTEAIKEYSEVLKQEPEHIVTMTNRGIARDRILDYRGAIADFDKALALDPT 98
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EAW RG ++ L + A+ D + A+ + A + RG+V + KD+ +A+ D
Sbjct: 99 HVEAWVSRGLSKYNLQDYKGALVDFNTAVSIDQLQARTYNNRGLVRYALKDYRSAIIDYG 158
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ L + AY G + G+ A E +KA QL
Sbjct: 159 RAITLQPDYAEAYYNRGAPRYTSGDKSGACEDWVKAEQL 197
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ Y AI+ FD+ L DP + EA + RG ++ ++ + A+ DF A+ +
Sbjct: 71 NRGIARDRILDYRGAIADFDKALALDPTHVEAWVSRGLSKYNLQDYKGALVDFNTAVSID 130
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG R AL + AI D +A+ +P+ A+ + RG + D + A ED
Sbjct: 131 QLQARTYNNRGLVRYALKDYRSAIIDYGRAITLQPDYAEAYYNRGAPRYTSGDKSGACED 190
Query: 506 LSACVKLDKENKSAY 520
+L + + Y
Sbjct: 191 WVKAEQLGLKEAAQY 205
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI +++E ++ P RG AR + + AI D KAL +P + RG+
Sbjct: 51 AIKEYSEVLKQEPEHIVTMTNRGIARDRILDYRGAIADFDKALALDPTHVEAWVSRGLSK 110
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +D+ A+ D + V +D+ Y GL ++ +Y+ A + +AI L ++ EA
Sbjct: 111 YNLQDYKGALVDFNTAVSIDQLQARTYNNRGLVRYALKDYRSAIIDYGRAITLQPDYAEA 170
Query: 554 W 554
+
Sbjct: 171 Y 171
Score = 45.8 bits (107), Expect = 0.081, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 67/152 (44%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + G+ EAI++ S+ L+ EP + RGI + D+ A+ D + LD
Sbjct: 39 GNQKFKSGKYTEAIKEYSEVLKQEPEHIVTMTNRGIARDRILDYRGAIADFDKALALDPT 98
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ GL+ ++ +YK A A+ +D+ + + L + A+
Sbjct: 99 HVEAWVSRGLSKYNLQDYKGALVDFNTAVSIDQLQARTYNNRGLVRYALKDYRSAIIDYG 158
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + + +++AY+ RG + G A +D
Sbjct: 159 RAITLQPDYAEAYYNRGAPRYTSGDKSGACED 190
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +SRG+++ N Y A+ F+ + D + RG R ++ +AI D+
Sbjct: 100 VEAWVSRGLSKYNLQDYKGALVDFNTAVSIDQLQARTYNNRGLVRYALKDYRSAIIDYGR 159
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI P EA+ RG R G+ A +D KA
Sbjct: 160 AITLQPDYAEAYYNRGAPRYTSGDKSGACEDWVKA 194
>gi|354568673|ref|ZP_08987836.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353539927|gb|EHC09407.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 422
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 121/238 (50%), Gaps = 14/238 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG+A+ + YA AI+ F + ++ +P + +A RG A E+ A+SD+TEA
Sbjct: 4 DF-YNRGLARAKQKDYAGAIAEFTRAIEINPHFADAFCQRGLAYYDSGEILLAVSDYTEA 62
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q N + EA+ R AR AL A+ D ++ + N A + RGI+ K +
Sbjct: 63 LQLNTESVEAYYCRALARVALKNFPGALADANQVIRLNRNHAAAYNLRGIIYRKMGRVHD 122
Query: 502 AVED--LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ----LDRNFLEAWG 555
A+ + L+A + L +++K L L I + + + +L +Q + +
Sbjct: 123 AIANFKLAADLYLQQKDKDN---CRLCLEKIKQLQPKQ--NLTVVQQRPTPTKPIMSPQE 177
Query: 556 HLTQFYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ TQ + + ++ +ALE L VL +D + ++AY RG++ + G +++AI D +
Sbjct: 178 YFTQLLEKAEKGDTRQALEDLNWVLQVDPQDAQAYCCRGVVRYKQGNYREAIADFNQA 235
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 361 EAKRNKKFCVTRISKSKSI-SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ K+N R + +K I S ++ + + +G A+ + +L+ DP +A
Sbjct: 154 QPKQNLTVVQQRPTPTKPIMSPQEYFTQLLEKAEKGDTRQALEDLNWVLQVDPQDAQAYC 213
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG R Q AI+DF +A+Q N ++ RG+ R LG+ AI D ++AL+ +
Sbjct: 214 CRGVVRYKQGNYREAIADFNQALQLNFQDAIVYRNRGRTRFQLGDHQGAITDFNQALQIK 273
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P A + RG V ++ +AV D + ++++ ++ AY GLA + + E ++A
Sbjct: 274 PEDALLYIARGNVYRAMGNYVSAVTDYTKALQINPDDPQAYYNRGLAYAHMEEMQRAIAD 333
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHG 597
+ +A + F E +D N E +E L+++ I+ + ++ LR LL
Sbjct: 334 YQQAASI---FCEK--------EDWKNYEHVVESLKKIQSPSIESKQTQYNMLRQRLLRL 382
Query: 598 LGQHKKAIKDLSSGSRTMMPHL 619
+G + + + L ++ P +
Sbjct: 383 VGGYWEIAQRLIDQAKRYYPGM 404
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
D + RG+ K KD+ A+ + + ++++ A+ GLA GE A + +A
Sbjct: 3 DDFYNRGLARAKQKDYAGAIAEFTRAIEINPHFADAFCQRGLAYYDSGEILLAVSDYTEA 62
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+QL+ +EA+ L N AL QV+ +++ + AY+LRG++ +G+
Sbjct: 63 LQLNTESVEAYYCRALARVALKNFPGALADANQVIRLNRNHAAAYNLRGIIYRKMGRVHD 122
Query: 604 AIKDL 608
AI +
Sbjct: 123 AIANF 127
>gi|449068029|ref|YP_007435111.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
gi|449070302|ref|YP_007437383.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036537|gb|AGE71963.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
gi|449038810|gb|AGE74235.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
Ron12/I]
Length = 420
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
+ +RG+A N Y+ AI FD+ ++ +P + + AL G+ A +L
Sbjct: 47 YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 106
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI +F EAI+ +P E ++G A LG EA+ + A++ P + + + + I
Sbjct: 107 ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 166
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ ++ ++L+ +N + Y L L S+G+ K+A + KAI L+
Sbjct: 167 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 226
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
E + ++L + L+ + + + YH R G+L + LG+++KA+ +L
Sbjct: 227 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 285
Query: 611 GSR 613
R
Sbjct: 286 SVR 288
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+A G+ A+ + +K +P PE + Q + AI++ A
Sbjct: 125 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 184
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + R+ ++G+ EA+ L KA+ P A+ H++G++ + K ++
Sbjct: 185 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 244
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D +KL N + G+ +G+Y+KA ++++L+ N E L
Sbjct: 245 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 304
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----LSSGSRTMMP 617
+ E A+E + + +D + + Y+ +G L L ++ KAIK+ +S +P
Sbjct: 305 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 364
Query: 618 H 618
H
Sbjct: 365 H 365
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAIS 436
++ + I ++ KY AI+ D ++ +P + +AL+ + + L+ A+
Sbjct: 159 EYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGK-----LKEALD 213
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+AI NP E + ++G L + ++D A++ PN+ + +G++ ++
Sbjct: 214 QLDKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPEYHFRKGVLYYEL 273
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ AV +L V+L+ N + LGLAL + Y+ A E KA++LD + + +
Sbjct: 274 GKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYY 333
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L +KA++ + + ++ ++ +G++L LG++++AI +L
Sbjct: 334 KGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEA 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+ GKY A+ ++ ++ +P PE G A E A+ +F +A
Sbjct: 261 EYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKA 320
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P + + +G A AL + +AI++ KA+ PN +++G+V +
Sbjct: 321 VKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEE 380
Query: 502 AVEDLSACVKLDKENKS 518
A+ +L +KL+ +N+
Sbjct: 381 AIVELDEAIKLNPDNQQ 397
>gi|425445382|ref|ZP_18825414.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9443]
gi|389734631|emb|CCI01737.1| Similar to tr|Q55362|Q55362 [Microcystis aeruginosa PCC 9443]
Length = 266
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ + +G YA A + + +++ + P P RG AR +LE AI+DF +AI P
Sbjct: 42 KALEATEKGDYAQAENYWTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A + + RG A G+ EAI D +K LE PN A + RG D+ AAV+D
Sbjct: 102 DAPDPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+L A L LAL +G Y +A
Sbjct: 162 RQATQLAPNFAWAQANLALALYELGRYPEA 191
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELA 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TE + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 59 WTELVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEG 118
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ D + ++L + AY G A +G+++ A + + +A QL NF A +L
Sbjct: 119 KYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANL 178
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L +A++ ++ + F +L GQ +A
Sbjct: 179 ALALYELGRYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEA 225
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ P A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELAPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 435
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG +A Q +LE AI +F +A++ NP EA+ RRG AR LG+ AI D S+AL P
Sbjct: 8 RGREKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRVNP 67
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA---- 536
D R + + A++ED +++D ++AY G A +G+ K+A
Sbjct: 68 EHLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDGNREAAYKLQGTAYRRLGKTKEAIASF 127
Query: 537 -EEAHLKAIQLDRN---------------------FLEAWGHLTQFYQDLANSE--KALE 572
+ A L Q D++ E +LTQ L + +ALE
Sbjct: 128 KQAAKLYLDQKDKDNCQSCLESIKQIQSAQIQAASAAETQKYLTQVINKLQQGKHREALE 187
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
Q +L++ ++AY RG++ LG + A++DL
Sbjct: 188 DCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLG 224
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ D + P+ A+ RG R+ LG A++DL +A++ +PN + H RG V
Sbjct: 185 ALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVR 244
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D+ A+ D + ++L +N Y G A S +G+Y++ E + + + + N +
Sbjct: 245 IELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQPNDPQI 304
Query: 554 WGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ H D + + A + QQ LY +K+ + YH L Q K+ I
Sbjct: 305 YYHRAAARADFQDYQGAADDYQQAANLYFEKQDWQKYH------QALNQQKQQI 352
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + G A+ + ++ DP + RG R + AI+DFT+ ++ P
Sbjct: 206 RGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQP 265
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RGQA + LG+ + I+D S+ L +PN I + R F+D+ A +D
Sbjct: 266 DNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDY 325
Query: 507 SACVKL 512
L
Sbjct: 326 QQAANL 331
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++ I ++ +GK+ A+ +L P A RG R+ L A+ D A+Q
Sbjct: 170 LTQVINKLQQGKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQL 229
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + RG+ R LG+ AI D ++ LE +P+++ RG K D+ +E
Sbjct: 230 DPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIE 289
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D S + + + Y + A + +Y+ A + + +A L
Sbjct: 290 DYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDYQQAANL 331
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 34/162 (20%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ +A G+ AIQ+ +AL P A+ + RG+ F D +A+ D S ++++
Sbjct: 8 RGREKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRVNP 67
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ +Y LA + GE ++ +LE
Sbjct: 68 EHLDSYLGRSLAYLAQGE----------------------------------AQASLEDA 93
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMM 616
QQVL ID AY L+G LG+ K+AI ++ +
Sbjct: 94 QQVLQIDGNREAAYKLQGTAYRRLGKTKEAIASFKQAAKLYL 135
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 62/160 (38%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EA++D L PN A RGI+ K + A+EDL ++LD + Y
Sbjct: 180 GKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHY 239
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G +G+Y+ A + ++L + + + Q Y L + + +E + L I
Sbjct: 240 RGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQP 299
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWN 622
+ Y+ R ++ A D + W
Sbjct: 300 NDPQIYYHRAAARADFQDYQGAADDYQQAANLYFEKQDWQ 339
>gi|170747494|ref|YP_001753754.1| hypothetical protein Mrad2831_1062 [Methylobacterium radiotolerans
JCM 2831]
gi|170654016|gb|ACB23071.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
2831]
Length = 290
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ F + ++ DP A R A R R+ A+ DF++AI
Sbjct: 73 TRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRD-GPALQDFSKAIGI 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ G A+ R A G +A+ DL+ A+ P SA H RG+V K A+
Sbjct: 132 DPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVKQKQGQDTQAIA 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D A + D + Y G +L + +Y KA E + A+ ++ +W + Y+
Sbjct: 192 DFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATSWAYRGLAYEKQ 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++A+E Q+ ID + A G + G+G
Sbjct: 252 GQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVG 286
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++++ +P A RG A A + AI+DFT+AIQ +P++ A+ R A
Sbjct: 54 IASLTEVVQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G A+QD SKA+ +PN R V + + A+ DL+ ++L E+ AY
Sbjct: 114 QIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KALECLQQVL 578
GL G+ +A AI DR+ A + + +A ++ KA+E L
Sbjct: 174 HARGLVKQKQGQDTQAIADFDAAI--DRDPFVAAPYAARGQSLIATNQYAKAIEDYNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
++ + + ++ RGL GQ K+A+++ S T+ P+
Sbjct: 232 NVNAKDATSWAYRGLAYEKQGQRKEAMENYQRAS-TIDPN 270
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 21/223 (9%)
Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK------ 375
NT +Y+++ ++ +D T K L S A N+ +I +
Sbjct: 72 NTRGAAYARAGQFNDAIADFT--------KAIQLDPNSASAYNNRALANRQIGRDGPALQ 123
Query: 376 --SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
SK+I +D + R + +G A++ + ++ P +A RG + Q
Sbjct: 124 DFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVKQKQ 183
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+DF AI +P + RGQ+ A + +AI+D + AL A
Sbjct: 184 GQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATSWAY 243
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
RG+ K A+E+ +D N A LG +G
Sbjct: 244 RGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVG 286
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + L+ V+ + + +AY G A + G++ A KAIQLD N A+ +
Sbjct: 51 NVNIASLTEVVQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + AL+ + + ID + AY R + G +A+ DL+
Sbjct: 111 ANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLN 160
>gi|218245568|ref|YP_002370939.1| hypothetical protein PCC8801_0698 [Cyanothece sp. PCC 8801]
gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 784
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTE 440
F++ I +N Y A+ I P Y + +G R +Q E AI +
Sbjct: 253 FKVGYPIEGINS--YYEAVDI-------SPNYIQVWERLGFILFRIYQYE--EAIFCLDK 301
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P+ +W RG ++LG EA++ L +ALE PN + I +G + + +++
Sbjct: 302 VINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQ 361
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + ++LD EN + G LS + +Y++A + KA+++ N+ EAWG
Sbjct: 362 QALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMRGVI 421
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+L ++AL +++ I+ + + RG+ L L +H++A+K L+
Sbjct: 422 LVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKA 472
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ DP E +G + ++ E A++ F +A++ + + EAW R
Sbjct: 359 EYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMR 418
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L +A+ K +E PN RGI K A++ L+ ++++ +
Sbjct: 419 GVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINSD 478
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+ L ++G Y++A E+ AI+LD N W H L ++AL+CL
Sbjct: 479 DDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCLD 538
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L ID +G L+ L +++A+
Sbjct: 539 KALEIDPNDHNTLIEKGNTLYLLQCYEQAL 568
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 110/239 (46%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FC+ ++ K RG+ + G+ A+ DQ L+ +P +G
Sbjct: 297 FCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQ 356
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E + A+ F +++ +P E W +G+ + L + EA+ KALE N +
Sbjct: 357 LEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWG 416
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG++ + + A+ ++++ + + G+AL + +++A ++ KA++++
Sbjct: 417 MRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEIN 476
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ WG+ ++L + ++ALE + +D + + +G+ L L Q+++A+K
Sbjct: 477 SDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALK 535
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 103/218 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI D+++ P + RG + LE A+ +A++ NP+ W +
Sbjct: 291 QYEEAIFCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNK 350
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L E +A+ +++LE +P + +I + +G V + K + A+ +++
Sbjct: 351 GKLLNQLEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSN 410
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L ++ YK+A + K I+++ N + W + L ++AL+ L
Sbjct: 411 YYEAWGMRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLN 470
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ L I+ + +G++L LG +++A++ + +
Sbjct: 471 KALEINSDDDMIWGNKGVVLRNLGHYQEALESFDNAIK 508
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 34/265 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ VN Y A+ FD++++ +P + + RG A + + + A+ +A++ N
Sbjct: 418 RGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINS 477
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W +G LG EA++ A++ + N+ +GI K K + A++ L
Sbjct: 478 DDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCL 537
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHL------ 557
+++D + + G L + Y++A + KAI+++ N + W G+L
Sbjct: 538 DKALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNPNDSDDWNACGYLLLNQSS 597
Query: 558 ---------------------TQFYQDLANS---EKALECLQQVLYIDKRFSKAYHLRGL 593
Q + L N ++AL + + + +S + R
Sbjct: 598 ANDQPVFDIPLEIIPIVNSKNNQLNESLNNQKSYQEALSYFDKAIELKPDYSLVFANRSF 657
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPH 618
L+ LG++++A+K + + PH
Sbjct: 658 PLYYLGEYQEALKSCIKAIK-LKPH 681
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 76/152 (50%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G +G +E I +A++ PN + G + F+ + A+ L + +
Sbjct: 247 KKGNLLFKVGYPIEGINSYYEAVDISPNYIQVWERLGFILFRIYQYEEAIFCLDKVINIK 306
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ S++ GL LSS+G ++A E+ +A++++ N WG+ + L ++AL
Sbjct: 307 PNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLS 366
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L +D + ++L+G +L L ++++A+
Sbjct: 367 FNRSLELDPENDEIWYLKGKVLSELKKYEEAL 398
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSA--CVK--------LDKENKSAYTY----- 522
FE ++ L ++ I + K K + ++DLS C K LD++N ++Y
Sbjct: 185 FEFSTDKELLDKAIEDIKNKLEDHDIDDLSIEECKKRILEIDAILDEDNNNSYVADKPKL 244
Query: 523 ---LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
G L +G + ++ +A+ + N+++ W L + E+A+ CL +V+
Sbjct: 245 LFKKGNLLFKVGYPIEGINSYYEAVDISPNYIQVWERLGFILFRIYQYEEAIFCLDKVIN 304
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
I ++HLRGL L LG+ ++A++ L
Sbjct: 305 IKPNDDSSWHLRGLCLSSLGRLEEALESLDQA 336
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 378 SISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+I +DF +GI + +Y A+ D+ L+ DP LI +G + E
Sbjct: 506 AIKLDFNNDRGWFHKGITLIKLKQYQEALKCLDKALEIDPNDHNTLIEKGNTLYLLQCYE 565
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK-ALEFEP--NSADILHER 489
A+ F +AI+ NP+ + W G L +S Q + LE P NS +
Sbjct: 566 QALISFKKAIEVNPNDSDDWNACG--YLLLNQSSANDQPVFDIPLEIIPIVNSKNNQLNE 623
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ N K + A+ ++L + + L +GEY++A ++ +KAI+L
Sbjct: 624 SLNNQK--SYQEALSYFDKAIELKPDYSLVFANRSFPLYYLGEYQEALKSCIKAIKL 678
>gi|421595466|ref|ZP_16039498.1| peptidase C14 caspase catalytic subunit p20 [Bradyrhizobium sp.
CCGE-LA001]
gi|404272412|gb|EJZ36060.1| peptidase C14 caspase catalytic subunit p20 [Bradyrhizobium sp.
CCGE-LA001]
Length = 494
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AAI +EAI+ +P A+ RG A +A G++ AI D S + +P A+ + R
Sbjct: 28 EASAAIVAASEAIRRDPRDANAYYNRGNAYSARGDTDRAIADYSATIRLDPAHANAHYNR 87
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G D A+ D +A ++LD +AY G A S+ G+ +A + +A++L
Sbjct: 88 GNAYSNKGDTERAIADYTATIRLDPAYANAYYNRGNAYSNKGDTGRAIADYTEAVRLQPT 147
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y + +S++A+ + L +D ++ AY RGL G +A D +
Sbjct: 148 NANAYFNRGNAYGNKGDSDRAIADYTEALRVDPTYANAYVNRGLAYEKRGDFARARADFN 207
Query: 610 SGSRTMMPHLIWNLTRWR 627
+ W L + R
Sbjct: 208 ATLGLTQSATKWALDKAR 225
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 373 ISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
++ S++I D R +RG A G AI+ + ++ DP + A RG A +
Sbjct: 34 VAASEAIRRDPRDANAYYNRGNAYSARGDTDRAIADYSATIRLDPAHANAHYNRGNAYSN 93
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E AI+D+T I+ +P+ A+ RG A + G++ AI D ++A+ +P +A+
Sbjct: 94 KGDTERAIADYTATIRLDPAYANAYYNRGNAYSNKGDTGRAIADYTEAVRLQPTNANAYF 153
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
RG D + A+ D + +++D +AY GLA G++ +A
Sbjct: 154 NRGNAYGNKGDSDRAIADYTEALRVDPTYANAYVNRGLAYEKRGDFARA 202
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N+G AI+ + ++ DP Y A RG A + + + AI+D+TEA++
Sbjct: 86 NRGNAYSNKGDTERAIADYTATIRLDPAYANAYYNRGNAYSNKGDTGRAIADYTEAVRLQ 145
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A G+S AI D ++AL +P A+ RG+ K DF A D
Sbjct: 146 PTNANAYFNRGNAYGNKGDSDRAIADYTEALRVDPTYANAYVNRGLAYEKRGDFARARAD 205
Query: 506 LSACVKL 512
+A + L
Sbjct: 206 FNATLGL 212
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI + ++ DP A RG A + + + + AI+D++ I+ +P+ A RG A
Sbjct: 31 AAIVAASEAIRRDPRDANAYYNRGNAYSARGDTDRAIADYSATIRLDPAHANAHYNRGNA 90
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ G++ AI D + + +P A+ + RG D A+ D + V+L N +
Sbjct: 91 YSNKGDTERAIADYTATIRLDPAYANAYYNRGNAYSNKGDTGRAIADYTEAVRLQPTNAN 150
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AY G A + G+ +A + +A+++D + A+
Sbjct: 151 AYFNRGNAYGNKGDSDRAIADYTEALRVDPTYANAY 186
>gi|15679902|ref|NP_275211.1| hypothetical protein MTH68, partial [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 228
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 89/178 (50%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F++ ++ +P A +G + E A+ + + +Q NP +AW +G LG
Sbjct: 24 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 83
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+++ KAL+ P A+ + +G+V + + A+E +++D E+ +
Sbjct: 84 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 143
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
GL L +G+YK A E KA++++ F +AW +DL E++L+C ++ L ++
Sbjct: 144 GLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLN 201
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +AI+ NP AW +G L EA++ K L+ P + +G+V +
Sbjct: 24 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 83
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ ++E ++++ + A+ G+ LS +G Y++A E + KA+++D + W +
Sbjct: 84 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 143
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSS 610
++L + ALEC Q+ L I+ F+ A+ +G++L L + +KKA+K L+
Sbjct: 144 GLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALK-LNP 202
Query: 611 GSRTMMPHLIWNLTRWR 627
+ M H N T+ R
Sbjct: 203 PKQNTMVHARKNTTKTR 219
Score = 48.1 bits (113), Expect = 0.015, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ G+Y ++ +++ L+ +P EA +G + E A+ + +A++ +
Sbjct: 74 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEID 133
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P + W +G LG+ +A++ KALE P AD +GI+
Sbjct: 134 PEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGII 180
Score = 43.9 bits (102), Expect = 0.33, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L+ + +A++ D +L + + N+ +++L + + +KALQ++P L +
Sbjct: 45 LHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAE 104
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ KG S LGR EEAL +EK E
Sbjct: 105 AWNNKGVVLSELGRYEEALECYEKALE 131
Score = 40.4 bits (93), Expect = 3.9, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ G+Y A+ +++ L+ DP + +G + + A+ F +A++ N
Sbjct: 108 NKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEIN 167
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-ILHER 489
P +AWK +G L + E+++ KAL+ P + ++H R
Sbjct: 168 PEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMVHAR 212
>gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 660
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA-IQS 444
SRG+++ N G Y AI F++ L+ DP + +A R + A AI DF + I+
Sbjct: 110 SRGVSKYNLGLYEEAIKDFNKTLELDPDFKDAYFIRALSYAKINSHNEAIDDFNKLLIEY 169
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG ++ L EAI+D + AL+ PN + I ++R + F A+
Sbjct: 170 DEINYIYYYYRGLSKFNLNLFEEAIKDFTIALDDLPNESYIYYDRALAYSNLNMFENAIN 229
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+K + +Y L S + EY KA E + K ++L+ N EA ++ Q+L
Sbjct: 230 DYNRVIELNKNDIDSYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNL 289
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E+A++ ++ D F Y+ G+ L ++++AI + +
Sbjct: 290 ELFEEAIKDFNNIIDSDNIF--VYYSLGICYLELERYEEAIDNFDA 333
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I S +I V + L GI + +Y AI FD +K +P YP+A RG A+ +
Sbjct: 299 FNNIIDSDNIFVYYSL--GICYLELERYEEAIDNFDAFIKLNPDYPDAYFYRGNAKYDLK 356
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL---EFEPNSADIL 486
E AI D+ + ++ + +A+ R + L +AI+D +AL + + + A +
Sbjct: 357 HYEEAIDDYNKTLELDKLYIDAYYERAMVKINLNLYDDAIKDFDEALYNIDSDSDRAYLF 416
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + IV K ++ A+E+ + ++L + Y +A + G K++ + + KAI L
Sbjct: 417 YLKAIVYEILKKYDEAIENYTNAIELGND---CYYKRAIAKHNAGLVKESIDDYNKAIDL 473
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + E + + DL E+A++ + + ++ F +AY+ RG+ L ++++ K
Sbjct: 474 EPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIANDALKNYEESFK 533
Query: 607 DLSSGSRTMMPH 618
D + H
Sbjct: 534 DYKMTVKLNEQH 545
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 5/226 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ N Y ++ FD+ L+ + Y A RG ++ E AI DF + ++ +P
Sbjct: 78 GTSKCNLKMYEESLKYFDKTLELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPD 137
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R + A + EAI D +K L E++ + + RG+ F F A++D
Sbjct: 138 FKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDF 197
Query: 507 SACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + LD +Y Y LA S++ ++ A + + I+L++N ++++ + Y L
Sbjct: 198 T--IALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIELNKNDIDSYYNRALTYSKL 255
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+KA+E +VL ++ +A + L L ++AIKD ++
Sbjct: 256 EEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNLELFEEAIKDFNN 301
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A+ ++ +I D+ +AI P E + +G A L EAI+D KA+E P
Sbjct: 450 RAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNP 509
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + RGI N K++ + +D VKL++++ A+ LG + EY KA E
Sbjct: 510 NFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENF 569
Query: 541 LKAIQLD 547
KA++++
Sbjct: 570 YKALEIN 576
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD- 437
+ +D R + ++N Y AI FD+ L I + RA+ L+A + +
Sbjct: 374 LYIDAYYERAMVKINLNLYDDAIKDFDEALYN--------IDSDSDRAYLFYLKAIVYEI 425
Query: 438 ---FTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ EAI++ +A E + +R A+ G E+I D +KA++ EP++ +I +G
Sbjct: 426 LKKYDEAIENYTNAIELGNDCYYKRAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKG 485
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A++D ++L+ AY G+A ++ Y+++ + + ++L+
Sbjct: 486 NAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQH 545
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ +L +Y L +KALE + L I+ S Y+ G
Sbjct: 546 DYAFNNLGSYYVRLKEYDKALENFYKALEINSELSLPYNNIG 587
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R IA+ N G +I +++ + +P E +G A E AI DF +AI+ NP
Sbjct: 450 RAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNP 509
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A AL E+ +D ++ + G + K+++ A+E+
Sbjct: 510 NFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENF 569
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYK 534
++++ E L L ++IGE K
Sbjct: 570 YKALEINSE-------LSLPYNNIGEVK 590
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 26/169 (15%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAF-----CYSQLELHKHVIRDCDKALQLDPT 101
C+L+ + ++++ D L E+ D A+ L L++ I+D +K L+LDP
Sbjct: 82 CNLKMYEESLKYFDKTL----ELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPD 137
Query: 102 LLQAYILKGCAFSALGRKEEALSVWEK--------GYEHALHQSA---DLKQFLELEELL 150
AY ++ +++ + EA+ + K Y + ++ +L F E +
Sbjct: 138 FKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDF 197
Query: 151 TAAKQD--RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDI 197
T A D YD + + S+L + E+ +N +++ E NK+DI
Sbjct: 198 TIALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIEL----NKNDI 242
>gi|218672661|ref|ZP_03522330.1| TPR repeat-containing protein [Rhizobium etli GR56]
Length = 180
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 78/167 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + N G+ A AI+ ++ L+ +P Y A IGRG + + A +DF AIQ
Sbjct: 1 RALVYRNMGQQAQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDQAFNDFDRAIQLGT 60
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G A+ RG + +AI D SKA+ PNSA+ + RGI D + A D
Sbjct: 61 TDGRAYHNRGLIYQKRNQQDKAIDDFSKAISLAPNSAEPYNGRGISYIALNDDDNAFADF 120
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++L+ ++ L G+ KA ++ AI LD + A
Sbjct: 121 NHAIELNGNIAESWANQALVYERRGDKAKAARSYRHAIGLDPKYQPA 167
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 69/154 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+D+ A+Q NPS A+ RG G+ +A D +A++ H RG++
Sbjct: 14 AIADYNAALQINPSYDVAYIGRGNVYRMAGQDDQAFNDFDRAIQLGTTDGRAYHNRGLIY 73
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K + A++D S + L + Y G++ ++ + A AI+L+ N E+
Sbjct: 74 QKRNQQDKAIDDFSKAISLAPNSAEPYNGRGISYIALNDDDNAFADFNHAIELNGNIAES 133
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
W + Y+ + KA + + +D ++ A
Sbjct: 134 WANQALVYERRGDKAKAARSYRHAIGLDPKYQPA 167
>gi|282895612|ref|ZP_06303746.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
gi|281199452|gb|EFA74316.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
Length = 461
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RGI ++ + Y +++ DQ +K DP Y EA RG A ++ R E A+ DF +
Sbjct: 298 DF-YARGITKLEQFNYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQV 356
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I +P+ + + RG L A++D ++ + PN A+ +G+ K + A
Sbjct: 357 IALDPNYLDGYLNRGWTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQGMAYIKLGKYQA 416
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
A+E ++LD YT G + + +Y A AI+
Sbjct: 417 ALESSKQAIRLDPNKSYGYTIQGDVFNYLKDYPAAINVSTFAIK 460
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + Q + +++D +AI+ +P EA+ +RG A + L EA+ D ++ + +P
Sbjct: 302 RGITKLEQFNYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDP 361
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D RG ++ AA+ED + ++++ AY + G+A +G+Y+ A E+
Sbjct: 362 NYLDGYLNRGWTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQGMAYIKLGKYQAALESS 421
Query: 541 LKAIQLDRNFLEAWGHLTQ 559
+AI+LD N +++G+ Q
Sbjct: 422 KQAIRLDPN--KSYGYTIQ 438
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P SA + RGI + ++ ++ DL +K+D + AY G ALS + Y++A
Sbjct: 293 PQSARDFYARGITKLEQFNYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLD 352
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ I LD N+L+ + + Y L N + ALE +V+ I+ +++AY +G+ LG
Sbjct: 353 FNQVIALDPNYLDGYLNRGWTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQGMAYIKLG 412
Query: 600 QHKKAIK 606
+++ A++
Sbjct: 413 KYQAALE 419
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRA 76
+++ ++D+ +++D A A R L LR + +A+ + ++A D NR
Sbjct: 314 ESLADLDQAIKIDPKYAEAYFKR--GYALSWLRRYEEALLDFNQVIALDPNYLDGYLNRG 371
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ Y L+ + + D ++ ++++P +AY +G A+ LG+ + AL
Sbjct: 372 WTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQGMAYIKLGKYQAAL 418
>gi|434387717|ref|YP_007098328.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018707|gb|AFY94801.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 201
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G + Q + AI+D+TE ++SNP+ E + RG ARA + AIQD ++ALE
Sbjct: 52 LLEQGHKKQEQEDFVGAIADYTEFLKSNPNHVEGYSNRGFARAMTNDLQGAIQDFNRALE 111
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
PN+AD+ + RG VN + +A++ D + ++ D+ AY ++ S+G+ + A
Sbjct: 112 ISPNNADVYNARGNVNAMVGNLSASIRDFNRAIRCDRNFADAYYNRAISRHSLGDRRGA- 170
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+LD L L Q +DL ++A E + ++
Sbjct: 171 -------KLD---LSQAAKLFQQQKDLGGYQQAREWIDKL 200
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G + + + AI+ + + LK +P + E RG ARA +L+ AI DF A++
Sbjct: 53 LEQGHKKQEQEDFVGAIADYTEFLKSNPNHVEGYSNRGFARAMTNDLQGAIQDFNRALEI 112
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + + RG A +G +I+D ++A+ + N AD + R I D A
Sbjct: 113 SPNNADVYNARGNVNAMVGNLSASIRDFNRAIRCDRNFADAYYNRAISRHSLGDRRGAKL 172
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
DLS KL ++ K +G Y++A E
Sbjct: 173 DLSQAAKLFQQQK-----------DLGGYQQARE 195
Score = 45.8 bits (107), Expect = 0.081, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T KS V+ +RG A+ AI F++ L+ P + RG A
Sbjct: 73 TEFLKSNPNHVEGYSNRGFARAMTNDLQGAIQDFNRALEISPNNADVYNARGNVNAMVGN 132
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
L A+I DF AI+ + + +A+ R +R +LG+ A DLS+A + D+
Sbjct: 133 LSASIRDFNRAIRCDRNFADAYYNRAISRHSLGDRRGAKLDLSQAAKLFQQQKDL 187
Score = 39.7 bits (91), Expect = 6.1, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 456 GQARAALGE----SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
G+A+ A+G E S+A N+ L E+G + +DF A+ D + +K
Sbjct: 20 GRAQIAMGYVANYETERQSQWSQASPIPTNTK--LLEQGHKKQEQEDFVGAIADYTEFLK 77
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + Y+ G A + + + A + +A+++ N + + + N ++
Sbjct: 78 SNPNHVEGYSNRGFARAMTNDLQGAIQDFNRALEISPNNADVYNARGNVNAMVGNLSASI 137
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+ + D+ F+ AY+ R + H LG + A DLS ++
Sbjct: 138 RDFNRAIRCDRNFADAYYNRAISRHSLGDRRGAKLDLSQAAK 179
>gi|239948048|ref|ZP_04699801.1| tetratricopeptide repeat-containing protein [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922324|gb|EER22348.1| tetratricopeptide repeat-containing protein [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 389
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G + N GKY I FD LK + YPEA +G + + + AI ++ AI+
Sbjct: 157 NKGNSLNNLGKYQETIENFDLALKYNSRYPEAYYNKGISLMSLWQHQEAIENYDLAIKYK 216
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ +G LG+ EAI A++++PN + + + I K ++ A+E+
Sbjct: 217 PDYADAYNNKGATLINLGKYTEAIDTCDIAIKYQPNCVEAYYNKAISLNILKKYHEAIEN 276
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+K D ++Y G+AL +G+Y++A + + AI+ ++ E++
Sbjct: 277 CDLAIKYDPNYIASYLEKGIALRKLGKYQEAIKNYDLAIKYKSDYAESY 325
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI GKY AI +D +K +P EA +G + + AI+ + AI N
Sbjct: 89 SKGIIFNKLGKYQEAIKNYDLSIKYNPHCAEAYNNKGNVLNTIGQYQEAITLYDIAINYN 148
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S EA+ +G + LG+ E I++ AL++ + + +GI A+E+
Sbjct: 149 ASFAEAYNNKGNSLNNLGKYQETIENFDLALKYNSRYPEAYYNKGISLMSLWQHQEAIEN 208
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + AY G L ++G+Y +A + AI+ N +EA+ + L
Sbjct: 209 YDLAIKYKPDYADAYNNKGATLINLGKYTEAIDTCDIAIKYQPNCVEAYYNKAISLNILK 268
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+A+E + D + +Y +G+ L LG++++AIK+
Sbjct: 269 KYHEAIENCDLAIKYDPNYIASYLEKGIALRKLGKYQEAIKN 310
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 88/171 (51%)
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D IQ + E + G++ LGE EAI++ A++++P A + +GI+ K
Sbjct: 38 DSQNKIQDPNTLAEEYFNIGKSLYKLGEYQEAIKNYDLAIKYKPYYAIAYNSKGIIFNKL 97
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+++ +K + AY G L++IG+Y++A + AI + +F EA+ +
Sbjct: 98 GKYQEAIKNYDLSIKYNPHCAEAYNNKGNVLNTIGQYQEAITLYDIAINYNASFAEAYNN 157
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+L ++ +E L + R+ +AY+ +G+ L L QH++AI++
Sbjct: 158 KGNSLNNLGKYQETIENFDLALKYNSRYPEAYYNKGISLMSLWQHQEAIEN 208
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K D ++G +N GKY AI D +K P EA + + ++ A
Sbjct: 214 KYKPDYADAYNNKGATLINLGKYTEAIDTCDIAIKYQPNCVEAYYNKAISLNILKKYHEA 273
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I + AI+ +P+ ++ +G A LG+ EAI++ A++++ + A+ E+GI
Sbjct: 274 IENCDLAIKYDPNYIASYLEKGIALRKLGKYQEAIKNYDLAIKYKSDYAESYLEKGIT 331
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 44 AKLCSLRNWSKAIRILDSLLAQSYE---IQDICNRAFCYSQLELHKHVIRDCDKALQLDP 100
A L +L +++AI D +A Y+ ++ N+A + L+ + I +CD A++ DP
Sbjct: 228 ATLINLGKYTEAIDTCD--IAIKYQPNCVEAYYNKAISLNILKKYHEAIENCDLAIKYDP 285
Query: 101 TLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQ-FLE 145
+ +Y+ KG A LG+ +EA+ K Y+ A+ +D + +LE
Sbjct: 286 NYIASYLEKGIALRKLGKYQEAI----KNYDLAIKYKSDYAESYLE 327
>gi|409990680|ref|ZP_11274022.1| hypothetical protein APPUASWS_06903 [Arthrospira platensis str.
Paraca]
gi|409938457|gb|EKN79779.1| hypothetical protein APPUASWS_06903 [Arthrospira platensis str.
Paraca]
Length = 231
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 79/178 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L R + G++ A S + +I+ P P RG R Q L AI D+
Sbjct: 1 MDELLERAFSTSQAGRFPEAESYWTEIINRYPDNPAMWSNRGNVRVSQNRLTEAIGDYNR 60
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ P+A +A+ RG A LG +AI D ++ LE P+ A + RG K++
Sbjct: 61 AIELAPTAADAYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNAEAGQKNWE 120
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
AA+ D +LD A LAL GE K+A I+ NF + LT
Sbjct: 121 AAIADYFQAAELDPNYAFARANYALALYESGETKEAIRNIKNLIRKYPNFADMRAALT 178
Score = 55.8 bits (133), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D L+RG+A G+++ AI+ +++ L+ P A RG A A Q+ EAAI+D+
Sbjct: 68 AADAYLNRGVAYEGLGRWSDAIADYNRTLELSPSDAIAYNNRGNAEAGQKNWEAAIADYF 127
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+A + +P+ A A GE+ EAI+++ + PN AD+
Sbjct: 128 QAAELDPNYAFARANYALALYESGETKEAIRNIKNLIRKYPNFADM 173
>gi|443327964|ref|ZP_21056570.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442792468|gb|ELS01949.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 774
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +++G + + Y AI++FDQ L+ P +A RG A + E AI+ F +A
Sbjct: 525 DF-IAQGNQLLEQENYQEAIALFDQALELQPENAQAWNQRGIALRDLKRYEGAIAAFGKA 583
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ PS EAW RG + + +AI + KA+ +P+ +RG+ +
Sbjct: 584 LKIQPSFAEAWCNRGITYSRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEP 643
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A E V++ N A+ G++L + +++ + KA++L+ +AW +
Sbjct: 644 AFESFDHAVEVQPGNAVAWMNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNIL 703
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
L E AL + L + +++AY+ R + Q + AIK+L +
Sbjct: 704 IKLEEYEAALVSCDRTLELQSDYAQAYYNRAICYAMFNQVELAIKNLKQAVK 755
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 15/232 (6%)
Query: 389 IAQVNEGKY-ASAISIFDQ----------ILKED-PMY---PEALIGRGTARAFQRELEA 433
+AQ+ ++ A+A+S +Q IL+++ P + P+ I +G Q +
Sbjct: 482 LAQITPQEFSATALSQIEQDIQTLREPLEILQQNQPQWFQKPDDFIAQGNQLLEQENYQE 541
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ F +A++ P +AW +RG A L AI KAL+ +P+ A+ RGI
Sbjct: 542 AIALFDQALELQPENAQAWNQRGIALRDLKRYEGAIAAFGKALKIQPSFAEAWCNRGITY 601
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ K + A+ + V + + A+ G+A + ++ A E+ A+++ A
Sbjct: 602 SRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEPAFESFDHAVEVQPGNAVA 661
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W + + L+ E++L + + ++ + +KA++ RG +L L +++ A+
Sbjct: 662 WMNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNILIKLEEYEAAL 713
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + +Y AI+ F + LK P + EA RG + + + AI+++ +A+ P
Sbjct: 563 RGIALRDLKRYEGAIAAFGKALKIQPSFAEAWCNRGITYSRMKRYQDAIANYDKAVAIQP 622
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A L A + A+E +P +A RG+ ++
Sbjct: 623 DYYQAWVDRGVAFGMLRRHEPAFESFDHAVEVQPGNAVAWMNRGMSLEMLSRDEESLASF 682
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V+L+ + A+ Y G L + EY+ A + + ++L ++ +A+ + Y
Sbjct: 683 DKAVELNPKLAKAWNYRGNILIKLEEYEAALVSCDRTLELQSDYAQAYYNRAICYAMFNQ 742
Query: 567 SEKALECLQQVLYIDKRF 584
E A++ L+Q + ++ ++
Sbjct: 743 VELAIKNLKQAVKLNPKY 760
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 364 RNKKF--CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
R K++ + K+ +I D+ + RG+A ++ A FD ++ P A
Sbjct: 603 RMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEPAFESFDHAVEVQPGNAVAW 662
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG + E +++ F +A++ NP +AW RG L E A+ + LE
Sbjct: 663 MNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNILIKLEEYEAALVSCDRTLEL 722
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ + A + R I F A+++L VKL+
Sbjct: 723 QSDYAQAYYNRAICYAMFNQVELAIKNLKQAVKLN 757
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
CNR YS+++ ++ I + DKA+ + P QA++ +G AF L R E A + ++H
Sbjct: 595 CNRGITYSRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEPAF----ESFDH 650
Query: 133 ALH 135
A+
Sbjct: 651 AVE 653
>gi|163847351|ref|YP_001635395.1| hypothetical protein Caur_1789 [Chloroflexus aurantiacus J-10-fl]
gi|222525196|ref|YP_002569667.1| hypothetical protein Chy400_1936 [Chloroflexus sp. Y-400-fl]
gi|163668640|gb|ABY35006.1| TPR repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449075|gb|ACM53341.1| TPR repeat-containing protein [Chloroflexus sp. Y-400-fl]
Length = 450
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ N + AI+ F + ++ +P Y AL RG QR E A+ DF I+
Sbjct: 271 FQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFNRTIEL 330
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RGQ L EA+ D ++AL +P+ ++ ERG + +++N A+E
Sbjct: 331 QPDHAWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNYNEALE 390
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L + + G S+ Y++A +AI++D N AW ++ +
Sbjct: 391 DFNRALELSPNDSWVLSRRGATYQSLKIYEEAYIDLTRAIEIDPNNAWAWAQRGSLFRQM 450
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
++ +AI F + + P YP AL RG RA +R EA + DF A+ NP+
Sbjct: 78 RHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALV-DFDAALALNPNLAWIHAE 136
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG++ AL + EAI+ S+AL +P L RGI + +DF AA+ D A + L
Sbjct: 137 RGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAIALQG 196
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y G +++ A +A++LD + A+G ++ + + AL
Sbjct: 197 NMAWLYAERGETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADF 256
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ L +D ++ Y RGLL + +AI D S
Sbjct: 257 NRALELDPGYTWVYFQRGLLHRNTNRTDEAIADFS 291
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ AI F + L DP YP AL RG R+ AAI+DF AI + + R
Sbjct: 146 QHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAIALQGNMAWLYAER 205
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ R + A+ DLS+ALE + A RG D NAA+ D + ++LD
Sbjct: 206 GETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADFNRALELDPG 265
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y GL + +A +AI+L+ N++ A + ++ E+AL
Sbjct: 266 YTWVYFQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFN 325
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIW 621
+ + + + A RG + L ++ +A+ D + + + P ++W
Sbjct: 326 RTIELQPDHAWALGSRGQVYRVLARYDEALADFNR-ALALKPDMVW 370
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ A++ + L+ D Y A RG A +L AA++DF A++ +P + +RG
Sbjct: 215 FEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADFNRALELDPGYTWVYFQRG 274
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ EAI D S+A+E EPN L ERG + + + A+ D + ++L ++
Sbjct: 275 LLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFNRTIELQPDH 334
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A G + Y +A +A+ L + + + ++ L N +ALE +
Sbjct: 335 AWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNYNEALEDFNR 394
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L + S RG L +++A DL+
Sbjct: 395 ALELSPNDSWVLSRRGATYQSLKIYEEAYIDLT 427
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA++DF AI + + A+ +RGQ LG E++ DL++A + EP+ ERG
Sbjct: 12 EAALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAERGE 71
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ AA+E S + L E A G ++ + +A A+ L+ N
Sbjct: 72 TLRMLRRHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALVDFDAALALNPNL- 130
Query: 552 EAWGHLT--QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
AW H + + L ++A+E + L ID + A RG+
Sbjct: 131 -AWIHAERGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGI 173
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 34/245 (13%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A++ F++ + D Y A RG LE ++ D T A P RG+
Sbjct: 13 AALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAERGET 72
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L AI+ S+A+ P L RG V + + A+ D A + L+
Sbjct: 73 LRMLRRHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALVDFDAALALNPNLAW 132
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA------------- 565
+ G +L ++ ++++A EA +A+ +D + A GH Y+++
Sbjct: 133 IHAERGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAI 192
Query: 566 ---------------------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ E AL L + L +D ++ A+ RG +G A
Sbjct: 193 ALQGNMAWLYAERGETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAA 252
Query: 605 IKDLS 609
+ D +
Sbjct: 253 LADFN 257
>gi|428223749|ref|YP_007107846.1| hypothetical protein GEI7407_0290 [Geitlerinema sp. PCC 7407]
gi|427983650|gb|AFY64794.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 437
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+A + + ++ Q ++ AI+DF +Q N + ++ RG AR+ +G+ AI DL++
Sbjct: 175 PQAFLEQAIEKSRQGDVRGAIADFDWLLQINSQDPQVYRHRGVARSKIGDYQGAISDLNQ 234
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL+ P SA + RG++ + KD+ A+ D ++L AY G+A + +++
Sbjct: 235 ALKLSPQSAPTYYSRGVIRCQQKDYRGAIADFDRALELQPGYAPAYVGRGVAHQGLEDHR 294
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ--VLYIDKRFSKAYHLRG 592
A + + +A+QLD EA+ + + A+E Q+ L+ ++ K Y
Sbjct: 295 AALQDYAQALQLDAQDAEAYFSRAITHASYGAHQAAIEDYQRAAALWFEQEEWKRYQQAL 354
Query: 593 LLLHGLGQHKKAIKDLSSGSRTMMPHL 619
+ L Q + ++K S +R M ++
Sbjct: 355 DRVDQLRQQQTSLKASPSAARPGMVYV 381
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + I + +G AI+ FD +L+ + P+ RG AR+ + + AISD +A++
Sbjct: 179 LEQAIEKSRQGDVRGAIADFDWLLQINSQDPQVYRHRGVARSKIGDYQGAISDLNQALKL 238
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + + RG R + AI D +ALE +P A RG+ + +D AA++
Sbjct: 239 SPQSAPTYYSRGVIRCQQKDYRGAIADFDRALELQPGYAPAYVGRGVAHQGLEDHRAALQ 298
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + ++LD ++ AY + +S G ++ A E + +A L
Sbjct: 299 DYAQALQLDAQDAEAYFSRAITHASYGAHQAAIEDYQRAAAL 340
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + + +A+ F + L+ P Y A RG A E+ AA+ D+T+AI
Sbjct: 8 RGIEKAAAEDFQAAVQEFSRALRVRPDYGAAYYQRGLAHFNLGEIAAAVDDYTQAIAHGY 67
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
E W RRG A L + AI D +AL +P+ A
Sbjct: 68 EGAEPWLRRGFAYLTLDQPEAAIADAEQALSCQPSLA 104
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 14/159 (8%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG +A + +AA+ +F+ A++ P G A+ +RG A LGE A+ D ++A
Sbjct: 3 EAFYQRGIEKAAAEDFQAAVQEFSRALRVRPDYGAAYYQRGLAHFNLGEIAAAVDDYTQA 62
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ A+ RG AA+ D + +A++ G A + + +
Sbjct: 63 IAHGYEGAEPWLRRGFAYLTLDQPEAAIADAEQALSCQPSLAAAHSLCGTAHRRLDQTSQ 122
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A + W Q Y D ++ A C+
Sbjct: 123 A--------------IACWKQAAQLYLDQKDAANARRCI 147
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 110/288 (38%), Gaps = 40/288 (13%)
Query: 362 AKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
A + + V S++ + D+ RG+A N G+ A+A+ + Q + E
Sbjct: 14 AAEDFQAAVQEFSRALRVRPDYGAAYYQRGLAHFNLGEIAAAVDDYTQAIAHGYEGAEPW 73
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG A + EAAI+D +A+ PS A G A L ++ +AI +A +
Sbjct: 74 LRRGFAYLTLDQPEAAIADAEQALSCQPSLAAAHSLCGTAHRRLDQTSQAIACWKQAAQL 133
Query: 479 EPNSADILH-------------------------------------ERGIVNFKFKDFNA 501
+ D + E+ I + D
Sbjct: 134 YLDQKDAANARRCIAWIEAIAGPPPVPVPAPEAPSLSPLQSPQAFLEQAIEKSRQGDVRG 193
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D ++++ ++ Y + G+A S IG+Y+ A +A++L +
Sbjct: 194 AIADFDWLLQINSQDPQVYRHRGVARSKIGDYQGAISDLNQALKLSPQSAPTYYSRGVIR 253
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + L + ++ AY RG+ GL H+ A++D +
Sbjct: 254 CQQKDYRGAIADFDRALELQPGYAPAYVGRGVAHQGLEDHRAALQDYA 301
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EA+ +RG +AA + A+Q+ S+AL P+ ++RG+ +F + AAV+D +
Sbjct: 3 EAFYQRGIEKAAAEDFQAAVQEFSRALRVRPDYGAAYYQRGLAHFNLGEIAAAVDDYTQA 62
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ E + G A ++ + + A +A+ + A ++ L + +
Sbjct: 63 IAHGYEGAEPWLRRGFAYLTLDQPEAAIADAEQALSCQPSLAAAHSLCGTAHRRLDQTSQ 122
Query: 570 ALECLQQV--LYIDKR 583
A+ C +Q LY+D++
Sbjct: 123 AIACWKQAAQLYLDQK 138
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ ++RGI +DF AAV++ S +++ + +AY GLA ++GE A + + +A
Sbjct: 3 EAFYQRGIEKAAAEDFQAAVQEFSRALRVRPDYGAAYYQRGLAHFNLGEIAAAVDDYTQA 62
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I E W Y L E A+ +Q L + A+ L G L Q +
Sbjct: 63 IAHGYEGAEPWLRRGFAYLTLDQPEAAIADAEQALSCQPSLAAAHSLCGTAHRRLDQTSQ 122
Query: 604 AI 605
AI
Sbjct: 123 AI 124
>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 1346
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++G+Y A++ F+Q + DP P G+G Q++ + AI+ T+AI+ P
Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDAIAAHTKAIELEPD 820
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + R + +AI DL+KA+ P + RG AA+ D S
Sbjct: 821 SANDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQPEAALADYS 880
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---------DRNF----LEAW 554
+++DK N AY LG +Y++A KAI++ D+ + A
Sbjct: 881 QAIEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEVADFPQKLETDKKYKGLAYSAR 940
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
G L Y DL E+A+ Q + + + + Y R L L ++++AI D +
Sbjct: 941 GFL---YSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYT 992
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYAS-------AISIFDQILKEDPMYPEALIGRGT 423
T + +++I +D ++ IA N G S AI+ + + D Y A G G
Sbjct: 705 TLTALNQAIEIDPNMA--IAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISAYGGLGM 762
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
Q + A++ F + I +P + +G A + +AI +KA+E EP+SA
Sbjct: 763 LYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDAIAAHTKAIELEPDSA 822
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ R V + + A+ DL+ ++L + + G A ++ + + A + +A
Sbjct: 823 NDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQPEAALADYSQA 882
Query: 544 IQLDRNFLEAWGHLTQFYQ-------DLANSEKALEC--LQQVLYIDKRFSK-AYHLRGL 593
I++D+N A+ L YQ +A +KA+E Q L DK++ AY RG
Sbjct: 883 IEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEVADFPQKLETDKKYKGLAYSARGF 942
Query: 594 LLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNA 633
L LG+ ++AI D S + P + + L R R L + A
Sbjct: 943 LYSDLGKLEQAIADFSQAIE-LSPKVTY-LYRARALNYTA 980
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ D ++RG ++ + A++ F+Q + P A +GRG ++ + A++D
Sbjct: 1110 PFAADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALAD 1169
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F+ I+ NP G + R + AL +AI D + +E + N+A RGI++
Sbjct: 1170 FSTVIKLNPKLGFVYDFRSRTYQALNRIEDAIADADQWIERQANAASYTR-RGILHVLGA 1228
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ + A+ D + L+ + LGL G K+A +AI+LD + E L
Sbjct: 1229 NPSLALNDFQQAITLNPKAIIPTVNLGLIYYEQGNRKQAIAQFQRAIELDGSLAEPQLAL 1288
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++A+ Q L +D +F + L+
Sbjct: 1289 ATALYHGGQQKQAIALAQSALKLDPKFQEVAFLK 1322
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 21/240 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + GK AI+ F Q ++ P R + AI+D+T+AI+
Sbjct: 939 ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RRG+ LG+ EA D K L EP+ + R V K + A+ D
Sbjct: 999 PKDLSTYIRRGKIYRTLGQETEANADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALAD 1058
Query: 506 LSACVKLDKENKSAYTYLGLALSSI-GEYKKAEEAHL---KAIQLDRNFLEAWGHLTQFY 561
+ ++L +N + L + + + G ++ E+A+L KA+ L N F
Sbjct: 1059 YTKAIELAPQNPFQRSLLHSSRAQMHGNLQQYEQANLDYSKALALLPN------PTVPFA 1112
Query: 562 QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
DL + AL Q + I + AY RG L G +++ A+ D S+
Sbjct: 1113 ADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALADFST 1172
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAI 442
+ R IAQ ++ A ++ F Q L+ D Y A RG + +LE AI+DF++AI
Sbjct: 905 QYQRAIAQFDK---AIEVADFPQKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAI 961
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P ++ R AL EAI D ++A+E P RG + A
Sbjct: 962 ELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIRRGKIYRTLGQETEA 1021
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFL----- 551
D + + + Y S+ Y +A + KAI+L R+ L
Sbjct: 1022 NADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALADYTKAIELAPQNPFQRSLLHSSRA 1081
Query: 552 EAWGHLTQFYQDLANSEKALECL 574
+ G+L Q+ Q + KAL L
Sbjct: 1082 QMHGNLQQYEQANLDYSKALALL 1104
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ + A+ N G Y A ++L DP +A G Q + AI F AI+
Sbjct: 112 VDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKI 171
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P E + G AL +A++ K L+F+P +A + +GI+ K AV
Sbjct: 172 DPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVN 231
Query: 505 --DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
DL+ V+ D SA+ G L+ +G+Y++A E K I++D A+ +L Y+
Sbjct: 232 CFDLATSVRDDF--ASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYE 289
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++ ++A++ + + D+ + +AY RG LG+++ A++D +
Sbjct: 290 EIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKA 338
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W ++G L + EAI KAL PN + L ++ + A E
Sbjct: 71 PYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEES 130
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L + +D EN+ A+ LGL +Y +A +AI++D +++E + L Y+ L
Sbjct: 131 LRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALN 190
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGSR 613
N +KALE ++ L D + ++ +G++L G+ ++A+ DL++ R
Sbjct: 191 NFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVR 240
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 3/242 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D S G+ + KYA AI F++ +K DP Y E G + A+ + +
Sbjct: 143 DAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKF 202
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ +P W +G G+ EA+ A + A + +G +
Sbjct: 203 LDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQ 262
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E +++D +++A+ L IGE ++A + + KAI+ D + EA+ Y
Sbjct: 263 AIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCY 322
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMP--HL 619
L + AL + + I A+ + L + LG +++IK +R + P +
Sbjct: 323 DSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAAR-LQPDGYD 381
Query: 620 IW 621
IW
Sbjct: 382 IW 383
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K+ + D++L+ P E + +G + E AI F +A+ NP+ E +
Sbjct: 55 KFEDGLYFTDKLLEIFPYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDK 114
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A +G +A + L K L+ +P + D G++ + + A+ +K+D +
Sbjct: 115 SAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPD 174
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y LG ++ + KA EA+ K + D W + E+A+ C
Sbjct: 175 YVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFD 234
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ F+ A++ +G L LG++++AI+
Sbjct: 235 LATSVRDDFASAWYNKGNTLADLGKYQQAIE 265
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI K+ AI F++ L +P E L+ + A + A + +
Sbjct: 78 LKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDI 137
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ G + EAI +A++ +P+ ++ +E G +F+ A+E
Sbjct: 138 DPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALE 197
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ D N S + G+ L G+ ++A A + +F AW + DL
Sbjct: 198 AYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADL 257
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+EC +V+ ID A++ + +G+ ++A+K
Sbjct: 258 GKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVK 299
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 8/262 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI V GK A++ FD + A +G A + + AI F + I+ +
Sbjct: 215 NKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEID 274
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ +GE +A++ SKA+E + + RG + A+ D
Sbjct: 275 PYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRD 334
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + ++ A+ S+G +++ +++L+A +L + + W +L + Y +
Sbjct: 335 FNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPDGYDIWYNLAETYYEAN 394
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTR 625
ALE Q L I+ + S + + + + L + ++AI D + + P +
Sbjct: 395 KWLNALEAYDQCLRINPKDSNSMYSKAKINFILHRTQEAI-DCLRKAFEINPDI------ 447
Query: 626 WRNLCFNAWPFIRRRLLCTRLL 647
RN N +P I+ L RLL
Sbjct: 448 -RNEFENEYPDIKTSKLFKRLL 468
>gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639]
gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639]
Length = 399
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
+ +RG+A N Y+ AI FD+ ++ +P + + AL G+ A +L
Sbjct: 26 YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 85
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI +F EAI+ +P E ++G A LG EA+ + A++ P + + + + I
Sbjct: 86 ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 145
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ ++ ++L+ +N + Y L L S+G+ K+A + KAI L+
Sbjct: 146 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 205
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
E + ++L + L+ + + + YH R G+L + LG+++KA+ +L
Sbjct: 206 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 264
Query: 611 GSR 613
R
Sbjct: 265 SVR 267
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+A G+ A+ + +K +P PE + Q + AI++ A
Sbjct: 104 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 163
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + R+ ++G+ EA+ L KA+ P A+ H++G++ + K ++
Sbjct: 164 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 223
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D +KL N + G+ +G+Y+KA ++++L+ N E L
Sbjct: 224 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 283
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD----LSSGSRTMMP 617
+ E A+E + + +D + + Y+ +G L L ++ KAIK+ +S +P
Sbjct: 284 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 343
Query: 618 H 618
H
Sbjct: 344 H 344
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAIS 436
++ + I ++ KY AI+ D ++ +P + +AL+ + + L+ A+
Sbjct: 138 EYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGK-----LKEALD 192
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+AI NP E + ++G L + ++D A++ PN+ + +G++ ++
Sbjct: 193 QLDKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPEYHFRKGVLYYEL 252
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ AV +L V+L+ N + LGLAL + Y+ A E KA++LD + + +
Sbjct: 253 GKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYY 312
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ L +KA++ + + ++ ++ +G++L LG++++AI +L
Sbjct: 313 KGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEA 367
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+ GKY A+ ++ ++ +P PE G A E A+ +F +A
Sbjct: 240 EYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKA 299
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P + + +G A AL + +AI++ KA+ PN +++G+V +
Sbjct: 300 VKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEE 359
Query: 502 AVEDLSACVKLDKENKS 518
A+ +L +KL+ +N+
Sbjct: 360 AIVELDEAIKLNPDNQQ 376
>gi|434406332|ref|YP_007149217.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260587|gb|AFZ26537.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 496
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAW 452
+G Y AI+ +++++ P Y +A RG A R QR EA I+ + +AI P +AW
Sbjct: 290 QGNYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEA-IASYEKAIAIKPDLHQAW 348
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A + L +AI KAL +P+ + + RG + K ++ A+ + +
Sbjct: 349 NNRGFALSELKRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSDAIASWEKGLAI 408
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ A+ GLALS + Y +A ++ KA+ + + +AW + +L E+AL+
Sbjct: 409 KPDDHEAWYNRGLALSELKRYSEAIASYEKALAIKPDLYQAWNNRGIALFNLKRYEEALK 468
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ + I+ A + R +L LG+
Sbjct: 469 SFDKAISINPDDQLAINNRQAVLKQLGR 496
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 30/253 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP----------------------MYP-------- 415
+RG A N +Y+ AI+ FD+ + +P +Y
Sbjct: 218 NRGSALANLQRYSDAIASFDKAISINPDDQIAINNRETLLKLLGRMPINVYAGSETVQKA 277
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E +G A Q + AI+ + + I P +AW RG A L EAI KA
Sbjct: 278 EDFFNQGNDYAVQGNYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKA 337
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P+ + RG + K ++ A+ + + + A+ G AL + Y
Sbjct: 338 IAIKPDLHQAWNNRGFALSELKRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSD 397
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + K + + + EAW + +L +A+ ++ L I +A++ RG+ L
Sbjct: 398 AIASWEKGLAIKPDDHEAWYNRGLALSELKRYSEAIASYEKALAIKPDLYQAWNNRGIAL 457
Query: 596 HGLGQHKKAIKDL 608
L ++++A+K
Sbjct: 458 FNLKRYEEALKSF 470
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
++N + + K+ +I D+ + RG A N +Y A++ FD+ L P +A
Sbjct: 124 QQNYQQAIASYEKAIAIKSDYADAWNNRGSALGNLQRYKDALASFDKALAIKPDDADAWN 183
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG+A + + A++ F +A+ P EAW RG A A L +AI KA+
Sbjct: 184 NRGSALGNLQRYKDALASFDKALAIKPDYAEAWNNRGSALANLQRYSDAIASFDKAISIN 243
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ ++ R + V S V+ ++ + G + G Y++A +
Sbjct: 244 PDDQIAINNRETLLKLLGRMPINVYAGSETVQKAED----FFNQGNDYAVQGNYQQAIAS 299
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ K I + ++ +AW + + L +A+ ++ + I +A++ RG L L
Sbjct: 300 YEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPDLHQAWNNRGFALSELK 359
Query: 600 QHKKAIKDLSSGSRTMMP--HLIWN 622
++ AI + + P H WN
Sbjct: 360 RYSDAIASYEK-ALAIKPDYHEAWN 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y+ AI+ +++ L P Y EA RG A + AI+ + + +
Sbjct: 350 NRGFALSELKRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSDAIASWEKGLAIK 409
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + L EAI KAL +P+ + RGI F K + A++
Sbjct: 410 PDDHEAWYNRGLALSELKRYSEAIASYEKALAIKPDLYQAWNNRGIALFNLKRYEEALKS 469
Query: 506 LSACVKLDKENKSAYTYLGLALSSIG 531
+ ++ +++ A L +G
Sbjct: 470 FDKAISINPDDQLAINNRQAVLKQLG 495
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + K +I D+ +RG A +Y+ AI+ +++ + P +A R
Sbjct: 292 NYQQAIASYEKVIAIKPDYYQAWYNRGNALRQLQRYSEAIASYEKAIAIKPDLHQAWNNR 351
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + + AI+ + +A+ P EAW RG A L +AI K L +P+
Sbjct: 352 GFALSELKRYSDAIASYEKALAIKPDYHEAWNNRGNALVELKRYSDAIASWEKGLAIKPD 411
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG+ + K ++ A+ + + + A+ G+AL ++ Y++A ++
Sbjct: 412 DHEAWYNRGLALSELKRYSEAIASYEKALAIKPDLYQAWNNRGIALFNLKRYEEALKSFD 471
Query: 542 KAIQLD 547
KAI ++
Sbjct: 472 KAISIN 477
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L+ +S+AI + +A ++ Q NR F S+L+ + I +KAL + P +
Sbjct: 321 LRQLQRYSEAIASYEKAIAIKPDLHQAWNNRGFALSELKRYSDAIASYEKALAIKPDYHE 380
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
A+ +G A L R +A++ WEKG
Sbjct: 381 AWNNRGNALVELKRYSDAIASWEKG 405
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L+ +S AI + LA + + + NR S+L+ + I +KAL + P L Q
Sbjct: 389 LVELKRYSDAIASWEKGLAIKPDDHEAWYNRGLALSELKRYSEAIASYEKALAIKPDLYQ 448
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
A+ +G A L R EEAL ++K
Sbjct: 449 AWNNRGIALFNLKRYEEALKSFDKA 473
>gi|434406331|ref|YP_007149216.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260586|gb|AFZ26536.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 373
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 392 VNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+NEG Y AI+ +++ L P Y +A GRG A + AI+ + +A+
Sbjct: 115 LNEGNDYSDKQDYQQAIASYEKALAIKPDYADAWYGRGYALDELKRYSEAIASYEKALAI 174
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG A L EAI KAL EP+ + RG + K ++ A+
Sbjct: 175 KPDYADAWINRGNALGKLKRYSEAIASYEKALAIEPDYYQAWYNRGFALDELKRYSEAIA 234
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + A+ G+AL ++ Y +A ++ KA+ ++ + AW + +L
Sbjct: 235 SYDKALAIEPDYHQAWNNRGIALVALKRYSEAIASYDKALAIEPDLHPAWNNRGNALGEL 294
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + L I+ +AY+ + G +AI++L+
Sbjct: 295 KRYSEAIASYDKALAIEPDLDEAYYNKACSYALQGNADQAIENLN 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
K++ + + K+ +I D+ RG A +Y+ AI+ +++ L P Y +A I
Sbjct: 124 KQDYQQAIASYEKALAIKPDYADAWYGRGYALDELKRYSEAIASYEKALAIKPDYADAWI 183
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A + AI+ + +A+ P +AW RG A L EAI KAL E
Sbjct: 184 NRGNALGKLKRYSEAIASYEKALAIEPDYYQAWYNRGFALDELKRYSEAIASYDKALAIE 243
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + RGI K ++ A+ + ++ + A+ G AL + Y +A +
Sbjct: 244 PDYHQAWNNRGIALVALKRYSEAIASYDKALAIEPDLHPAWNNRGNALGELKRYSEAIAS 303
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ KA+ ++ + EA+ + Y N+++A+E L + +
Sbjct: 304 YDKALAIEPDLDEAYYNKACSYALQGNADQAIENLNKAI 342
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + G + +++ + AI+ + +A+ P +AW RG A L EAI KA
Sbjct: 112 EKFLNEGNDYSDKQDYQQAIASYEKALAIKPDYADAWYGRGYALDELKRYSEAIASYEKA 171
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +P+ AD RG K K ++ A+ + ++ + A+ G AL + Y +
Sbjct: 172 LAIKPDYADAWINRGNALGKLKRYSEAIASYEKALAIEPDYYQAWYNRGFALDELKRYSE 231
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ KA+ ++ ++ +AW + L +A+ + L I+ A++ RG L
Sbjct: 232 AIASYDKALAIEPDYHQAWNNRGIALVALKRYSEAIASYDKALAIEPDLHPAWNNRGNAL 291
Query: 596 HGLGQHKKAI 605
L ++ +AI
Sbjct: 292 GELKRYSEAI 301
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ +I D+ ++RG A +Y+ AI+ +++ L +P Y +A RG A
Sbjct: 164 AIASYEKALAIKPDYADAWINRGNALGKLKRYSEAIASYEKALAIEPDYYQAWYNRGFAL 223
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+ + +A+ P +AW RG A AL EAI KAL EP+
Sbjct: 224 DELKRYSEAIASYDKALAIEPDYHQAWNNRGIALVALKRYSEAIASYDKALAIEPDLHPA 283
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + K ++ A+ + ++ + AY + + G +A E KAIQ
Sbjct: 284 WNNRGNALGELKRYSEAIASYDKALAIEPDLDEAYYNKACSYALQGNADQAIENLNKAIQ 343
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L + YQ LA ++ ++ DKRF +
Sbjct: 344 L----------VPNKYQKLAKTDPDFAKIRS----DKRFQQ 370
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 23 IDELVRVDSVMAS---AITARIELA--------KLCSLRNWSKAIRILDSLLA-QSYEIQ 70
+DEL R +AS A+ + + A L L+ +S+AI + LA + Q
Sbjct: 155 LDELKRYSEAIASYEKALAIKPDYADAWINRGNALGKLKRYSEAIASYEKALAIEPDYYQ 214
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
NR F +L+ + I DKAL ++P QA+ +G A AL R EA++ ++K
Sbjct: 215 AWYNRGFALDELKRYSEAIASYDKALAIEPDYHQAWNNRGIALVALKRYSEAIASYDKAL 274
Query: 131 --EHALHQS--------ADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLN 180
E LH + +LK++ E A D+++ E D+ + + S + L
Sbjct: 275 AIEPDLHPAWNNRGNALGELKRYSE-----AIASYDKALAIEPDLDEAYYNKACSYA-LQ 328
Query: 181 ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE 227
N + EN NK+ I ++ + +++T DPD RSD+
Sbjct: 329 GN--ADQAIENLNKA-IQLVPNKYQKLAKT------DPDFAKIRSDK 366
>gi|428207878|ref|YP_007092231.1| hypothetical protein Chro_2894 [Chroococcidiopsis thermalis PCC
7203]
gi|428009799|gb|AFY88362.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 219
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
+ KS SV+ +G+ Q GKY +AI+ F Q++ P A RG ARA + + + A
Sbjct: 36 QPKSRSVEDLFKQGVYQTLVGKYRAAIADFSQVILLQPNNATAYANRGLARAAKGDRQDA 95
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ DF A+ NP + A+ RG + L + AI D +A+ +P H R +V +
Sbjct: 96 LKDFDRALSLNPDSAIAYYNRGFTLSKLEDYHGAIADFDRAIRIDPEDPSAYHCRCLVRY 155
Query: 495 KFKDFNAAVEDLS--ACVKLDKENKSAYTYLGLALSSIGE--YKKAEEAHLKAI 544
K D EDL A + L AYT L L S+ E + K E + +A+
Sbjct: 156 KLGDMVGVAEDLRTVAQIYLQHGKLDAYTNLLAELKSLHELSHPKRERSSARAV 209
Score = 44.7 bits (104), Expect = 0.19, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
S + L ++G+ + AA+ D S + L N +AY GLA ++ G+ + A +
Sbjct: 41 SVEDLFKQGVYQTLVGKYRAAIADFSQVILLQPNNATAYANRGLARAAKGDRQDALKDFD 100
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A+ L+ + A+ + L + A+ + + ID AYH R L+ + LG
Sbjct: 101 RALSLNPDSAIAYYNRGFTLSKLEDYHGAIADFDRAIRIDPEDPSAYHCRCLVRYKLGDM 160
Query: 602 KKAIKDLSSGSRTMMPH 618
+DL + ++ + H
Sbjct: 161 VGVAEDLRTVAQIYLQH 177
Score = 42.0 bits (97), Expect = 1.4, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G + +G+ AI D S+ + +PN+A RG+ D A++D + L+
Sbjct: 47 KQGVYQTLVGKYRAAIADFSQVILLQPNNATAYANRGLARAAKGDRQDALKDFDRALSLN 106
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++ AY G LS + +Y A +AI++D
Sbjct: 107 PDSAIAYYNRGFTLSKLEDYHGAIADFDRAIRID 140
>gi|124004663|ref|ZP_01689507.1| tetratricopeptide repeat family protein [Microscilla marina ATCC
23134]
gi|123989786|gb|EAY29315.1| tetratricopeptide repeat family protein [Microscilla marina ATCC
23134]
Length = 428
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+G +V E + +AI ++ Q +K+D Y A R A ++L AI D+++AI+
Sbjct: 16 VSKGDEKVEEQRVKAAIRLYSQAIKKDKTYAMAYAKRAKAYQANKKLSLAIKDYSKAIKL 75
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N A++ R +R + +AI D ++A+ + R + + D+ +A
Sbjct: 76 NNKLAGAYRGRAYSRFLREDYKDAIHDYNEAIRLHEKDTFSFYRRAVSKYHISDYRSAFM 135
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D++ +KL+K Y GL ++ + K + + +AI+L + EA+ H + L
Sbjct: 136 DINKALKLNKFRPEFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAKKQL 195
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
N + AL + + ++ + +AY RG G+ KA+ D S
Sbjct: 196 -NYDGALTDYNKAIRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKA 241
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 35/270 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ +V +++S +D+ ++ P Y EA RG A+ Q + A++D+ +A
Sbjct: 149 EFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAKK-QLNYDGALTDYNKA 207
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--------- 492
I+ NP EA+ RG A G+ +A+ D SKA++ ER
Sbjct: 208 IRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKAIKIYNKEEAYFAERAKAHEQNKDLKA 267
Query: 493 --------------NFKF-----------KDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
N KF KDF+ A++D+ + +N AY G
Sbjct: 268 ALKDLDRAIELDGRNLKFYFSRARLKGLLKDFDGAMQDIQFIIDEQPKNVEAYIQRGTIK 327
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+YK A E A+++ E + H N ALE + + +D +KA
Sbjct: 328 EIKLDYKGALEDFSTAMKMAPKNPEIYNHRGVIKYKSRNFTGALEDFDKAISLDPLNNKA 387
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGSRTMMP 617
Y+ +G+ +G+ ++A K+L P
Sbjct: 388 YYNKGMTQMYMGKKEEACKNLRKAGEYGHP 417
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ + RG + + Y A+ F +K P PE RG + R A+ DF
Sbjct: 316 NVEAYIQRGTIKEIKLDYKGALEDFSTAMKMAPKNPEIYNHRGVIKYKSRNFTGALEDFD 375
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+AI +P +A+ +G + +G+ EA ++L KA E+
Sbjct: 376 KAISLDPLNNKAYYNKGMTQMYMGKKEEACKNLRKAGEY 414
>gi|227823431|ref|YP_002827404.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
gi|227342433|gb|ACP26651.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
Length = 295
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G++ A++ FDQ +K +P + +A RG + +AA+SD+ A+Q N
Sbjct: 85 RGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGLVHRNMGDQQAALSDYNAALQLNS 144
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A+ RG + A D +KA++ + H RG++ D A+ED
Sbjct: 145 SYDVAYIGRGNLYRQANQLDNAFNDFNKAIQLDTTDPRAYHNRGLIYQARNDHAHAIEDF 204
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y G++ + G+ A AI L+ E+W + Y+
Sbjct: 205 STAISLSPSSAEPYNGRGISYVAQGDDDNAFSDFNTAINLNGKLAESWANQALIYERRGE 264
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + L +D ++ A
Sbjct: 265 KAKAQKSYSHALQLDPKYEPA 285
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G +A+S ++ L+ + Y A IGRG +L+ A +DF +AIQ +
Sbjct: 118 NRGLVHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNKAIQLD 177
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG A + AI+D S A+ P+SA+ + RGI D + A D
Sbjct: 178 TTDPRAYHNRGLIYQARNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQGDDDNAFSD 237
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ + L+ + ++ L GE KA++++ A+QLD + A L +
Sbjct: 238 FNTAINLNGKLAESWANQALIYERRGEKAKAQKSYSHALQLDPKYEPARAGLAR 291
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E I+ + I SNPS EA+ RG A GE A+ D +A++ P+ RG+
Sbjct: 62 EENIASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGL 121
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+ D AA+ D +A ++L+ AY G + A KAIQLD
Sbjct: 122 VHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNKAIQLDTTDP 181
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + YQ + A+E + + ++ Y+ RG+ G A D ++
Sbjct: 182 RAYHNRGLIYQARNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQGDDDNAFSDFNT 240
>gi|425440012|ref|ZP_18820323.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719634|emb|CCH96553.1| exported hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 434
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF + + + ++ + AI F Q ++ P Y +A +GR A +LE I++ +A
Sbjct: 182 DF-FVQAMDKYDKADFDGAIVDFSQAIQLKPDYAQAYMGRAMAYKGLGDLENQITELRKA 240
Query: 442 IQSNPSAGEAWKRRG--QARAALGESVEAIQDLSKALEFEPNS----ADILHERGIVNFK 495
E +++G +A + ++ QDL ++ PNS A++ GI +K
Sbjct: 241 -------AELLQKQGDTEAYQTTIDLIKVTQDLIDSIRSNPNSKLAFAELFFNYGIEEWK 293
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+F ++ + ++L+ + AY G A +GEY+KA + +AI+L+ N A+
Sbjct: 294 KGNFVQSLAQFNLAIRLNPNDAIAYILRGDAYFELGEYQKAIADYTQAIRLNPNDARAYL 353
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
Y L +K + Q + +D ++ AY+LRGL+ G +KAI DL +
Sbjct: 354 FRGNAYGQLKEYQKVIADYTQAIRLDPNYADAYNLRGLVYEMSGNRQKAITDLEKAA 410
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ S ++DF +G+ ++ +G +AI+ F++ ++ +P Y +A RG A + ++ + A+
Sbjct: 38 AASTALDF-FHQGVKRLQQGDLEAAINSFNEAIRLNPNYAQAYGNRGIAYSRLQQYDKAL 96
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D+ + I+ NP++ A+ R LG+S +AI D ++A+ PN + R I K
Sbjct: 97 ADYNQFIRFNPNSAVAYYNRATLYDKLGDSQKAIADYAQAIRLNPNFTQAISGREIAQNK 156
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-----EAHLKAIQLDRNF 550
+ ++ +A + ++A + + ++ +Y KA+ +AIQL ++
Sbjct: 157 LRTPQQSISTTNALAQYFSNGRNAKDFF---VQAMDKYDKADFDGAIVDFSQAIQLKPDY 213
Query: 551 LEAWGHLTQFYQDLANSE-------KALECLQQ 576
+A+ Y+ L + E KA E LQ+
Sbjct: 214 AQAYMGRAMAYKGLGDLENQITELRKAAELLQK 246
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 178/444 (40%), Gaps = 86/444 (19%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AIR L+ AQ+Y NR YS+L+ + + D ++ ++ +P AY
Sbjct: 60 AAINSFNEAIR-LNPNYAQAY-----GNRGIAYSRLQQYDKALADYNQFIRFNPNSAVAY 113
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
+ + LG ++A++ Y A+ + + Q + E+ Q++ T + +S
Sbjct: 114 YNRATLYDKLGDSQKAIA----DYAQAIRLNPNFTQAISGREI----AQNKLRTPQQSIS 165
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD 226
+ + +G NA D + + ++K+D + + + PD
Sbjct: 166 TTNALAQYFSNGRNAKDFFVQAMDKYDKADFDGA------IVDFSQAIQLKPDYA----- 214
Query: 227 EAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNG 286
+A G ++ + G D R A+E+ Q D +
Sbjct: 215 QAYMGRAMA------------------YKGLGDLENQITELRKAAEL-LQKQGDTEAYQT 255
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS 346
ID V T D+ D + S+ N +E + I + K + +S +
Sbjct: 256 TIDLIKV----------TQDLIDSIRSNP---NSKLAFAELFFNYGIEEWKKGNFVQSLA 302
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ 406
+ + R++ + +I+ + RG A G+Y AI+ + Q
Sbjct: 303 QFN-------------------LAIRLNPNDAIAY---ILRGDAYFELGEYQKAIADYTQ 340
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
++ +P A + RG A +E + I+D+T+AI+ +P+ +A+ RG G
Sbjct: 341 AIRLNPNDARAYLFRGNAYGQLKEYQKVIADYTQAIRLDPNYADAYNLRGLVYEMSGNRQ 400
Query: 467 EAIQDLSKALEFEPNSADILHERG 490
+AI DL KA A++ +RG
Sbjct: 401 KAITDLEKA-------ANLYQQRG 417
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK + + GI + +G + +++ F+ ++ +P A I RG A E + AI
Sbjct: 276 SKLAFAELFFNYGIEEWKKGNFVQSLAQFNLAIRLNPNDAIAYILRGDAYFELGEYQKAI 335
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D+T+AI+ NP+ A+ RG A L E + I D ++A+ +PN AD + RG+V
Sbjct: 336 ADYTQAIRLNPNDARAYLFRGNAYGQLKEYQKVIADYTQAIRLDPNYADAYNLRGLVYEM 395
Query: 496 FKDFNAAVEDLSACVKLDKE 515
+ A+ DL L ++
Sbjct: 396 SGNRQKAITDLEKAANLYQQ 415
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
IAQVN ++A+ F Q G R Q +LEAAI+ F EAI+ NP+
Sbjct: 32 AIAQVNAA--STALDFFHQ---------------GVKRLQQGDLEAAINSFNEAIRLNPN 74
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A + L + +A+ D ++ + F PNSA + R + K D A+ D +
Sbjct: 75 YAQAYGNRGIAYSRLQQYDKALADYNQFIRFNPNSAVAYYNRATLYDKLGDSQKAIADYA 134
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ--DLA 565
++L+ A + +A + + +++ Q N A Q D A
Sbjct: 135 QAIRLNPNFTQAISGREIAQNKLRTPQQSISTTNALAQYFSNGRNAKDFFVQAMDKYDKA 194
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
+ + A+ Q + + +++AY R + GLG + I +L + +
Sbjct: 195 DFDGAIVDFSQAIQLKPDYAQAYMGRAMAYKGLGDLENQITELRKAAELL 244
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AIR L+ A++Y R Y QL+ ++ VI D +A++LDP AY
Sbjct: 334 AIADYTQAIR-LNPNDARAYLF-----RGNAYGQLKEYQKVIADYTQAIRLDPNYADAYN 387
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQ 155
L+G + G +++A++ EK + Q D Q ++ +LL +Q
Sbjct: 388 LRGLVYEMSGNRQKAITDLEKA-ANLYQQRGDTAQAQKVLDLLKELQQ 434
>gi|418056728|ref|ZP_12694780.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353209345|gb|EHB74750.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 575
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A++ GK AI F + ++ P L GRG A + AAI DF+ A+ ++
Sbjct: 140 NRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A++ R +AR +G+ EAI+DLS+A+ F+ N+ ++ RG + +A++D
Sbjct: 200 ARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGNTASALKD 259
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFLEAWGHLTQFYQDL 564
S ++LD ++ +A+ GLA +S+ E A L +AI+LD A+ Y+
Sbjct: 260 FSHAIELDGKSSAAFEGRGLA-NSLAEAPDDAYADLNRAIELDPRSPVAYAFRAVVYKQN 318
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++ + +D +A RG + G AI DL
Sbjct: 319 NQPDIGARDVETAIKLDPNSPEALWARGEIAEASGHADTAIADL 362
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A G+ A+ +++ ++ P YP A RG +L+ A+ DF A+ P
Sbjct: 73 RAVASARLGQTKLALEDYNRAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A LG+ AI+D +K++E P SA L RG+ +AA+ D
Sbjct: 133 GYAAAYSNRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDF 192
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V D SAY A +IG+ +A E +A+ D N E + Y N
Sbjct: 193 SRAVSADARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGN 252
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGL 593
+ AL+ + +D + S A+ RGL
Sbjct: 253 TASALKDFSHAIELDGKSSAAFEGRGL 279
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 4/227 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQRELEAAISDFTEAI 442
+G A++ G A+A++ + + L++ + + L R A A + + A+ D+ A+
Sbjct: 35 QGAAEMVRGDVATAVAAYTEALRDTGLANDRRATILNDRAVASARLGQTKLALEDYNRAV 94
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P A+ RG A+G+ EA++D +AL P A R + + A
Sbjct: 95 ELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEMRLGKPDVA 154
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++L + + GLA + + A +A+ D F A+ + +
Sbjct: 155 IRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFASAYRNRAEARM 214
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++A+E L + + D ++ Y +RG G A+KD S
Sbjct: 215 TIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGNTASALKDFS 261
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G ASA+ F ++ D A GRG A + + A +D AI+ +P
Sbjct: 243 RGYAYLLNGNTASALKDFSHAIELDGKSSAAFEGRGLANSLAEAPDDAYADLNRAIELDP 302
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ R + +D+ A++ +PNS + L RG + + A+ DL
Sbjct: 303 RSPVAYAFRAVVYKQNNQPDIGARDVETAIKLDPNSPEALWARGEIAEASGHADTAIADL 362
Query: 507 SACVKLDKENKSAYTYLGLALSSIG 531
++L K ++ + AL +G
Sbjct: 363 RHVLQL----KPSWQFAADALKRLG 383
>gi|21229432|ref|NP_635354.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|452211843|ref|YP_007491957.1| TPR repeat-containing protein [Methanosarcina mazei Tuc01]
gi|20908028|gb|AAM33026.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|452101745|gb|AGF98685.1| TPR repeat-containing protein [Methanosarcina mazei Tuc01]
Length = 350
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 5/230 (2%)
Query: 377 KSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
KS +++R + + + G+Y A++ D+I P PE + + + E
Sbjct: 123 KSYGINYRYALKFKAFSLCKLGRYREALNALDEISAIYPEDPEIESHKNMLQTLENE--R 180
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
I P W+RRG++ LG+ EA+++ + LE P ADIL +G
Sbjct: 181 LIRRTGNTQDQPPKHPGIWERRGKSSYKLGKYEEAVKEFDRCLESNPKDADILRNKGSAL 240
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+E + ++L+ + A+ G L IG ++A A KA+Q + N EA
Sbjct: 241 YMLGRYEEAIEAFNKSLELNPRDADAWNLKGSTLYMIGRPEEALRALDKALQRNPNIFEA 300
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
W + +L ++AL ++ L I+ A L+ +L GL Q +K
Sbjct: 301 WFNKGSILFELGKYKQALSAVENALRINAEDINALTLKTSILSGLKQDEK 350
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P I RG ++K + AV++ C++ + ++ G AL +G Y++A EA
Sbjct: 193 PKHPGIWERRGKSSYKLGKYEEAVKEFDRCLESNPKDADILRNKGSALYMLGRYEEAIEA 252
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
K+++L+ +AW + E+AL L + L + +A+ +G +L LG
Sbjct: 253 FNKSLELNPRDADAWNLKGSTLYMIGRPEEALRALDKALQRNPNIFEAWFNKGSILFELG 312
Query: 600 QHKKAIKDLSSGSR 613
++K+A+ + + R
Sbjct: 313 KYKQALSAVENALR 326
>gi|383318583|ref|YP_005379424.1| hypothetical protein Mtc_0133 [Methanocella conradii HZ254]
gi|379319953|gb|AFC98905.1| TPR repeat-containing protein [Methanocella conradii HZ254]
Length = 367
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A++ G+ A A+S ++ L+ PM G ++ L+ A+ F +A+ +
Sbjct: 131 ARALARI--GESAEALSCMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAID 188
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G+A A GE EA++ +++ A+ + +G++ K K + A+
Sbjct: 189 PENAAAWLGKGEALALAGEDEEALKCFDRSIALNCGIANAWYGKGMILIKKKCYEDAMRM 248
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L V++ + A+ Y G L ++G+ K+A +++ + + + AW +
Sbjct: 249 LDKVVEIQPGHADAWFYRGCILEAMGKIKEALDSYTRVTEAEPKSHAAWFMRGVLLGRME 308
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ E A++C + + I+ +F+ A++ +GL LG ++A + +S
Sbjct: 309 DYEGAIQCFDKAIDINPKFAAAWYHKGLFSSILGDSEEAARCIS 352
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + ++ + + G Q + G A+ F + L DP A +G+G A A
Sbjct: 146 CMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAIDPENAAAWLGKGEALALA 205
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E E A+ F +I N AW +G +A++ L K +E +P AD
Sbjct: 206 GEDEEALKCFDRSIALNCGIANAWYGKGMILIKKKCYEDAMRMLDKVVEIQPGHADAWFY 265
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + A++ + + + ++ +A+ G+ L + +Y+ A + KAI ++
Sbjct: 266 RGCILEAMGKIKEALDSYTRVTEAEPKSHAAWFMRGVLLGRMEDYEGAIQCFDKAIDINP 325
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
F AW H F L +SE+A C+ + + ID F
Sbjct: 326 KFAAAWYHKGLFSSILGDSEEAARCISRTIEIDPGF 361
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G+ N G+ +I+ FD+ ++ DP EA +G + + A F AI+
Sbjct: 26 LKNGLEMANMGRMIDSIASFDEAIRLDPACAEAYNCKGLVLLQLKRYDKAFECFEHAIKL 85
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + W + LG + Q +L+++P SA + H + + A+
Sbjct: 86 EPENPKFWYNKSMLFRELGMFEDEAQACLMSLKYDPGSAHVWHSCARALARIGESAEALS 145
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + + ++Y+G SS+G A ++ KA+ +D AW +
Sbjct: 146 CMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAIDPENAAAWLGKGEALALA 205
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
E+AL+C + + ++ + A++ +G++L
Sbjct: 206 GEDEEALKCFDRSIALNCGIANAWYGKGMIL 236
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 66/156 (42%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ G A +G +++I +A+ +P A+ + +G+V + K ++ A E +KL+
Sbjct: 27 KNGLEMANMGRMIDSIASFDEAIRLDPACAEAYNCKGLVLLQLKRYDKAFECFEHAIKLE 86
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
EN + + +G ++ +A L +++ D W + + S +AL C
Sbjct: 87 PENPKFWYNKSMLFRELGMFEDEAQACLMSLKYDPGSAHVWHSCARALARIGESAEALSC 146
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+++ L + + G LG A+K
Sbjct: 147 MEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFG 182
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAA--------ISDFTEAIQSNPSAGEAW 452
+SI +I + P E + G+ A A + LE A I+ F EAI+ +P+ EA+
Sbjct: 1 MSILFRIGESVPCDAEDMRGK-AAEALKNGLEMANMGRMIDSIASFDEAIRLDPACAEAY 59
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC--- 509
+G L +A + A++ EP + + + ++ F++ ++ AC
Sbjct: 60 NCKGLVLLQLKRYDKAFECFEHAIKLEPENPKFWYNKSML---FRELGMFEDEAQACLMS 116
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKA---EEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K D + + AL+ IGE +A E L+A +D N W ++ + L
Sbjct: 117 LKYDPGSAHVWHSCARALARIGESAEALSCMEKALEATPMDANL---WSYMGFYQSSLGM 173
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ A++ + L ID + A+ +G L G+ ++A+K
Sbjct: 174 LDDAVKSFGKALAIDPENAAAWLGKGEALALAGEDEEALK 213
>gi|150401356|ref|YP_001325122.1| hypothetical protein Maeo_0930 [Methanococcus aeolicus Nankai-3]
gi|150014059|gb|ABR56510.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
Length = 329
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
I G QR AI AI NP AWK +G A + AI+ KAL
Sbjct: 6 IKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNL 65
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P ++ +G++ K + A+ L ++L N + Y G+ L +Y++A
Sbjct: 66 NPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAIT 125
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
KA++++ W H + L E+AL C + ++ R + + +G++L L
Sbjct: 126 YFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGVVLENL 185
Query: 599 GQHKKAIK 606
G++++A++
Sbjct: 186 GRYEEALE 193
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 104/218 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + +Y AI D + +P A +G A ++ AI F +A+ NP
Sbjct: 9 GITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPK 68
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G + + EAI L K+LE PN+A + +G++ K++ + A+ +
Sbjct: 69 NSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFN 128
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ ++ + + G+ S + +Y++A KA +++ + + ++L
Sbjct: 129 KALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGVVLENLGRY 188
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
E+ALEC +L + + S +L+ +L + +++ A+
Sbjct: 189 EEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDAL 226
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA KY +AI FD+ L +P A + +G + E AI+ ++++ P
Sbjct: 42 KGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G + EAI +KALE P A + G++ K + + A+
Sbjct: 102 NNARVWIYKGVILRKWEKYEEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCF 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT---QFYQD 563
+ +++ K + G+ L ++G Y++A E + I L+RN + G L + +
Sbjct: 162 NKATEVNPRVKQIFDEKGVVLENLGRYEEALECY--NILLNRNPKNS-GILNLKIRVLRK 218
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ E AL C +VL I+ Y ++ +L L +++ A+
Sbjct: 219 MKRYEDALNCCDEVLNINPENKNTYFIKLQILRNLERYEDAL 260
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 2/223 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G+ KY AI+ D+ L+ P I +G + E AI+ F +A++
Sbjct: 74 MHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFNKALEI 133
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP WK G + L + EA+ +KA E P I E+G+V + A+E
Sbjct: 134 NPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGVVLENLGRYEEALE 193
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + + +N L + Y+ A + + ++ + Q ++L
Sbjct: 194 CYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENKNTYFIKLQILRNL 253
Query: 565 ANSEKALECLQQVLYIDKRFSKA--YHLRGLLLHGLGQHKKAI 605
E AL C +VL I K ++++G + + LG++ KAI
Sbjct: 254 ERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAI 296
>gi|114705557|ref|ZP_01438460.1| O-linked GlcNAc transferase [Fulvimarina pelagi HTCC2506]
gi|114538403|gb|EAU41524.1| O-linked GlcNAc transferase [Fulvimarina pelagi HTCC2506]
Length = 293
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS Q + +P PEA RGTA + EAAI DFT AI +P+ +A+ R
Sbjct: 64 ISSLTQTVNANPQDPEAYNVRGTAYGRSGQNEAAIQDFTTAISLDPNFHQAYANRALIYR 123
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVEDLSACVKLDKENKSA 519
GE ++A++D ++AL+ PN RG + ++ N A+ D + L+ + A
Sbjct: 124 QTGERLKAVEDYNRALQINPNYTSAYIGRGNI-YRLAGRNREALVDFQRAIDLNTTDPRA 182
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL G++ +A E KAI L E + Y L + E A Q L
Sbjct: 183 YHNRGLLYQIDGQHSQAIEDFSKAISLQSTAAEPYSGRGVSYLALNDIENAAADFQAALK 242
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
+D+ ++ + + +LL G +KA + S ++
Sbjct: 243 LDQTKAEYWVNQAVLLERQGDRQKAFRSYSRAAQ 276
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ +++ L+ +P Y A IGRG A+ DF AI N + A+
Sbjct: 126 GERLKAVEDYNRALQINPNYTSAYIGRGNIYRLAGRNREALVDFQRAIDLNTTDPRAYHN 185
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG G+ +AI+D SKA+ + +A+ RG+ D A D A +KLD+
Sbjct: 186 RGLLYQIDGQHSQAIEDFSKAISLQSTAAEPYSGRGVSYLALNDIENAAADFQAALKLDQ 245
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + L G+ +KA ++ +A QLD N+ A
Sbjct: 246 TKAEYWVNQAVLLERQGDRQKAFRSYSRAAQLDANYTPA 284
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ IS T+ + +NP EA+ RG A G++ AIQD + A+ +PN H+
Sbjct: 60 LDQNISSLTQTVNANPQDPEAYNVRGTAYGRSGQNEAAIQDFTTAISLDPN----FHQ-- 113
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
AY L GE KA E + +A+Q++ N+
Sbjct: 114 ----------------------------AYANRALIYRQTGERLKAVEDYNRALQINPNY 145
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ Y+ + +AL Q+ + ++ +AYH RGLL GQH +AI+D S
Sbjct: 146 TSAYIGRGNIYRLAGRNREALVDFQRAIDLNTTDPRAYHNRGLLYQIDGQHSQAIEDFS 204
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+ +AI F + DP + +A R E A+ D+ A+Q NP
Sbjct: 84 RGTAYGRSGQNEAAIQDFTTAISLDPNFHQAYANRALIYRQTGERLKAVEDYNRALQINP 143
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG G + EA+ D +A++ H RG++ + A+ED
Sbjct: 144 NYTSAYIGRGNIYRLAGRNREALVDFQRAIDLNTTDPRAYHNRGLLYQIDGQHSQAIEDF 203
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L Y+ G++ ++ + + A A++LD+ E W + + +
Sbjct: 204 SKAISLQSTAAEPYSGRGVSYLALNDIENAAADFQAALKLDQTKAEYWVNQAVLLERQGD 263
Query: 567 SEKALECLQQVLYIDKRFSKA 587
+KA + +D ++ A
Sbjct: 264 RQKAFRSYSRAAQLDANYTPA 284
>gi|218662751|ref|ZP_03518681.1| O-linked GlcNAc transferase protein [Rhizobium etli IE4771]
Length = 309
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + N G+ AI+ ++ L+ +P Y A IGRG + +AA +DF++AIQ
Sbjct: 129 NRALVYRNMGQQQQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLG 188
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ G A+ RG + +AI D SKA+ PNSA+ + RGI F D + A D
Sbjct: 189 TTDGRAYHNRGLIYQKRNQQDKAIDDFSKAISLAPNSAEPYNGRGISYFALNDDDNAFAD 248
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++L+ ++ L G+ KA ++ A+ LD + A
Sbjct: 249 FNHAIELNGNIAESWANQALVYERRGDKAKAARSYRHAVGLDPKYQPA 296
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G++ A++ F+ L+ +P + +A R + + AI+D+ A+Q NP
Sbjct: 96 RGSAYGRGGQFRQALNDFNTALQINPRFFQAYANRALVYRNMGQQQQAIADYNAALQINP 155
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A+ RG G+ A D SKA++ H RG++ K + A++D
Sbjct: 156 SYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLGTTDGRAYHNRGLIYQKRNQQDKAIDDF 215
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y G++ ++ + A AI+L+ N E+W + Y+ +
Sbjct: 216 SKAISLAPNSAEPYNGRGISYFALNDDDNAFADFNHAIELNGNIAESWANQALVYERRGD 275
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 276 KAKAARSYRHAVGLDPKYQPA 296
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P PE RG+A + A++DF A+Q NP +A+ R
Sbjct: 76 IASLTAVINANPRDPEGYNVRGSAYGRGGQFRQALNDFNTALQINPRFFQAYANRALVYR 135
Query: 461 ALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ +AI D + AL+ P S D+ + RG V +AA D S ++L + A
Sbjct: 136 NMGQQQQAIADYNAALQINP-SYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLGTTDGRA 194
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL + KA + KAI L N E + Y L + + A +
Sbjct: 195 YHNRGLIYQKRNQQDKAIDDFSKAISLAPNSAEPYNGRGISYFALNDDDNAFADFNHAIE 254
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ ++++ + L+ G KA +
Sbjct: 255 LNGNIAESWANQALVYERRGDKAKAAR 281
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E I+ T I +NP E + RG A G+ +A+ D + AL+ P R +
Sbjct: 73 EENIASLTAVINANPRDPEGYNVRGSAYGRGGQFRQALNDFNTALQINPRFFQAYANRAL 132
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V A+ D +A ++++ AY G G+ A KAIQL
Sbjct: 133 VYRNMGQQQQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLGTTDG 192
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + YQ +KA++ + + + ++ Y+ RG+ L A D +
Sbjct: 193 RAYHNRGLIYQKRNQQDKAIDDFSKAISLAPNSAEPYNGRGISYFALNDDDNAFADFN 250
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I L+ + P + + RG + F A+ D + ++++ AY
Sbjct: 72 SEENIASLTAVINANPRDPEGYNVRGSAYGRGGQFRQALNDFNTALQINPRFFQAYANRA 131
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L ++G+ ++A + A+Q++ ++ A+ Y+ + A + + +
Sbjct: 132 LVYRNMGQQQQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLGTTD 191
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLS 609
+AYH RGL+ Q KAI D S
Sbjct: 192 GRAYHNRGLIYQKRNQQDKAIDDFS 216
>gi|187779400|ref|ZP_02995873.1| hypothetical protein CLOSPO_02996 [Clostridium sporogenes ATCC
15579]
gi|187773025|gb|EDU36827.1| tetratricopeptide repeat protein [Clostridium sporogenes ATCC
15579]
Length = 268
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + L E ++I+D SK LE +P D
Sbjct: 51 YSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + KD++ A++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D EA+ + Y +L +++ L + Y RG + + + ++ AI
Sbjct: 171 DSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKLKPENKNIYLNRGTMYYKMKSYENAIS 230
Query: 607 D 607
D
Sbjct: 231 D 231
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 74/145 (51%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E I+ + +++ +P+ D R + + +++N ++ED S ++LD ++K Y +
Sbjct: 57 EKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCYNNRAIV 116
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
I +Y KA + K + +D+++ + + + ++ + ++A + ++ D R S+
Sbjct: 117 YYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHEDSRDSE 176
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSG 611
AY R + L ++ +IKD ++
Sbjct: 177 AYENRAFAYYNLKKYSPSIKDYTNA 201
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 395 GKYAS----AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
G Y+S I + +K P + +A R E +I D+++ ++ +P +
Sbjct: 49 GYYSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKD 108
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+ R + + +A+QDL K + + + +I RG+V + +D+ A + + +
Sbjct: 109 CYNNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAI 168
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + AY A ++ +Y + + + A++L
Sbjct: 169 HEDSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKL 204
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
S++ K KF I K K +D +R +Y +I + +IL+ DP +
Sbjct: 52 SSDIKEKIKFYTISI-KLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
R ++ + A+ D + + + + RG + + A + +KA+
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ ++ R + K ++ +++D + +KL ENK+ Y G + Y+ A
Sbjct: 171 DSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKLKPENKNIYLNRGTMYYKMKSYENAIS 230
Query: 539 AHLKAIQ 545
++KA+
Sbjct: 231 DYMKALN 237
>gi|440703720|ref|ZP_20884640.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
gi|440274727|gb|ELP63235.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
Length = 747
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 1/241 (0%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ RG G Y A+ ++Q L DP A GRG RA QR+ AAI+D A +
Sbjct: 192 RMLRGRELRLSGAYERALGEYEQALALDPELERAYYGRGVTRAEQRDYAAAITDLDRADE 251
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P RG LG EA++DL +A+ P+ A RG+ D A+
Sbjct: 252 LAPDTARVLFVRGDYHRILGHHEEAVRDLDRAVALGPDLAGAWASRGVTRHGTGDIEQAL 311
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
DL ++LD E+ A S E+ + +A+ L +
Sbjct: 312 ADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALGPELAWVSCQRGDALRV 371
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNL 623
+AL + L +D ++ AY RG+ LG+H+ + DL + + P W L
Sbjct: 372 AGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLADLDR-ALALHPAYPWAL 430
Query: 624 T 624
Sbjct: 431 V 431
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 21/250 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + G A++ D+ L+ DP + AL+ R + E + +D A+
Sbjct: 296 SRGVTRHGTGDIEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALG 355
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +RG A G EA+ D +ALE +P A RG+ + + D
Sbjct: 356 PELAWVSCQRGDALRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLAD 415
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L + L A + EY+ + E +A++L+ AW L
Sbjct: 416 LDRALALHPAYPWALVQRSVVHRKTDEYEASYEDADRAVELEPE--SAWA--------LW 465
Query: 566 NSEKALECLQQV----LYIDKRFS------KAYHLRGLLLHGLGQHKKAIKDLSSGSRTM 615
N +AL CL + + +D+ S A RG +LH L + +A+ DL T+
Sbjct: 466 NRGEALRCLGRFEEARVDLDRALSLFPGSVWAVGCRGAVLHELRLYGEALDDLDRAV-TL 524
Query: 616 MPHLIWNLTR 625
P W+L R
Sbjct: 525 DPDGAWHLMR 534
>gi|374385114|ref|ZP_09642624.1| hypothetical protein HMPREF9449_01010 [Odoribacter laneus YIT
12061]
gi|373226644|gb|EHP48967.1| hypothetical protein HMPREF9449_01010 [Odoribacter laneus YIT
12061]
Length = 233
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ + + KY AI +F + ++ D + A R A ++ A+ DF + + P
Sbjct: 26 QGMDYILQEKYEQAIPLFSKAIQTDKDWLPAYYNRAICYANTKQYPEALKDFNYILANCP 85
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG LG AI+D S+A++ +P+ H RGI F KD++ A+ D
Sbjct: 86 AQAEAYFNRGIVYENLGLYSNAIKDYSRAIQCQPDLITAYHYRGIARFYMKDYDGALSDY 145
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ + L Y G+ L YK A + +AIQ+D
Sbjct: 146 NQAMNLGLSETGLYFNRGVILQIKKNYKAAIRDYSQAIQID 186
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI N G Y++AI + + ++ P A RG AR + ++ + A+SD+ +A+
Sbjct: 92 FNRGIVYENLGLYSNAIKDYSRAIQCQPDLITAYHYRGIARFYMKDYDGALSDYNQAMNL 151
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
S + RG AI+D S+A++ +P++ + + R I A++
Sbjct: 152 GLSETGLYFNRGVILQIKKNYKAAIRDYSQAIQIDPSNPKLFYNRAIAKMSLNQMEEALK 211
Query: 505 DLSACVKLDKE 515
DL +L E
Sbjct: 212 DLEIAARLGYE 222
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 50 RNWSKAIRILDSLLAQ-SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
+ + +A++ + +LA + + NR Y L L+ + I+D +A+Q P L+ AY
Sbjct: 68 KQYPEALKDFNYILANCPAQAEAYFNRGIVYENLGLYSNAIKDYSRAIQCQPDLITAYHY 127
Query: 109 KGCAFSALGRKEEALSVWEKGYEHALHQSA---DLKQFLELEELLTAAKQDRSVTCEYDV 165
+G A + + ALS + + L ++ + L++++ AA +D S + D
Sbjct: 128 RGIARFYMKDYDGALSDYNQAMNLGLSETGLYFNRGVILQIKKNYKAAIRDYSQAIQIDP 187
Query: 166 SN 167
SN
Sbjct: 188 SN 189
>gi|352096290|ref|ZP_08957170.1| Tetratricopeptide TPR_2 repeat-containing protein [Synechococcus
sp. WH 8016]
gi|351676984|gb|EHA60135.1| Tetratricopeptide TPR_2 repeat-containing protein [Synechococcus
sp. WH 8016]
Length = 342
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F SR ++ +Y A+ +D ++ P PE I RG + + AI D++ AI
Sbjct: 98 FFSSRASSKTKLRQYEEALKDYDYAIELKPDCPEQFICRGRIKEILCDTYDAIEDYSIAI 157
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + S +A+ RG+A E +A DL+KA+E N I RG + + + A
Sbjct: 158 KLDFSCMQAYAMRGKAYKECFEFDDAESDLNKAIELGSNDIAIRKMRGYLRERKGNLKGA 217
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + KE Y LG A ++G+Y A + KAI LD + + A L Y
Sbjct: 218 IEDYTITANA-KETFDNYQSLGDAQFALGDYASAIKYFEKAILLDADNISAHFSLGNTYM 276
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L N AL C L F+ + RG+ + L Q A D
Sbjct: 277 RLKNYSDALVCYTNALENSPSFASGFLNRGIANYALNQLVDACSD 321
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + + E AI F++AI N + R ++ L + EA++D A+E +P+
Sbjct: 69 GKANSLLEKHEQAIECFSKAILINAKDPTFFSSRASSKTKLRQYEEALKDYDYAIELKPD 128
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ RG + D A+ED S +KLD AY G A E+ AE
Sbjct: 129 CPEQFICRGRIKEILCDTYDAIEDYSIAIKLDFSCMQAYAMRGKAYKECFEFDDAESDLN 188
Query: 542 KAIQLDRN 549
KAI+L N
Sbjct: 189 KAIELGSN 196
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G AQ G YASAI F++ + D A G + A+ +T A++++
Sbjct: 236 SLGDAQFALGDYASAIKYFEKAILLDADNISAHFSLGNTYMRLKNYSDALVCYTNALENS 295
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
PS + RG A AL + V+A D KA E A L ++
Sbjct: 296 PSFASGFLNRGIANYALNQLVDACSDWMKAKELGSEDAQDLLDK 339
>gi|427416785|ref|ZP_18906968.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759498|gb|EKV00351.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 957
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y A++ F+++++ + P A + +G + ++ E AI F +AI NP
Sbjct: 736 RGLVLRELRRYDDALTTFERVIELNDTDPRAWLNKGMVLSRLKQREKAIISFDKAIALNP 795
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW RG A L + EA + KA++ + N RG+ + F AV
Sbjct: 796 TYHEAWVNRGVAYGILQQPEEAFKSFDKAVKIQENDGVAWLNRGLALLDLERFEDAVPSF 855
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + A+ GLAL +G + A ++ KA++L+ + + + + Y
Sbjct: 856 EQATRFKPDLVKAWDNRGLALVKLGRDRDALKSFEKALELNPAYAKTYYNRAVCYALQRE 915
Query: 567 SEKALECLQQVLYIDKRFSK 586
++K+LE LQ+ + ID R+ +
Sbjct: 916 TDKSLENLQKAVQIDPRYKE 935
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI+ + A+ P+ E W R + L EA+ L K ++ +P + ++RG
Sbjct: 678 LEDAIATYDRALAIQPNNAELWLARSKPLTQLKRRDEALTALQKVIDLDPQRKEAWYQRG 737
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V + + ++ A+ ++L+ + A+ G+ LS + + +KA + KAI L+ +
Sbjct: 738 LVLRELRRYDDALTTFERVIELNDTDPRAWLNKGMVLSRLKQREKAIISFDKAIALNPTY 797
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW + Y L E+A + + + I + A+ RGL L L + + A+
Sbjct: 798 HEAWVNRGVAYGILQQPEEAFKSFDKAVKIQENDGVAWLNRGLALLDLERFEDAVPSFEQ 857
Query: 611 GSRTMMPHLI 620
+R P L+
Sbjct: 858 ATR-FKPDLV 866
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D ++ Q+ G AI+ +D+ L P E + R + + A++
Sbjct: 661 TIDELVAEAEGQIEAGNLEDAIATYDRALAIQPNNAELWLARSKPLTQLKRRDEALTALQ 720
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I +P EAW +RG L +A+ + +E +G+V + K
Sbjct: 721 KVIDLDPQRKEAWYQRGLVLRELRRYDDALTTFERVIELNDTDPRAWLNKGMVLSRLKQR 780
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + L+ A+ G+A + + ++A ++ KA+++ N AW +
Sbjct: 781 EKAIISFDKAIALNPTYHEAWVNRGVAYGILQQPEEAFKSFDKAVKIQENDGVAWLNRGL 840
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
DL E A+ +Q KA+ RGL L LG+ + A+K
Sbjct: 841 ALLDLERFEDAVPSFEQATRFKPDLVKAWDNRGLALVKLGRDRDALK 887
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ +++ DP EA RG R + A++ F I+ N + AW +G
Sbjct: 715 ALTALQKVIDLDPQRKEAWYQRGLVLRELRRYDDALTTFERVIELNDTDPRAWLNKGMVL 774
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ L + +AI KA+ P + RG+ + A + VK+ + + A
Sbjct: 775 SRLKQREKAIISFDKAIALNPTYHEAWVNRGVAYGILQQPEEAFKSFDKAVKIQENDGVA 834
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ GLAL + ++ A + +A + + ++AW + L AL+ ++ L
Sbjct: 835 WLNRGLALLDLERFEDAVPSFEQATRFKPDLVKAWDNRGLALVKLGRDRDALKSFEKALE 894
Query: 580 IDKRFSKAYHLRGL 593
++ ++K Y+ R +
Sbjct: 895 LNPAYAKTYYNRAV 908
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+ + AI FD+ + +P Y EA + RG A ++ E A F +A++
Sbjct: 768 LNKGMVLSRLKQREKAIISFDKAIALNPTYHEAWVNRGVAYGILQQPEEAFKSFDKAVKI 827
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ G AW RG A L +A+ +A F+P+ RG+ K A++
Sbjct: 828 QENDGVAWLNRGLALLDLERFEDAVPSFEQATRFKPDLVKAWDNRGLALVKLGRDRDALK 887
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++L+ Y + + E K+ E KA+Q+D + E
Sbjct: 888 SFEKALELNPAYAKTYYNRAVCYALQRETDKSLENLQKAVQIDPRYKE 935
>gi|405378662|ref|ZP_11032577.1| tetratricopeptide repeat protein [Rhizobium sp. CF142]
gi|397324762|gb|EJJ29112.1| tetratricopeptide repeat protein [Rhizobium sp. CF142]
Length = 288
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G++ A+ F+ L+ +P + +A R + AI+D+ A+Q NP
Sbjct: 76 RGSAYGRGGEFRKALDDFNTALQINPRFFQAYANRALVYRNMGQQPQAIADYNAALQINP 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A+ RG G+ +A D S+A++ H RG++ K + A++D
Sbjct: 136 SYDVAYIGRGNVYRMAGQDDQAFNDFSRAIQLGTTDGRAYHNRGLIYQKRNQQDKAIDDF 195
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y G++ ++ + A AI+L+ N E+W + Y+
Sbjct: 196 SKAISLSPNSPEPYNGRGISYIALNDNDNAFADFNHAIELNGNLAESWANQALVYERRGE 255
Query: 567 SEKALECLQQVLYIDKRFSKA 587
+KA+ + + +D ++ A
Sbjct: 256 KDKAIRSYRHAVGLDPKYQPA 276
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + N G+ AI+ ++ L+ +P Y A IGRG + + A +DF+ AIQ
Sbjct: 109 NRALVYRNMGQQPQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDQAFNDFSRAIQLG 168
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ G A+ RG + +AI D SKA+ PNS + + RGI D + A D
Sbjct: 169 TTDGRAYHNRGLIYQKRNQQDKAIDDFSKAISLSPNSPEPYNGRGISYIALNDNDNAFAD 228
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++L+ ++ L GE KA ++ A+ LD + A
Sbjct: 229 FNHAIELNGNLAESWANQALVYERRGEKDKAIRSYRHAVGLDPKYQPA 276
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P PE RG+A E A+ DF A+Q NP +A+ R
Sbjct: 56 IASLTAVINANPRDPEGYNVRGSAYGRGGEFRKALDDFNTALQINPRFFQAYANRALVYR 115
Query: 461 ALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ +AI D + AL+ P S D+ + RG V + A D S ++L + A
Sbjct: 116 NMGQQPQAIADYNAALQINP-SYDVAYIGRGNVYRMAGQDDQAFNDFSRAIQLGTTDGRA 174
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL + KA + KAI L N E + Y L +++ A +
Sbjct: 175 YHNRGLIYQKRNQQDKAIDDFSKAISLSPNSPEPYNGRGISYIALNDNDNAFADFNHAIE 234
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ ++++ + L+ G+ KAI+
Sbjct: 235 LNGNLAESWANQALVYERRGEKDKAIR 261
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ T I +NP E + RG A GE +A+ D + AL+ P R +V
Sbjct: 56 IASLTAVINANPRDPEGYNVRGSAYGRGGEFRKALDDFNTALQINPRFFQAYANRALVYR 115
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ D +A ++++ AY G G+ +A +AIQL A+
Sbjct: 116 NMGQQPQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDQAFNDFSRAIQLGTTDGRAY 175
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ YQ +KA++ + + + + Y+ RG+ L + A D +
Sbjct: 176 HNRGLIYQKRNQQDKAIDDFSKAISLSPNSPEPYNGRGISYIALNDNDNAFADFN 230
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I L+ + P + + RG + +F A++D + ++++ AY
Sbjct: 52 SQENIASLTAVINANPRDPEGYNVRGSAYGRGGEFRKALDDFNTALQINPRFFQAYANRA 111
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L ++G+ +A + A+Q++ ++ A+ Y+ ++A + + +
Sbjct: 112 LVYRNMGQQPQAIADYNAALQINPSYDVAYIGRGNVYRMAGQDDQAFNDFSRAIQLGTTD 171
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLS 609
+AYH RGL+ Q KAI D S
Sbjct: 172 GRAYHNRGLIYQKRNQQDKAIDDFS 196
>gi|78188282|ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78170481|gb|ABB27577.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 1827
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
K N + ++++ +I DF +RG+ N ++ AI F++ +++ P Y A
Sbjct: 1322 KENYSQSLELLNQAIAIKSDFASAYFNRGLVLKNLSQFEKAIEDFNKAIEQKPEYASAYH 1381
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RGT + ++ +AA+ + +AI P EA+ RG A L EAI +KA+ +
Sbjct: 1382 SRGTVQKELKQFDAALKSYEKAIALKPDYTEAYCNRGNALQLLKRFNEAIDSYNKAIALK 1441
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P A+ RG+V + K+ + ++++ + ++L + AY+ G+ + A
Sbjct: 1442 PQYAEAYSNRGVVFRELKELDTSLDNFNKAIELKADYAEAYSNRGVVFRELKMLDNALAD 1501
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
KAI+L +++ A+ + + L N + +C +
Sbjct: 1502 FNKAIELKKDYAIAYWNKSLVLLLLGNFAEGWQCYE 1537
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE-L 431
I S++ + L +G+ GK A + +IL+ P + +AL G +FQ+E
Sbjct: 1267 IHTSQNNHIATLLQQGVQLHKSGKQNEAELCYQKILQLQPNHADALHLLGVL-SFQKENY 1325
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
++ +AI A+ RG L + +AI+D +KA+E +P A H RG
Sbjct: 1326 SQSLELLNQAIAIKSDFASAYFNRGLVLKNLSQFEKAIEDFNKAIEQKPEYASAYHSRGT 1385
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + K F+AA++ + L + AY G AL + + +A +++ KAI L +
Sbjct: 1386 VQKELKQFDAALKSYEKAIALKPDYTEAYCNRGNALQLLKRFNEAIDSYNKAIALKPQYA 1445
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + +++L + +L+ + + + +++AY RG++ L A+ D +
Sbjct: 1446 EAYSNRGVVFRELKELDTSLDNFNKAIELKADYAEAYSNRGVVFRELKMLDNALADFNKA 1505
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ GK+ A + + QILK+ P + +AL G ++E A+ +AI
Sbjct: 286 LKQGVTLHQSGKHNEAEACYQQILKQQPHHIDALHLLGVLFYHKKEYSKALDLLNQAIAL 345
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ EA+ RG L EA+ +KALE + N A + R + ++K F+ A+E
Sbjct: 346 KPTFTEAYSNRGAVLKELKRFDEALASYNKALELKENYAAAWYNRANLLKEWKQFSEAIE 405
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ AY+ G+ L + ++ A ++ +AI L ++EA+ + ++L
Sbjct: 406 SYNKAIEFQPNYPEAYSNRGVVLKELKQFDAAFASYNQAIALKPTYVEAYSNKGTVLKEL 465
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ A+E + + + +++ + L+L
Sbjct: 466 KQLDAAIESFNKAIALKPDYAEVQWNKSLVL 496
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K + +D G+ ++ +Y+ A+ + +Q + P + EA RG
Sbjct: 304 CYQQILKQQPHHIDALHLLGVLFYHKKEYSKALDLLNQAIALKPTFTEAYSNRGAVLKEL 363
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A++ + +A++ + AW R + EAI+ +KA+EF+PN +
Sbjct: 364 KRFDEALASYNKALELKENYAAAWYNRANLLKEWKQFSEAIESYNKAIEFQPNYPEAYSN 423
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+V + K F+AA + + L AY+ G L + + A E+ KAI L
Sbjct: 424 RGVVLKELKQFDAAFASYNQAIALKPTYVEAYSNKGTVLKELKQLDAAIESFNKAIALKP 483
Query: 549 NFLEA 553
++ E
Sbjct: 484 DYAEV 488
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 362 AKRNK-KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+N+ + C +I + + D G+ + Y+ ++ + +Q + + A
Sbjct: 1289 GKQNEAELCYQKILQLQPNHADALHLLGVLSFQKENYSQSLELLNQAIAIKSDFASAYFN 1348
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + E AI DF +AI+ P A+ RG + L + A++ KA+ +P
Sbjct: 1349 RGLVLKNLSQFEKAIEDFNKAIEQKPEYASAYHSRGTVQKELKQFDAALKSYEKAIALKP 1408
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG K FN A++ + + L + AY+ G+ + E + +
Sbjct: 1409 DYTEAYCNRGNALQLLKRFNEAIDSYNKAIALKPQYAEAYSNRGVVFRELKELDTSLDNF 1468
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
KAI+L ++ EA+ + +++L + AL + + + K ++ AY + L+L LG
Sbjct: 1469 NKAIELKADYAEAYSNRGVVFRELKMLDNALADFNKAIELKKDYAIAYWNKSLVLLLLG 1527
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EA ++ +PN D LH G+V F+ + +N A+ L+ + L+ + SAY
Sbjct: 825 GKQNEAAICYKNIIQLQPNHVDALHLLGVVAFQKEQYNEALNLLNQAIALNTDFASAYFN 884
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GL ++ + KA E +A++L N+ EA+ ++L AL L +
Sbjct: 885 RGLVFKNLYHFDKALEDFDRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNALALKA 944
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPHLIWNLTRWRNLCFNAWPFIRRRL 641
++ Y + ++L LG + + G W++ WR C + P ++R
Sbjct: 945 DYAGVYLDKAIILLLLG-------NFADG---------WDIYEWRWKCKDL-PLVQRNF 986
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E + E +Q+ P ++G G+ EA + L+ +P+ D LH
Sbjct: 267 EWEVESGMWEEVVQAIPDL----LKQGVTLHQSGKHNEAEACYQQILKQQPHHIDALHLL 322
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G++ + K+++ A++ L+ + L AY+ G L + + +A ++ KA++L N
Sbjct: 323 GVLFYHKKEYSKALDLLNQAIALKPTFTEAYSNRGAVLKELKRFDEALASYNKALELKEN 382
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ AW + ++ +A+E + + + +AY RG++L L Q A
Sbjct: 383 YAAAWYNRANLLKEWKQFSEAIESYNKAIEFQPNYPEAYSNRGVVLKELKQFDAAF 438
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKET---SNEAKRNKK-FCVTRISKSKSISVDFRLSRGI 389
+DNK + S ++ + +LKE K+N+ C I + + VD G+
Sbjct: 797 TDNKVAVSHKATKAIQ---ALLKEAIKLHQSGKQNEAAICYKNIIQLQPNHVDALHLLGV 853
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
+ +Y A+++ +Q + + + A RG + A+ DF A++ P+
Sbjct: 854 VAFQKEQYNEALNLLNQAIALNTDFASAYFNRGLVFKNLYHFDKALEDFDRALRLKPNYA 913
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EA+ +RG LG A+ + AL + + A + ++ I+ +F
Sbjct: 914 EAYHKRGNILKELGLITAALSSYNNALALKADYAGVYLDKAIILLLLGNF 963
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE-L 431
+S + ++ L I GK A + I++ P + +AL G AFQ+E
Sbjct: 803 VSHKATKAIQALLKEAIKLHQSGKQNEAAICYKNIIQLQPNHVDALHLLGVV-AFQKEQY 861
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A++ +AI N A+ RG L +A++D +AL +PN A+ H+RG
Sbjct: 862 NEALNLLNQAIALNTDFASAYFNRGLVFKNLYHFDKALEDFDRALRLKPNYAEAYHKRGN 921
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ + AA+ + + L + Y + L +G +
Sbjct: 922 ILKELGLITAALSSYNNALALKADYAGVYLDKAIILLLLGNF 963
>gi|390438980|ref|ZP_10227405.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
gi|389837610|emb|CCI31529.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
Length = 706
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ + Q LK +P Y EA G+ T A QR EA ++ + +AIQ NP SA +AW
Sbjct: 346 RYTDALNYYGQALKINPDYLEAWQGKADTLLALQRYSEA-LNTYEKAIQINPDSAWQAWL 404
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A LG++ EA++ + L ++ + + + + ++AA + L +
Sbjct: 405 GRGEALDKLGKNQEALESFERVLSLNAAASQAWQGKADIYLELQQYSAAQKALEKLLTFQ 464
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W + L ALE
Sbjct: 465 QNDAKIWYKKGWSLQNLEDYEGAVKAYDQALVIEPDNSLIWYQKGNSFYQLNRINDALES 524
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGS 612
+ + +FS+A++ +G++L LG+ +A++ + +
Sbjct: 525 YSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQAT 563
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + N +A +AW+
Sbjct: 380 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNAAASQAWQG 439
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 440 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALVIEP 499
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G + + A E++ KA Q + F +A H +Q Q L +AL+
Sbjct: 500 DNSLIWYQKGNSFYQLNRINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALQ 557
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSR 613
Q + + +A+ +G LLH + + ++AI R
Sbjct: 558 AFTQATEANSNYYQAWLNQGALLHQMERFQEAIVSYEKARR 598
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAWKR 454
Y A+ +DQ L +P +LI +F + + A+ +++A Q NP +A
Sbjct: 484 YEGAVKAYDQALVIEP--DNSLIWYQKGNSFYQLNRINDALESYSKAGQFNPQFSQAHYS 541
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG EA+Q ++A E N +G + + + F A+ ++
Sbjct: 542 QGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIVSYEKARRISS 601
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + +G A +G+Y +A A+ +AIQ ++ E W L L E+A++
Sbjct: 602 QKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAY 661
Query: 575 QQVL 578
Q+ L
Sbjct: 662 QESL 665
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 100/221 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L + +A G+ ++ AA + +
Sbjct: 404 LGRGEALDKLGKNQEALESFERVLSLNAAASQAWQGKADIYLELQQYSAAQKALEKLLTF 463
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL EP+++ I +++G ++ N A+E
Sbjct: 464 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALVIEPDNSLIWYQKGNSFYQLNRINDALE 523
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + A+ G+ L +G +A +A +A + + N+ +AW + +
Sbjct: 524 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQM 583
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++A+ ++ I + ++ + G + LG + +AI
Sbjct: 584 ERFQEAIVSYEKARRISSQKAEVFIGIGNAWYRLGDYSQAI 624
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 555 ALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIVSYEKARRISSQKAEVFIGIGNAW 614
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 615 YRLGDYSQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 670
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ +++ + F T+ +++
Sbjct: 515 LNRINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALQAF--TQATEAN 566
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI +++ + E IG G A + AI+
Sbjct: 567 SNYYQAWLNQGALLHQMERFQEAIVSYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINA 626
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 627 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 686
Query: 498 DFNAAVEDLSACVKLDKE 515
+ ++++ + K+D E
Sbjct: 687 ELQQSLQNQTP--KVDSE 702
>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
6242]
Length = 1049
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 29/249 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS- 444
++ AQ G Y AI+ +D ILK P P +G A + + E AI + +A+ S
Sbjct: 68 NKAAAQYLYGDYDEAIATYDHILKLQPGSPLIFTKKGMVLAKKGDYENAIKTYDKALMSI 127
Query: 445 ---------------NPSAGEAW-------------KRRGQARAALGESVEAIQDLSKAL 476
N S A+ + ++ LG + EAIQ K L
Sbjct: 128 SKYILGNTLNDTSELNGSTSTAYIIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFL 187
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + + L+E+G+ + + A+E +++D +N++ + G A S+G Y++A
Sbjct: 188 EIQLEHSMTLYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEA 247
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E++ KAI+ D ++ W + Y L E A+ ++VL +D ++A+ G+ L
Sbjct: 248 IESYNKAIEFDSTDVKVWWNKALDYDKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALE 307
Query: 597 GLGQHKKAI 605
G G + +AI
Sbjct: 308 GTGNYFEAI 316
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 33/252 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQRE 430
G+A G Y AI+ F+Q+L DP + EAL+ +A +
Sbjct: 303 GVALEGTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPD 362
Query: 431 LEAAI------------SDFTEAIQSNPS----AGEAWKRRGQARAALGESVEAIQDLSK 474
A I S F+E + PS + + W +G L + EA+ K
Sbjct: 363 NIAKIYTSNPAIASLNTSQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEK 422
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
LE + A + +++ + K ++N A+ + ++ D + + G L + G YK
Sbjct: 423 VLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYK 482
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A + K ++LD F AW L + +A+ QV+ + FS AY+ +G
Sbjct: 483 EAVSCYRKTVELDPQFTLAWYALGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRT 542
Query: 595 LHGLGQHKKAIK 606
L LG ++ AI+
Sbjct: 543 LDKLGLYQDAIE 554
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A + +G + + E A+ + +AI P++ W RGQ LG+ AI + KA
Sbjct: 634 DAWVAKGGSLFVKGSYENALLSYNKAIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKA 693
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ + + D +K ++ A++ + LD ENK+A G A IG Y+
Sbjct: 694 VDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRS 753
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ ++ K +++D + EAW +L N E A+ +VL D + + L+L
Sbjct: 754 SLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVL 813
Query: 596 HGLGQHKKAIKD 607
LG + +I +
Sbjct: 814 EDLGLFEDSINN 825
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI ++++ L+ + L +G A + E AI + EA+Q +P W
Sbjct: 174 GRNEEAIQLYEKFLEIQLEHSMTLYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYS 233
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+GQA +LG EAI+ +KA+EF+ + + + K A+ + LD
Sbjct: 234 KGQAFDSLGLYEEAIESYNKAIEFDSTDVKVWWNKALDYDKLDKKEDAIISYREVLVLDL 293
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
N A+ LG+AL G Y +A + + + LD + ++AW
Sbjct: 294 YNAEAWFNLGVALEGTGNYFEAINSFEQVLLLDPDNIDAW 333
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 89/218 (40%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G A+ +D++L DP + L+ + E +I+++ + ++
Sbjct: 775 RGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKV 834
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++G LG +A L EP ++ L +G + D+ A++
Sbjct: 835 DDPSVLMKKGNVYEKLGLYKDANDCYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQY 894
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + +A+ G Y + + +LKA++L + AW +L +
Sbjct: 895 DLVIAKNPYDAAAWYNKGNVAYLTSSYAGSTQFYLKAVELQPKSITAWYNLGYIANIRGD 954
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ A+ ++ L ID + A + + + +GQ A
Sbjct: 955 VDTAITYYEKALAIDPNAASALYNKRFAHYRVGQSVSA 992
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I S S +G + Y A+ F+++L+ D + + A
Sbjct: 385 CYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKL 444
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AI +TEA++ +PS W +G G EA+ K +E +P +
Sbjct: 445 GNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYA 504
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G+ + + A+ ++ + + AY G L +G Y+ A E++ AI LD
Sbjct: 505 LGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYRVAISLD 563
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 31/233 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+A + G Y AI +D L DP Y AL + A+ + + AI+ + ++ P
Sbjct: 35 EGVALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHILKLQP 94
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + ++G A G+ AI+ KAL I + + L
Sbjct: 95 GSPLIFTKKGMVLAKKGDYENAIKTYDKAL------------MSISKYILGN------TL 136
Query: 507 SACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHL----KAIQLDRNFLEA-WGHLTQ 559
+ +L+ +AY LG+ S I +K L +AIQL FLE H
Sbjct: 137 NDTSELNGSTSTAYIIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFLEIQLEHSMT 196
Query: 560 FYQ---DLA---NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
Y+ D A SE+A+E + L ID ++ +G LG +++AI+
Sbjct: 197 LYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAIE 249
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI + + L+ DP P +G + A+S + + ++ +P AW
Sbjct: 445 GNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYA 504
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A + E EAI + +E + +D + +G K + A+E + LD
Sbjct: 505 LGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYRVAISLDS 564
Query: 515 ENKSA 519
N +A
Sbjct: 565 SNSAA 569
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+GT + E A+ F + ++ + W ++ A LG EAI ++AL +P
Sbjct: 403 KGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALRRDP 462
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ ++ + +G + AV V+LD + A+ LGL L+ + E+ +A A+
Sbjct: 463 SCPNVWYLKGYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYALGLDLAHMDEHSEAIAAY 522
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ I+ + +F +A+ + L + A+E + + +D S A
Sbjct: 523 DQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYRVAISLDSSNSAA 569
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 94/223 (42%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +++G + +G Y +A+ +++ + P RG + +AI+++ +A
Sbjct: 634 DAWVAKGGSLFVKGSYENALLSYNKAIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKA 693
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ + S +AW Q AIQ L +P + L ++G K + +
Sbjct: 694 VDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRS 753
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++ + +K+D +N A+ GLA ++G + A ++ K + D ++ +
Sbjct: 754 SLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVL 813
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+DL E ++ +VL + +G + LG +K A
Sbjct: 814 EDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDA 856
>gi|428778794|ref|YP_007170580.1| hypothetical protein Dacsa_0435 [Dactylococcopsis salina PCC 8305]
gi|428693073|gb|AFZ49223.1| tetratricopeptide repeat protein [Dactylococcopsis salina PCC 8305]
Length = 215
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 77/152 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+GI +G+Y +A+S Q + E+ +A RG + +LE AI+D T I+
Sbjct: 33 FDQGIEAYQKGEYETAVSALSQAITEEIEPEKAYYFRGISYLELGKLEKAIADQTNVIEL 92
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S A+ R A LG EAI D S+A+E +P I RGI + F +A+E
Sbjct: 93 NASNAGAYYDRALAETELGNYQEAITDYSQAIELKPKQERIYLNRGIAYAQQGKFESAIE 152
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D + ++L++ AY G+ +++GE + A
Sbjct: 153 DYNRAIELNENLADAYANRGVTRAAMGEKESA 184
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 49/89 (55%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A+ G Y AI+ + Q ++ P + RG A A Q + E+AI D+ AI+ N
Sbjct: 103 RALAETELGNYQEAITDYSQAIELKPKQERIYLNRGIAYAQQGKFESAIEDYNRAIELNE 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ +A+ RG RAA+GE AI DL KA
Sbjct: 163 NLADAYANRGVTRAAMGEKESAIADLEKA 191
Score = 62.4 bits (150), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 426 AFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A+Q+ E E A+S ++AI +A+ RG + LG+ +AI D + +E ++A
Sbjct: 39 AYQKGEYETAVSALSQAITEEIEPEKAYYFRGISYLELGKLEKAIADQTNVIELNASNAG 98
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++R + + ++ A+ D S ++L + + Y G+A + G+++ A E + +AI
Sbjct: 99 AYYDRALAETELGNYQEAITDYSQAIELKPKQERIYLNRGIAYAQQGKFESAIEDYNRAI 158
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
+L+ N +A+ + + E A+ L++ LY +K Y
Sbjct: 159 ELNENLADAYANRGVTRAAMGEKESAIADLEKAGKLYQEKGLEGLYQ 205
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI+ + GK AI+ +++ + A R A + AI+D+++AI+ P
Sbjct: 69 RGISYLELGKLEKAIADQTNVIELNASNAGAYYDRALAETELGNYQEAITDYSQAIELKP 128
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A A G+ AI+D ++A+E N AD RG+ + +A+ DL
Sbjct: 129 KQERIYLNRGIAYAQQGKFESAIEDYNRAIELNENLADAYANRGVTRAAMGEKESAIADL 188
Query: 507 SACVKLDKE 515
KL +E
Sbjct: 189 EKAGKLYQE 197
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
L+RGIA +GK+ SAI +++ ++ + +A RG RA E E+AI+D +A
Sbjct: 135 LNRGIAYAQQGKFESAIEDYNRAIELNENLADAYANRGVTRAAMGEKESAIADLEKA 191
Score = 39.7 bits (91), Expect = 6.0, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 58/120 (48%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++GI ++ ++ AV LS + + E + AY + G++ +G+ +KA I+L+
Sbjct: 34 DQGIEAYQKGEYETAVSALSQAITEEIEPEKAYYFRGISYLELGKLEKAIADQTNVIELN 93
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ +L N ++A+ Q + + + + Y RG+ G+ + AI+D
Sbjct: 94 ASNAGAYYDRALAETELGNYQEAITDYSQAIELKPKQERIYLNRGIAYAQQGKFESAIED 153
Score = 39.7 bits (91), Expect = 6.6, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
S L K K I + ++ +++ A A R LA+ L N+ +AI + +
Sbjct: 72 SYLELGKLEKAIADQTNVIELNASNAGAYYDR-ALAE-TELGNYQEAITDYSQAIELKPK 129
Query: 69 IQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ I NR Y+Q + I D ++A++L+ L AY +G +A+G KE A++ E
Sbjct: 130 QERIYLNRGIAYAQQGKFESAIEDYNRAIELNENLADAYANRGVTRAAMGEKESAIADLE 189
Query: 128 KG 129
K
Sbjct: 190 KA 191
>gi|391232538|ref|ZP_10268744.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
gi|391222199|gb|EIQ00620.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
Length = 706
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G +A AI+ +D+ LK P +A RG + + +AA+ DF+ I P+ EAW
Sbjct: 49 KGNHAGAIAAYDRALKLLPEEADAWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWA 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA A+ + EA +D ++ALE +P A I +RG ++ + +AA+ D + L
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168
Query: 514 KENKSAYTYLGLALSSIG 531
GLAL+ +G
Sbjct: 169 P---------GLALAHLG 177
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P I RG A LE A++ + EA++++P +A K G L EA + LS
Sbjct: 477 PVVQINRGEALHRLGRLEEAVTAYQEALRTDPGLADARKDLGLLLMELNRLDEADEQLSD 536
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
A + PNS D + RG+V D+ AA++ + D + K +Y +L L L+
Sbjct: 537 AGKLAPNSGDAPNLRGLVRLISADYPAAIDRFQEAID-DYKTKQSYVHLSLYLA 589
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
R RG ++ G+ +A++ FD L P A +GR + + + AI+ ++EAI
Sbjct: 140 IREQRGRISLDRGELDAALADFDGALALSPGLALAHLGRARVFHARGDTQGAIAAYSEAI 199
Query: 443 QSNPSAGEAWKRRGQARAALGES--VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++P +A+ RG+ L E EA +D+ AL P A + R V ++ F
Sbjct: 200 AADPLLADAF--RGRTAMLLEEKRFGEAARDIDSALVLAPRDASLWLARARV-WRATGFP 256
Query: 501 A-AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWGH 556
A+ D++ ++L N +A LAL G+ A +L A++ D NF AW
Sbjct: 257 ENALVDIARSLELSPRNTAALVEQALALEDTGDTAAALR-NLDAVRKAAPDENF--AWLQ 313
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ Y L + L + + ++A RG
Sbjct: 314 TARIYGKLRRVAEIPPLLTPFIEAHPQDAEALSTRG 349
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + K A F Q L+ DP RG + EL+AA++DF A+ +
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168
Query: 446 PSAGEAWKRRGQARA--ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P G A G+AR A G++ AI S+A+ +P AD R + + K F A
Sbjct: 169 P--GLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAA 226
Query: 504 EDLSACVKLDKENKSAY 520
D+ + + L + S +
Sbjct: 227 RDIDSALVLAPRDASLW 243
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 20/235 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + K +A+ F ++ P EA RG A + + A DFT+A++ +
Sbjct: 75 ARGESHLALVKPDAALGDFSHVITLRPAMAEAWAARGQAYLAMAKPDEAFRDFTQALELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P ++RG+ GE A+ D AL P A + H RG D
Sbjct: 135 PKQAGIREQRGRISLDRGELDAALADFDGALALSPGLALAHLGRARVFHARG-------D 187
Query: 499 FNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ S + D A+ T + L GE + ++ L D + W
Sbjct: 188 TQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSALVLAPRDASL---WL 244
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ ++ E AL + + L + R + A + L L G A+++L +
Sbjct: 245 ARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALEDTGDTAAALRNLDA 299
>gi|319781537|ref|YP_004141013.1| hypothetical protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167425|gb|ADV10963.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 280
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y +A+ F+Q ++ +P + +A R + F EAA++D+ +IQ N
Sbjct: 72 RGSAYGRGGQYQAALKDFNQAIQLNPNFFQAYSNRALIQRFLGNQEAALADYNRSIQINS 131
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG G + +A D KA++ + A H RG++ A+ED
Sbjct: 132 NYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDF 191
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + Y GL+ + + A AI+LD EAW + Y+ +
Sbjct: 192 STAISLAPDAAEPYNGRGLSYLATNDEDNAFSDFNMAIKLDGKNAEAWANQALIYERRGD 251
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + ++ + +D + A
Sbjct: 252 KAKAAKSYKEAVRLDPTYQPA 272
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + Q G +A++ +++ ++ + Y A IGRG + A +DF +AIQ +
Sbjct: 105 NRALIQRFLGNQEAALADYNRSIQINSNYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLD 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG + G+ AI+D S A+ P++A+ + RG+ D + A D
Sbjct: 165 TTDARAYHNRGLIYQSQGQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLATNDEDNAFSD 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +KLD +N A+ L G+ KA +++ +A++LD + A
Sbjct: 225 FNMAIKLDGKNAEAWANQALIYERRGDKAKAAKSYKEAVRLDPTYQPA 272
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS ++ P + + RG + + AA++D + ++L+ AY+
Sbjct: 48 SSENISSLSAVIQRNPQDPEGYNVRGSAYGRGGQYQAALKDFNQAIQLNPNFFQAYSNRA 107
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +G + A + ++IQ++ N+ A+ Y+ ++ A Q+ + +D
Sbjct: 108 LIQRFLGNQEAALADYNRSIQINSNYDAAYIGRGNLYRKAGRTQDAFNDFQKAIQLDTTD 167
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL+ GQHK AI+D S+
Sbjct: 168 ARAYHNRGLIYQSQGQHKFAIEDFST 193
>gi|196231899|ref|ZP_03130755.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196224021|gb|EDY18535.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 463
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G Y AI+ +++ L+ DP R R Q E AI+D T+AI +
Sbjct: 92 RAQARTDTGDYDGAIADYNKALELDPKDAHLYTWRAYVRNLQFRYEDAIADCTKAITIDA 151
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR G+ ++ DL++A+E P +A + RG ++ +D+ AV D
Sbjct: 152 KLPPAYSNRGYARRHEGDLAGSLADLNRAIELSPKTAAVYSSRGETKYEQRDYEGAVADY 211
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L +K Y G + ++A AI LD + EA+ +
Sbjct: 212 NQAITLQPNDKWHYIDRGRVRNRQRRMEEAIADFTHAITLDPHLAEAYADRGYAFVARNE 271
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+KA++ + L + + + Y RG L Q +A D
Sbjct: 272 FQKAIDDCNRALEENPKLTVVYRTRGRAYRALDQLDQAQADF 313
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + + Y A++ ++Q + P I RG R QR +E AI+DFT AI +
Sbjct: 193 SRGETKYEQRDYEGAVADYNQAITLQPNDKWHYIDRGRVRNRQRRMEEAIADFTHAITLD 252
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A A E +AI D ++ALE P + RG + A D
Sbjct: 253 PHLAEAYADRGYAFVARNEFQKAIDDCNRALEENPKLTVVYRTRGRAYRALDQLDQAQAD 312
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++ + +N +AY+ L + + +G++ A
Sbjct: 313 FRRMIESNPKNSTAYSSLAVTETLMGKWTDA 343
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
QR+ + I+D T I NP+ A+K R QAR G+ AI D +KALE +P A +
Sbjct: 65 QRKPDHIITDRTRRIARNPNDVRAYKDRAQARTDTGDYDGAIADYNKALELDPKDAHLYT 124
Query: 488 ERGIV-NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-------------------- 526
R V N +F+ + A+ D + + +D + AY+ G A
Sbjct: 125 WRAYVRNLQFR-YEDAIADCTKAITIDAKLPPAYSNRGYARRHEGDLAGSLADLNRAIEL 183
Query: 527 -------LSSIGE-------YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS--EKA 570
SS GE Y+ A + +AI L N + W ++ + E+A
Sbjct: 184 SPKTAAVYSSRGETKYEQRDYEGAVADYNQAITLQPN--DKWHYIDRGRVRNRQRRMEEA 241
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + +D ++AY RG + +KAI D
Sbjct: 242 IADFTHAITLDPHLAEAYADRGYAFVARNEFQKAIDD 278
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ F + DP EA RG A + E + AI D A++ NP ++ RG+A
Sbjct: 241 AIADFTHAITLDPHLAEAYADRGYAFVARNEFQKAIDDCNRALEENPKLTVVYRTRGRAY 300
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK-LDKENKS 518
AL + +A D + +E P ++ + + A++D + LD +
Sbjct: 301 RALDQLDQAQADFRRMIESNPKNSTAYSSLAVTETLMGKWTDALQDYRHSLTILDPDESY 360
Query: 519 AYTYLGLALSSIGE 532
+ Y+ L S GE
Sbjct: 361 LHLYIWLIRSQHGE 374
>gi|67459786|ref|YP_247410.1| hypothetical protein RF_1394 [Rickettsia felis URRWXCal2]
gi|67005319|gb|AAY62245.1| TPR [Rickettsia felis URRWXCal2]
Length = 273
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 21/229 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ + G+Y +AI ++++ L+ +P Y E+ I +GTA + + E AI F +AI+
Sbjct: 34 FNKGVLLEDLGEYETAIKLYNKALELNPNYFESHINKGTALSSLKRYELAIDSFNKAIKI 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFK 497
A+ + A LG+ + AI+ + ++ E N A+IL E
Sbjct: 94 KFDHPTAYYNKAYILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLE--------- 144
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ + +KL+ + +AY+ G+AL+ + +Y A E+ KAI+L+ N A+ +
Sbjct: 145 -----LKKYTQAIKLNPDYSTAYSNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNK 199
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
LA E+ALE + + +D AY +GL L LG++ A++
Sbjct: 200 GNILCTLAKYEQALELYDKTIELDLNDYDAYFNKGLALEELGKYDLALE 248
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ +T+AI+ NP A+ +G A A L + AI+ +KA+E PN++ +G +
Sbjct: 145 LKKYTQAIKLNPDYSTAYSNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILC 204
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ A+E ++LD + AY GLAL +G+Y A E++ KA++L+ + LE
Sbjct: 205 TLAKYEQALELYDKTIELDLNDYDAYFNKGLALEELGKYDLALESYNKALELEPDNLEVK 264
Query: 555 GHL 557
+
Sbjct: 265 AQI 267
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+A ++++LE + +AI+ NP+ EA+ +G LGE AI+ +KALE PN
Sbjct: 8 SAENYEKKLE----KYDKAIKRNPNDAEAYFNKGVLLEDLGEYETAIKLYNKALELNPNY 63
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ +G K + A++ + +K+ ++ +AY L+ +G+Y A +++ +
Sbjct: 64 FESHINKGTALSSLKRYELAIDSFNKAIKIKFDHPTAYYNKAYILAKLGKYILAIKSYKE 123
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
I+L+ H Y +LAN L+ Q + ++ +S AY +G+ L L ++
Sbjct: 124 VIKLES------SHFAAHY-NLANILLELKKYTQAIKLNPDYSTAYSNKGIALAKLKKYN 176
Query: 603 KAIKDLSSG 611
AI+ +
Sbjct: 177 LAIESFNKA 185
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+ Q +K +P Y A +G A A ++ AI F +AI+ NP+ A+ +G L
Sbjct: 148 YTQAIKLNPDYSTAYSNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILCTLA 207
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ +A++ K +E + N D +G+ + ++ A+E + ++L+ +N
Sbjct: 208 KYEQALELYDKTIELDLNDYDAYFNKGLALEELGKYDLALESYNKALELEPDN 260
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAK-LCSLRNWSKAIRILDSLLAQSYEI 69
Y L K K I I V + +S A LA L L+ +++AI+ L+ + +Y
Sbjct: 106 YILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLELKKYTQAIK-LNPDYSTAY-- 162
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
N+ ++L+ + I +KA++L+P AY+ KG L + E+AL +++K
Sbjct: 163 ---SNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILCTLAKYEQALELYDKT 219
Query: 130 YEHALHQ-SADLKQFLELEEL 149
E L+ A + L LEEL
Sbjct: 220 IELDLNDYDAYFNKGLALEEL 240
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA KY AI F++ ++ +P A + +G + E A+ + + I+ +
Sbjct: 164 NKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILCTLAKYEQALELYDKTIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ +A+ +G A LG+ A++ +KALE EP++ ++
Sbjct: 224 LNDYDAYFNKGLALEELGKYDLALESYNKALELEPDNLEV 263
>gi|209525411|ref|ZP_03273951.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209494091|gb|EDZ94406.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 404
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 72/127 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ G Y++AI Q ++ +P EA + RG A A ++A+S++T AI+ N
Sbjct: 186 NRGMEKIQAGDYSAAIVTLSQAVELNPALMEAYLNRGFAYAAMDSHQSALSNYTTAIRVN 245
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S+ E + RG+ LG EA+ D +KA++ +PN A+ +RG+++++ A D
Sbjct: 246 SSSPEPYYFRGEEYLQLGRFEEALTDYNKAIDLDPNRANAYLDRGLIHYQLDHLEKAAAD 305
Query: 506 LSACVKL 512
S +L
Sbjct: 306 FSKAAEL 312
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ RG+ + D++AA+ LS V+L+ AY G A +++ ++ A + AI+
Sbjct: 184 LNNRGMEKIQAGDYSAAIVTLSQAVELNPALMEAYLNRGFAYAAMDSHQSALSNYTTAIR 243
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + E + + Y L E+AL + + +D + AY RGL+ + L +KA
Sbjct: 244 VNSSSPEPYYFRGEEYLQLGRFEEALTDYNKAIDLDPNRANAYLDRGLIHYQLDHLEKAA 303
Query: 606 KDLSSGSRTM-------MPHLIWNLTR 625
D S + + + L +NL R
Sbjct: 304 ADFSKAAELLNHSQEPALKQLAFNLAR 330
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + AAI ++A++ NP+ EA+ RG A AA+ A+ + + A+
Sbjct: 184 LNNRGMEKIQAGDYSAAIVTLSQAVELNPALMEAYLNRGFAYAAMDSHQSALSNYTTAIR 243
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+S + + RG + F A+ D + + LD +AY GL + +KA
Sbjct: 244 VNSSSPEPYYFRGEEYLQLGRFEEALTDYNKAIDLDPNRANAYLDRGLIHYQLDHLEKAA 303
Query: 538 EAHLKAIQL 546
KA +L
Sbjct: 304 ADFSKAAEL 312
>gi|428319180|ref|YP_007117062.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428242860|gb|AFZ08646.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 400
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 3/235 (1%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R ++G+A G+ AI+ +++ L P PEA R L AI+ + +AI+
Sbjct: 62 RYNQGVALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIE 121
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
PS EAW RG +L + EAI KA+ +P+ + + + K AA+
Sbjct: 122 LKPSYREAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAI 181
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++L + A+ GLAL+ Y +A ++ K +QL N AW
Sbjct: 182 ASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQ 241
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGSRTMMPH 618
+ E A+ + L + S+ ++ RGL L L + ++AI +S +T+ H
Sbjct: 242 MGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAI---ASWDKTLELH 293
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ +D+ ++ P +A RG A A ++ A++ + + +Q P++ AW +RG A
Sbjct: 179 AAIASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTA 238
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
A +G+ AI KAL +PN ++ + RG+ + F A+ ++L +N
Sbjct: 239 IAQMGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTE 298
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+ +AL I + +A ++ K I L
Sbjct: 299 AWYNRAIALKKIQRFTEAIASYDKIIAL 326
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG V+ K++ AI+ +++ + P Y EA + A + AAI+ + +AI+
Sbjct: 132 NRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELK 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A EA+ K L+ PNSA ++RG + F AA+
Sbjct: 192 PDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIAS 251
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ L + + GLAL+++ +++A + K ++L + EAW
Sbjct: 252 WDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAW 300
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 5/237 (2%)
Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S KSI+V+ + RG A G++ +AI +++ ++ +P + EA +G A
Sbjct: 13 SGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKL 72
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+LE AI+ + +++ P+ EAW R L EAI KA+E +P+ +
Sbjct: 73 GQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSYREAWTN 132
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + F+ A+ + + + A+ AL + A ++ KAI+L
Sbjct: 133 RGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELKP 192
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + D +A+ + L + + A++ RG + +G+ + AI
Sbjct: 193 DLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAI 249
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +E Y A++ +D+ L+ P A RGTA A + EAAI+ + +A+
Sbjct: 200 NRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASWDKALALK 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG A A L EAI K LE P++ + + R I K + F A+
Sbjct: 260 PNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWYNRAIALKKIQRFTEAIAS 319
Query: 506 LSACVKLDKENKSAY 520
+ L ++ + Y
Sbjct: 320 YDKIIALKPDDPNLY 334
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 95/206 (46%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +++ ++ P Y EA RG + AI+ + +AI P EAW + A
Sbjct: 112 AIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFAL 171
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
++ AI KA+E +P+ + RG+ K + AV ++L + +A
Sbjct: 172 RKSDQNTAAIASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAA 231
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G A++ +G+++ A + KA+ L N E + + +L E+A+ + L
Sbjct: 232 WNKRGTAIAQMGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLE 291
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++A++ R + L + + +AI
Sbjct: 292 LHPDNTEAWYNRAIALKKIQRFTEAI 317
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E I ++I N + RG A A+G AI+ +A+E EP + + +G
Sbjct: 7 IEKPIDSGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQG 66
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K A+ + + + N A+ L + +A ++ KAI+L ++
Sbjct: 67 VALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSY 126
Query: 551 LEAWGH-------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
EAW + L +F + +A+ EKA+ + Y + ++KA+ LR
Sbjct: 127 REAWTNRGNTLVSLEKFSEAIASYEKAIAI--KPDYCEAWYNKAFALR 172
>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
Length = 1269
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
W L ++ +R+ K + S + +G +G+ +A++ F + ++
Sbjct: 554 WQKLIAGTDGLERSLKLLTVSPPVDGNESARSQFEQGKQLAQQGELKAAVASFTKAIRLQ 613
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P Y A G A ++E AI+ + + + NP+ +A G G++ EAI
Sbjct: 614 PDYIAAYNQLGNALQGLGQIEGAIAAYQKLLTINPNVAQAHCNLGSIWQMQGKTQEAIAA 673
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+A++ +PN A G + + + A + L V+L E+ +AY LG L IG
Sbjct: 674 YQRAIQLQPNFAVAYLNLGRLYANQQSWLEAKQCLQQAVRLQPESVAAYYNLGNVLGQIG 733
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+ +KA A++ +F++ W L + + +KA C QQV+ + + + +
Sbjct: 734 QIEKAIACLHHALKHQPDFVDTWHSLGCLWMAQGDMDKAQTCFQQVVTLQPDYPQVHGNL 793
Query: 592 GLLLHGLGQHKKAIKD 607
G +L GQ A+++
Sbjct: 794 GYVLQVQGQLTAALEN 809
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,452,156,016
Number of Sequences: 23463169
Number of extensions: 403040683
Number of successful extensions: 1932236
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13659
Number of HSP's successfully gapped in prelim test: 11543
Number of HSP's that attempted gapping in prelim test: 1616768
Number of HSP's gapped (non-prelim): 177425
length of query: 741
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 591
effective length of database: 8,839,720,017
effective search space: 5224274530047
effective search space used: 5224274530047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)