Query 004624
Match_columns 741
No_of_seqs 318 out of 694
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 17:46:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004624.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1924-1928//hhsearch_pdb/004624hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fo5_A Thioesterase, adipose a 1.0 1 1 272.9 17.7 202 147-362 35-249 (258)
2 3p0l_A Steroidogenic acute reg 1.0 1 1 252.0 20.2 182 169-361 26-216 (221)
3 2r55_A STAR-related lipid tran 1.0 1 1 250.2 24.2 184 170-362 39-231 (231)
4 2pso_A STAR-related lipid tran 1.0 1 1 249.5 20.8 185 165-363 40-231 (237)
5 1jss_A Stard4, cholesterol-reg 1.0 1 1 246.1 20.9 175 173-359 42-223 (224)
6 1em2_A MLN64 protein; beta bar 1.0 1 1 245.2 23.3 180 172-362 40-228 (229)
7 3qsz_A STAR-related lipid tran 1.0 1 1 216.1 23.3 174 172-361 1-181 (189)
8 2e3n_A Lipid-transfer protein 1.0 1 1 215.9 23.5 188 166-362 39-249 (255)
9 1ln1_A PC-TP, phosphatidylchol 1.0 1 1 211.6 23.3 176 171-361 25-211 (214)
10 1v88_A Oxysterol binding prote 1.0 1 1 122.9 11.9 104 4-119 2-126 (130)
No 1
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=272.95 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=166.5
Q ss_pred CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHH
Q ss_conf 9999633698767755----322222333699968998528919998513789888789965799999925889999999
Q 004624 147 ASHTKSIDWTLCSGTH----MEQVTADVIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQT 222 (741)
Q Consensus 147 ~~~~~~~~w~~~~~~~----n~~~~~~~~a~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~Vfev 222 (741)
.-.++|++||++||+| |+.+++++.+.++|++..+++||+||++... .++.||++++|+++|++||++
T Consensus 35 ~~~p~~~~w~~~~~~~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~--------~~l~~k~~~~v~~~~~~v~~~ 106 (258)
T 3fo5_A 35 TEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD--------KFLSFHMEMVVHVDAAQAFLL 106 (258)
T ss_dssp TTSCSEEECCGGGHHHHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS--------SCEEEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECC--------CCEEEEEEEEEECCHHHHHHH
T ss_conf 789821165810112001478878873216589889850799699999789--------963999999990999999998
Q ss_pred HHC------CCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEC-CCC-EEEEEEECCCCCCCCCCC
Q ss_conf 843------999701989988424935999998406989999999708999999985-998-299999703799999999
Q 004624 223 LMS------LGASRSVGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDG-TYVILYHSVFHKKCPRQK 294 (741)
Q Consensus 223 L~d------~d~~R~e~~vIE~iD~~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~-~DG-sYVI~~~SV~Hp~~Pp~~ 294 (741)
|+| ||....++++|+++|++ +++|+...+. +++++++||||++|+||+. .+| .|+|+.+||.|+.+||++
T Consensus 107 L~D~~~R~~WD~~~~~~~vle~id~~-~ivY~~~~p~-~~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~ 184 (258)
T 3fo5_A 107 LSDLRQRPEWDKHYRSVELVQQVDED-DAIYHVTSPA-LGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 184 (258)
T ss_dssp HHCGGGGGGTCTTCCEEEEEEEEETT-EEEEEEEECC-CTTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCT
T ss_pred HHCCHHHHHHHHHCCEEEEEEECCCC-EEEEEEECCC-CCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 84911676760540479999990899-5999990487-667889977999999971068999799999963278899999
Q ss_pred CEEEEEEECEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91768970635999965999802999999463688623556662-256899999999999999985049
Q 004624 295 GSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSS-ARSITIRMLGRVAALRELFRAKQG 362 (741)
Q Consensus 295 G~VRaei~~sGyvI~Pl~~~~~s~VT~i~qvDlkGwip~~~~~~-~~~~~~~mL~~Va~LRe~~~~~~~ 362 (741)
|||||+++++||+|+|++++ .|+|+|+.|+|| |.+|.+.... ..+. .+.+...+|++++.....
T Consensus 185 g~VR~~~~~sg~~I~P~~~~-~t~VtY~~q~dp-G~lP~~~~n~~g~s~--~~~~t~~~~~~fl~~~~~ 249 (258)
T 3fo5_A 185 EYRRGETLCSGFCLWREGDQ-LTKVSYYNQATP-GVLNYVTTNVAGLSS--EFYTTFKACEQFLLDNRN 249 (258)
T ss_dssp TSEECCCSSEEEEEEEEETT-EEEEEEEESCCG-GGHHHHHHHHHTSCC--HHHHHHHHHHHHHHHTC-
T ss_pred CCEEEEECCCEEEEEECCCC-CEEEEEEEEECC-CCCCCEEEECCCCCH--HHHHHHHHHHHHHHHCCC
T ss_conf 97988971768999987999-889999994088-877715783453666--799999999999986465
No 2
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=1.00 E-value=1 Score=251.97 Aligned_cols=182 Identities=19% Similarity=0.182 Sum_probs=156.0
Q ss_pred CCCCCCCCEEEE-EECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHH-C------CCCCEEEEEEEEEEC
Q ss_conf 333699968998-52891999851378988878996579999992588999999984-3------999701989988424
Q 004624 169 DVIAPSPWTIFG-CQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLM-S------LGASRSVGCVVEHLD 240 (741)
Q Consensus 169 ~~~a~s~Wkl~~-~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~VfevL~-d------~d~~R~e~~vIE~iD 240 (741)
-+.+.++|++.+ .++|+.||++..++ .+++||++++|+++|++||++|+ | |+....++++||++|
T Consensus 26 ~~~~~~gW~~~~~~~~gv~vy~~~~~~-------~g~~~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~~ 98 (221)
T 3p0l_A 26 ILSNQEGWKKESQQDNGDKVMSKVVPD-------VGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIG 98 (221)
T ss_dssp HHHSCTTCEEEEECTTSCEEEEEECSS-------SCEEEEEEEEESSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEECS
T ss_pred HHHCCCCCEEEEECCCCCEEEEEECCC-------CCEEEEEEEEECCCHHHHHHHHHHCCCHHHHCCCCHHEEEEEEECC
T ss_conf 973878873926548996999987488-------8519999999919999999999856500433272312389999439
Q ss_pred CCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCC-CCEEEE
Q ss_conf 9359999984069899999997089999999859982999997037999999999176897063599996599-980299
Q 004624 241 GHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNH-GKKSVV 319 (741)
Q Consensus 241 ~~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~-~~~s~V 319 (741)
++++|+|.+..+ +.++++++||||++|+|++. +|.|+++.+|++||.+||++|||||++.++||+|+|+++ +++|+|
T Consensus 99 ~~t~I~y~~~~~-~~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~v 176 (221)
T 3p0l_A 99 KDTFITHELAAE-AAGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKL 176 (221)
T ss_dssp SSEEEEEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEECC-CCCCCCCCCEEEEEEEEEEC-CCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCEEE
T ss_conf 976999995055-56774488469999999971-9939999971348889999984887606508999977999981799
Q ss_pred EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999946368862355666225689999999999999998504
Q 004624 320 KHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQ 361 (741)
Q Consensus 320 T~i~qvDlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~ 361 (741)
||++|+|||||+|.++ ....++..+++.+.+||+.++..+
T Consensus 177 t~~~~~Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~~~ 216 (221)
T 3p0l_A 177 TWLLSIDLKGWLPKSI--INQVLSQTQVDFANHLRKRLESHP 216 (221)
T ss_dssp EEEECEECCSSCCHHH--HHHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEEEECCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 9999966999877899--998878999999999999985351
No 3
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=250.18 Aligned_cols=184 Identities=16% Similarity=0.119 Sum_probs=157.4
Q ss_pred CCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH--HCC------CCCEEEEEEEEEECC
Q ss_conf 336999689985289199985137898887899657999999258899999998--439------997019899884249
Q 004624 170 VIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTL--MSL------GASRSVGCVVEHLDG 241 (741)
Q Consensus 170 ~~a~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~VfevL--~d~------d~~R~e~~vIE~iD~ 241 (741)
+.+..+|++.++++|++||++..+. +.+++||++++|+++|++||++| +|. +....++++|+++|+
T Consensus 39 ~~~~~~W~~~~~~~gv~v~~~~~~~------~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i~~ 112 (231)
T 2r55_A 39 RRDTAGWKICREGNGVSVSWRPSVE------FPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITD 112 (231)
T ss_dssp HHCCSSCEEEECCSSEEEEEEECSS------SSSEEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSS
T ss_pred HCCCCCCEEEEECCCEEEEEECCCC------CCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCC
T ss_conf 5399999898837987999982577------9984899999988999999999876194145444446530599998189
Q ss_pred CEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECC-CCCEEEEE
Q ss_conf 35999998406989999999708999999985998299999703799999999917689706359999659-99802999
Q 004624 242 HTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN-HGKKSVVK 320 (741)
Q Consensus 242 ~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~-~~~~s~VT 320 (741)
+++|+|.. .+.+++|++++||||++|+|++.++|+|+|+.+|++||.+|+++|||||++.++||+|+|+. ++++|+||
T Consensus 113 ~~~i~~~~-~~~~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt 191 (231)
T 2r55_A 113 TLCVSRTS-TPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLV 191 (231)
T ss_dssp SEEEEEEE-CCCBTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEE
T ss_pred CEEEEEEE-ECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEE
T ss_conf 87999998-35656896578767999999993999899999865688899999978799872389999837999818999
Q ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999463688623556662256899999999999999985049
Q 004624 321 HMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 362 (741)
Q Consensus 321 ~i~qvDlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~ 362 (741)
|+.++||+||+|.++ ....++..++..+++||+.++...+
T Consensus 192 ~~~~~Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~~~~ 231 (231)
T 2r55_A 192 TFFHTDLSGYLPQNV--VDSFFPRSMTRFYANLQKAVKQFHE 231 (231)
T ss_dssp EEECEECCSSCCHHH--HHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred EEEEECCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999827898763999--9988767599999999999987069
No 4
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=249.48 Aligned_cols=185 Identities=22% Similarity=0.257 Sum_probs=154.0
Q ss_pred CCCCCCC-CCCCCEEEEEECCEEEEEECC-CCCCCCCCCCCCEEEEEEEECCCHHHHHH-HHHC---CCCCEEEEEEEEE
Q ss_conf 2222333-699968998528919998513-78988878996579999992588999999-9843---9997019899884
Q 004624 165 QVTADVI-APSPWTIFGCQNGLRLFKEGK-DRGSRGKWDDHPAIMAVGVVDGTSEAIFQ-TLMS---LGASRSVGCVVEH 238 (741)
Q Consensus 165 ~~~~~~~-a~s~Wkl~~~~nGIrVf~~~~-~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe-vL~d---~d~~R~e~~vIE~ 238 (741)
..+..+. ...+|++...++|++||++.. ++ +.++.||++++|+++|++++. +|.+ |+....++++||+
T Consensus 40 ~ll~~~~~~~~gW~~~~~~~gi~V~~k~~~~~------~~~~~~K~~~~v~~~~~~v~~~ll~dr~~Wd~~~~~~~vle~ 113 (237)
T 2pso_A 40 GLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDG------NPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVET 113 (237)
T ss_dssp HHHHHHHHHCCSCEEECCSSSCEEEEECCCSS------CCCCEEEEEEEESSCHHHHHHHHHHCGGGTCTTBCCCEEEEE
T ss_pred HHHHHHHCCCCCCEEEECCCCEEEEEEECCCC------CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEE
T ss_conf 99998645889987972379869999986899------971799999998689399999998536668754235999998
Q ss_pred ECCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEE
Q ss_conf 24935999998406989999999708999999985-99829999970379999999991768970635999965999802
Q 004624 239 LDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKS 317 (741)
Q Consensus 239 iD~~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~-~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~~~~s 317 (741)
+|++++|+|+++.+ ||++++||||++|+|++. ++|+|+|+.+|+.||.+||+ |||||+++++||+|+|++++ +|
T Consensus 114 id~~~~I~y~~~~~---p~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~~-~t 188 (237)
T 2pso_A 114 LDRQTEIYQYVLNS---MAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGSG-KS 188 (237)
T ss_dssp EETTEEEEEEEECC---SSSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECSTT-CE
T ss_pred CCCCCEEEEEEECC---CCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCC-CCEEEEEECCEEEEEECCCC-CE
T ss_conf 39993999998027---888677089999999998799979999981358888999-96989995568999978999-78
Q ss_pred EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999994636886235566622568999999999999999850499
Q 004624 318 VVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQGN 363 (741)
Q Consensus 318 ~VT~i~qvDlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~~ 363 (741)
+|||++++|||||+|.+++... ...+...+.+||+.|++....
T Consensus 189 ~vt~~~~~Dp~G~iP~~ln~~~---~~~~~~~l~~LR~~~~~~~~~ 231 (237)
T 2pso_A 189 RLTHICRIDLKGHSPEWYSKGF---GHLCAAEVARIRNSFQPLIAE 231 (237)
T ss_dssp EEEEEEEECCSSSCTTTTTTHH---HHHHHHHHHHHHHTTSCC---
T ss_pred EEEEEEEECCCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999679978648999888---799999999999999860589
No 5
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=246.12 Aligned_cols=175 Identities=13% Similarity=0.142 Sum_probs=150.5
Q ss_pred CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCC------CCCEEEEEEEEEECCCEEEE
Q ss_conf 999689985289199985137898887899657999999258899999998439------99701989988424935999
Q 004624 173 PSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSL------GASRSVGCVVEHLDGHTDII 246 (741)
Q Consensus 173 ~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~VfevL~d~------d~~R~e~~vIE~iD~~tdIv 246 (741)
.++|++.+.++||+||++.... +.++.||++++|+++|++||++|+|. +....++++||++|++++|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~~------~~~~~~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id~~~~I~ 115 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSEE------FNGYLYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENCCVM 115 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECSS------SSSEEEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTEEEE
T ss_pred CCCCEEEEECCCEEEEEEECCC------CCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEE
T ss_conf 7999999978988999984268------9865999999991899999999867454134152002689999848985999
Q ss_pred EEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCC-CCEEEEEEEEEE
Q ss_conf 9984069899999997089999999859982999997037999999999176897063599996599-980299999946
Q 004624 247 HKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNH-GKKSVVKHMLAI 325 (741)
Q Consensus 247 Y~~~~~~~~P~~vspRDFV~lR~wrr~~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~-~~~s~VT~i~qv 325 (741)
|+.+.+.+ ++++++||||++|+|++.++| |+++.+||+||.+| +|||||++.++||+|+|+.+ +++|+|||++|+
T Consensus 116 y~~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~ 191 (224)
T 1jss_A 116 RYTTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQT 191 (224)
T ss_dssp EEEECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETTEEEEEEEEEEECE
T ss_pred EEECCCCC-CCCCCCCEEEEEEEEEECCCE-EEEEEEEEECCCCC--CCCEEEEECCCEEEEEECCCCCCCEEEEEEEEE
T ss_conf 99815656-787899848999999986990-99999635569899--997899702558999975899995599999986
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3688623556662256899999999999999985
Q 004624 326 DWKCWRSYLQPSSARSITIRMLGRVAALRELFRA 359 (741)
Q Consensus 326 DlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~ 359 (741)
|||||+|.++ ....++..++..+.+||++++.
T Consensus 192 Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 192 DLRGMIPQSA--VDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp ECCSCCCHHH--HHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7898761999--9998777599999999999850
No 6
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=245.18 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=153.7
Q ss_pred CCCCCEEEEEE-CCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHH-HHHHC------CCCCEEEEEEEEEECCCE
Q ss_conf 69996899852-89199985137898887899657999999258899999-99843------999701989988424935
Q 004624 172 APSPWTIFGCQ-NGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIF-QTLMS------LGASRSVGCVVEHLDGHT 243 (741)
Q Consensus 172 a~s~Wkl~~~~-nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~Vf-evL~d------~d~~R~e~~vIE~iD~~t 243 (741)
+.++|++.... +|++||++..+. .+..+|++++++++|++|| +++.| |+....++++|+++++++
T Consensus 40 ~~~~W~~~~~~~~g~~vy~~~~~~-------~g~~~k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~~~~t 112 (229)
T 1em2_A 40 QEENWKFEKNNEYGDTVYTIEVPF-------HGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNT 112 (229)
T ss_dssp TGGGCEEEEECTTCCEEEEEEETT-------TEEEEEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTE
T ss_pred CCCCCEEEEECCCCCEEEEEECCC-------CCCEEEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCE
T ss_conf 978987978648997899986178-------9835999998538899999998848620110165661279989628985
Q ss_pred EEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECC-CCCEEEEEEE
Q ss_conf 999998406989999999708999999985998299999703799999999917689706359999659-9980299999
Q 004624 244 DIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN-HGKKSVVKHM 322 (741)
Q Consensus 244 dIvY~~~~~~~~P~~vspRDFV~lR~wrr~~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~-~~~~s~VT~i 322 (741)
+|+|....+. ++|++++||||++|+|++. ++.|+++.+||.|+.+||++|||||++.++||+|+|+. ++++|.|||+
T Consensus 113 ~I~~~~~~p~-~~~~~~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~ 190 (229)
T 1em2_A 113 LISYDVSAGA-AGGVVSPRDFVNVRRIERR-RDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWI 190 (229)
T ss_dssp EEEEEEECCB-TTTTBCCEEEEEEEEEEEC-SSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEE
T ss_pred EEEEEEECCC-CCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEE
T ss_conf 9999986676-7887689706999999974-9979999732358888999998866602318999955999996899999
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9463688623556662256899999999999999985049
Q 004624 323 LAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 362 (741)
Q Consensus 323 ~qvDlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~ 362 (741)
+++|||||+|.++ ....+...|+..+.+||++++...+
T Consensus 191 ~~~Dp~G~iP~~l--~n~~~~~~~~~~~~~Lr~~~~~~~~ 228 (229)
T 1em2_A 191 LNTDLKGRLPRYL--IHQSLAATMFEFAFHLRQRISELGA 228 (229)
T ss_dssp ECEECCSSSCHHH--HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9977899878999--9988778899999999999998507
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=1.00 E-value=1 Score=216.10 Aligned_cols=174 Identities=13% Similarity=0.200 Sum_probs=146.8
Q ss_pred CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCC------CCCEEEEEEEEEECCCEEE
Q ss_conf 6999689985289199985137898887899657999999258899999998439------9970198998842493599
Q 004624 172 APSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSL------GASRSVGCVVEHLDGHTDI 245 (741)
Q Consensus 172 a~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVdaspe~VfevL~d~------d~~R~e~~vIE~iD~~tdI 245 (741)
++++|++.++++|++||++..++ +..+.||++++|+++|+++|++|.|. ++...++++|++ +++++|
T Consensus 1 ~~~~W~~~~~~~gv~v~~~~~~~------~~~~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~-~~~~~i 73 (189)
T 3qsz_A 1 MQDGWSLAKDAEGIKVYVRNVEG------SPLREFRGEVRLKAAADDVVKVLRDANAFRQWMPDVAASELLKA-TDTEQY 73 (189)
T ss_dssp --CCCEEEEEETTEEEEEECCTT------CSSCEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEE-CSSEEE
T ss_pred CCCCCEEEECCCCEEEEEEECCC------CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCCCEE
T ss_conf 99877898737998999985799------98279999999979999999999768776667875488999700-499419
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEE
Q ss_conf 99984069899999997089999999859982999997037999999999176897063599996599980299999946
Q 004624 246 IHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAI 325 (741)
Q Consensus 246 vY~~~~~~~~P~~vspRDFV~lR~wrr~~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~~~~s~VT~i~qv 325 (741)
+|++++ +||++++||||++++|++..+|.++|...+ .|+.+|+++|+||+.+..|||+|+| ++ ++|+|||++++
T Consensus 74 ~y~~~~---~p~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~-~~t~vt~~~~~ 147 (189)
T 3qsz_A 74 HYLDNS---APWPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA-DGVDVTYQMHA 147 (189)
T ss_dssp EEEEEC---CSSSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS-SSEEEEEEEEE
T ss_pred EEEEEE---CCCCCCCCCEEEEEEEEECCCCEEEEEEEC-CCCCCCCCCCEEEEEEEEEEEEEEE-CC-CEEEEEEEEEE
T ss_conf 999921---698728810699999999899849999872-8976578999598068447899998-99-93999999994
Q ss_pred ECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 368862355-666225689999999999999998504
Q 004624 326 DWKCWRSYL-QPSSARSITIRMLGRVAALRELFRAKQ 361 (741)
Q Consensus 326 DlkGwip~~-~~~~~~~~~~~mL~~Va~LRe~~~~~~ 361 (741)
||+||+|.+ ++......+. ..+.+||+.++.-+
T Consensus 148 dp~G~iP~~lvn~~~~~~~~---~~l~~L~k~~~~~~ 181 (189)
T 3qsz_A 148 SPGGSIPSWLANQTVVETPF---GTLKALRSHLRQAH 181 (189)
T ss_dssp CSCSSSCHHHHHHTTTHHHH---HHHHHHHHHHTC--
T ss_pred CCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHCH
T ss_conf 89999988999899998799---99999999862021
No 8
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=1.00 E-value=1 Score=215.89 Aligned_cols=188 Identities=15% Similarity=0.174 Sum_probs=149.2
Q ss_pred CCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEEC-CCHHHHHHHHHCC------CCCEEEEEEEEE
Q ss_conf 222333699968998528919998513789888789965799999925-8899999998439------997019899884
Q 004624 166 VTADVIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVD-GTSEAIFQTLMSL------GASRSVGCVVEH 238 (741)
Q Consensus 166 ~~~~~~a~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVd-aspe~VfevL~d~------d~~R~e~~vIE~ 238 (741)
+...+.+..+|++..+++|++||++..+..+ .....||++++++ ++|++|+++|+|. +....++++||+
T Consensus 39 ~~~~~~~~~~W~~~~~~~gv~vy~~~~~~~g----~~~~~~K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~ 114 (255)
T 2e3n_A 39 SLQDVGGDANWQLVVEEGEMKVYRREVEENG----IVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVET 114 (255)
T ss_dssp TTSCCTTCTTEEEEEEETTEEEEEECCEETT----EECCCEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEE
T ss_pred HHHHCCCCCCCEEEEECCCEEEEEEECCCCC----CEEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEEE
T ss_conf 7762378999589996898799997769998----310127999998689999999998295317546543150689999
Q ss_pred ECCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEC----CC--CEEEEEEECCCCCCCCCCCCEEEEE---EECEEEEEE
Q ss_conf 24935999998406989999999708999999985----99--8299999703799999999917689---706359999
Q 004624 239 LDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE----DD--GTYVILYHSVFHKKCPRQKGSVRAC---LKSGGYVIT 309 (741)
Q Consensus 239 iD~~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~----~D--GsYVI~~~SV~Hp~~Pp~~G~VRae---i~~sGyvI~ 309 (741)
+|++++|+|++++ +||++++||||++|+|++. ++ +.|+++.+|+.|+.+|+++|+||++ .+.+||+|+
T Consensus 115 i~~~~~i~y~~~~---~p~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~ 191 (255)
T 2e3n_A 115 LADNAIIIYQTHK---RVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVS 191 (255)
T ss_dssp EETTEEEEEEEEC---CCTTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEEE---CCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEC
T ss_conf 4899789999952---6887588514999999952665568998899998645799888889978999883213326850
Q ss_pred EC-CC------CCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 65-99------9802999999463688623556662256899999999999999985049
Q 004624 310 PM-NH------GKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 362 (741)
Q Consensus 310 Pl-~~------~~~s~VT~i~qvDlkGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~ 362 (741)
|. ++ +++|+|||++++||+||+|.++. .......+...+.+||+++..+-.
T Consensus 192 ~~~g~~~l~~~~~~t~vt~~~~~Dp~G~iP~~lv--n~~~~~~~~~~l~~L~k~v~~~~~ 249 (255)
T 2e3n_A 192 PPEGNQEISRDNILCKITYVANVNPGGWAPASVL--RAVAKREYPKFLKRFTSYVQEKTA 249 (255)
T ss_dssp ---CCCCCCGGGEEEEEEEEEEEECSSCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHH--HHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 4788753356898589999998678975679999--999862550999999999998623
No 9
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=1.00 E-value=1 Score=211.59 Aligned_cols=176 Identities=15% Similarity=0.127 Sum_probs=144.9
Q ss_pred CCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEEC-CCHHHHHHHHHC------CCCCEEEEEEEEEECCCE
Q ss_conf 3699968998528919998513789888789965799999925-889999999843------999701989988424935
Q 004624 171 IAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVD-GTSEAIFQTLMS------LGASRSVGCVVEHLDGHT 243 (741)
Q Consensus 171 ~a~s~Wkl~~~~nGIrVf~~~~~~~~~~~~~~~~~~Ka~gvVd-aspe~VfevL~d------~d~~R~e~~vIE~iD~~t 243 (741)
.+..+|++..+++|++||++..+. +..+.||++++|+ ++|++|+++|+| |+....++++|+. ++ +
T Consensus 25 ~~~~~W~~~~~~~~v~v~~~~~~~------~~~~~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~-~~-~ 96 (214)
T 1ln1_A 25 LAGADWQLLVETSGISIYRLLDKK------TGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELYEQEC-NG-E 96 (214)
T ss_dssp CTTTTCEEEEEETTEEEEEEEETT------TTEEEEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEE-TT-E
T ss_pred CCCCCCEEEEECCCEEEEEECCCC------CCCEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHEEEECC-CC-C
T ss_conf 789986899977985999964699------984799999998799999999998198899999998852898546-99-8
Q ss_pred EEEEEEEECCCCCCCCCCCEEEEEEEEEECC-CC--EEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEE
Q ss_conf 9999984069899999997089999999859-98--29999970379999999991768970635999965999802999
Q 004624 244 DIIHKQLYSDWLPWGMKRRDLLLRRYWRRED-DG--TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVK 320 (741)
Q Consensus 244 dIvY~~~~~~~~P~~vspRDFV~lR~wrr~~-DG--sYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~~~~s~VT 320 (741)
+|+|++++. ||++++||||++|+|++.+ +| .|+++.+|+.||.+|+++|+||+++..+||+|+|++++ +|.||
T Consensus 97 ~i~~~~~~~---p~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~-~t~v~ 172 (214)
T 1ln1_A 97 TVVYWEVKY---PFPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKK-GSKVF 172 (214)
T ss_dssp EEEEEEECC---CTTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSS-SEEEE
T ss_pred EEEEEEEEC---CCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCC-CEEEE
T ss_conf 899999875---88889942899998774056998499999835348999877995899998999999639999-65999
Q ss_pred EEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99946368862355-666225689999999999999998504
Q 004624 321 HMLAIDWKCWRSYL-QPSSARSITIRMLGRVAALRELFRAKQ 361 (741)
Q Consensus 321 ~i~qvDlkGwip~~-~~~~~~~~~~~mL~~Va~LRe~~~~~~ 361 (741)
|+.++||+||+|.+ ++...... +...+.+||+.+...+
T Consensus 173 ~~~~~Dp~G~iP~~l~n~~~~~~---~~~~l~~l~k~~~~y~ 211 (214)
T 1ln1_A 173 MYYFDNPGGQIPSWLINWAAKNG---VPNFLKDMARACQNYL 211 (214)
T ss_dssp EEEEECCSSCCCHHHHHHHHHTH---HHHHHHHHHHHHHTC-
T ss_pred EEEEECCCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHCC
T ss_conf 99997899822389999999877---5899999999997264
No 10
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=1.00 E-value=1 Score=122.90 Aligned_cols=104 Identities=22% Similarity=0.347 Sum_probs=82.2
Q ss_pred CCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEE
Q ss_conf 76777873000299974413364222014799715420101127899998982479840616881488521026605999
Q 004624 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRESIHRKVFFIF 83 (741)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~RyfvL~g~~l~~yk~~p~~~~~~Pi~~~iid~~~rV~d~gr~~~h~~~~yvf 83 (741)
|+-.+.+.++|||++.| ...-|++|||||+++.|+|||.. .+ ..|++++.|.+|..++.. ..+.-|.|
T Consensus 2 ~~~~~~v~k~GwL~K~g----~~k~WkrRWfVLk~~~L~yyk~~-~~--~~p~G~I~L~~~~v~~~~-----~~~~~~~F 69 (130)
T 1v88_A 2 SSGSSGIVMADWLKIRG----TLKSWTKLWCVLKPGVLLIYKTQ-KN--GQWVGTVLLNACEIIERP-----SKKDGFCF 69 (130)
T ss_dssp CCSSSSCCEEEEEEECC----SSSSCEEEEEEEETTEEEEESCS-SS--CCCCEEEECSSCEECCCC-----TTTSSCEE
T ss_pred CCCCCCEEEEEEEEEEC----CCCCCEEEEEEEECCEEEEECCC-CC--CCCEEEEECCCCEEEECC-----CCCCCEEE
T ss_conf 88988667984789858----98884689999979999998788-87--772389984888998778-----77897399
Q ss_pred EEEECCCC---------------------CCEEEEECCCHHHHHHHHHHHHHHHHHC
Q ss_conf 99947799---------------------8649990279999999999999999818
Q 004624 84 TLYNTSNH---------------------NDQLKLGASSPEEAAKWIHSLQEAALKG 119 (741)
Q Consensus 84 ~iyn~~~~---------------------~~~~~~~a~~~eea~~W~~a~~~a~~~~ 119 (741)
.|++...+ .+.+.|.|.|.+|+..||+||+.|+...
T Consensus 70 ~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 70 KLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp EEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 998178654322367764413400026883689998899999999999999998418
Done!