BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004624
(741 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F7EL49|AF1L1_XENTR Actin filament-associated protein 1-like 1 OS=Xenopus tropicalis
GN=afap1l1 PE=3 SV=1
Length = 758
Score = 39.7 bits (91), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 EGWLHLIRSNRIGLQYSRKRYF--------LLEDHFLKSFKSVPHSKNEDPVRSAIIDSC 64
E LHL+R +RI RK+ F L++D+ L +KS SK+ P + C
Sbjct: 208 EASLHLVRDSRICAFLLRKKRFGQWAKQLTLIKDNKLLCYKS---SKDRQPHLEIPLALC 264
Query: 65 --IRVTDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPH 122
V +GR H F+L N + L L S E+A +W+ ++E P
Sbjct: 265 NVAYVPKDGRRKKHE---LRFSLPN----GEMLVLAVQSREQAEEWLRVIKEVI---SPS 314
Query: 123 QGVGDHIGCPNSPWESFRLSGSSRASHTKSID 154
G P SP RL R SH K+ D
Sbjct: 315 TG-----SSPASPALRHRLDLDKRLSHDKTSD 341
>sp|Q9JMD3|PCTL_MOUSE PCTP-like protein OS=Mus musculus GN=Stard10 PE=1 SV=1
Length = 291
Score = 37.4 bits (85), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 251 YSDW-LPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVIT 309
Y W P +K RD++ R W Y+I+ +SV H K P +K VRA GY+I
Sbjct: 116 YYSWRCPKPLKNRDVITLRSWLPMG-ADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLI- 173
Query: 310 PMNHGKKSVVKHMLA 324
+ G KS V LA
Sbjct: 174 -QSTGPKSCVITYLA 187
>sp|Q4KWH8|PLCH1_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
OS=Homo sapiens GN=PLCH1 PE=1 SV=1
Length = 1693
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 32 RYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRES--IHRKV------FFIF 83
R F L++H + + P K+E +IDS +VT+ GR+S HR+ F
Sbjct: 40 RLFYLDEHRTR-LRWRPSRKSEKA--KILIDSIYKVTE-GRQSEIFHRQAEGNFDPSCCF 95
Query: 84 TLYNTSNHNDQLKLGASSPEEAAKWIHSLQ 113
T+Y+ NH + L L S+PEEA WI L+
Sbjct: 96 TIYH-GNHMESLDLITSNPEEARTWITGLK 124
>sp|Q4KWH5|PLCH1_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
OS=Mus musculus GN=Plch1 PE=2 SV=1
Length = 1682
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 32 RYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRES--IHRKV------FFIF 83
R F L++H + + P K+E +IDS +VT+ GR+S HR+ F
Sbjct: 40 RLFYLDEHRTR-LRWRPSRKSEKA--KILIDSIYKVTE-GRQSEIFHRQAEGNFDPSCCF 95
Query: 84 TLYNTSNHNDQLKLGASSPEEAAKWIHSLQ 113
T+Y+ NH + L L S+PEEA WI L+
Sbjct: 96 TIYH-GNHMESLDLITSNPEEARTWITGLK 124
>sp|Q9Y365|PCTL_HUMAN PCTP-like protein OS=Homo sapiens GN=STARD10 PE=1 SV=2
Length = 291
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 251 YSDW-LPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVIT 309
Y W P +K RD++ R W Y+I+ +SV H K P +K VRA GY+I
Sbjct: 116 YYSWRCPKPLKNRDVITLRSWLPMG-ADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLI- 173
Query: 310 PMNHGKKSVVKHMLA 324
+ G KS V LA
Sbjct: 174 -QSTGPKSCVITYLA 187
>sp|Q8TED9|AF1L1_HUMAN Actin filament-associated protein 1-like 1 OS=Homo sapiens
GN=AFAP1L1 PE=1 SV=2
Length = 768
Score = 37.0 bits (84), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 13 EGWLHLIRSNRIGLQYSRKRYF---------LLEDHFLKSFKSVPHSKNEDPVRSAIIDS 63
E +HL+R RI RK+ F + ED L +KS SK+ P +D+
Sbjct: 212 EASMHLVRECRICAFLLRKKRFGQWAKQLTVIREDQLL-CYKS---SKDRQPHLRLALDT 267
Query: 64 C--IRVTDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGP 121
C I V + R H F T + L L S E+A +W+ ++E + G
Sbjct: 268 CSIIYVPKDSRHKRHELRF-------TQGATEVLVLALQSREQAEEWLKVIREVSKPVGG 320
Query: 122 HQGVGDHIGCPNSPWESFRLSGSSRASHTK 151
+GV P SP +L R S K
Sbjct: 321 AEGV----EVPRSPVLLCKLDLDKRLSQEK 346
>sp|Q4V8Y7|AF1L1_DANRE Actin filament-associated protein 1-like 1 OS=Danio rerio
GN=afap1l1 PE=2 SV=1
Length = 746
Score = 36.2 bits (82), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 18 LIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSC--IRVTDNGRESI 75
L+R R G Q++ K+ ++ ++ L+ +KS SK++ P + C I V +GR
Sbjct: 221 LLRKKRFG-QWA-KQLTVIRENRLQCYKS---SKDQSPYTDIPLSLCSVIYVPKDGRRKK 275
Query: 76 HRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHIGCPNSP 135
H FTL + L L S E+A KW+H +++ G G+ + P+SP
Sbjct: 276 HE---LRFTLPG----GEALVLAVQSKEQAEKWLHVVRDVT-------GQGNGLDSPSSP 321
>sp|Q923Q2|STA13_MOUSE StAR-related lipid transfer protein 13 OS=Mus musculus GN=Stard13
PE=1 SV=5
Length = 1113
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 235 VVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVILYHSVFHKKCPRQ 293
VVE LD T+I ++ + + +P RD L+ R W+ + G ++ SV +++ +
Sbjct: 986 VVERLDKQTEI-YQYVLNSMVP--HPSRDFLVLRTWKTDLPKGMCTLVSLSVEYEEA-QL 1041
Query: 294 KGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWK 328
G VRA + Y+I P G KS + H+ ID K
Sbjct: 1042 MGGVRAVVMDSQYLIEPCGSG-KSRLTHICRIDLK 1075
>sp|Q9Y3M8|STA13_HUMAN StAR-related lipid transfer protein 13 OS=Homo sapiens GN=STARD13
PE=1 SV=2
Length = 1113
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 235 VVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVILYHSVFHKKCPRQ 293
VVE LD T+I ++ + + P RD ++ R W+ + G ++ SV H++ +
Sbjct: 986 VVETLDRQTEI-YQYVLNSMAP--HPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QL 1041
Query: 294 KGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWK 328
G VRA + Y+I P G KS + H+ ID K
Sbjct: 1042 LGGVRAVVMDSQYLIEPCGSG-KSRLTHICRIDLK 1075
>sp|Q8BM47|PKHM3_MOUSE Pleckstrin homology domain-containing family M member 3 OS=Mus
musculus GN=Plekhm3 PE=1 SV=1
Length = 761
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 23 RIGLQYSRKRY-FLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRV-TDN--GRESIHRK 78
R+ +Q + K + F+L +L +F P +EDP+ S +D C+ V DN G +S +
Sbjct: 370 RLTVQNNWKAFTFVLSKAYLMAFH--PGKLDEDPLLSYNVDVCLAVQIDNLDGCDSCFQV 427
Query: 79 VFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAA 116
+F D L+L A + + A +W+ +L+ AA
Sbjct: 428 IF----------PQDVLRLRAETRQRAQEWMEALKTAA 455
>sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing family A member 4 OS=Homo
sapiens GN=PLEKHA4 PE=1 SV=2
Length = 779
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDS-CIRVTDN 70
+ GWLH + + GL+ ++R+F+L H L +K S+ E + S ++ S IR
Sbjct: 57 IRGWLH--KQDSSGLRLWKRRWFVLSGHCLFYYKD---SREESVLGSVLLPSYNIRPDGP 111
Query: 71 GRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHIG 130
G R F FT + L A + E+ W+ +L A+ + GD G
Sbjct: 112 G---APRGRRFTFTAEHPGMRT--YVLAADTLEDLRGWLRALGRAS------RAEGDDYG 160
Query: 131 CPNSP 135
P SP
Sbjct: 161 QPRSP 165
>sp|P60669|PKHA4_RAT Pleckstrin homology domain-containing family A member 4 OS=Rattus
norvegicus GN=Plekha4 PE=2 SV=1
Length = 779
Score = 33.1 bits (74), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNG 71
+ GWLH + + GL+ ++R+F+L H L +K E+ V +++ V +G
Sbjct: 57 IRGWLH--KQDSSGLRLWKRRWFVLSGHCLFYYK----DSREESVLGSVLLPSYSVRPDG 110
Query: 72 RESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHIGC 131
R F FT + L A + E+ W+ +L +A+ + G+ G
Sbjct: 111 -PGAPRGRRFTFTAEHPGMRT--YVLAADTLEDLRGWLRALGKAS------RAEGEDCGL 161
Query: 132 PNSP 135
P SP
Sbjct: 162 PRSP 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,163,170
Number of Sequences: 539616
Number of extensions: 12547608
Number of successful extensions: 26585
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 26583
Number of HSP's gapped (non-prelim): 21
length of query: 741
length of database: 191,569,459
effective HSP length: 125
effective length of query: 616
effective length of database: 124,117,459
effective search space: 76456354744
effective search space used: 76456354744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)