BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004626
(741 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|164605000|dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea
brasiliensis]
Length = 740
Score = 1410 bits (3651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/741 (91%), Positives = 714/741 (96%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLK+RDS LGF KS+DFVRVCD ++ KSGR++ ++IRNS N ++ EL
Sbjct: 1 MATGAVPASFTGLKTRDSSLGFGKSMDFVRVCDLKRIKSGRKKISMIRNS-NPGPEMVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIRVQTMTT+DTKDVAGT
Sbjct: 60 QPASEGSPLLVPRQKYCESVHKTVRRKTRTVMVGNVALGSEHPIRVQTMTTSDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LEYT+D+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGMRA+ +QQGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 360 ANLGMRASTVQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSVC 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELP V+D+DARLALKRL+DISMGV
Sbjct: 420 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVEDNDARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELSTGA+KLLPEGTRLVVS RGDE YEELEILKDIDAT
Sbjct: 480 IVPLSEQLTKPLPNAMVLVNLKELSTGAHKLLPEGTRLVVSARGDEPYEELEILKDIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLPF EDKIGRV AARRLFE+LS+N LNFPVIHHIQFPN IHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPFTEDKIGRVHAARRLFEFLSDNALNFPVIHHIQFPNAIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG+LLEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ+ISA
Sbjct: 600 LLVDGLGDGILLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQDISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEGA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PPAEE
Sbjct: 720 TDALIQLIKDHGRWVDPPAEE 740
>gi|225435309|ref|XP_002285130.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Vitis vinifera]
gi|297746253|emb|CBI16309.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 1383 bits (3579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/741 (88%), Positives = 706/741 (95%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG++P SF GL+ D LG +KSVDFVRV D ++ GRR+ +VIRNS N SSDIAEL
Sbjct: 1 MATGSVPTSFSGLRRMDCNLGSSKSVDFVRVSDMQRITYGRRKVSVIRNS-NPSSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q +SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QASSEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LE+TD++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEFTDEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNP++MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPIIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMKASDIQQGVAPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PEL YKSLAAKLV+GMPFKDLATVDSILLRELP VDD+DARL LKRLVD+SMGV
Sbjct: 420 LDQLKTPELFYKSLAAKLVIGMPFKDLATVDSILLRELPPVDDNDARLTLKRLVDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AM LVNL+ELSTGAYKLLPEGTRLVVS+RGDE YE+LEILK++DAT
Sbjct: 480 ITPLSEQLTKPLPNAMALVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEDLEILKEVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KI RV +ARRLFEYLS+N LNFPVIHHIQFP GIHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPLTEEKISRVHSARRLFEYLSDNALNFPVIHHIQFPKGIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDGLLLEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGLLLEAPEQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PPAEE
Sbjct: 720 TDALIQLIKDHGRWVDPPAEE 740
>gi|147798613|emb|CAN72185.1| hypothetical protein VITISV_005654 [Vitis vinifera]
Length = 740
Score = 1377 bits (3564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/741 (88%), Positives = 704/741 (95%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG++P SF GL+ D LG +KSVDFVRV D ++ GRR+ +VIRNS N SSDIAEL
Sbjct: 1 MATGSVPTSFSGLRRMDCNLGSSKSVDFVRVSDMQRITYGRRKVSVIRNS-NPSSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q +SEGSPLLVPRQKYCESIHKTVRRKT TVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QASSEGSPLLVPRQKYCESIHKTVRRKTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LE+TD++YQKEL+HIE+VF+PLVEKCKKY RA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEFTDEDYQKELEHIEQVFTPLVEKCKKYXRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNP++MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPIIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMKASDIQQGVAPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PEL YKSLAAKLV+GMPFKDLATVDSILLRELP VDD+DARL LKRLVD+SMGV
Sbjct: 420 LDQLKTPELFYKSLAAKLVIGMPFKDLATVDSILLRELPPVDDNDARLTLKRLVDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AM LVNL+ELSTGAYKLLPEGTRLVVS+RGDE YE+LEILK++DAT
Sbjct: 480 ITPLSEQLTKPLPNAMALVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEDLEILKEVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KI RV +ARRLFEYLS+N LNFPVIHHIQFP GIHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPLTEEKISRVHSARRLFEYLSDNALNFPVIHHIQFPKGIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDGLLLEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGLLLEAPEQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PPAEE
Sbjct: 720 TDALIQLIKDHGRWVDPPAEE 740
>gi|224106738|ref|XP_002314268.1| predicted protein [Populus trichocarpa]
gi|222850676|gb|EEE88223.1| predicted protein [Populus trichocarpa]
Length = 741
Score = 1373 bits (3554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/741 (88%), Positives = 706/741 (95%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GL+ ++SGLGF KS+DFVR+CD ++ KSGR++ ++IRNS N+ DI EL
Sbjct: 1 MATGAVPASFSGLQMKESGLGFGKSMDFVRICDIKRIKSGRKKISMIRNS-NTGRDIVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNV +GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVPLGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM IAD+GAD+VR+TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV+E
Sbjct: 120 VEQVMIIADKGADIVRLTVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVSE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+L
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGMRAA++QQGVAPF+EK+R YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMRAAKIQQGVAPFKEKYRRYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLYKSLAAK+VVGMPFKDLATVDSI LRELP VDD+DARLALKRL+++SMGV
Sbjct: 420 LDQLKAPELLYKSLAAKIVVGMPFKDLATVDSIFLRELPPVDDNDARLALKRLIEVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVVSLRGDE YEELEILK IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPYEELEILKHIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+LHDLPF+EDKIGRV ARRLFEYL+EN LN PVIHH+QFP GIHRD+LVIGAGTN GA
Sbjct: 540 MLLHDLPFSEDKIGRVHTARRLFEYLAENALNVPVIHHLQFPKGIHRDELVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG+L+EAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVLIEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI ME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIEMESA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKD+GRW +PP E
Sbjct: 720 TDALIQLIKDNGRWVDPPPAE 740
>gi|402770461|gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
Length = 741
Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/741 (88%), Positives = 700/741 (94%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLKSRD GLGF KS+DFV+VCD ++ K R + +VIRNS N S+IAEL
Sbjct: 1 MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTKVSVIRNS-NPGSEIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPL+VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT DTKDV T
Sbjct: 60 QPASEGSPLVVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTTDTKDVDAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD GAD+VRITVQGKREADAC+EIKNSLVQKNY IPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADTGADIVRITVQGKREADACYEIKNSLVQKNYTIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEHVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A GM+AAELQQGVAPFEEK+R YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 AKFGMKAAELQQGVAPFEEKNRRYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
+DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP DD+D+RLALKRL++ISMGV
Sbjct: 420 MDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPADDNDSRLALKRLIEISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS+GAYKLLPEGTRLVVS+RGDE YE+L+ILK++DAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPEGTRLVVSVRGDEPYEDLDILKNVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+LHDLP+ EDKI RV AARRLFE+LSEN L+ PVIHHIQFP GIHRDDLVIGAG+N GA
Sbjct: 540 MVLHDLPYTEDKISRVHAARRLFEFLSENALDLPVIHHIQFPKGIHRDDLVIGAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG+LLEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVLLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VVKRGI ME A
Sbjct: 660 QIREQTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKMVVKRGIEMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKD+GRW +P AEE
Sbjct: 720 TDALIQLIKDNGRWVDPAAEE 740
>gi|356543460|ref|XP_003540178.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Glycine max]
Length = 741
Score = 1361 bits (3522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/742 (87%), Positives = 703/742 (94%), Gaps = 2/742 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKS-GRRRFTVIRNSSNSSSDIAE 59
MA+G +P +F LK+ DS LGFAKS+DFVRV D + KS R+R ++IRNS N DIAE
Sbjct: 1 MASGAVPTTFSTLKTWDSSLGFAKSMDFVRVSDLKSMKSSARKRVSIIRNS-NPGQDIAE 59
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
LQPAS GSPLLVPRQKYCES+HKTVRRKT TVMVGNVAIGSEHPIR+QTMTT DTKDVAG
Sbjct: 60 LQPASPGSPLLVPRQKYCESLHKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAG 119
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVE+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVA
Sbjct: 120 TVEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVA 179
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFE LEYT+++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTN
Sbjct: 180 ECFDKIRVNPGNFADRRAQFETLEYTEEDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTN 239
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAE 299
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
MYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRR
Sbjct: 300 MYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRR 359
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGM A+ELQ+GV PFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 360 LANLGMIASELQKGVEPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSV 419
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK PE+LYKSLAAKL+VGMPFKDLATVDSILLRE+P VDD DARLALKRL+DISMG
Sbjct: 420 SLDQLKMPEVLYKSLAAKLIVGMPFKDLATVDSILLREVPPVDDADARLALKRLIDISMG 479
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+AMVLVNL+E+S+ AYKLLP+GTRLVVS+RGDE YEEL+ILK IDA
Sbjct: 480 VITPLSEQLTKPLPNAMVLVNLKEISSRAYKLLPQGTRLVVSVRGDEPYEELDILKGIDA 539
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TM+LHDLP+ EDKI RV AARRLFEYLS+N+LNFPVIHHIQFPNGIHRDDLVIGAG++ G
Sbjct: 540 TMLLHDLPYTEDKISRVHAARRLFEYLSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAG 599
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
ALLVDGLGDGLLLEAP +DF+F+R+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+S
Sbjct: 600 ALLVDGLGDGLLLEAPDKDFEFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVS 659
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG PGKIDLYVGKTVVKRGIAME
Sbjct: 660 AQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGTPGKIDLYVGKTVVKRGIAMEH 719
Query: 720 ATDALIQLIKDHGRWAEPPAEE 741
AT+ALI LIK+HGRW +PPAEE
Sbjct: 720 ATNALIDLIKEHGRWVDPPAEE 741
>gi|356550161|ref|XP_003543457.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Glycine max]
Length = 742
Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/743 (86%), Positives = 703/743 (94%), Gaps = 3/743 (0%)
Query: 1 MATGT-LPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKS-GRRRFTVIRNSSNSSSDIA 58
MATG +P +F LK+ DS LGFAK++DFVRV D + KS R+R ++IRNS N DIA
Sbjct: 1 MATGAAVPTTFSTLKTWDSSLGFAKNIDFVRVSDMKSMKSSARKRVSIIRNS-NPGQDIA 59
Query: 59 ELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVA 118
ELQPAS GSPLLVPRQKYCES+HK +RRKT TVMVGNVAIGSEHPIR+QTMTT DTKDVA
Sbjct: 60 ELQPASPGSPLLVPRQKYCESLHKPIRRKTSTVMVGNVAIGSEHPIRIQTMTTTDTKDVA 119
Query: 119 GTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV 178
GTVE+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRV
Sbjct: 120 GTVEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV 179
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
AECFDKIRVNPGNFADRRAQFE LEYT+++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGT
Sbjct: 180 AECFDKIRVNPGNFADRRAQFETLEYTEEDYQKELEHIEKVFTPLVEKCKKYGRAMRIGT 239
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVA
Sbjct: 240 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVA 299
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
EMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR
Sbjct: 300 EMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCR 359
Query: 359 RLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMS 418
RLANLGMRA+ELQ+GV PFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMS
Sbjct: 360 RLANLGMRASELQKGVEPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMS 419
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISM 478
VSLDQLK PE+LYKSLAAKL+VGMPFKDLATVDSILLRELP VDD DARLALKRL+DISM
Sbjct: 420 VSLDQLKMPEVLYKSLAAKLIVGMPFKDLATVDSILLRELPPVDDADARLALKRLIDISM 479
Query: 479 GVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDID 538
GVITPL+EQLTKPLP+AMVLVNL+E+STGAYKLLP+GTRLVVS+RGDE YEEL+ILK +D
Sbjct: 480 GVITPLTEQLTKPLPNAMVLVNLKEISTGAYKLLPQGTRLVVSVRGDEPYEELDILKGVD 539
Query: 539 ATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNV 598
ATM+LHDLP+ ED+I RV AARRLFEYLS+N+LNFPVIHHIQFPNGIHRDDLVIGAG++
Sbjct: 540 ATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDA 599
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALLVDGLGDGLLLEAP +DF+F+R+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+
Sbjct: 600 GALLVDGLGDGLLLEAPDKDFEFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEV 659
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
SA+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG PGKIDLYVGKTVVKRGIAME
Sbjct: 660 SAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGTPGKIDLYVGKTVVKRGIAME 719
Query: 719 QATDALIQLIKDHGRWAEPPAEE 741
AT+ALI LIK+HGRW +PPAEE
Sbjct: 720 HATNALIDLIKEHGRWVDPPAEE 742
>gi|343466209|gb|AEM42998.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Siraitia
grosvenorii]
Length = 740
Score = 1357 bits (3511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/741 (87%), Positives = 697/741 (94%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGTLP+ GLK + LGFAK ++ V+V D + +S R+ V+RNS N SDIAEL
Sbjct: 1 MATGTLPSHLSGLKGGNVNLGFAKRLELVKVSDLKSVRSRGRKVLVVRNS-NPGSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVPRQKYCES +KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGT
Sbjct: 60 QPASEGSSLLVPRQKYCESTNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMR+AD+GAD+VRITVQGK+EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRVADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQF QLEYT+D+YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFVQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A LGMRAAELQQGV P+EEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSVS
Sbjct: 360 ATLGMRAAELQQGVVPYEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYK LAAKLVVGMPFKDLATVDSILLRELP VDD DARLALKRL+DISMGV
Sbjct: 420 LDQLKMPELLYKFLAAKLVVGMPFKDLATVDSILLRELPPVDDADARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AMVLVNL+ELS+GA+KLLP+GTRLVVS+RGDESY +LE+LK+IDAT
Sbjct: 480 ITPLSEQLTKPLPNAMVLVNLKELSSGAHKLLPDGTRLVVSVRGDESYNDLEVLKEIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+ HDL ++EDK+ RV AARRLFEYL+EN LNFPVIHHIQFP GIHRDDLVIGAG+N GA
Sbjct: 540 MLFHDLSYSEDKVSRVHAARRLFEYLAENALNFPVIHHIQFPKGIHRDDLVIGAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG+LLEAP +DFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVLLEAPDKDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAME A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMENA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PP EE
Sbjct: 720 TDALIQLIKDHGRWIDPPTEE 740
>gi|297793619|ref|XP_002864694.1| hypothetical protein ARALYDRAFT_919295 [Arabidopsis lyrata subsp.
lyrata]
gi|297310529|gb|EFH40953.1| hypothetical protein ARALYDRAFT_919295 [Arabidopsis lyrata subsp.
lyrata]
Length = 741
Score = 1356 bits (3509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/741 (86%), Positives = 698/741 (94%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS LGF KS++ R+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGVKVPDSKLGFGKSMNLARICDVRSLRSARRRVSVIRNS-NQGSDVAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+AGT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDIAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADRGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPAVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE +EYT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG++AAELQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGIKAAELQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDDH ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDHMARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK++DAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNMDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AGT GA
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVSFPVIHHINFPTGIHRDELVIHAGTYAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDF+FLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 720 TDALIGLIKEHGRWVDPPVAD 740
>gi|312282499|dbj|BAJ34115.1| unnamed protein product [Thellungiella halophila]
Length = 742
Score = 1355 bits (3507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/741 (86%), Positives = 698/741 (94%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA F G+KS S LGF K+++FVR+CD R +S RRR +V+ +SN SD+AEL
Sbjct: 1 MATGVLPAPFSGVKSSGSKLGFGKNINFVRICDLRSQRSARRRVSVVIRNSNQGSDLAEL 60
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKDVAGT
Sbjct: 61 QPASDGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDVAGT 120
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VEEVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 121 VEEVMRIADRGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 180
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE +EYT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 240
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 300
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 360
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 361 ANLGTKAAQLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 420
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD+ ARLALKRL+D+SMGV
Sbjct: 421 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDNVARLALKRLIDVSMGV 480
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLP+GTRLVVS+RGDE Y ELE+LK++DAT
Sbjct: 481 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPDGTRLVVSVRGDEPYSELEVLKNVDAT 540
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLPF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT GA
Sbjct: 541 MILHDLPFTEDKVSRVHAARRLFEFLSENSINFPVIHHINFPTGIHRDELVIHAGTYAGA 600
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIR+KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 661 EIRDKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 720
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 721 TDALISLIKEHGRWVDPPVAD 741
>gi|449462089|ref|XP_004148774.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 741
Score = 1355 bits (3507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/740 (87%), Positives = 700/740 (94%), Gaps = 1/740 (0%)
Query: 2 ATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQ 61
+ GTLP+ G K + LGF+K ++ V+V D + KS R+ +IRNS N SDIAELQ
Sbjct: 3 SAGTLPSHLSGWKGGNVNLGFSKRLESVKVFDLKSPKSRGRKVLIIRNS-NPGSDIAELQ 61
Query: 62 PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTV 121
PASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGTV
Sbjct: 62 PASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTV 121
Query: 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181
E+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAEC
Sbjct: 122 EQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC 181
Query: 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241
FDKIRVNPGNFADRRAQFEQLEYT+++YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNHG
Sbjct: 182 FDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG 241
Query: 242 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
SLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMY
Sbjct: 242 SLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 301
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLA
Sbjct: 302 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 361
Query: 362 NLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+AAELQQGV P+EEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL+SVSL
Sbjct: 362 TLGMKAAELQQGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLISVSL 421
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDD DARLALKRL+DISMGVI
Sbjct: 422 DQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDISMGVI 481
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
TPLSEQLTKPLP+AMVLVNL+ELS+GAYKLLP+GTRLVVS+RGDESY +L+ILK+ DATM
Sbjct: 482 TPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPDGTRLVVSVRGDESYNDLDILKETDATM 541
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ HDLP++EDK+ RV AARRLFEYLSEN L FPVIHHIQFPNG+HRDDLVIGAG+N GAL
Sbjct: 542 LFHDLPYSEDKVSRVHAARRLFEYLSENGLTFPVIHHIQFPNGVHRDDLVIGAGSNAGAL 601
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
LVDGLGDG+LLEAP +DFDF+R+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE
Sbjct: 602 LVDGLGDGVLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
Query: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQAT 721
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAME AT
Sbjct: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMENAT 721
Query: 722 DALIQLIKDHGRWAEPPAEE 741
+ALIQLIKD+GRWAEPP EE
Sbjct: 722 EALIQLIKDNGRWAEPPTEE 741
>gi|224132490|ref|XP_002328295.1| predicted protein [Populus trichocarpa]
gi|222837810|gb|EEE76175.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 1354 bits (3505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/760 (86%), Positives = 703/760 (92%), Gaps = 21/760 (2%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLK R+S LGF KSVDFVR+CD ++ KSGR+R ++I+NS N+ I EL
Sbjct: 1 MATGAVPASFSGLKMRESSLGFGKSVDFVRICDIKRIKSGRKRISMIQNS-NTGPGIVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPR+KYCESI+KTVRRKTRTV+VGNV +GSEHP+RVQTMTT DTKDVA T
Sbjct: 60 QPASEGSPLLVPRKKYCESINKTVRRKTRTVLVGNVPLGSEHPVRVQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE--------------------EVF 220
CFDKIRVNPGNFADRRAQFE+LEYT+D+Y+KEL+HIE +VF
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIENTPLSKWSPIKSFDFYFLLCQVF 239
Query: 221 SPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS 280
+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FS
Sbjct: 240 TPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFS 299
Query: 281 MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD 340
MKASNPVVMVQAYRLLVAEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD
Sbjct: 300 MKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD 359
Query: 341 TIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEG 400
TIRVSLTEPPE+EIDPCRRLANLGMRAAE+QQGVAPFEEKHRHYFDFQRRSGQLP+QKEG
Sbjct: 360 TIRVSLTEPPEEEIDPCRRLANLGMRAAEIQQGVAPFEEKHRHYFDFQRRSGQLPVQKEG 419
Query: 401 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK+VVGMPFKDLATVDSI LRELP
Sbjct: 420 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKIVVGMPFKDLATVDSIFLRELPP 479
Query: 461 VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVV 520
VDD+DARLALKRL+++SMGVI PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVV
Sbjct: 480 VDDNDARLALKRLIEVSMGVIAPLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVV 539
Query: 521 SLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQ 580
SLRGDE EELEIL+ +DATMILH LP +EDKIGRV AARRLFEYL + L+ PVIHHIQ
Sbjct: 540 SLRGDEPCEELEILEHVDATMILHVLPLSEDKIGRVHAARRLFEYLVDKALSVPVIHHIQ 599
Query: 581 FPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKT 640
FP G+ RDDLVIGAGT+ GALLVDGLGDG+L+EAP QDFDFLR+TSFNLLQGCRMRNTKT
Sbjct: 600 FPKGVRRDDLVIGAGTDAGALLVDGLGDGVLIEAPDQDFDFLRNTSFNLLQGCRMRNTKT 659
Query: 641 EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 700
EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG
Sbjct: 660 EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 719
Query: 701 KIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
KIDLYVGKTVVKRGI ME ATDALIQLIKD+GRW +PPAE
Sbjct: 720 KIDLYVGKTVVKRGIEMEHATDALIQLIKDNGRWVDPPAE 759
>gi|374639359|gb|AEZ55668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Salvia
miltiorrhiza]
Length = 742
Score = 1352 bits (3499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/742 (86%), Positives = 700/742 (94%), Gaps = 1/742 (0%)
Query: 1 MATGTLPASFPGLKSRDS-GLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAE 59
MATG +PASF GLKSRD GLGF KS DFVRV D ++ K GR + VIRNS+N S+ E
Sbjct: 1 MATGAVPASFTGLKSRDHRGLGFGKSSDFVRVSDLQRVKFGRSKVAVIRNSNNPGSETVE 60
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L+PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKD+AG
Sbjct: 61 LKPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDIAG 120
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVE+VMRIADQGADLVRITVQG++EADACFEIKNSLVQKNYNIPLVADIHFAP VA+RVA
Sbjct: 121 TVEQVMRIADQGADLVRITVQGRKEADACFEIKNSLVQKNYNIPLVADIHFAPPVAMRVA 180
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFEQLEYTDD+YQKEL+HIE+VFSPLVEKCKKYGRA+RIGTN
Sbjct: 181 ECFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVFSPLVEKCKKYGRAMRIGTN 240
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFE+ARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 241 HGSLSDRIMSYYGDSPRGMVESAFEYARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAE 300
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPCRR
Sbjct: 301 MNVLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCRR 360
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGM+ AELQ+GVAPFEEK+R YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 361 LANLGMKTAELQKGVAPFEEKNRRYFDFQRRNGQLPVQKEGEEVDYRGVLHRDGSVLMSV 420
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK+PELLYKSLAAKL+VGMPFKDLATVDSILLRELPS DD DARLALKRL+D+SMG
Sbjct: 421 SLDQLKSPELLYKSLAAKLIVGMPFKDLATVDSILLRELPSQDDKDARLALKRLIDVSMG 480
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+A+ +V L+ELS+GA++LLPEGTRLVVSLRGDE EELEILK DA
Sbjct: 481 VITPLSEQLTKPLPNALAMVTLKELSSGAHQLLPEGTRLVVSLRGDEPQEELEILKTADA 540
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TMILH +P++++K RV AARRLFEYLSEN+L+FPVIHHI+FP GIHRDDLVIGAGTN G
Sbjct: 541 TMILHHIPYSDEKTSRVHAARRLFEYLSENSLDFPVIHHIEFPKGIHRDDLVIGAGTNAG 600
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
ALLVDGLGDG+LLE+P Q+F+FLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS
Sbjct: 601 ALLVDGLGDGILLESPDQEFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 660
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
AEIR++TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME
Sbjct: 661 AEIRDRTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEH 720
Query: 720 ATDALIQLIKDHGRWAEPPAEE 741
ATDALI+LIK+HGRW +PP EE
Sbjct: 721 ATDALIELIKEHGRWVDPPVEE 742
>gi|30697395|ref|NP_851233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|391359289|sp|F4K0E8.1|ISPG_ARATH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic; AltName:
Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase; AltName: Full=Protein CHLOROPLAST BIOGENESIS
4; AltName: Full=Protein CONSTITUTIVE SUBTILISIN 3;
Flags: Precursor
gi|332009970|gb|AED97353.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 741
Score = 1351 bits (3496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/741 (86%), Positives = 695/741 (93%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 720 TDALIGLIKEHGRWVDPPVAD 740
>gi|20453201|gb|AAM19840.1| AT5g60600/mup24_10 [Arabidopsis thaliana]
Length = 741
Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/741 (86%), Positives = 695/741 (93%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVG+VA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGDVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 720 TDALIGLIKEHGRWVDPPVAD 740
>gi|357453895|ref|XP_003597228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
gi|355486276|gb|AES67479.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
Length = 767
Score = 1347 bits (3487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/768 (84%), Positives = 703/768 (91%), Gaps = 28/768 (3%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
M GT+PASF L++ DSGLGF KS+DFVRV D ++ KS RR+ ++IRNS N S DIAEL
Sbjct: 1 MVAGTVPASFSSLRTCDSGLGFGKSIDFVRVSDLQRMKSSRRKVSIIRNS-NPSQDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V IGS+HPIR+QTMTT DTKDVAGT
Sbjct: 60 QPASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGK+EADACFEIKNSLVQKNYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEV--------------------- 219
CFDKIRVNPGNFADRRAQFE LEYT+D+YQKEL+HIE+V
Sbjct: 180 CFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQVKPPPLVLYLKFLSRARICSFV 239
Query: 220 ------FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273
F+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD
Sbjct: 240 NTSVRVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 299
Query: 274 FHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTL 333
+HNF+FSMKASNPVVMVQAYRLLVAEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTL
Sbjct: 300 YHNFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTL 359
Query: 334 LQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQ 393
LQDGLGDTIRVSLTEPPE+EIDPC RLANLG RAAELQ+GVAPFEEKHRHYFDFQRRSGQ
Sbjct: 360 LQDGLGDTIRVSLTEPPEEEIDPCTRLANLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQ 419
Query: 394 LPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSI 453
LP+QKEGEEVDYRG LHRDGSVLMSVSL+QLK PELLYKSL+AKL+VGMPFKDLATVDSI
Sbjct: 420 LPLQKEGEEVDYRGTLHRDGSVLMSVSLEQLKTPELLYKSLSAKLIVGMPFKDLATVDSI 479
Query: 454 LLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLP 513
LLRELP VDD DARLALKRL DISMGVITPLSEQLTKPLP+A+VLVNL+ELSTGA+KLLP
Sbjct: 480 LLRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELSTGAHKLLP 539
Query: 514 EGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNF 573
+GTRLVVS+RGDE YEELEILKD+DATM+LHDLP+ ED+I RV AARRLFEYLS+N+L+F
Sbjct: 540 QGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLDF 599
Query: 574 PVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGC 633
PVIHHIQFPNGIHRDDLVIGAG++ GALLVDGLGDGLLLEA +DFDFLR+TSFNLLQGC
Sbjct: 600 PVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDGLLLEASDKDFDFLRNTSFNLLQGC 659
Query: 634 RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG 693
RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG
Sbjct: 660 RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG 719
Query: 694 YVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
YVGGAPGKIDLYVGKTVVKR IAMEQATDALI LIK+HGRW +PP EE
Sbjct: 720 YVGGAPGKIDLYVGKTVVKRAIAMEQATDALIDLIKEHGRWVDPPVEE 767
>gi|19698829|gb|AAL91150.1| GcpE protein [Arabidopsis thaliana]
gi|34365569|gb|AAQ65096.1| At5g60600 [Arabidopsis thaliana]
Length = 741
Score = 1347 bits (3487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/741 (86%), Positives = 694/741 (93%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPI +QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIGIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 660 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 720 TDALIGLIKEHGRWVDPPVAD 740
>gi|350539411|ref|NP_001234648.1| GcpE [Solanum lycopersicum]
gi|27462474|gb|AAO15447.1|AF435086_1 GcpE [Solanum lycopersicum]
Length = 740
Score = 1347 bits (3485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/741 (87%), Positives = 696/741 (93%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MA GT+PASF GLKS ++GLGFAKS++F+RV D ++ K R +F+VIRN+ N + EL
Sbjct: 1 MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNA-NPGQETIEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCESI+KTVRR+T TVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSPLLVPRQKYCESIYKTVRRQTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD GAD+VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADAGADIVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A+LG RAA LQQGVAPFEEKHR YFDFQRRSG+LP QKEG+EVDYRGVLHRDGSVLMSVS
Sbjct: 360 ADLGKRAAALQQGVAPFEEKHRRYFDFQRRSGELPAQKEGDEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
L+QLK PELLY+SLAAKL+VGMPFKDLATVDSILLRELP +DD D+RLALKRLVDISMGV
Sbjct: 420 LNQLKTPELLYRSLAAKLIVGMPFKDLATVDSILLRELPPLDDIDSRLALKRLVDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLV L+ELS GA+KLLPEGTRLVVSLRGDES++ELEILK D T
Sbjct: 480 IAPLSEQLTKPLPNAMVLVTLKELSGGAHKLLPEGTRLVVSLRGDESHDELEILKSSDVT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILH+LP+ E+KIGRVQAARRLFEYLSEN+LNFPVIHHIQFP+ HRDDLVIGAGTN GA
Sbjct: 540 MILHNLPYTEEKIGRVQAARRLFEYLSENSLNFPVIHHIQFPSNTHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDGLLLEAP +DFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGLLLEAPDKDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR I ME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRAIEMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDH RW +PP EE
Sbjct: 720 TDALIQLIKDHDRWVDPPTEE 740
>gi|30697397|ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|27462472|gb|AAO15446.1|AF434673_1 GcpE [Arabidopsis thaliana]
gi|332009971|gb|AED97354.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 740
Score = 1345 bits (3480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/741 (86%), Positives = 694/741 (93%), Gaps = 2/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQG APFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQG-APFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 418
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 419 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 478
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 479 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 538
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 539 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 598
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 599 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 658
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +A
Sbjct: 659 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEA 718
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALI LIK+HGRW +PP +
Sbjct: 719 TDALIGLIKEHGRWVDPPVAD 739
>gi|322518146|gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase [Rauvolfia
verticillata]
Length = 740
Score = 1344 bits (3478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/741 (86%), Positives = 698/741 (94%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGT+PASF GLKS ++GLGFAKS+DFVRV D R+ K R + +VI+NS N + EL
Sbjct: 1 MATGTVPASFTGLKSGENGLGFAKSIDFVRVSDLRRVKFLRAKVSVIKNS-NPGPETLEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVP QKYCES+HKTVRRKTRTVMVG VA+GS+HPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSQLLVPVQKYCESVHKTVRRKTRTVMVGKVALGSDHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD+GAD+VRITVQGK+EADAC++IKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADKGADIVRITVQGKKEADACYDIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT++EYQKEL+HIE++F+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTNEEYQKELEHIEQIFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSY+GDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV+AYRLLVAEM
Sbjct: 240 GSLSDRIMSYHGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVEAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 FVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG RAAELQQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGARAAELQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP V+D DARLALKRL+DISMGV
Sbjct: 420 LDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVEDQDARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
+TPLSEQLTKPL +A+VLV L+ELS+GA+KLLPEGTRL VS+RGDE EEL+ILK +DAT
Sbjct: 480 VTPLSEQLTKPLLNAIVLVTLKELSSGAHKLLPEGTRLAVSVRGDEPNEELDILKSLDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KIGRV AARRLFEYLSEN+LNFPVIHH+QFP GIHRDDLVI AG+N GA
Sbjct: 540 MILHDLPHTEEKIGRVHAARRLFEYLSENSLNFPVIHHMQFPKGIHRDDLVIRAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDF+FLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI ME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGINMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PPAEE
Sbjct: 720 TDALIQLIKDHGRWVDPPAEE 740
>gi|27903511|gb|AAO24774.1| GCPE protein [Catharanthus roseus]
Length = 740
Score = 1340 bits (3468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/741 (86%), Positives = 699/741 (94%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGT+PASF GLKSR++GLGFAKS+DFV+V D R+ K R + +VI+NS N + EL
Sbjct: 1 MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAKVSVIKNS-NPGPETVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GS LLVP QKYCESIHKTVRRKTRTVMVGNVA+GS+HPIR+QTMTT DTKDVA T
Sbjct: 60 QPASQGSQLLVPVQKYCESIHKTVRRKTRTVMVGNVALGSDHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM IAD+GAD+VRITVQGK+EADAC++IKN+LVQK+YNIPLVADIHFAP+VALRVAE
Sbjct: 120 VEQVMGIADKGADIVRITVQGKKEADACYDIKNTLVQKSYNIPLVADIHFAPAVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYTD+EYQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTDEEYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV AYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVAAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG RAA+L QGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGARAADLGQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP ++D D+RLALKRL+DISMGV
Sbjct: 420 LDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPIEDKDSRLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AMVLV L+ELS+GA+KLLPEGTRLVVS+RGDE YEEL+ILK++D T
Sbjct: 480 ITPLSEQLTKPLPNAMVLVTLKELSSGAHKLLPEGTRLVVSVRGDEPYEELDILKNVDVT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILH+LP E+KIGRV AARRLFEYLSEN+LNFPVIHH+QF N IHRDDLVIGAG++ GA
Sbjct: 540 MILHNLPHTEEKIGRVHAARRLFEYLSENSLNFPVIHHMQFANAIHRDDLVIGAGSDAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEA QDF+FLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAHDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI ME A
Sbjct: 660 QIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEHA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKDHGRW +PPAE+
Sbjct: 720 TDALIQLIKDHGRWVDPPAED 740
>gi|449524150|ref|XP_004169086.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 767
Score = 1339 bits (3465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/766 (84%), Positives = 699/766 (91%), Gaps = 27/766 (3%)
Query: 2 ATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQ 61
+ GTLP+ G K + LGF+K ++ V+V D + KS R+ +IRNS N SDIAELQ
Sbjct: 3 SAGTLPSHLSGWKGGNVNLGFSKRLESVKVFDLKSPKSRGRKVLIIRNS-NPGSDIAELQ 61
Query: 62 PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTV 121
PASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGTV
Sbjct: 62 PASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTV 121
Query: 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181
E+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAEC
Sbjct: 122 EQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC 181
Query: 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241
FDKIRVNPGNFADRRAQFEQLEYT+++YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNHG
Sbjct: 182 FDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG 241
Query: 242 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
SLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMY
Sbjct: 242 SLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 301
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLA
Sbjct: 302 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 361
Query: 362 NLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+AAELQQGV P+EEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL+SVSL
Sbjct: 362 TLGMKAAELQQGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLISVSL 421
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDD DARLALKRL+DISMGVI
Sbjct: 422 DQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDISMGVI 481
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
TPLSEQLTKPLP+AMVLVNL+ELS+GAYKLLP+GTRLVVS+RGDESY +L+ILK+ DATM
Sbjct: 482 TPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPDGTRLVVSVRGDESYNDLDILKETDATM 541
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ HDLP++EDK+ RV AARRLFEYLSEN L FPVIHHIQFPNG+HRDDLVIGAG+N GAL
Sbjct: 542 LFHDLPYSEDKVSRVHAARRLFEYLSENGLTFPVIHHIQFPNGVHRDDLVIGAGSNAGAL 601
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTK---------------------- 639
LVDGLGDG+LLEAP +DFDF+R+TSFNLLQGCRMRNTK
Sbjct: 602 LVDGLGDGVLLEAPDKDFDFIRNTSFNLLQGCRMRNTKPHSKQVLRVFLTKLQLFSITFL 661
Query: 640 ----TEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYV 695
EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYV
Sbjct: 662 HTSLQEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYV 721
Query: 696 GGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
GG+PGKIDLYVGKTVVKRGIAME AT+ALIQLIKD+GRWAEPP EE
Sbjct: 722 GGSPGKIDLYVGKTVVKRGIAMENATEALIQLIKDNGRWAEPPTEE 767
>gi|112258871|gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia
rebaudiana]
Length = 740
Score = 1332 bits (3448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/741 (85%), Positives = 692/741 (93%), Gaps = 1/741 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG P SF LK R++GLGFAK+ DFV+V D ++ K R + V +NS S SDIAE
Sbjct: 1 MATGAAPTSFMSLKGRENGLGFAKTSDFVKVSDLKRVKFHRTKIFVPKNS-KSGSDIAEF 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
+PASEGSPLLVP QKYCES HKT+RRKTRTVMVG+VA+GS+HPIR+QTMTT+DTKDVA T
Sbjct: 60 KPASEGSPLLVPVQKYCESTHKTLRRKTRTVMVGDVALGSDHPIRIQTMTTSDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GADLVRITVQGKREADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMQIADRGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYTDD+YQKEL+HIE+VF PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVFVPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+L
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSV MSV+
Sbjct: 360 ANLGMKASQIQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVPMSVT 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
L+QLK PEL YKSLAAKLV+GMPFKDLATVDSI LRELP VDD DARLALKRL+D+SMGV
Sbjct: 420 LEQLKKPELFYKSLAAKLVLGMPFKDLATVDSIFLRELPPVDDKDARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+A+VLVNL ELSTGA+KLLPEGTRLVVSLRGDE YEELE+LK IDAT
Sbjct: 480 ITPLSEQLTKPLPNAIVLVNLNELSTGAHKLLPEGTRLVVSLRGDEPYEELEVLKSIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP++E+K GRV AARRLFEYLSEN+LNFPV+HHI FP G+ RD+LVI AG N GA
Sbjct: 540 MILHDLPYSEEKTGRVHAARRLFEYLSENSLNFPVLHHITFPKGVPRDELVINAGANAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG+LL+AP QDF+F+R+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ ISA
Sbjct: 600 LLVDGLGDGILLDAPDQDFEFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQVISA 659
Query: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQA 720
EIR+KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGIAME A
Sbjct: 660 EIRDKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAMENA 719
Query: 721 TDALIQLIKDHGRWAEPPAEE 741
TDALIQLIKD+GRW +PP EE
Sbjct: 720 TDALIQLIKDNGRWVDPPVEE 740
>gi|255578864|ref|XP_002530286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Ricinus communis]
gi|223530184|gb|EEF32093.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Ricinus communis]
Length = 716
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/711 (89%), Positives = 677/711 (95%), Gaps = 1/711 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSG-RRRFTVIRNSSNSSSDIAE 59
MATG +P SF GLK+R+S LGF KS+DFVR+CD ++ KSG R+R ++IRNSSN ++ E
Sbjct: 1 MATGAVPTSFTGLKTRESNLGFGKSMDFVRICDLKRIKSGGRKRISMIRNSSNPGPEMVE 60
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
LQPAS GSPLLVPRQKYCES HKTVRRKTRTVMVGNVA+GS+HPIRVQTMTT+DTK+VA
Sbjct: 61 LQPASPGSPLLVPRQKYCESTHKTVRRKTRTVMVGNVALGSDHPIRVQTMTTSDTKNVAA 120
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVEEVMRIAD+GADLVRITVQGKREADACF+IKNSLVQKNYNIPLVADIHFAPSVALR+A
Sbjct: 121 TVEEVMRIADKGADLVRITVQGKREADACFDIKNSLVQKNYNIPLVADIHFAPSVALRIA 180
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFE+LEYT+D+YQ EL+HIE+VF+PLVEKCKKYGRA+RIGTN
Sbjct: 181 ECFDKIRVNPGNFADRRAQFEKLEYTEDDYQIELEHIEQVFTPLVEKCKKYGRAMRIGTN 240
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 241 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAE 300
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
MYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR
Sbjct: 301 MYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 360
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGMRA+ +QQGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSV
Sbjct: 361 LANLGMRASAVQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMSV 420
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP +D DARLALKRL+DISMG
Sbjct: 421 SLDQLKVPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPAEDSDARLALKRLIDISMG 480
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+AMVLVNL+ELSTGA+KLLPEGTRLVVS+RGDE YEELEILK IDA
Sbjct: 481 VITPLSEQLTKPLPNAMVLVNLKELSTGAHKLLPEGTRLVVSVRGDEPYEELEILKQIDA 540
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TMILHDLP EDKIGRV AARRLFE+LS+N+LNFPVIHHI FPNGIHRDDLVIGAG N G
Sbjct: 541 TMILHDLPNTEDKIGRVHAARRLFEFLSDNSLNFPVIHHINFPNGIHRDDLVIGAGANAG 600
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
ALLVDGLGDG+LLEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS
Sbjct: 601 ALLVDGLGDGILLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 660
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK V
Sbjct: 661 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKRV 711
>gi|9759324|dbj|BAB09833.1| GcpE protein [Arabidopsis thaliana]
Length = 716
Score = 1323 bits (3423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/716 (87%), Positives = 678/716 (94%), Gaps = 1/716 (0%)
Query: 26 VDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVR 85
++ VR+CD R +S RRR +VIRNS N SD+AELQPASEGSPLLVPRQKYCES+HKTVR
Sbjct: 1 MNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAELQPASEGSPLLVPRQKYCESLHKTVR 59
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GTV+EVMRIAD+GAD+VRITVQGK+EA
Sbjct: 60 RKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVDEVMRIADKGADIVRITVQGKKEA 119
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
DACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFADRRAQFE ++YT
Sbjct: 120 DACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFETIDYT 179
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEF
Sbjct: 180 EDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 239
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
ARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK
Sbjct: 240 ARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 299
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYF 385
SAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLANLG +AA+LQQGVAPFEEKHRHYF
Sbjct: 300 SAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLANLGTKAAKLQQGVAPFEEKHRHYF 359
Query: 386 DFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFK 445
DFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLDQLKAPELLY+SLA KLVVGMPFK
Sbjct: 360 DFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLDQLKAPELLYRSLATKLVVGMPFK 419
Query: 446 DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELS 505
DLATVDSILLRELP VDD ARLALKRL+D+SMGVI PLSEQLTKPLP+AMVLVNL+ELS
Sbjct: 420 DLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIAPLSEQLTKPLPNAMVLVNLKELS 479
Query: 506 TGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEY 565
GAYKLLPEGTRLVVSLRGDE YEELEILK+IDATMILHD+PF EDK+ RV AARRLFE+
Sbjct: 480 GGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMILHDVPFTEDKVSRVHAARRLFEF 539
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
LSEN++NFPVIHHI FP GIHRD+LVI AGT G LLVDGLGDG++LEAP QDFDFLR+T
Sbjct: 540 LSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLLVDGLGDGVMLEAPDQDFDFLRNT 599
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 685
SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 600 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 659
Query: 686 EMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
EMADADFGYVGG+PGKIDLYVGKTVVKRGIAM +ATDALI LIK+HGRW +PP +
Sbjct: 660 EMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEATDALIGLIKEHGRWVDPPVAD 715
>gi|82492440|gb|ABB78087.1| (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase [Ginkgo
biloba]
Length = 741
Score = 1301 bits (3367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/744 (83%), Positives = 686/744 (92%), Gaps = 6/744 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFV---RVCDFRKFKSGRRRFTVIRNSSNSSSDI 57
MA GT+PASF GLK DS G + ++ R+ + + +S R+R V+RNSS SDI
Sbjct: 1 MAAGTIPASFSGLKQTDSLPGCLEKINSTKNFRISNCQTSRSCRKRLNVVRNSS---SDI 57
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
AE+Q ASEGSPLLVPRQKYCESI+KTVRR+TRT+M GNVA+GSEHPIR+QTMTT DTKDV
Sbjct: 58 AEMQRASEGSPLLVPRQKYCESIYKTVRRRTRTMMAGNVALGSEHPIRIQTMTTTDTKDV 117
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
+ TVE+VMRIAD+GADLVRITVQGK+EADAC++IKN+LVQK+YNIPLVADIHFAPSVA+R
Sbjct: 118 SATVEQVMRIADRGADLVRITVQGKKEADACYDIKNTLVQKDYNIPLVADIHFAPSVAMR 177
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQF++LEYT+++YQKEL+HIEEVF PLVEKCKKYGRA+RIG
Sbjct: 178 VAECFDKIRVNPGNFADRRAQFQKLEYTEEDYQKELEHIEEVFGPLVEKCKKYGRAMRIG 237
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESAFEFARIC+KLDFHNF+FSMKASNPVVMVQAYRLLV
Sbjct: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICQKLDFHNFVFSMKASNPVVMVQAYRLLV 297
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPC
Sbjct: 298 AEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPC 357
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLGM+AA+LQ+GVAPFEEKHR+YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 358 RRLANLGMQAAKLQKGVAPFEEKHRYYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLM 417
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLK PELLYKSLA KL+VGMPFKDLATVD+ILLRELP VDD +ARLA+KRLVD+S
Sbjct: 418 SVSLDQLKTPELLYKSLATKLIVGMPFKDLATVDTILLRELPPVDDSEARLAIKRLVDVS 477
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLT+PL HAMVLVNL+ELSTGA++LLP GTRL VSLRGDE+YE+L++LK +
Sbjct: 478 MGVLTPLSEQLTRPLQHAMVLVNLKELSTGAHELLPAGTRLAVSLRGDEAYEDLDLLKSV 537
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D TMIL +LP E KI RV A+RRLFEYL E LNFPVIHH++FP G HRDDLVI AG+
Sbjct: 538 DLTMILLNLPQTEKKISRVHASRRLFEYLQETGLNFPVIHHLEFPAGTHRDDLVINAGSE 597
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
GALLVDGLGDGLLLEAP QDFDFLR+TSF LLQGCRMRNTKTEYVSCPSCGRTLFDLQE
Sbjct: 598 AGALLVDGLGDGLLLEAPDQDFDFLRNTSFGLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
Query: 658 ISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAM 717
ISAEIREKT+HLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGK VVKRGIAM
Sbjct: 658 ISAEIREKTAHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKEVVKRGIAM 717
Query: 718 EQATDALIQLIKDHGRWAEPPAEE 741
+QATDALIQLIKDHGRW +PP EE
Sbjct: 718 DQATDALIQLIKDHGRWVDPPVEE 741
>gi|357453897|ref|XP_003597229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
gi|355486277|gb|AES67480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
Length = 731
Score = 1300 bits (3365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/732 (85%), Positives = 675/732 (92%), Gaps = 28/732 (3%)
Query: 37 FKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNV 96
KS RR+ ++IRNS N S DIAELQPAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V
Sbjct: 1 MKSSRRKVSIIRNS-NPSQDIAELQPASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDV 59
Query: 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLV 156
IGS+HPIR+QTMTT DTKDVAGTVE+VM+IAD+GAD+VRITVQGK+EADACFEIKNSLV
Sbjct: 60 TIGSDHPIRIQTMTTTDTKDVAGTVEQVMKIADKGADIVRITVQGKKEADACFEIKNSLV 119
Query: 157 QKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHI 216
QKNYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFADRRAQFE LEYT+D+YQKEL+HI
Sbjct: 120 QKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHI 179
Query: 217 EEV---------------------------FSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
E+V F+PLVEKCKKYGRA+RIGTNHGSLSDRIMS
Sbjct: 180 EQVKPPPLVLYLKFLSRARICSFVNTSVRVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMS 239
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMYV GWDYPL
Sbjct: 240 YYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPL 299
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPC RLANLG RAAE
Sbjct: 300 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCTRLANLGTRAAE 359
Query: 370 LQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
LQ+GVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSVSL+QLK PEL
Sbjct: 360 LQKGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGTLHRDGSVLMSVSLEQLKTPEL 419
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
LYKSL+AKL+VGMPFKDLATVDSILLRELP VDD DARLALKRL DISMGVITPLSEQLT
Sbjct: 420 LYKSLSAKLIVGMPFKDLATVDSILLRELPPVDDVDARLALKRLNDISMGVITPLSEQLT 479
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFN 549
KPLP+A+VLVNL+ELSTGA+KLLP+GTRLVVS+RGDE YEELEILKD+DATM+LHDLP+
Sbjct: 480 KPLPNAIVLVNLKELSTGAHKLLPQGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYT 539
Query: 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
ED+I RV AARRLFEYLS+N+L+FPVIHHIQFPNGIHRDDLVIGAG++ GALLVDGLGDG
Sbjct: 540 EDRISRVHAARRLFEYLSDNSLDFPVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDG 599
Query: 610 LLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 669
LLLEA +DFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL
Sbjct: 600 LLLEASDKDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 659
Query: 670 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR IAMEQATDALI LIK
Sbjct: 660 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRAIAMEQATDALIDLIK 719
Query: 730 DHGRWAEPPAEE 741
+HGRW +PP EE
Sbjct: 720 EHGRWVDPPVEE 731
>gi|115447171|ref|NP_001047365.1| Os02g0603800 [Oryza sativa Japonica Group]
gi|75261413|sp|Q6K8J4.1|ISPG_ORYSJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic; AltName:
Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase; Flags: Precursor
gi|47497312|dbj|BAD19354.1| putative GCPE protein [Oryza sativa Japonica Group]
gi|113536896|dbj|BAF09279.1| Os02g0603800 [Oryza sativa Japonica Group]
gi|215767934|dbj|BAH00163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191125|gb|EEC73552.1| hypothetical protein OsI_07973 [Oryza sativa Indica Group]
gi|222623195|gb|EEE57327.1| hypothetical protein OsJ_07430 [Oryza sativa Japonica Group]
Length = 744
Score = 1294 bits (3349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/745 (83%), Positives = 682/745 (91%), Gaps = 5/745 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDF---RKFKSGRRRFTVIRNSSNSSSDI 57
MATG PA P ++ RD G+GF +SVDF ++ + S R R V ++SS + SD
Sbjct: 1 MATGVAPAPLPHVRVRDGGIGFTRSVDFAKILSVPATLRVGSSRGRVLVAKSSS-TGSDT 59
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
EL+P+SEGSPLLVPRQKYCESI++T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKDV
Sbjct: 60 MELEPSSEGSPLLVPRQKYCESIYETRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKDV 119
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
A TVEEVMRIAD+GAD VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VALR
Sbjct: 120 AKTVEEVMRIADKGADFVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALR 179
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIE+VFSPLVEKCK+YGRA+RIG
Sbjct: 180 VAECFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEKVFSPLVEKCKQYGRAMRIG 239
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRLLV
Sbjct: 240 TNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLV 299
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPC
Sbjct: 300 AEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPC 359
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLG AA+LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 360 RRLANLGTHAADLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRGVLHRDGSVLM 419
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLKAPELLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDIS
Sbjct: 420 SVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDIS 479
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLTKPLPHA+ LVN+ ELS+GA+KLLPEGTRL V+LRGDESYE+L++LK +
Sbjct: 480 MGVLTPLSEQLTKPLPHAIALVNVDELSSGAHKLLPEGTRLAVTLRGDESYEQLDLLKGV 539
Query: 538 -DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
D TM+LH +P+ E+K GRV AARRLFEYL N LNFPVIHHI+FP ++RDDLVIGAG
Sbjct: 540 DDITMLLHSVPYGEEKTGRVHAARRLFEYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGA 599
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ
Sbjct: 600 NVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 659
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
E+SA+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGIA
Sbjct: 660 EVSAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIA 719
Query: 717 MEQATDALIQLIKDHGRWAEPPAEE 741
ME ATDALIQLIKDHGRW +PP EE
Sbjct: 720 MEGATDALIQLIKDHGRWVDPPVEE 744
>gi|242065696|ref|XP_002454137.1| hypothetical protein SORBIDRAFT_04g025290 [Sorghum bicolor]
gi|241933968|gb|EES07113.1| hypothetical protein SORBIDRAFT_04g025290 [Sorghum bicolor]
Length = 746
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/746 (83%), Positives = 683/746 (91%), Gaps = 5/746 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGR----RRFTVIRNSSNSSSD 56
MATG PAS P ++ RD G+GF +SVDF +V + R R ++ SS++ S+
Sbjct: 1 MATGVAPASLPHVRVRDGGVGFTRSVDFAKVLSTPSAGTMRTSSSRGRALVAKSSSTGSE 60
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
EL+P+SEGSPLLVPRQKYCESIH+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKD
Sbjct: 61 TVELEPSSEGSPLLVPRQKYCESIHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKD 120
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL 176
VA TVEEVMRIAD+GAD+VRITVQG++EADACFEIK++LVQKNYNIPLVADIHFAP+VAL
Sbjct: 121 VAKTVEEVMRIADKGADIVRITVQGRKEADACFEIKDTLVQKNYNIPLVADIHFAPTVAL 180
Query: 177 RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236
RVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+RI
Sbjct: 181 RVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMRI 240
Query: 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLL 296
GTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLD+HNF+FSMKASNPVVMVQAYRLL
Sbjct: 241 GTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDYHNFVFSMKASNPVVMVQAYRLL 300
Query: 297 VAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP 356
VAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDP
Sbjct: 301 VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP 360
Query: 357 CRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL 416
C+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSVL
Sbjct: 361 CQRLANLGAQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL 420
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
MSVSLDQLKAPELLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVDI
Sbjct: 421 MSVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI 480
Query: 477 SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKD 536
MGV+TPLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILKD
Sbjct: 481 GMGVLTPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILKD 540
Query: 537 I-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
+ D TM+LH++P+ E+K GRV AARRLFEYL + LNFPVIHHI FP I RD LVIGAG
Sbjct: 541 VDDITMLLHNVPYGEEKTGRVHAARRLFEYLQASGLNFPVIHHIDFPKAIDRDGLVIGAG 600
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL
Sbjct: 601 ANVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 660
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGI
Sbjct: 661 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGI 720
Query: 716 AMEQATDALIQLIKDHGRWAEPPAEE 741
AME ATDALIQLIKD+GRW +PPAEE
Sbjct: 721 AMEGATDALIQLIKDNGRWVDPPAEE 746
>gi|189017048|gb|ACD70401.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase [Populus trichocarpa]
Length = 680
Score = 1291 bits (3340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/679 (90%), Positives = 655/679 (96%)
Query: 63 ASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVE 122
ASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNV +GSEHPIR+QTMTT DTKDVA TVE
Sbjct: 1 ASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVPLGSEHPIRIQTMTTTDTKDVAATVE 60
Query: 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF 182
+VM IAD+GAD+VR+TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV+ECF
Sbjct: 61 QVMIIADKGADIVRLTVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVSECF 120
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNHGS
Sbjct: 121 DKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTNHGS 180
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEMYV
Sbjct: 181 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYV 240
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+LAN
Sbjct: 241 QGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKLAN 300
Query: 363 LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLD 422
LGMRAA++QQGVAPF+EK+R YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVSLD
Sbjct: 301 LGMRAAKIQQGVAPFKEKYRRYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 360
Query: 423 QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVIT 482
QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELP VDD+D RLALKRL+++SMGVI
Sbjct: 361 QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVDDNDVRLALKRLIEVSMGVIA 420
Query: 483 PLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMI 542
PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVVSLRGDE YEELEILK IDATM+
Sbjct: 421 PLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPYEELEILKHIDATML 480
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LHDLPF+EDKIGRV ARRLFEYL+EN LN PVIHH+QFP GIHRD+LVIGAGTN GALL
Sbjct: 481 LHDLPFSEDKIGRVHTARRLFEYLAENALNVPVIHHLQFPKGIHRDELVIGAGTNAGALL 540
Query: 603 VDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 662
VDGLGDG+L+EAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA+I
Sbjct: 541 VDGLGDGVLIEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQI 600
Query: 663 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATD 722
REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI ME ATD
Sbjct: 601 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIEMESATD 660
Query: 723 ALIQLIKDHGRWAEPPAEE 741
ALIQLIKD+GRW +PP E
Sbjct: 661 ALIQLIKDNGRWVDPPPAE 679
>gi|357150005|ref|XP_003575307.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Brachypodium distachyon]
Length = 744
Score = 1286 bits (3328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/745 (83%), Positives = 676/745 (90%), Gaps = 5/745 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDF---RKFKSGRRRFTVIRNSSNSSSDI 57
MATG PA P ++ RD G+GF +SVDF +V + S R R V+R+SS + SD
Sbjct: 1 MATGVAPAPLPHVRVRDGGIGFTRSVDFAKVLSVPAVLRTGSSRGRGLVVRSSS-TESDT 59
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
EL+PASEGSPLLVPRQKYCESIH+T RRKTRTVMVGNVA+GS+HPIR+QTMTT+DTKDV
Sbjct: 60 IELEPASEGSPLLVPRQKYCESIHQTRRRKTRTVMVGNVAMGSDHPIRIQTMTTSDTKDV 119
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
TVEEVMRIAD+GAD VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAP+VALR
Sbjct: 120 TKTVEEVMRIADKGADFVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPAVALR 179
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQFE+LEYT+D+Y+KEL+HIE+VFSPLVEKCKKYGRA+RIG
Sbjct: 180 VAECFDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIEKVFSPLVEKCKKYGRAMRIG 239
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESA EFARICR LDFHNF+FSMKASNPVVMVQAYRLLV
Sbjct: 240 TNHGSLSDRIMSYYGDSPRGMVESALEFARICRNLDFHNFVFSMKASNPVVMVQAYRLLV 299
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPC
Sbjct: 300 AEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPC 359
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHRDGSVLM
Sbjct: 360 RRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGETVDYRGVLHRDGSVLM 419
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLKAPELLY+SL+AKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDIS
Sbjct: 420 SVSLDQLKAPELLYRSLSAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDIS 479
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLTKPLPHA+VL+NL ELS+ A LLPEGTR V+LRGDESYE+L +LK +
Sbjct: 480 MGVLTPLSEQLTKPLPHAIVLLNLDELSSDAKNLLPEGTRFAVTLRGDESYEQLNVLKSV 539
Query: 538 -DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGAG+
Sbjct: 540 DDITMLLHNVPYGEEKTGRVHAARRLFEYLETNGLNFPVIHHIDFPKSIDRDGLVIGAGS 599
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ
Sbjct: 600 NVGALLVDGLGDGVLLEATNQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 659
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
EISA+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGIA
Sbjct: 660 EISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIA 719
Query: 717 MEQATDALIQLIKDHGRWAEPPAEE 741
ME AT+ALIQLIKDHGRW +PP EE
Sbjct: 720 MEGATEALIQLIKDHGRWVDPPVEE 744
>gi|219886555|gb|ACL53652.1| unknown [Zea mays]
gi|413937662|gb|AFW72213.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 746
Score = 1284 bits (3323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/747 (83%), Positives = 678/747 (90%), Gaps = 7/747 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCD-----FRKFKSGRRRFTVIRNSSNSSS 55
MATG PA P ++ G+GF +SVDF +V + S R R ++ SS++ S
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRASSSRGR-ALVAKSSSTGS 59
Query: 56 DIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTK 115
+ EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTK
Sbjct: 60 ETMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTK 119
Query: 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVA 175
DVA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VA
Sbjct: 120 DVAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVA 179
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
LRVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+R
Sbjct: 180 LRVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMR 239
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IGTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRL
Sbjct: 240 IGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRL 299
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
LVAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EID
Sbjct: 300 LVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEID 359
Query: 356 PCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSV 415
PC+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSV
Sbjct: 360 PCQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSV 419
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
LMSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVD
Sbjct: 420 LMSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVD 479
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
ISMGV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILK
Sbjct: 480 ISMGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILK 539
Query: 536 DI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
D+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGA
Sbjct: 540 DVDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGA 599
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
G NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD
Sbjct: 600 GANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 659
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+R
Sbjct: 660 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRA 719
Query: 715 IAMEQATDALIQLIKDHGRWAEPPAEE 741
IAME ATDALIQLIKDHGRW +PPAEE
Sbjct: 720 IAMEGATDALIQLIKDHGRWVDPPAEE 746
>gi|162458306|ref|NP_001105676.1| LOC542690 [Zea mays]
gi|50082771|gb|AAT70081.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
gi|50082773|gb|AAT70082.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 746
Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/746 (82%), Positives = 675/746 (90%), Gaps = 5/746 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGR----RRFTVIRNSSNSSSD 56
MATG PA P ++ G+GF +SVDF +V + R R ++ SS++ S+
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRAGSSRGRALVAKSSSTGSE 60
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKD
Sbjct: 61 TMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKD 120
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL 176
VA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VAL
Sbjct: 121 VAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVAL 180
Query: 177 RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236
RVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+RI
Sbjct: 181 RVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMRI 240
Query: 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLL 296
GTN GSLSDRIMSYYGDSPRGMVESA EFARICR+LDFHNF+FSMKASNPV+MVQAYRLL
Sbjct: 241 GTNSGSLSDRIMSYYGDSPRGMVESALEFARICRRLDFHNFVFSMKASNPVIMVQAYRLL 300
Query: 297 VAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP 356
VAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDP
Sbjct: 301 VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP 360
Query: 357 CRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL 416
C+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSVL
Sbjct: 361 CQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL 420
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
MSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVDI
Sbjct: 421 MSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI 480
Query: 477 SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKD 536
S+GV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILKD
Sbjct: 481 SVGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILKD 540
Query: 537 I-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGAG
Sbjct: 541 VDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGAG 600
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQGCRMRN KTEYVSCPSCGRTLFDL
Sbjct: 601 ANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQGCRMRNAKTEYVSCPSCGRTLFDL 660
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+R I
Sbjct: 661 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRAI 720
Query: 716 AMEQATDALIQLIKDHGRWAEPPAEE 741
AME ATDALIQLIKDHGRW +PPAEE
Sbjct: 721 AMEGATDALIQLIKDHGRWVDPPAEE 746
>gi|195655961|gb|ACG47448.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 745
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/747 (82%), Positives = 674/747 (90%), Gaps = 8/747 (1%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCD-----FRKFKSGRRRFTVIRNSSNSSS 55
MATG PA P ++ G+GF +SVDF +V + S R R ++ SS++ S
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRASSSRGR-ALVAKSSSTGS 59
Query: 56 DIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTK 115
+ EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTK
Sbjct: 60 ETMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTK 119
Query: 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVA 175
DVA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIH + +
Sbjct: 120 DVAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHCSYG-S 178
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
LRVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+R
Sbjct: 179 LRVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMR 238
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IGTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRL
Sbjct: 239 IGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRL 298
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
LVAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EID
Sbjct: 299 LVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEID 358
Query: 356 PCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSV 415
PC+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSV
Sbjct: 359 PCQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSV 418
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
LMSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVD
Sbjct: 419 LMSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVD 478
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
ISMGV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILK
Sbjct: 479 ISMGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILK 538
Query: 536 DI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
D+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGA
Sbjct: 539 DVDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGA 598
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
G NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD
Sbjct: 599 GANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 658
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+R
Sbjct: 659 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRA 718
Query: 715 IAMEQATDALIQLIKDHGRWAEPPAEE 741
IAME ATDALIQLIKDHGRW +PPAEE
Sbjct: 719 IAMEGATDALIQLIKDHGRWVDPPAEE 745
>gi|186532618|ref|NP_001119467.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|332009972|gb|AED97355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 717
Score = 1226 bits (3172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/674 (86%), Positives = 633/674 (93%), Gaps = 1/674 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 659
Query: 661 EIREKTSHLPGVSI 674
EIREKTSHLPGVS+
Sbjct: 660 EIREKTSHLPGVSV 673
>gi|302783400|ref|XP_002973473.1| hypothetical protein SELMODRAFT_149035 [Selaginella moellendorffii]
gi|300159226|gb|EFJ25847.1| hypothetical protein SELMODRAFT_149035 [Selaginella moellendorffii]
Length = 690
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/686 (79%), Positives = 620/686 (90%), Gaps = 4/686 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ D+ E++PAS+ SPLLVPRQKYCES+HKT+RR+T TVMVGNVA+GSEHPIRVQTMTT D
Sbjct: 2 AQDVVEMEPASQNSPLLVPRQKYCESVHKTIRRQTSTVMVGNVAVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTV++VM+IAD+GAD+VRITVQGK+EAD C+EIKN+LV+K Y+IPLVADIHFAPS
Sbjct: 62 TKDVLGTVDQVMKIADRGADIVRITVQGKKEADCCYEIKNTLVKKGYSIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
VALRVAECFDKIR+NPGNFADRRAQFE LEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA
Sbjct: 122 VALRVAECFDKIRINPGNFADRRAQFETLEYTEDDYQKELEHIEAVFTPLVEKCKKYGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDR MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY
Sbjct: 182 IRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLVAEMYV+GW+YPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTEPPE+E
Sbjct: 242 RLLVAEMYVNGWNYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEPPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAP--FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHR 411
IDPC RLANLGMRA+ LQ G AP FEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHR
Sbjct: 302 IDPCTRLANLGMRASSLQLG-APEQFEEKHRRYFDFQRRSGQLPLQKEGESVDYRGVLHR 360
Query: 412 DGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALK 471
DGSVLMSVSLDQLK E Y+SLA KL++GMP+KD+ATVDSILL+ELP++DD +RL LK
Sbjct: 361 DGSVLMSVSLDQLKNAEQFYRSLATKLIIGMPYKDVATVDSILLKELPALDDKASRLTLK 420
Query: 472 RLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL 531
RLVDISMG++TPLS+QL +PLPHA+ LV L+EL++GA+ LP+G+R+ V + G+E E L
Sbjct: 421 RLVDISMGILTPLSQQLERPLPHAIALVTLEELASGAHNQLPQGSRIAVIVHGNEPSELL 480
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
E+LK +DA M+L + P +E+ + V ARRL EYL N+L+FPVIH+++F G+ RDD V
Sbjct: 481 ELLKTVDAVMLLLNSP-HEETVSHVHNARRLLEYLQSNSLSFPVIHNLEFKQGLRRDDFV 539
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I AG+ GALLVDGLGDG+LL+A QDFDF+R TSF LLQGCRMRNTKTEYVSCPSCGRT
Sbjct: 540 IKAGSEAGALLVDGLGDGILLDAADQDFDFVRSTSFGLLQGCRMRNTKTEYVSCPSCGRT 599
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDLQ++SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV
Sbjct: 600 LFDLQDVSAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKQVV 659
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
KRGIA +QATDALIQLIKDHGRW +P
Sbjct: 660 KRGIAKDQATDALIQLIKDHGRWVDP 685
>gi|302809982|ref|XP_002986683.1| hypothetical protein SELMODRAFT_158184 [Selaginella moellendorffii]
gi|300145571|gb|EFJ12246.1| hypothetical protein SELMODRAFT_158184 [Selaginella moellendorffii]
Length = 690
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/686 (79%), Positives = 620/686 (90%), Gaps = 4/686 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ D+ E++PAS+ SPLLVPRQKYCES+HKT+RR+T TVMVGNVA+GSEHPIRVQTMTT D
Sbjct: 2 AQDVVEMEPASQNSPLLVPRQKYCESVHKTIRRQTSTVMVGNVAVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTV++VM+IAD+GAD+VRITVQGK+EAD C+EIKN+LV+K Y+IPLVADIHFAPS
Sbjct: 62 TKDVLGTVDQVMKIADRGADIVRITVQGKKEADCCYEIKNTLVKKGYSIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
VALRVAECFDKIR+NPGNFADRRAQFE LEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA
Sbjct: 122 VALRVAECFDKIRINPGNFADRRAQFETLEYTEDDYQKELEHIEAVFTPLVEKCKKYGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDR MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY
Sbjct: 182 IRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLVAEMYV+GW+YPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTEPPE+E
Sbjct: 242 RLLVAEMYVNGWNYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEPPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAP--FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHR 411
IDPC RLANLGMRA+ LQ G AP FEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHR
Sbjct: 302 IDPCTRLANLGMRASSLQLG-APEQFEEKHRRYFDFQRRSGQLPLQKEGESVDYRGVLHR 360
Query: 412 DGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALK 471
DGSVLMSVSLDQLK E Y+SLA KL++GMP+KD+ATVDSILL+ELP++DD +RL LK
Sbjct: 361 DGSVLMSVSLDQLKNAEQFYRSLATKLIIGMPYKDVATVDSILLKELPALDDKPSRLTLK 420
Query: 472 RLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL 531
RLVDISMG++TPLS+QL +PLPHA+ LV L+E+++GA+ LP+G+R+ V + G+E E L
Sbjct: 421 RLVDISMGILTPLSQQLERPLPHAIALVTLEEVASGAHNQLPQGSRIAVIVHGNEPSELL 480
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
E+LK +DA M+L + P +E+ + V ARRL EYL N+L+FPVIH+++F G+ RDD V
Sbjct: 481 ELLKTVDAVMLLLNSP-HEETVSHVHNARRLLEYLQSNSLSFPVIHNLEFKQGLRRDDFV 539
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I AG+ GALLVDGLGDG+LL+A QDFDF+R TSF LLQGCRMRNTKTEYVSCPSCGRT
Sbjct: 540 IKAGSEAGALLVDGLGDGILLDAADQDFDFVRSTSFGLLQGCRMRNTKTEYVSCPSCGRT 599
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDLQ++SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV
Sbjct: 600 LFDLQDVSAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKQVV 659
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
KRGIA +QATDALIQLIKDHGRW +P
Sbjct: 660 KRGIAKDQATDALIQLIKDHGRWVDP 685
>gi|254072126|gb|ACT64770.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Artemisia
annua]
Length = 617
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/617 (88%), Positives = 591/617 (95%)
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK 184
M+IAD+GAD+VRITVQGKREADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAECFDK
Sbjct: 1 MQIADRGADIVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDK 60
Query: 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244
IRVNPG+FADRRAQFEQLEYT+D+YQ+EL+HIE+VF+PLVEKCKKYGRA+RIGTNHGSLS
Sbjct: 61 IRVNPGDFADRRAQFEQLEYTEDDYQQELEHIEKVFTPLVEKCKKYGRAMRIGTNHGSLS 120
Query: 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG 304
DRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM V G
Sbjct: 121 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMNVQG 180
Query: 305 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+LANLG
Sbjct: 181 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKLANLG 240
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
M+A++LQQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSV+MSV+LDQL
Sbjct: 241 MKASQLQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVIMSVTLDQL 300
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
K PEL Y+SLAAKLV+GMPFKDLATVDSILLRELP DD DARLALKRL+D+SMG+ITPL
Sbjct: 301 KTPELFYRSLAAKLVLGMPFKDLATVDSILLRELPPADDKDARLALKRLIDVSMGIITPL 360
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
SEQLTKPLP+A+VLVNL ELSTGA+KLLPEGTRLVVS+RGDE YEEL+ILK DATMILH
Sbjct: 361 SEQLTKPLPNAIVLVNLNELSTGAHKLLPEGTRLVVSVRGDEPYEELDILKTTDATMILH 420
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
+LP+ E+K GRV AARRLFEYLSEN+LNFPV+HHI+FP GI RDDLVI AG N GALLVD
Sbjct: 421 ELPYAEEKTGRVHAARRLFEYLSENSLNFPVLHHIKFPKGIPRDDLVISAGANAGALLVD 480
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
GLGDG+LLEAP QDF+F+R+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ ISAEIRE
Sbjct: 481 GLGDGILLEAPDQDFEFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQVISAEIRE 540
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGIAME ATDAL
Sbjct: 541 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAMEGATDAL 600
Query: 725 IQLIKDHGRWAEPPAEE 741
IQLIKDHGRW +PP EE
Sbjct: 601 IQLIKDHGRWVDPPVEE 617
>gi|168006348|ref|XP_001755871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692801|gb|EDQ79156.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/688 (76%), Positives = 606/688 (88%), Gaps = 3/688 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ ++ E++PAS+GS LLVPRQKYCESIHK VRRKTRTV +G V +GSEHPIRVQTMTT D
Sbjct: 2 APEVVEMEPASQGSQLLVPRQKYCESIHKPVRRKTRTVSIGGVTVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTVE+VMRIAD+G D+VRITVQGK+EADAC+EIKN+LVQK YNIPLVADIHFAPS
Sbjct: 62 TKDVKGTVEQVMRIADRGCDIVRITVQGKKEADACYEIKNTLVQKGYNIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
+A++VA+CFDKIR+NPGNFADRRAQFE LEYT+ +YQ+EL+HIEEVF+PLVEKCKK GRA
Sbjct: 122 IAMKVADCFDKIRINPGNFADRRAQFEILEYTEADYQEELRHIEEVFTPLVEKCKKLGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK D+HNFLFSMKASNPVVMVQAY
Sbjct: 182 MRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKHDYHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLV+EMYV+ WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+E
Sbjct: 242 RLLVSEMYVNNWDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDG 413
IDPC +LANLGM+ + Q+GVA FEEKHR YFDFQRR+GQLP+Q+EGE VDYR VLHRDG
Sbjct: 302 IDPCTKLANLGMKISAEQKGVAEFEEKHRRYFDFQRRTGQLPLQREGELVDYRNVLHRDG 361
Query: 414 SVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRL 473
SVLMSV+LDQLK PE+LY+ LA KL++GMP+KDLATVD+ILL +LP V D +RLA+KRL
Sbjct: 362 SVLMSVTLDQLKNPEVLYRDLATKLIIGMPYKDLATVDTILLNKLPEVADRASRLAVKRL 421
Query: 474 VDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEI 533
D+ +GV+TPL+EQL PLPHAM L L E+ +GA++ LP GTRL V+LRGDE E+L
Sbjct: 422 TDVGIGVLTPLAEQLANPLPHAMALATLDEIISGAHENLPAGTRLAVTLRGDEPEEQLAK 481
Query: 534 LKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
LKD+D M+L +P ++K RV A LFEYL N++NFPVIHH++FP HRDDLVI
Sbjct: 482 LKDLDLIMLLLYIPEGDEKSSRVHA---LFEYLQTNDINFPVIHHLKFPANTHRDDLVIK 538
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
+G+ GA+LVDGLGDG+LLEA DFDFLR+TSF +LQGCRMRNTKTEYVSCPSCGRTLF
Sbjct: 539 SGSEAGAMLVDGLGDGVLLEAADLDFDFLRNTSFGMLQGCRMRNTKTEYVSCPSCGRTLF 598
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
DLQ++SAEIREKT HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+R
Sbjct: 599 DLQDVSAEIREKTDHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRR 658
Query: 714 GIAMEQATDALIQLIKDHGRWAEPPAEE 741
GIAME+AT+ LI LIK+HGRW +P E
Sbjct: 659 GIAMEKATNELIGLIKEHGRWVDPEPSE 686
>gi|29367407|gb|AAO72576.1| isoprenoid biosynthesis-like protein [Oryza sativa Japonica Group]
Length = 608
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/608 (87%), Positives = 575/608 (94%), Gaps = 1/608 (0%)
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFAD
Sbjct: 1 VRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFAD 60
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
RRAQFEQLEYT+D+YQKEL+HIE+VFSPLVEKCK+YGRA+RIGTNHGSLSDRIMSYYGDS
Sbjct: 61 RRAQFEQLEYTEDDYQKELEHIEKVFSPLVEKCKQYGRAMRIGTNHGSLSDRIMSYYGDS 120
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEMY GWDYPLHLGVT
Sbjct: 121 PRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMYNLGWDYPLHLGVT 180
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPCRRLANLG AA+LQ GV
Sbjct: 181 EAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCRRLANLGTHAADLQIGV 240
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APFEEKHR YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVSLDQLKA ELLY+SL
Sbjct: 241 APFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAXELLYRSL 300
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AAKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDISMGV+TPLSEQLTKPLPH
Sbjct: 301 AAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDISMGVLTPLSEQLTKPLPH 360
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI-DATMILHDLPFNEDKI 553
A+ LVN+ ELS+GA+KLLPEGTRL V+LRGDESYE+L++LK + D TM+LH +P+ E+K
Sbjct: 361 AIALVNVDELSSGAHKLLPEGTRLAVTLRGDESYEQLDLLKGVDDITMLLHSVPYGEEKT 420
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
GRV AARRLFEYL N LNFPVIHHI+FP ++RDDLVIGAG NVGALLVDGLGDG+LLE
Sbjct: 421 GRVHAARRLFEYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGANVGALLVDGLGDGVLLE 480
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
A Q+F+FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+SA+IREKTSHLPGVS
Sbjct: 481 AADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVS 540
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV+RGIAME ATDALIQLIKDHGR
Sbjct: 541 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAMEGATDALIQLIKDHGR 600
Query: 734 WAEPPAEE 741
W +PP EE
Sbjct: 601 WVDPPVEE 608
>gi|168028097|ref|XP_001766565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Physcomitrella patens subsp. patens]
gi|162682210|gb|EDQ68630.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Physcomitrella patens subsp. patens]
Length = 691
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/689 (74%), Positives = 597/689 (86%), Gaps = 1/689 (0%)
Query: 54 SSDIAELQPASEGSPLL-VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTN 112
+ ++ E++PASEGS LL VPR+KYCESI+K +RRKTRTV VG V +GSEHPIRVQTMTT
Sbjct: 2 APELVEMKPASEGSQLLAVPRKKYCESIYKPIRRKTRTVNVGGVTVGSEHPIRVQTMTTT 61
Query: 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP 172
DTKDV TVE+VMRIAD+G D+VRITVQGK+EADAC+ IKN+LVQK YNIPLVADIHFAP
Sbjct: 62 DTKDVQRTVEQVMRIADKGCDIVRITVQGKKEADACYSIKNTLVQKGYNIPLVADIHFAP 121
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+A++VAE FDKIR+NPGNFADRRAQFE+L YTD +Y +EL+HIEEVF+PLVEKCKKYGR
Sbjct: 122 PIAMKVAEFFDKIRINPGNFADRRAQFEKLVYTDADYAEELRHIEEVFTPLVEKCKKYGR 181
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIGTNHGSLSDRIMSY+GDSPRGMVESAF+FARICRK DFHNF+FSMKASN VVMVQA
Sbjct: 182 AMRIGTNHGSLSDRIMSYHGDSPRGMVESAFQFARICRKNDFHNFVFSMKASNSVVMVQA 241
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRLLV EMYV+ WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+
Sbjct: 242 YRLLVFEMYVNDWDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEE 301
Query: 353 EIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRD 412
EIDPC +LANLGM+ + Q+G+ F+E HR YFDF+RR+GQLP+QKEG+ VD R VLHRD
Sbjct: 302 EIDPCSKLANLGMKISAKQKGLPEFQENHRRYFDFERRTGQLPLQKEGDLVDVRNVLHRD 361
Query: 413 GSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
GSVLMSV+LDQLK PE LY++LA KL++GMP+KDLATVD+I L +LP+ +D +RLA+KR
Sbjct: 362 GSVLMSVTLDQLKNPEALYRNLATKLIMGMPYKDLATVDTIFLNKLPAAEDRASRLAVKR 421
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELE 532
L D+ +GV+TP++EQL LPHAM L L E+++G +K LP G RL V+LRGDE E+LE
Sbjct: 422 LTDVGIGVLTPVAEQLVNSLPHAMALATLDEIASGTHKELPTGIRLAVTLRGDEPEEKLE 481
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+LKD+D M+L LP ++K V A+R+LFEYL N L+FPVIHH++FP HRDDLVI
Sbjct: 482 MLKDLDLIMLLQYLPEGDEKSSHVHASRKLFEYLQTNKLDFPVIHHLKFPANTHRDDLVI 541
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
AG+ GA+LVDGLGDG++LEA QDFDF+R+TSF +LQGCRMR+TKTEYVSCPSCGRTL
Sbjct: 542 KAGSEAGAMLVDGLGDGIMLEAADQDFDFIRNTSFGMLQGCRMRHTKTEYVSCPSCGRTL 601
Query: 653 FDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
FDLQEISAEIREKT HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+
Sbjct: 602 FDLQEISAEIREKTDHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVR 661
Query: 713 RGIAMEQATDALIQLIKDHGRWAEPPAEE 741
RGIAM AT+ LI LIK+HGRW +P E
Sbjct: 662 RGIAMAMATNELIGLIKEHGRWVDPEPTE 690
>gi|168024759|ref|XP_001764903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683939|gb|EDQ70345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 618
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/617 (78%), Positives = 552/617 (89%)
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK 184
MRIAD+G D+VRITVQG+READAC+EIKN+LVQK Y+IPLVADIHFAP +A++VA+CFDK
Sbjct: 1 MRIADRGCDIVRITVQGRREADACYEIKNTLVQKGYDIPLVADIHFAPPIAMKVADCFDK 60
Query: 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244
IR+NPGNFADRRAQFE+L YT+ +YQ+EL+HIEEVF+PLVEKCKK GRA+RIGTNHGSLS
Sbjct: 61 IRINPGNFADRRAQFEKLSYTEADYQEELRHIEEVFTPLVEKCKKLGRAIRIGTNHGSLS 120
Query: 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG 304
DRIMSYYGDSPRGMVESAFEFARICRK DFHNFLFSMKASNPVVMVQAYRLLV+EMYV+
Sbjct: 121 DRIMSYYGDSPRGMVESAFEFARICRKHDFHNFLFSMKASNPVVMVQAYRLLVSEMYVND 180
Query: 305 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+EIDPC +LANLG
Sbjct: 181 WDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEEEIDPCTKLANLG 240
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
M+ + Q+GV F+EKHR YFDFQRR+GQLP+QKE E VDYR VLHRDGSVL+SV+LDQL
Sbjct: 241 MKISAEQKGVPEFQEKHRRYFDFQRRTGQLPLQKEEELVDYRNVLHRDGSVLLSVTLDQL 300
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
K+PE LYK+LA KL++GMP+KDLATVD+ILL +LP+V+D D+RLA+KRL+DI +GV+ PL
Sbjct: 301 KSPEFLYKNLATKLIIGMPYKDLATVDTILLNKLPAVEDMDSRLAVKRLIDIGIGVLVPL 360
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
EQL KPLPHAMVL L E+S+G +K LP GTRL V+LRGDE E+L ILKD+D M+LH
Sbjct: 361 VEQLAKPLPHAMVLATLDEISSGFHKELPAGTRLAVTLRGDEPEEQLAILKDLDLIMLLH 420
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
LP +++ RV A+RRLFEYL N LNFPVIHHI+FP I+RD+LVI AG+ VGA+LVD
Sbjct: 421 YLPEGDERSSRVHASRRLFEYLQTNTLNFPVIHHIKFPANINRDELVIKAGSEVGAMLVD 480
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
GLGDG+LLEA DFDFLR +SF +LQGCRMRNTKTEYVSCPSCGRTLFDLQ++SAEIRE
Sbjct: 481 GLGDGVLLEASDLDFDFLRKSSFGMLQGCRMRNTKTEYVSCPSCGRTLFDLQDVSAEIRE 540
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
KT HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+RGIAME+ATD L
Sbjct: 541 KTDHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRGIAMEKATDEL 600
Query: 725 IQLIKDHGRWAEPPAEE 741
I+LIK+HGRW +P E
Sbjct: 601 IRLIKEHGRWVDPEPTE 617
>gi|384252205|gb|EIE25681.1| putative chloroplast 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate
synthase precursor [Coccomyxa subellipsoidea C-169]
Length = 748
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/707 (60%), Positives = 523/707 (73%), Gaps = 14/707 (1%)
Query: 42 RRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQK------YCESIHKTVRRKTRTVMVGN 95
+R I ++S +Q P+++P++K YCESI++T+RR TRT+ +G
Sbjct: 23 KRAACISHTSRGRRRHIPIQGVVAEGPIILPQEKKLALPKYCESIYQTIRRPTRTIHIGK 82
Query: 96 VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSL 155
V GSEHP+R+QTMTT DT+DVAGTVE+V R D GA++VRITVQGK+EA AC +I+ +L
Sbjct: 83 VETGSEHPVRLQTMTTTDTRDVAGTVEQVKRCVDSGAEIVRITVQGKKEAAACMDIREAL 142
Query: 156 VQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDD-EYQKELQ 214
+ Y++PLVADIHF P VA+ VAE F+KIR+NPGNFAD R FE + Y D +++ E +
Sbjct: 143 FKDGYDVPLVADIHFQPQVAMMVAEAFEKIRINPGNFADGRKTFEVINYDDPAQFKAEQE 202
Query: 215 HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274
HI E F+PLVEKCK+ GRA+RIGTNHGSLS RI+SYYGD+PRGMVESAFEFA ICR D+
Sbjct: 203 HIRETFTPLVEKCKRLGRAMRIGTNHGSLSARILSYYGDTPRGMVESAFEFADICRDHDY 262
Query: 275 HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL 334
HNFLFSMKASNP+VMVQAYRLL EMY GWDYPLHLGVTEAGEGEDGRMKSAIGIG LL
Sbjct: 263 HNFLFSMKASNPLVMVQAYRLLAEEMYAKGWDYPLHLGVTEAGEGEDGRMKSAIGIGALL 322
Query: 335 QDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQL 394
DGLGDTIRVSLTE PE EI PC +LA G RA GV PF E HR F RR+G+L
Sbjct: 323 MDGLGDTIRVSLTEDPELEIVPCGKLAGFGERACREGFGVDPFPEAHRDIHTFTRRAGRL 382
Query: 395 PIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSIL 454
P Q+EG+ VD+R +LHRDGSVL +V+L +L+ PEL Y+ L AKLVVGMPFKD AT D++L
Sbjct: 383 PEQREGDPVDFRPLLHRDGSVLSAVTLQELEKPELTYRKLGAKLVVGMPFKDQATSDTLL 442
Query: 455 LRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE---LSTGAYKL 511
L E+P+ D D R AL RL ++ + VI P + PL HA+ L E
Sbjct: 443 LPEVPASSDKDKRRALARLQEVGVHVIAPAAALEADPLQHAVAAFPLSEAAAAVRAGGVR 502
Query: 512 LPEGT-RLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENN 570
LPEG R VS+ G E E++ L+D A + L ++ + RV A+RR FE L ++
Sbjct: 503 LPEGAGRFAVSVDGTEPEEDVAALRDSGAVLALLNV---APGVSRVHASRRFFERLQSHD 559
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLL 630
++ PVIH FP G+ RD+LV+ +GT +GALLVDGLGDG+ +E P +D DFLR SF LL
Sbjct: 560 IDIPVIHQRVFPAGVSRDELVLTSGTEIGALLVDGLGDGVAIECPSEDLDFLRTMSFGLL 619
Query: 631 QGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADA 690
QG RMRNTKTEYVSCPSCGRTLFDLQE++ +IR +T HLPGVSIA+MGCIVNGPGEMADA
Sbjct: 620 QGSRMRNTKTEYVSCPSCGRTLFDLQEVTEQIRTQTGHLPGVSIAVMGCIVNGPGEMADA 679
Query: 691 DFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
DFGYVGGAPGKIDLYVGK VV+RGI M+ A D L++LIK+HGRW EP
Sbjct: 680 DFGYVGGAPGKIDLYVGKEVVRRGIPMDGACDQLVELIKEHGRWKEP 726
>gi|302843882|ref|XP_002953482.1| hypothetical protein VOLCADRAFT_63610 [Volvox carteri f.
nagariensis]
gi|300261241|gb|EFJ45455.1| hypothetical protein VOLCADRAFT_63610 [Volvox carteri f.
nagariensis]
Length = 679
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/661 (62%), Positives = 510/661 (77%), Gaps = 3/661 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
KYCES+++T RR TRTVM+G V +GSEH I +QTMTT DT++V TV++V + AD GAD
Sbjct: 4 NKYCESVYQTQRRPTRTVMIGKVPVGSEHRIALQTMTTTDTRNVQLTVDQVKKCADAGAD 63
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRITVQGK+EA+AC I+ L + Y++PLVADIHF P+VA+ VA+ F+KIR+NPGNF
Sbjct: 64 IVRITVQGKKEAEACMRIREQLFKDRYDVPLVADIHFQPTVAMMVADAFEKIRINPGNFV 123
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D R F+ + Y D +++E + IEE F+PLV KCK+ GRAVRIGTNHGSLS RI+S+YGD
Sbjct: 124 DGRKSFDVINYDDPRFERERELIEETFTPLVLKCKQLGRAVRIGTNHGSLSARILSFYGD 183
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL EMY GWDYPLHLGV
Sbjct: 184 TPRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEMYKKGWDYPLHLGV 243
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE EIDPC+RLA LG RA G
Sbjct: 244 TEAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEYEIDPCKRLAGLGERAWSTGLG 303
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
VAPF E R F+RR G LP+Q EGEE+D+RG LHRDG+V +VSL+ LK PE+ YK
Sbjct: 304 VAPFTETTRDTHTFKRRVGDLPVQHEGEELDFRGALHRDGTVFSAVSLEDLKQPEVTYKK 363
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
L AKL VGMPFKD+AT DSILLRELP D + R AL+RL +++ VI PL PL
Sbjct: 364 LGAKLAVGMPFKDIATSDSILLRELPPSADKEGRRALRRLQEVTTHVIAPLDALTRDPLA 423
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV L++ G L +R + + G E+ E+L L+ + ++L ++ D +
Sbjct: 424 GAIALVPLKQAVQGGIALPQGSSRWAIEVDGTETEEQLGALQGLGPIVVLLNV---ADGV 480
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ A+RR+F+ + +N+ PVIH+I+FP G HRD++VI G+ VG LLVDGLGDG L+E
Sbjct: 481 SRLHASRRVFDAIKRHNVTAPVIHNIRFPAGTHRDEIVINTGSLVGGLLVDGLGDGALIE 540
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
PG+D DFLR T+F LLQG RMRNTKTEYVSCPSCGRTLF+LQE++ +IR++T HLPGV+
Sbjct: 541 CPGEDLDFLRTTAFGLLQGSRMRNTKTEYVSCPSCGRTLFNLQEVTDQIRQRTGHLPGVA 600
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPG MADADFGYVGGAPGKIDLYVGK VV+R I ME A D LI+LIK++GR
Sbjct: 601 IAVMGCIVNGPGRMADADFGYVGGAPGKIDLYVGKEVVRRAIPMESACDQLIELIKEYGR 660
Query: 734 W 734
W
Sbjct: 661 W 661
>gi|428185276|gb|EKX54129.1| hypothetical protein GUITHDRAFT_63981 [Guillardia theta CCMP2712]
Length = 679
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/668 (61%), Positives = 516/668 (77%), Gaps = 6/668 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC+S++KT RRKTRTV G+V IGSEHPI +QTMTT T D+ G++++VMR AD GA LV
Sbjct: 10 YCDSVYKTTRRKTRTVQCGDVPIGSEHPIALQTMTTAMTTDIQGSIDQVMRCADAGAQLV 69
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQG+READAC +IK L++K Y PLVADIHFAP +AL+VA+ FDKIR+NPGNFAD
Sbjct: 70 RLTVQGQREADACSKIKEGLLKKGYTTPLVADIHFAPKIALQVADAFDKIRINPGNFADG 129
Query: 196 RAQFEQLEYTDDE-YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R FE++ Y + E Y+ EL +IEEVF+PLV KCK+ GRA+RIGTNHGSLS R +SYYGD+
Sbjct: 130 RKSFEEITYENPEDYKAELDYIEEVFTPLVLKCKELGRAMRIGTNHGSLSARTLSYYGDT 189
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESAFEFARICRK D+HNFLFSMKASNP VMVQAYRLL AEMY GWDYP+HLGVT
Sbjct: 190 PAGMVESAFEFARICRKHDYHNFLFSMKASNPKVMVQAYRLLAAEMYDLGWDYPMHLGVT 249
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE-LQQG 373
EAGEGEDGRMKSAIGIG+LLQDGLGDTIRVSLTE P E++PC +L ++ M + +
Sbjct: 250 EAGEGEDGRMKSAIGIGSLLQDGLGDTIRVSLTEDPWFELEPCTKLRDIAMNQKDKIWTP 309
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
V ++E R++ F +R GQLP+Q E + +D R VLHRDGSV+ +VSL+ L +P+ LY +
Sbjct: 310 VPTWKETTRNFMSFSQRQGQLPLQHESDPIDIRNVLHRDGSVISAVSLEDLASPDKLYYN 369
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
L K VGMPFKDLAT DSILL++ P++D R AL+RL ++ +GV+ P E +P+P
Sbjct: 370 LGCKTAVGMPFKDLATSDSILLQQSPAMDASKERTALRRLQEVGVGVLCPAQELQARPIP 429
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
+A+ + +L+++ + KL R +++RGDES EEL LK +A M+L +P D++
Sbjct: 430 NAIAVYDLKQMPSKGAKLPDGAIRYALTVRGDESDEELAKLKSSEAVMLLLRVP---DEV 486
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
RV A+RR+F +L EN+++ PVIHHI F RD +V+ G+ VG LVDG GDG+L++
Sbjct: 487 SRVHASRRVFNFLKENSIDTPVIHHIVFGADKSRDYVVLLTGSEVGCSLVDGNGDGVLMQ 546
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
AP DFLR +SF LLQGCRMRNTKTEYVSCPSCGRTLFDLQ ++ +I + T HLPGV+
Sbjct: 547 AP-LPLDFLRLSSFGLLQGCRMRNTKTEYVSCPSCGRTLFDLQTVTDQISKATGHLPGVT 605
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK +V++ I E+A D LI+LIK++GR
Sbjct: 606 IAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKELVRKAIPSEKACDELIELIKENGR 665
Query: 734 WAEPPAEE 741
W EP E
Sbjct: 666 WVEPSKNE 673
>gi|159465453|ref|XP_001690937.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlamydomonas reinhardtii]
gi|158279623|gb|EDP05383.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlamydomonas reinhardtii]
Length = 681
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/668 (63%), Positives = 515/668 (77%), Gaps = 6/668 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI+KT+RR TRTVM+G V +GS+H I +QTMTT DT++V TV++V + AD GAD+V
Sbjct: 9 YCESINKTIRRPTRTVMIGKVPVGSQHRIALQTMTTTDTRNVQLTVDQVKKCADAGADIV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RITVQGK+EA+AC +I+ L + Y++PLVADIHF P+VA+ VA+ F+KIRVNPGNFAD
Sbjct: 69 RITVQGKKEAEACMKIREQLFKDKYDVPLVADIHFQPTVAMMVADAFEKIRVNPGNFADG 128
Query: 196 RAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R F+ + Y D E+++E + IEE F+PLV KCK+ GRA+RIGTNHGSLS RI+SYYGD+
Sbjct: 129 RKTFDVINYDDPREFERERELIEETFTPLVLKCKELGRAIRIGTNHGSLSARILSYYGDT 188
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL E Y WDYPLHLGVT
Sbjct: 189 PRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEQYKRSWDYPLHLGVT 248
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+DPC+RLA LG RA GV
Sbjct: 249 EAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFEMDPCKRLAGLGERAWGSGLGV 308
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF E R F RR G LP+Q GE++D+RG LHRDG+V +VSL LK PE LYK L
Sbjct: 309 APFPETTRDTHTFTRRVGDLPVQAPGEDLDFRGALHRDGTVYNAVSLADLKQPEFLYKRL 368
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AKL VGMPFKD+AT DSI+L E+P+ D DAR AL+RL +++ VI P+ PLP
Sbjct: 369 GAKLAVGMPFKDIATADSIVLSEVPAAADKDARRALRRLQEVTTHVIAPIEALAKDPLPG 428
Query: 495 AMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV LQ+ + G + LPEG TR+ V + G E+ EL +K ++ + L +D +
Sbjct: 429 AIALVALQQAAAGPVQ-LPEGSTRMAVQIDGTETEAELAAIKALNPIVALL---ATKDGV 484
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ ++RR+F+ L + + PVIH I FP G RD++VI G+ VG LLVDGLGDG ++E
Sbjct: 485 SRLHSSRRVFDVLKRHGITTPVIHRITFPAGTVRDEIVITTGSLVGGLLVDGLGDGAMVE 544
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
PG+D DFLR T+F LLQGCRMRN KTEYVSCPSCGRTLF+LQE++ +IR +T HLPGV+
Sbjct: 545 CPGEDTDFLRTTAFGLLQGCRMRNIKTEYVSCPSCGRTLFNLQEVTDQIRTRTGHLPGVA 604
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+RGI ME A D LI+LIK+HGR
Sbjct: 605 IAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRGIPMESACDQLIELIKEHGR 664
Query: 734 WAEPPAEE 741
W EP EE
Sbjct: 665 WVEPAVEE 672
>gi|61742128|gb|AAX54905.1| putative chloroplast 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate
synthase precursor [Chlamydomonas reinhardtii]
Length = 681
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/668 (63%), Positives = 515/668 (77%), Gaps = 6/668 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI+KT+RR TRTVM+G V +GS+H I +QTMTT DT++V TV++V + AD GAD+V
Sbjct: 9 YCESINKTIRRPTRTVMIGKVPVGSQHRIALQTMTTTDTRNVQLTVDQVKKCADAGADIV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RITVQGK+EA+AC +I+ L + Y++PLVADIHF P+VA+ VA+ F+KIRVNPGNFAD
Sbjct: 69 RITVQGKKEAEACMKIREQLFKDKYDVPLVADIHFQPTVAMMVADAFEKIRVNPGNFADG 128
Query: 196 RAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R F+ + Y D E+++E + IEE F+PLV KCK+ GRA+RIGTNHGSLS RI+SYYGD+
Sbjct: 129 RKTFDVINYDDPREFERERELIEETFTPLVLKCKELGRAIRIGTNHGSLSARILSYYGDT 188
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL E Y WDYPLHLGVT
Sbjct: 189 PRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEQYKRSWDYPLHLGVT 248
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+DPC+RLA LG RA GV
Sbjct: 249 EAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFEMDPCKRLAGLGERAWGSGLGV 308
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF E R F RR G LP+Q GE++D+RG LHRDG+V +VSL LK PE LYK L
Sbjct: 309 APFPETTRDTHTFTRRVGDLPVQAPGEDLDFRGALHRDGTVYNAVSLADLKQPEFLYKRL 368
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AKL VGMPFKD+AT DSI+L E+P+ D DAR AL+RL +++ VI P+ PLP
Sbjct: 369 GAKLAVGMPFKDIATADSIVLSEVPAAADKDARRALRRLQEVTTHVIAPIEALAKDPLPG 428
Query: 495 AMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV LQ+ + G LPEG TR+ V + G E+ +EL +K ++ + L +D +
Sbjct: 429 AIALVALQQAAAGPVT-LPEGSTRMAVQIDGTETEDELAAIKALNPIVALL---ATKDGV 484
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ ++RR+F+ L + + PVIH I FP G RD++VI G+ VG LLVDGLGDG ++E
Sbjct: 485 SRLHSSRRVFDVLKRHGITTPVIHRITFPAGTVRDEIVITTGSLVGGLLVDGLGDGAMVE 544
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
PG+D DFLR T+F LLQGCRMRN KTEYVSCPSCGRTLF+LQE++ +IR +T HLPGV+
Sbjct: 545 CPGEDTDFLRTTAFGLLQGCRMRNIKTEYVSCPSCGRTLFNLQEVTDQIRTRTGHLPGVA 604
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+RGI ME A D LI+LIK+HGR
Sbjct: 605 IAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRGIPMESACDQLIELIKEHGR 664
Query: 734 WAEPPAEE 741
W EP EE
Sbjct: 665 WVEPAVEE 672
>gi|145350194|ref|XP_001419500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
chloroplast precursor (1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase) (ISPG) [Ostreococcus lucimarinus
CCE9901]
gi|144579732|gb|ABO97793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
chloroplast precursor (1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase) (ISPG) [Ostreococcus lucimarinus
CCE9901]
Length = 680
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/679 (62%), Positives = 507/679 (74%), Gaps = 14/679 (2%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
+L+P KYC + +TVRRKTRTV VGNV IGSEHPI QTMTT+DT+DV TV EV+R A
Sbjct: 6 VLMPTGKYCVNHAETVRRKTRTVHVGNVKIGSEHPIVKQTMTTSDTRDVEKTVAEVIRCA 65
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
D GA++VRITVQG +EA AC IK +LV K Y+ PL+ADIHFAP VA+ VAECFDKIRVN
Sbjct: 66 DAGAEMVRITVQGMQEAKACKIIKETLVAKGYDTPLIADIHFAPKVAMMVAECFDKIRVN 125
Query: 189 PGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
PGNFAD R FE + Y TD+EY EL IEE+F+PLV KCK+ G A+RIGTNHGSLS R
Sbjct: 126 PGNFADGRKTFENILYETDEEYNAELAEIEEIFTPLVLKCKERGVAMRIGTNHGSLSART 185
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+S +GD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQAYRLL EMY GWDY
Sbjct: 186 LSRFGDTPMGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQAYRLLSHEMYKLGWDY 245
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
PLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E EI+PC RLANLGM+A
Sbjct: 246 PLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASELEIEPCTRLANLGMKA 305
Query: 368 AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
GV FE+ R + F RR+G LP QK+ + +D+R +LHRDGSVL +V+ QL +
Sbjct: 306 CAENIGVEQFEDSVRDFKTFTRRTGDLPEQKDSDAIDFRNILHRDGSVLAAVTTAQLASE 365
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
+ Y+ L AKL VGMP +D+AT DSILL E+P+ + A +++RL +I GV+ P
Sbjct: 366 DGFYRELGAKLAVGMPLRDIATCDSILLSEVPAASEEKALRSIRRLQEIGCGVVVPADLL 425
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDL 546
PL +A+ LV+ E+ LP G R V+L G E+ E+L+ + DA M+L
Sbjct: 426 RATPLENAIALVSADEVGAP----LPAGAARKAVTLNGFETVEQLKAVAASDAVMVLIK- 480
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
+D R+ ++RR+ E +++ PVIHH+ P G + D+VI +G+ VG LLVDG
Sbjct: 481 --TKDGESRLHSSRRIAEVMAQVGAKMPVIHHMYMPTG-DKSDIVIQSGSQVGGLLVDGF 537
Query: 607 GDGLLLEAPGQD----FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 662
GDG+L++ G D DFLR TSF LLQG RMRNTKTEYVSCPSCGRTLFDLQE++A+I
Sbjct: 538 GDGVLIQYAGSDKDVSLDFLRTTSFGLLQGSRMRNTKTEYVSCPSCGRTLFDLQEVTAQI 597
Query: 663 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATD 722
+EKT HLPGV+IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VVKRGIAME A D
Sbjct: 598 QEKTGHLPGVAIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVKRGIAMETACD 657
Query: 723 ALIQLIKDHGRWAEPPAEE 741
LIQLIKD+ RW E EE
Sbjct: 658 ELIQLIKDNDRWIEKEVEE 676
>gi|308807557|ref|XP_003081089.1| putative chloroplast 1-hydroxy-2-methyl-2-(ISS) [Ostreococcus
tauri]
gi|116059551|emb|CAL55258.1| putative chloroplast 1-hydroxy-2-methyl-2-(ISS) [Ostreococcus
tauri]
Length = 726
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/694 (61%), Positives = 511/694 (73%), Gaps = 14/694 (2%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
S+D + + + ++VP +YC + +TVRRKTRTV VGNV IGSEH I QTMTT+D
Sbjct: 38 SADAVSREYVVDATGVMVPTGEYCVNHAETVRRKTRTVHVGNVKIGSEHAIVKQTMTTSD 97
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
T+DV TV EV+R AD GAD+VRITVQG +EA AC IK +L+ + Y PL+ADIHFAP
Sbjct: 98 TRDVEKTVAEVIRCADAGADMVRITVQGMQEAKACKAIKETLLARGYTTPLIADIHFAPK 157
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGR 232
VA+ VAECFDKIRVNPGNFAD R FE + Y TD+EY EL IEEVF+PLV KCK+ G
Sbjct: 158 VAMMVAECFDKIRVNPGNFADGRKTFENILYETDEEYNAELAEIEEVFTPLVLKCKERGV 217
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQA
Sbjct: 218 AMRIGTNHGSLSARTLSRYGDTPMGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQA 277
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRLL EMY GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E
Sbjct: 278 YRLLSHEMYKLGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASEL 337
Query: 353 EIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRD 412
EI+PC RLANLGM+A GV FEE HR + F RRSG LP QK+ + +D R +LHRD
Sbjct: 338 EIEPCTRLANLGMKACADNIGVEQFEETHRDFKVFTRRSGDLPEQKDSDAIDLRNILHRD 397
Query: 413 GSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
GSVL +V+ QL + + Y+ L AKL VGMP +D+AT DSILL E+P + A +++R
Sbjct: 398 GSVLAAVTTQQLASEDGFYRELGAKLAVGMPLRDIATCDSILLSEVPPASEEKALRSIRR 457
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEEL 531
L +I GVI P+ E PL +A+ LV+ +++ LP G R V+L G ES E++
Sbjct: 458 LQEIGCGVIVPVEELKKNPLENAIALVSADQIN----DPLPAGAARKAVTLNGFESAEQI 513
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
+ + DA M L +D R+ ++RRLFE ++ PVIHH+ P+G R D+V
Sbjct: 514 KAVCASDAVMALIK---TKDGESRLHSSRRLFEEIANCGGKLPVIHHMFMPSG-DRSDVV 569
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQ----DFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
I +G +G LL DGLGDG+L++ G DFLR TSF LLQG RMRNTKTEYVSCPS
Sbjct: 570 IQSGAQIGGLLCDGLGDGVLIQYTGAAKDISLDFLRTTSFGLLQGSRMRNTKTEYVSCPS 629
Query: 648 CGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
CGRTLFDLQE++A+I+EKT HLPGV+IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVG
Sbjct: 630 CGRTLFDLQEVTAQIQEKTGHLPGVAIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 689
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
K VV+RGIA E A D LI+LIK+HGRW + EE
Sbjct: 690 KEVVRRGIASEVACDELIELIKEHGRWKDKEVEE 723
>gi|412991022|emb|CCO18394.1| predicted protein [Bathycoccus prasinos]
Length = 745
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/680 (61%), Positives = 502/680 (73%), Gaps = 13/680 (1%)
Query: 64 SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEE 123
+EG LL P YC +T RRKTRT+ +GNV +GS+HPI QTMTT+DT+DV TV E
Sbjct: 65 TEGGVLL-PTGLYCPDTTQTFRRKTRTIQIGNVKVGSDHPIVKQTMTTSDTRDVDATVNE 123
Query: 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFD 183
+MR AD GA++VRITVQG +EA AC EIKN L+Q Y P++ADIHFAP VA+ VA+C D
Sbjct: 124 IMRCADAGAEMVRITVQGMQEAKACQEIKNKLLQSGYTTPIIADIHFAPKVAMTVADCLD 183
Query: 184 KIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
KIR+NPGNFAD R +FE + Y TD+EYQ E+ IEEVF+PLV KCK A+RIGTNHGS
Sbjct: 184 KIRINPGNFADGRKKFEDILYETDEEYQAEIDEIEEVFTPLVLKCKANNVAMRIGTNHGS 243
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS R +S +GD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQAYRLL EMY
Sbjct: 244 LSARTLSRFGDTPAGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQAYRLLSYEMYK 303
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E EI+PC RLAN
Sbjct: 304 LGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASELEIEPCTRLAN 363
Query: 363 LGMRA-AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+A AE G F E R + F+R +G LP QK E +DYR VLHRDGSV+ SV++
Sbjct: 364 LGMKACAEKLGGEDKFTETKRDFQSFERFNGDLPEQKADETIDYRNVLHRDGSVISSVTV 423
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
+QL++ + Y L L VGMP +D+AT DSILLR+ P A +++RL +I GV+
Sbjct: 424 EQLESEDQFYAELGCMLAVGMPLRDIATSDSILLRQAPQASQEKAMRSIRRLQEIGCGVL 483
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPE-GTRLVVSLRGDESYEELEILKDIDAT 540
P +E P+P+A+ +V+L + A + LPE R V+L G ES E+L LKDIDA
Sbjct: 484 VPEAELKKNPVPNAIAIVSLAQAI--AKEALPECAERFAVTLNGSESNEDLAKLKDIDAI 541
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+L E R+ ++RR+FE L N + PVIHH +G + D+VI G VG
Sbjct: 542 MLLIQ---TEKGRSRIHSSRRIFEVLQANGVKIPVIHHKHIVDG-DKSDVVIQCGAQVGG 597
Query: 601 LLVDGLGDGLLLEAPGQD---FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
LL DG GDG+LLE G + FLR TSF LLQG RMRNTKTEYVSCPSCGRTLFDLQE
Sbjct: 598 LLCDGNGDGVLLEYVGNEKIPLSFLRTTSFGLLQGSRMRNTKTEYVSCPSCGRTLFDLQE 657
Query: 658 ISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAM 717
++A+I EKT HLPGV+IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+RGI M
Sbjct: 658 VTAQIAEKTGHLPGVAIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRGIPM 717
Query: 718 EQATDALIQLIKDHGRWAEP 737
E AT+ LI+LIK+H RW EP
Sbjct: 718 EGATEELIELIKEHDRWVEP 737
>gi|255088627|ref|XP_002506236.1| predicted protein [Micromonas sp. RCC299]
gi|226521507|gb|ACO67494.1| predicted protein [Micromonas sp. RCC299]
Length = 697
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/695 (58%), Positives = 512/695 (73%), Gaps = 10/695 (1%)
Query: 44 FTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHP 103
+V+R +S E A+ S +P YC +T+RRKTRTV +G V +GS+HP
Sbjct: 1 MSVVRAASTEPK--IESVAAAVPSDAFLPDGLYCVDNTQTIRRKTRTVTIGKVKMGSDHP 58
Query: 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP 163
I QTMTT+DT+DV TV EV + AD GA++VRITVQG +EA AC EIK LV+ Y+ P
Sbjct: 59 IVRQTMTTSDTRDVEATVAEVKKCADAGAEMVRITVQGMQEAKACAEIKKRLVEDGYDTP 118
Query: 164 LVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSP 222
L+ADIHFAP VA+ VAECFDKIRVNPGNFAD R +FE + Y TD+EY E++ IE++F+P
Sbjct: 119 LIADIHFAPKVAMMVAECFDKIRVNPGNFADGRKKFEDILYETDEEYNAEIEEIEKIFTP 178
Query: 223 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK 282
LV KCK+ G A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK D+HNF+FSMK
Sbjct: 179 LVLKCKERGVAMRIGTNHGSLSARTLSRYGDTPAGMVESAFEFARICRKHDYHNFVFSMK 238
Query: 283 ASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
ASNP+VMVQAYRLL EMY GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTI
Sbjct: 239 ASNPLVMVQAYRLLAHEMYKLGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTI 298
Query: 343 RVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEE 402
RVSLTE E++PC RL ++G +AA+ + GV FEEK R + DF RR+ LP+QKE +
Sbjct: 299 RVSLTEASHLEMEPCTRLRDVGHKAAQEKWGVDKFEEKGRDFKDFARRASDLPVQKEDDA 358
Query: 403 VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVD 462
+D R +LHRDGSVL +V+ QL + + Y+ L AKL VGMP +D+AT DSILL E+P
Sbjct: 359 IDLRNILHRDGSVLSAVTPAQLASEDPFYRDLGAKLAVGMPLRDIATSDSILLTEVPEAS 418
Query: 463 DHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPE-GTRLVVS 521
D A +++RL +I +GV+ +++ +P+ +A+ LV ++ ++ A +P+ R+ V
Sbjct: 419 DEKAMRSIRRLQEIGVGVVADVAQLAERPVDNAVALVAAKDATSAA---VPDCAARVAVV 475
Query: 522 LRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQF 581
G E+ EE++ +D M L + + R+ A+RRLF + + PVIHHIQF
Sbjct: 476 FDGTETEEEVKAALGVDPVMALIKCAAD---VSRLHASRRLFTNILAAGSSVPVIHHIQF 532
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
+ +DD+VI +G+ VG LL DGLGDG+L+E P + D+LR TSF LLQG RMRNTKTE
Sbjct: 533 TDADVKDDIVIQSGSQVGGLLCDGLGDGVLIEHPTAELDYLRRTSFGLLQGSRMRNTKTE 592
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
YVSCPSCGRTLFDLQE++A I E+T HLPGV+IA+MGCIVNGPGEMADADFGYVGGAPGK
Sbjct: 593 YVSCPSCGRTLFDLQEVTAAISERTGHLPGVAIAVMGCIVNGPGEMADADFGYVGGAPGK 652
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
IDLYVGK VVKRGI + A D LIQLIKDHGRW +
Sbjct: 653 IDLYVGKEVVKRGIDNDTACDELIQLIKDHGRWVD 687
>gi|303274695|ref|XP_003056663.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461015|gb|EEH58308.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 732
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/704 (58%), Positives = 507/704 (72%), Gaps = 11/704 (1%)
Query: 35 RKFKSGRRRFTVIRNSS--NSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVM 92
RK + TV R +S + I E+ A + + LL P YC + ++T RRKTRTV
Sbjct: 23 RKHAKKAQVSTVTRAASAEKAGPKIVEVAAAVDHNDLL-PEGLYCNAHYQTTRRKTRTVT 81
Query: 93 VGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK 152
+GNV +GS+HPI QTMTT+DT+DV TV EV++ AD GA++VRITVQG +EA AC IK
Sbjct: 82 IGNVKLGSDHPIVRQTMTTSDTRDVEATVAEVIKCADAGAEMVRITVQGMQEAKACKVIK 141
Query: 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQK 211
+L+ K Y PL+ADIHFAP VA+ VAECFDKIRVNPGNFAD R FE+ Y TD+EY +
Sbjct: 142 ETLMAKGYTTPLIADIHFAPKVAMMVAECFDKIRVNPGNFADGRKTFEEKLYETDEEYNE 201
Query: 212 ELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271
EL+ IEE F+PLV KCK+ G A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK
Sbjct: 202 ELEMIEETFTPLVLKCKERGVAMRIGTNHGSLSARTLSRYGDTPAGMVESAFEFARICRK 261
Query: 272 LDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIG 331
D+HNF+FSMKASNP+VMVQAYRLL EM+ GWDYPLHLGVTEAGEGEDGRMKS+IGIG
Sbjct: 262 HDYHNFVFSMKASNPLVMVQAYRLLAHEMWKLGWDYPLHLGVTEAGEGEDGRMKSSIGIG 321
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
LL DGLGDTIRVSLTE E++PC RL +LGM A E GV F+E R + F RR
Sbjct: 322 ALLLDGLGDTIRVSLTEASHLEMEPCTRLRDLGMDACEKMIGVEKFDETARDFKSFGRRE 381
Query: 392 GQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVD 451
QLP+QKE + +D R VLHRDGSVL +V+ + L + + Y+ L AKL VGMP +D+AT D
Sbjct: 382 SQLPVQKEDDAIDLRNVLHRDGSVLSAVTPEMLASEDPFYRDLGAKLAVGMPLRDIATSD 441
Query: 452 SILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKL 511
SI+LRE+P DD A +++RL +I +GV+ P+ P+ +A+ +V ++ +T
Sbjct: 442 SIILREIPKPDDEKANRSIRRLQEIGVGVLAPVDALAKTPVANAIAMVAAKDAATAT--- 498
Query: 512 LPE-GTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENN 570
+P+ R+ V + G ES EE+ D M L + R+ A+RR+FE++
Sbjct: 499 IPDCAARVAVVIDGTESEEEIVAALATDPVMC---LIATAPGVSRLHASRRVFEWMHRAG 555
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLL 630
PVIH++QF +D +VI +G G LL DGLGDG+++E PG +LR TSF LL
Sbjct: 556 SAVPVIHNMQFDASAEKDTVVIESGAQAGGLLCDGLGDGVVVEHPGVPLSYLRTTSFGLL 615
Query: 631 QGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADA 690
QG RMRNTKTEYVSCPSCGRTLFDLQE++A I E+T HLPGV+IA+MGCIVNGPGEMADA
Sbjct: 616 QGSRMRNTKTEYVSCPSCGRTLFDLQEVTAAISERTGHLPGVAIAVMGCIVNGPGEMADA 675
Query: 691 DFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
DFGYVGGAPGKIDLYVGK VVKRGI + A D LIQLIKDHGRW
Sbjct: 676 DFGYVGGAPGKIDLYVGKEVVKRGIDNDTACDELIQLIKDHGRW 719
>gi|298708973|emb|CBJ30926.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase,
chloroplast precursor [Ectocarpus siliculosus]
Length = 695
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/678 (58%), Positives = 494/678 (72%), Gaps = 17/678 (2%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE T RR +RTV G V IGSEH I QTMTT +T DV TV +V++ AD GADL
Sbjct: 19 KYCEDTSATKRRTSRTVWAGKVPIGSEHRIARQTMTTTNTNDVDATVAQVIKCADAGADL 78
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRITVQGKREA +C I+ L + Y++PLVADIHF P VA+ VAE F+KIR+NPGNF D
Sbjct: 79 VRITVQGKREAKSCKLIREKLNELGYDVPLVADIHFQPKVAMDVAEVFEKIRINPGNFVD 138
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R FE+ Y + +E+ +L IE F PLV KCK+ GRA+RIGTNHGSLS R++SYYGD
Sbjct: 139 GRKTFEEYVYDSKEEFDADLIPIEASFKPLVLKCKELGRAMRIGTNHGSLSARVLSYYGD 198
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA EFA ICRK DFHNF+FSMKASNP+VMVQAYRLL AE Y GWDYPLHLGV
Sbjct: 199 TPRGMVESAVEFANICRKYDFHNFVFSMKASNPLVMVQAYRLLAAEQYRRGWDYPLHLGV 258
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+ PC LA +G RA G
Sbjct: 259 TEAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFELSPCAELAEIGKRATADTAG 318
Query: 374 ---VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL 430
V FEE R + F+RR+G LP Q+E + VD RG LHRDGSV+M +S++ L+ P+ L
Sbjct: 319 HAAVPAFEETTRDFQSFERRTGALPEQQETDPVDVRGYLHRDGSVMMPISVEDLQNPQAL 378
Query: 431 YKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTK 490
Y+ L K VGMPFKD+AT DS+ L ++P+ DD AR +L+R+ + +GV+ PL+
Sbjct: 379 YQVLGFKTAVGMPFKDIATTDSVYLEQVPATDDKKARTSLRRMQEAGVGVLAPLAALEAN 438
Query: 491 PLPHAMVLVNLQELS-TGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDATMI--LHDL 546
P+ +A+ +V+L++++ +G LPEG RL V + G E+L +L +I + L ++
Sbjct: 439 PIANAVAVVSLEDVAKSGGQVNLPEGAIRLAVEIEG---TEDLSVLSNISPKPMVGLLNV 495
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG--IHRDDLVIGAGTNVGALLVD 604
P + RV A+RR+F++L++ + VIH FP+ + +D ++ G VG LVD
Sbjct: 496 PAG---VSRVHASRRVFQHLADAKNDLAVIHLASFPDASEMTQDKFILSVGAQVGGCLVD 552
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
GLGDG++++APG D LR F LLQGCRMRNTKTEYVSCPSCGRTLFDLQE++A+I E
Sbjct: 553 GLGDGVMVQAPGLDVGMLRSVCFGLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVTAQIAE 612
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
KT HLPGV+IAIMGCIVNG GEMADADFGYVGGAPGK+DLYVGK +V++GI E+A DAL
Sbjct: 613 KTGHLPGVAIAIMGCIVNGVGEMADADFGYVGGAPGKVDLYVGKEMVQKGIPNEEACDAL 672
Query: 725 IQLIKDHGRWAEP-PAEE 741
I LIK +GRW + PAEE
Sbjct: 673 IDLIKANGRWVDKEPAEE 690
>gi|307108049|gb|EFN56290.1| hypothetical protein CHLNCDRAFT_144676 [Chlorella variabilis]
Length = 698
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/677 (56%), Positives = 470/677 (69%), Gaps = 58/677 (8%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
LL P KYCESI +T RR TRTV +G V +GSEHPI +QTMTT DT+D+ TVE+V R A
Sbjct: 56 LLTP--KYCESISQTRRRPTRTVDIGPVKVGSEHPIALQTMTTTDTRDIEATVEQVKRCA 113
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
D GAD+VRITVQ KREA+AC +I+ L + Y PLVADIHF P+VA+ VA+ F+KIR+N
Sbjct: 114 DAGADIVRITVQSKREAEACMKIRERLFKDRYTTPLVADIHFQPAVAMMVADAFEKIRIN 173
Query: 189 PGNFADRRAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
PGNFAD R F+ + Y D ++ E +I EVF+PLVEKCK RA+RIGTNHGSLS RI
Sbjct: 174 PGNFADGRKTFDVINYDDPAQFAAERDYIREVFTPLVEKCKSLNRAMRIGTNHGSLSARI 233
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+S+YGD+PRGMVESAFEFA ICR D+HNFLFSMKASNP+VM
Sbjct: 234 LSFYGDTPRGMVESAFEFADICRDHDYHNFLFSMKASNPLVM------------------ 275
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
GEDGRMKSAIGIG+LL DGLGDTIRVSLTE PE EIDPC RLANLG +A
Sbjct: 276 -----------GEDGRMKSAIGIGSLLMDGLGDTIRVSLTEDPEFEIDPCGRLANLGKKA 324
Query: 368 AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
+ GV FEE HR F RR G LP Q+EG+ DYR +LHRDGSVL V L+ P
Sbjct: 325 DQEGWGVDAFEE-HRDTHLFTRRVGTLPEQREGDTADYRPLLHRDGSVLSVVYPKDLEQP 383
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
E++Y+ L AKLVVGMPFKD+AT D+IL+ + PS D + R AL+RL ++ + V+ P
Sbjct: 384 EMMYRRLGAKLVVGMPFKDIATADTILMYQTPSSSDTEGRRALRRLQEVGVHVMAPAEVL 443
Query: 488 LTKPLPHAMVLVNLQELSTGAYKL----LPEGT-RLVVSLRGDESYEELEILKDIDATM- 541
PLP A+ ++ L ++ A++ LPEG RL V + G E +L LKD+ A M
Sbjct: 444 AADPLPDAVAVMQLA-VAASAHRAGGVKLPEGAGRLAVFIDGTEGEADLATLKDMGAVMA 502
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+L P + RV ++RR+FE L + ++ PVIHHI FP+G RDD+V+ +G+ VGAL
Sbjct: 503 LLKTAP----GLSRVHSSRRVFEQLQQQGISIPVIHHITFPDGTTRDDIVLQSGSMVGAL 558
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
+VDG GDGL++E +D D+LR T+F LLQGCRMRNTKTEY E++ +
Sbjct: 559 MVDGYGDGLVVECASEDTDYLRTTAFGLLQGCRMRNTKTEY--------------EVTDQ 604
Query: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQAT 721
IR +T HLPGVSIA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK VV+R I E A
Sbjct: 605 IRTRTGHLPGVSIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVRRNIPNESAC 664
Query: 722 DALIQLIKDHGRWAEPP 738
D LI LIK+HGRW EPP
Sbjct: 665 DELIDLIKEHGRWQEPP 681
>gi|224006295|ref|XP_002292108.1| gcpe-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972627|gb|EED90959.1| gcpe-like protein [Thalassiosira pseudonana CCMP1335]
Length = 686
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/675 (54%), Positives = 480/675 (71%), Gaps = 21/675 (3%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE ++ RRKTRTV G + GS+HPI QTM T DT +V ++E++MR AD+G DL
Sbjct: 3 KYCEDLYSVTRRKTRTVTCGPIQFGSDHPIVRQTMATTDTANVDASIEQIMRCADKGFDL 62
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
+RITVQGKREA+A +I+ L +K Y+IPL AD+HF P VA VA+ +KIR+NPGNFAD
Sbjct: 63 IRITVQGKREANAAAKIREGLFKKGYDIPLCADMHFQPVVAQLVADAVEKIRINPGNFAD 122
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R FE+ Y ++ +Y KE +++ E PLV+KCK R +RIGTNHGSLS R++SYYGD
Sbjct: 123 GRKDFEEKVYESEADYVKEREYLVEAMLPLVQKCKDLNRCMRIGTNHGSLSSRVLSYYGD 182
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA EFA ICR D+HNF+FSMKASNP+VMVQ+YRLL +EMY WDYPLHLGV
Sbjct: 183 TPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRLLASEMYRLDWDYPLHLGV 242
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGM-RAAELQQ 372
TEAGEGEDGRMKSA+GIGTLL DGLGDT+RVSLTE PE E +PC RL+ + R A
Sbjct: 243 TEAGEGEDGRMKSAVGIGTLLADGLGDTVRVSLTEDPEFEYEPCNRLSEMAEGRLAATNP 302
Query: 373 GVAPFEEKHRHYFD------FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS---LDQ 423
A + + Y D + RR G LP +KEGE+VD L+ +GSV+ +S L +
Sbjct: 303 EAAARQSAVKKYVDTRDITTYSRRVGTLPTKKEGEKVDVEQFLNPNGSVISYISPKMLSE 362
Query: 424 LKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITP 483
AP LYK L K VGMPFKD+AT DS+ +RELP+ DD +AR AL+R++++ GVI P
Sbjct: 363 GNAP-YLYKELGFKTAVGMPFKDIATSDSVFMRELPATDDSNARTALRRMMEVGTGVIVP 421
Query: 484 LSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDATMI 542
E PL +A+ LV+L E + + +PEG RL V + G E + + +KD+D MI
Sbjct: 422 AEELKENPLENAVALVSLTE-AVKSNGEIPEGAIRLAVEIDGSEDDDTIAKVKDLDPVMI 480
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
+ ++++ ++ A+RR+FE L N +N P IHH + + +DL + GT +G+LL
Sbjct: 481 FIAI---DEELSQLHASRRIFEILKTNEINVPAIHHYK-SSVADSNDLALELGTKIGSLL 536
Query: 603 VDGLGDGLLLEAPGQ---DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
DG GDG+L+E G+ +FLR+T F+LLQGCRMRNTKTE+VSCPSCGRTLFDLQE +
Sbjct: 537 TDGNGDGILIEQVGETNFSVEFLRNTGFSLLQGCRMRNTKTEFVSCPSCGRTLFDLQETT 596
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A+I E T HLPGV++A+MGCIVNGPGEMADADFGYVG PGK+DLY GK VV++ I +
Sbjct: 597 AKITEATGHLPGVTVAVMGCIVNGPGEMADADFGYVGTLPGKVDLYYGKEVVRKNIPNDD 656
Query: 720 ATDALIQLIKDHGRW 734
A ++L++LIK++G W
Sbjct: 657 AVESLVELIKEYGMW 671
>gi|219116532|ref|XP_002179061.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
gi|209402469|gb|ACI45957.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase precursor [Phaeodactylum tricornutum]
gi|217409828|gb|EEC49759.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
Length = 757
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/680 (54%), Positives = 474/680 (69%), Gaps = 20/680 (2%)
Query: 72 PRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQG 131
P QKYCE +++ RRKTRTV G + GS+HPI QTM T +T DV T+++VMR AD+G
Sbjct: 67 PIQKYCEDLYEVTRRKTRTVNCGPIKFGSDHPIVRQTMATTNTADVEATMDQVMRCADKG 126
Query: 132 ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGN 191
DLVR+TVQGKREA+AC +I+ L +K Y+IPL AD+HF P VAL VA+ +KIR+NPGN
Sbjct: 127 FDLVRVTVQGKREANACAKIREGLFKKGYDIPLCADMHFQPVVALLVADAVEKIRINPGN 186
Query: 192 FADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
FAD R F + Y T+++Y E ++ E PLVEKCK R +RIGTNHGSLS R++S+
Sbjct: 187 FADGRKDFNEKVYETEEDYYAERGYLVEALQPLVEKCKDLDRCMRIGTNHGSLSSRVLSF 246
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310
YGD+PRGMVESA EFA ICR LD+HNF+FSMKASNP+VMVQ+YRLL AE Y WDYPLH
Sbjct: 247 YGDTPRGMVESAIEFADICRSLDYHNFVFSMKASNPLVMVQSYRLLAAEQYRLDWDYPLH 306
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG------ 364
LGVTEAGEGEDGRMKSAIGIGTLL DGLGDT+RVSLTE PE E DPC RLA +
Sbjct: 307 LGVTEAGEGEDGRMKSAIGIGTLLADGLGDTVRVSLTEDPEFEYDPCNRLAEIAEGRLAA 366
Query: 365 -MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQ 423
A+ +Q + R F RR G LP + EG+ VD G L+ GSV+ V+ +
Sbjct: 367 NNAEAKARQAAVQTYKDTRDITTFARRQGALPAKDEGDAVDCSGFLNTAGSVISPVTPEM 426
Query: 424 LK--APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
LK + + LY+ L K VGMPFKD+AT DSI +R +P D ++R AL+RL++++MGV+
Sbjct: 427 LKGSSAQYLYQDLGCKTAVGMPFKDVATTDSIFMRTVPPSSDTESRTALRRLIEVNMGVV 486
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDAT 540
P PLP+A+ L++L + K LPEG RL V++ G E E + +KD+
Sbjct: 487 VPAEVLEKDPLPNAVALMDLTDAIAKGGK-LPEGAIRLAVTIDGSEDDETIAKVKDLQPA 545
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
P +E + + +ARR+FE N++ VIHH + N ++L + GT +G+
Sbjct: 546 FAFLK-PKSE--LSHLHSARRVFELFKSNDIETAVIHHFE-SNTNDANELALQVGTKIGS 601
Query: 601 LLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
LL DG GDG+++E G++ DFLR TSF+LLQG RMRNTKTE+VSCPSCGRTLFDLQ
Sbjct: 602 LLTDGNGDGIMIEQVGEEKPFSVDFLRRTSFSLLQGSRMRNTKTEFVSCPSCGRTLFDLQ 661
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
E +A I+E T HLPGV++A+MGCIVNGPGEMADADFGYVG PGK+DLY GK VV++ +
Sbjct: 662 ETTAGIQEATGHLPGVTVAVMGCIVNGPGEMADADFGYVGTLPGKVDLYYGKEVVRKSVP 721
Query: 717 MEQATDALIQLIKDHGRWAE 736
+A DALI LIK++G W +
Sbjct: 722 NAEAVDALIDLIKEYGMWKD 741
>gi|397625071|gb|EJK67655.1| hypothetical protein THAOC_11283, partial [Thalassiosira oceanica]
Length = 756
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/681 (53%), Positives = 462/681 (67%), Gaps = 18/681 (2%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L P +YCE ++ RR TRTV G V GSEHPI QTM T DT +V ++E++MR AD
Sbjct: 74 LGPLGRYCEDLYSVRRRPTRTVTCGPVKFGSEHPIVRQTMATTDTANVDASIEQIMRCAD 133
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
+G DLVRITVQGKREA+A +I+ L +K Y IPL AD+HF P VA VAE +KIR+NP
Sbjct: 134 EGFDLVRITVQGKREANAAMQIREGLFKKGYTIPLCADMHFQPKVAQLVAEAVEKIRINP 193
Query: 190 GNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
GNFAD R FE Y ++ +Y E Q++ + PLVE CK+ R +RIGTNHGSLS R++
Sbjct: 194 GNFADGRKDFEDKVYESEADYVAERQYLFDAMVPLVETCKRLDRCMRIGTNHGSLSSRVL 253
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
SYYGD+PRGMVESA EFA ICR D+HNF+FSMKASNP+VMVQ+YRLL +EMY WDYP
Sbjct: 254 SYYGDTPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRLLASEMYRLDWDYP 313
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG-MRA 367
LHLGVTEAGEGEDGRMKSA+GIGTLL DGLGDT+RVSLTE PE E PC RL+ + R
Sbjct: 314 LHLGVTEAGEGEDGRMKSAVGIGTLLADGLGDTVRVSLTEDPEFEYKPCNRLSEMAEARL 373
Query: 368 AELQQGVAPFEEKHRHYFD------FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
A G +E R Y D + RR G LP+ ++VD L+ +GSV+ +V+
Sbjct: 374 AAKNPGAKERQEAVRTYVDTRDVTSYARRVGDLPVTAADDKVDVGLFLNPNGSVISAVNP 433
Query: 422 DQLKAPE--LLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
L A LYK L K VGMPFKD+AT DSI +R LP D D R AL+R++++ G
Sbjct: 434 WMLSADSAPYLYKELGFKTAVGMPFKDVATSDSIFMRTLPEADKKDERTALRRMMEVGTG 493
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VI P E PL + + L++L++ K+ RL + + G E E + +KD++
Sbjct: 494 VIVPAEELERNPLDNTVALMSLEDAVKADGKIPDCAIRLAIEIDGSEDDETIAKVKDLNP 553
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
M+ + D + ++ A+RR+FE N++N P IHH + + +++ +G GT VG
Sbjct: 554 LMVFISIA---DGLSQLHASRRIFEIFKSNDINTPAIHHFKTTSD-DSNEIALGLGTKVG 609
Query: 600 ALLVDGLGDGLLLEAPGQ----DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
+LL DG GDG+L+E G+ DF+R+T F+LLQGCRMRNTKTE+VSCPSCGRTLFDL
Sbjct: 610 SLLTDGNGDGILIEQVGETANFSVDFVRNTGFSLLQGCRMRNTKTEFVSCPSCGRTLFDL 669
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
QE +A I E T HLPGV+IA+MGCIVNGPGEMADADFGYVG PGK+DLY GK +V++GI
Sbjct: 670 QETTASITEATGHLPGVTIAVMGCIVNGPGEMADADFGYVGTTPGKVDLYYGKEIVRKGI 729
Query: 716 AMEQATDALIQLIKDHGRWAE 736
E A L++LIK + W +
Sbjct: 730 KNEDAVGELVELIKSYDMWQD 750
>gi|323454677|gb|EGB10547.1| hypothetical protein AURANDRAFT_71112 [Aureococcus anophagefferens]
Length = 2166
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/691 (56%), Positives = 480/691 (69%), Gaps = 33/691 (4%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCES+ + VRRKTRTV G V+ GS+H I QTM T T+DVAGT+++VMR +D G DL
Sbjct: 70 KYCESLREVVRRKTRTVTAGPVSFGSDHKIVRQTMGTTSTRDVAGTIDQVMRCSDAGFDL 129
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+TV G +EA AC +I+ L +K Y+IPL AD+HF P VA++ AE +KIR+NPGNFAD
Sbjct: 130 FRLTVVGMKEATACHDIREGLFKKGYDIPLCADMHFQPKVAMKTAEAVEKIRINPGNFAD 189
Query: 195 -RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
R+ + + Y T+++Y ++ +I E F+PLV KCK+ RA+RIGTNHGSLS R++S++G
Sbjct: 190 GRKVDEDTVSYETEEDYLRDRDNIVEQFAPLVLKCKELNRAMRIGTNHGSLSARVLSFFG 249
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
DS RGMVESA EFA ICR LD+HNF+FSMKASNPVVM+Q YRLL AE Y GWDYPLHLG
Sbjct: 250 DSSRGMVESAVEFADICRSLDYHNFVFSMKASNPVVMIQGYRLLAAEQYRLGWDYPLHLG 309
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG----MRAA 368
VTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTE PE E PC RLA L + A
Sbjct: 310 VTEAGEGEDGRMKSAIGIGTLLGDGLGDTIRVSLTEDPEYEYAPCNRLAELSEANELPPA 369
Query: 369 ELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLK--- 425
+ Q P R F RR G LP Q+EG++ DYRG+LHRDGSVL +S ++LK
Sbjct: 370 KKAQLAVPEYSDTRDVTMFDRRRGFLPAQREGDQHDYRGLLHRDGSVLSFISAEELKTLG 429
Query: 426 -----APELLYKSLAAKLVVG-----MPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
L+++L AK V G +P KD+AT D++ LRE P++DD AR ALK L
Sbjct: 430 ELGPFGASALFRALGAKTVDGPGGASLPMKDVATTDTLFLREPPAIDDEAARDALKTLRG 489
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQEL----STGAYKLLPEGTRLVVSLRGDESYEEL 531
+ + PL PLP A+ V+ L + G L + R+VV+ RGDE+ E+L
Sbjct: 490 AGVHCVVPLDALAEAPLPGAVPAVDCAALGDDATLGKLPLASDSGRMVVTCRGDETDEQL 549
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYL---SENNLNFPVIHHIQFPNGIHRD 588
E L+ + + L + + R+ A RRLFE L + + V+HH++ P R
Sbjct: 550 EALRAM-GDQVDFVLAETDPSLSRLHATRRLFEKLGRGAPGDEGLSVVHHLRAPE-CDRS 607
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLE---APGQDFD--FLRDTSFNLLQGCRMRNTKTEYV 643
+L + G G LL DGLGDG+L+E A +FD +LRDTSF LLQG RMRNTKTE+V
Sbjct: 608 ELALQLGMQAGGLLGDGLGDGVLVEPEVANTANFDVAYLRDTSFALLQGSRMRNTKTEFV 667
Query: 644 SCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
SCPSCGRTLFDLQE++A+I EKT HLPGV+IAIMGCIVNGPGEMADADFGYVG PGKID
Sbjct: 668 SCPSCGRTLFDLQEVTAQISEKTGHLPGVAIAIMGCIVNGPGEMADADFGYVGTVPGKID 727
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
LYVGKTVV++GI E A DALIQLIKD+G+W
Sbjct: 728 LYVGKTVVEKGIPDELACDALIQLIKDNGKW 758
>gi|338176232|ref|YP_004653042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Parachlamydia
acanthamoebae UV-7]
gi|336480590|emb|CCB87188.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Parachlamydia
acanthamoebae UV-7]
Length = 656
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/673 (51%), Positives = 465/673 (69%), Gaps = 39/673 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S ++T+RRKTR V++GN+ +G HPIR+Q+MTT+ T++V TV++++R+AD G ++
Sbjct: 2 KYCTSHYQTIRRKTREVLIGNIGVGGNHPIRIQSMTTSSTRNVEATVDQIIRLADAGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQG +EA+AC IKN LV+K Y IPLVADIHF P A+ VA+ DKIR+NPGN+ D
Sbjct: 62 VRMTVQGMKEAEACEHIKNDLVKKGYLIPLVADIHFYPPAAMGVADFVDKIRINPGNYVD 121
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+RA F+ +EY D Y E++ IEE F+PLVEKCK+ +A+RIGTNHGSLSDRIM+ YGD+
Sbjct: 122 KRANFKVIEYDDATYAAEIEKIEEKFTPLVEKCKRLKKAIRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RICRK DFH+ +FSMKASNP+VM+QAYRLLVAEM GWDYPLHLGVT
Sbjct: 182 PFGMVESALEFTRICRKNDFHDLIFSMKASNPLVMIQAYRLLVAEMEKLGWDYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGR+KSA+GIG LL DG+GDTIRVSLTE P E+DPC+RL +L QGV
Sbjct: 242 EAGEGEDGRIKSAMGIGALLLDGIGDTIRVSLTEDPWNEVDPCQRLVHLAQNCQ--GQGV 299
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF+E HR + ++R P +HR+G+V++SV+ + LK + Y+SL
Sbjct: 300 APFQESHRSITEVKKREITFPPHV---------AMHRNGTVIVSVTSEMLKKTD-FYQSL 349
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
+ +G +T D I++ P D+ ++ L R+V +G+ +P PL H
Sbjct: 350 GCENQLGTIKIKTSTPDMIVINH-PERDEKVLQM-LNRMVKSGIGLASPY------PLTH 401
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRG----------DESYEELEILKDIDATMILH 544
A+V+ +LQE T +++ + R V L +S EE + L D+ +I+
Sbjct: 402 ALVIQSLQEAMT-SHQKQQQTARFAVGLPARPQPLAIDIDTDSEEEWKWLHDLKPEVIIF 460
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
K R+ A+RR FE++ ++ V+ H + + +++DL+I A GALL D
Sbjct: 461 S-----PKEHRLHASRRFFEWIQNAKISTSVMLHFTYVS--NKEDLIIQAAAEFGALLCD 513
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
GLG+G+ +EAP + DFLR SFN+LQ RMR +KT+++SCPSCGRTLFDLQ++S IR
Sbjct: 514 GLGEGIWIEAP-HELDFLRQLSFNILQAARMRISKTDFISCPSCGRTLFDLQDVSRNIRN 572
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
+T+HLPGV IAIMGCIVNGPGEMADADFGYVG PG IDLY+GK V++ I +A D L
Sbjct: 573 RTAHLPGVKIAIMGCIVNGPGEMADADFGYVGSKPGMIDLYLGKQCVEKDIPFSEAVDRL 632
Query: 725 IQLIKDHGRWAEP 737
++LIK HGRW EP
Sbjct: 633 VELIKRHGRWVEP 645
>gi|46446374|ref|YP_007739.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Protochlamydia amoebophila UWE25]
gi|50400882|sp|Q6MD85.1|ISPG_PARUW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|46400015|emb|CAF23464.1| probable gcpE protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 654
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/672 (51%), Positives = 457/672 (68%), Gaps = 32/672 (4%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
++KYCE+IH+T RR TR V VGNV IG HPIR+Q+MTT+ T+DV T+E+V+R+ADQG
Sbjct: 3 QKKYCEAIHQTERRPTRIVNVGNVGIGGNHPIRIQSMTTSSTRDVEATIEQVIRLADQGC 62
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
++VR+TVQG +EADAC IK L+++ Y IPLVADIHF P A+RV + DK+R+NPGNF
Sbjct: 63 EIVRVTVQGIKEADACEHIKKGLIKRGYQIPLVADIHFYPPAAMRVVDFVDKVRINPGNF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D+RA F+Q+ Y D+ Y +E++ IEE F+PLVEKCK+ RA+RIGTNHGSLSDRIM+ YG
Sbjct: 123 VDKRASFKQIVYDDESYAREIERIEEKFTPLVEKCKRLNRAMRIGTNHGSLSDRIMNRYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EFARICRK D+HNFLFSMKASNP VM+QAYRLL MY WDYPLHLG
Sbjct: 183 DTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAMYALEWDYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGEGEDGR+KSA+GIG+LL DG+GDTIRVSLTE P EI+PC+RL L +A QQ
Sbjct: 243 VTEAGEGEDGRIKSAMGIGSLLIDGIGDTIRVSLTEDPWHEINPCQRLIKLA--SAYQQQ 300
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
GVAPF E +R +RR L +HRDG+V +S+ ++ LK LY+
Sbjct: 301 GVAPFIENYRQIEAIERRQVHLSSTVP---------MHRDGTVFISLPINMLKEAS-LYQ 350
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITP-------LS 485
+ + G P AT D+++L+ P+ D + R L+ L D+ +G+ + +
Sbjct: 351 QIGCEGPFGKPKLKTATADNLVLKN-PNSDSEEKR-QLQILKDLGIGLFSKDPFEMSLVI 408
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD 545
L K L V S+ K G L++ + DE+ +E + + + +I+
Sbjct: 409 HPLKKWLQSRAVDSFASRFSSSWAK--SAGQPLIIQIT-DETEKEWKEVISLKPQLIILS 465
Query: 546 LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
N R+ +R+ FE+L +N LN+PVI + F +D ++ A G+LL DG
Sbjct: 466 PSTN-----RLHYSRQFFEWLQQNQLNYPVI--LNFTYQGENEDTILLASMECGSLLCDG 518
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREK 665
LG+G+ LE P D FLR SF++LQ R+R +KT+++SCPSCGRTLF+LQ+++ I+ +
Sbjct: 519 LGEGVWLEGP-YDILFLRQLSFSILQAARLRMSKTDFISCPSCGRTLFNLQDVTKRIQSR 577
Query: 666 TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
TSHLPGV IAIMGCIVNGPGEMADADFGYVG PGKIDLYVGK V++ I A D L+
Sbjct: 578 TSHLPGVKIAIMGCIVNGPGEMADADFGYVGSKPGKIDLYVGKECVEKDIDFADADDRLV 637
Query: 726 QLIKDHGRWAEP 737
LI+ HGRW EP
Sbjct: 638 NLIRAHGRWIEP 649
>gi|282891885|ref|ZP_06300364.1| hypothetical protein pah_c200o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498145|gb|EFB40485.1| hypothetical protein pah_c200o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 632
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/650 (51%), Positives = 446/650 (68%), Gaps = 39/650 (6%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G HPIR+Q+MTT+ T++V TV++++R+AD G ++VR+TVQG +EA+AC IKN LV+
Sbjct: 1 MGGNHPIRIQSMTTSSTRNVEATVDQIIRLADAGCEIVRMTVQGMKEAEACEHIKNDLVK 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
K Y IPLVADIHF P A+ VA+ DKIR+NPGN+ D+RA F+ +EY D Y E++ IE
Sbjct: 61 KGYLIPLVADIHFYPPAAMGVADFVDKIRINPGNYVDKRANFKVIEYDDATYAAEIEKIE 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
E F+PLVEKCK+ +A+RIGTNHGSLSDRIM+ YGD+P GMVESA EF RICRK DFH+
Sbjct: 121 EKFTPLVEKCKRLKKAIRIGTNHGSLSDRIMNRYGDTPFGMVESALEFTRICRKNDFHDL 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+FSMKASNP+VM+QAYRLLVAEM GWDYPLHLGVTEAGEGEDGR+KSA+GIG LL DG
Sbjct: 181 IFSMKASNPLVMIQAYRLLVAEMEKLGWDYPLHLGVTEAGEGEDGRIKSAMGIGALLLDG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQ 397
+GDTIRVSLTE P E+DPC+RL +L QGVAPF+E HR + ++R P
Sbjct: 241 IGDTIRVSLTEDPWNEVDPCQRLVHLAQNCQ--GQGVAPFQESHRSITEVKKREITFPPH 298
Query: 398 KEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRE 457
+HR+G+V++SV+ + LK + Y+SL + +G +T D I++
Sbjct: 299 V---------AMHRNGTVMISVTSEMLKKTD-FYQSLGCENQLGTIKIKTSTPDMIVINH 348
Query: 458 LPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTR 517
P D+ ++ L R+V +G+ +P PL A+V+ +LQE T +Y+ + R
Sbjct: 349 -PERDEKVLQM-LNRMVKSGIGLASPY------PLTQALVIQSLQEAMT-SYQKQQQTAR 399
Query: 518 LVVSLRG----------DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS 567
V L +S EE + L D+ +I+ K R+ A+RR FE++
Sbjct: 400 FAVGLPARPQPLAIDIDTDSEEEWKWLHDLKPEVIIFS-----PKEHRLHASRRFFEWIQ 454
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSF 627
++ PV+ H + + +++DL+I A GALL DGLG+G+ +EAP + DFLR SF
Sbjct: 455 NAKISTPVMLHFTYVS--NKEDLIIQAAAEFGALLCDGLGEGIWIEAP-HELDFLRQLSF 511
Query: 628 NLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEM 687
N+LQ RMR +KT+++SCPSCGRTLFDLQ++S IR +T+HLPGV IAIMGCIVNGPGEM
Sbjct: 512 NILQAARMRISKTDFISCPSCGRTLFDLQDVSRNIRNRTAHLPGVKIAIMGCIVNGPGEM 571
Query: 688 ADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
ADADFGYVG PG IDLY+GK V++ I +A D L++LIK HGRW EP
Sbjct: 572 ADADFGYVGSKPGMIDLYLGKQCVEKDIPFSEAVDRLVELIKRHGRWVEP 621
>gi|338732866|ref|YP_004671339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simkania
negevensis Z]
gi|336482249|emb|CCB88848.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simkania
negevensis Z]
Length = 604
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/671 (49%), Positives = 431/671 (64%), Gaps = 84/671 (12%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y E+I++T R KTR V VG V +G +PIR+Q+MTT+DT+DV T ++MR+AD G ++
Sbjct: 2 RYSEAIYQTKRWKTREVKVGKVGVGGNNPIRIQSMTTSDTRDVEATANQIMRLADTGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+TVQGK+EA+AC IKN+LVQK Y+IP+VADIHF P A+ V + DK+RVNPGNF D
Sbjct: 62 ARVTVQGKKEAEACEGIKNTLVQKGYDIPVVADIHFYPPAAMLVVDYVDKVRVNPGNFVD 121
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
RRA F +EY D Y+ EL+ I+E F PLVEKCKK RA+RIGTNHGSLSDRIM+ YGD+
Sbjct: 122 RRATFRTIEYDDASYEAELRKIDETFGPLVEKCKKLKRAMRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EFAR+CRKL +H+F+FSMKASNP+VM+QAYRLLV EM GW+YPLHLGVT
Sbjct: 182 PFGMVESALEFARVCRKLGYHDFMFSMKASNPLVMMQAYRLLVHEMMKLGWNYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ-- 372
EAG+GEDGR+KSA+GIG+LL DGLGDTIRVSLTE P EIDPC+RL +R AE +
Sbjct: 242 EAGDGEDGRVKSAVGIGSLLLDGLGDTIRVSLTEDPWAEIDPCKRL----IRLAESYEGK 297
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
G PF E R+ +RR V LHRDGSV++++
Sbjct: 298 GTLPFIETKRNVAAIERRY-----------VRQTSPLHRDGSVILNLE------------ 334
Query: 433 SLAAKLVVGMPFKDLAT----VDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL 488
P DL T VD++ + + + D D+++ TP
Sbjct: 335 ---------SPSTDLGTKEGKVDAVYMEKYEPLKD-----------DVTILTRTP----- 369
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
+ A+++ +L+E E ++ GD S L + MIL +L
Sbjct: 370 --NVSGALLVKDLEEFD--------ETAQVAWVKDGDPS--SWNRLLEHPVKMILLELTE 417
Query: 549 NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGD 608
+ + R F+++ ++ L+ PVI + + + +D VI A +GALL DG G+
Sbjct: 418 SP-----IHQGRYFFDWIQQSKLDIPVILVVSY--DLSEEDTVIHAAAELGALLGDGYGE 470
Query: 609 GLLLE---APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREK 665
G+LL PGQ+ R SFN+LQ CR+R +KTE+++CP CGRTLFDLQE++ IR K
Sbjct: 471 GILLRTRLTPGQN----RSLSFNILQACRLRASKTEFIACPGCGRTLFDLQEVTKRIRLK 526
Query: 666 TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
TSHLPGV IAIMGCIVNGPGEMADADFGYVG GK+DLYVGK V+R I + A + LI
Sbjct: 527 TSHLPGVKIAIMGCIVNGPGEMADADFGYVGSRAGKVDLYVGKECVERNIDFDAADERLI 586
Query: 726 QLIKDHGRWAE 736
+LIK H RW E
Sbjct: 587 ELIKAHDRWIE 597
>gi|429327881|gb|AFZ79641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Babesia equi]
Length = 770
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/691 (46%), Positives = 445/691 (64%), Gaps = 37/691 (5%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI +R TR V +G V IG PI +QTMT++DT DV TV+++++ GA +V
Sbjct: 88 YCESISNRIRFPTRCVKIGKVTIGGNSPIALQTMTSSDTNDVDATVDQILKSRQHGASMV 147
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQ REA + IK L+ +IPL+ADIHF P VAL A+ +DK+RVNPGN+ D
Sbjct: 148 RLTVQSPREAKSSVAIKEKLLSIGCDIPLIADIHFNPKVALLAADVYDKVRVNPGNYVDG 207
Query: 196 RAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R ++ Y T++E++K + IEE+F+PLVEKCKK +A+RIGTNHGSLS RIMSYYGDS
Sbjct: 208 RKNWDMKVYETEEEFRKSGEFIEEMFTPLVEKCKKLKKAIRIGTNHGSLSSRIMSYYGDS 267
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EFA IC KLDFH+ +FSMK+SN VM AYRLLV E+Y GW+YP+HLGVT
Sbjct: 268 PRGMVESALEFAAICVKLDFHDIVFSMKSSNVYVMTHAYRLLVHELYKRGWNYPIHLGVT 327
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG +DGR+KSA+GIGTLL DG+GDTIR+SLTE P E+ P R+L R ++
Sbjct: 328 EAGSVDDGRIKSALGIGTLLMDGIGDTIRMSLTEDPWLELSPARKLVECVERYTKINTKE 387
Query: 375 APFEEKHRHYFDFQRRSGQL--PIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
E R++ D ++R I K E + +L+ DGSV ++ + L P LYK
Sbjct: 388 TLRE--FRNFQDIEKRELDYGTSILKYAEGGNKNTLLNPDGSVGCILTSEDLSDPITLYK 445
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
SL + G+P +++ +VD ++L +P + + +K L++ + V+ P+ + P+
Sbjct: 446 SLGVSMNNGLPQRNIKSVDFVVLESVPQFHECSKQRIVKELIEGGIQVVAPVDQLKYNPI 505
Query: 493 PHAMVLVNLQEL----------STGAYKLLPEGTRL-VVSLR--GDESYEE-LEILKDID 538
++ LV+L++L + + +L +V++R G+E+ E+ L++ D +
Sbjct: 506 KFSIGLVDLEKLPNFQRSQSEKTEDNKDFIDYADKLPIVAVRITGNETDEQILQMCNDTN 565
Query: 539 ATM----------ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
+ + I+ + N + V RR+F L N N PVIH + + +
Sbjct: 566 SKVRIAGHAKVGFIIMTIDPN---LNNVATVRRIFGLLVRANSNIPVIHQLDLTSYKDHE 622
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEA--PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCP 646
D+V+ A T V LVD LG+GL+ + P Q+ + + S N+LQ RMR+ KT+++SCP
Sbjct: 623 DVVVAASTLVSCHLVDKLGEGLICKTSLPLQESNAI---SLNILQNARMRSFKTDFISCP 679
Query: 647 SCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
SCGRTLFD+Q+ + EI+++T HLPGV+IAIMGCIVNG GEMADADFGYVGG+PGK+DLYV
Sbjct: 680 SCGRTLFDIQKTTEEIKKRTGHLPGVTIAIMGCIVNGIGEMADADFGYVGGSPGKVDLYV 739
Query: 707 GKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
K +V+RGI +QA D LI LIK HGRW +P
Sbjct: 740 KKQLVERGIPNDQACDRLIDLIKKHGRWIDP 770
>gi|403222264|dbj|BAM40396.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Theileria
orientalis strain Shintoku]
Length = 834
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/743 (41%), Positives = 457/743 (61%), Gaps = 86/743 (11%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE+++K VR TR V +G V IG +PI +QTMT+ DT DV TV++++++ + GAD+
Sbjct: 91 KYCENVYKRVRFPTRCVKIGKVTIGGNNPIALQTMTSCDTNDVKETVDQILKVQEYGADM 150
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQ RE + IK L N +IPL+ADIHF P VAL AE +DK+RVNPGN+ D
Sbjct: 151 VRLTVQSPREVKSSVLIKEKLTSLNCDIPLIADIHFNPKVALMSAEIYDKVRVNPGNYVD 210
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R ++ Y + +E++K ++IEE+F+PLVEKCK+ +A+RIGTNHGSLS R+MS+YGD
Sbjct: 211 GRKNWDTKVYDSYEEFKKSGEYIEEMFTPLVEKCKQLKKAIRIGTNHGSLSSRVMSFYGD 270
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMV SA EFA +CRK DFH+F+FSMK+SN VM+ AYRLLV EMY WDYP+HLGV
Sbjct: 271 TPLGMVMSAVEFAEVCRKNDFHDFVFSMKSSNVFVMIHAYRLLVNEMYKRSWDYPIHLGV 330
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL------------- 360
TEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P E+ P R+L
Sbjct: 331 TEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDPWYELLPSRKLLESVKELYPEKEE 390
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRS---GQLPIQKEGEEVDYRGVLHRDGSVLM 417
++ G + +E + ++ K R + + +RR+ G + E ++ +L+ +GSV
Sbjct: 391 SSNGDKKSESKDEEGDYD-KWRDFRNIERRNVKYGTSMLNYNDETKNH--LLNPNGSVGT 447
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD-- 475
++ L LYKSL +V G+P K L +VD ++L ++P +++ + +K L++
Sbjct: 448 ILNTHHLNNRIELYKSLGLDIVNGLPNKSLQSVDFVILEDVPYFHEYNKQRVVKELIEGG 507
Query: 476 ----------------ISMGVITPLSEQL---TKPLPHA------------MVLVNLQEL 504
++G++T ++ +KP + +V +NL E
Sbjct: 508 VHVISPIAKLRFNPIKFTIGLVTVKEYRMLIRSKPSQYYFDEKNKNNSNNRLVGINLDEE 567
Query: 505 STGAYKL----------------LPEGTRLVVSLRGDESYEELEILKDI---DATMILHD 545
+ L + +LVV + G+E+ EEL + A + +
Sbjct: 568 NGEGGGGTMESEDELELNRLMNELNKFEKLVVKITGNETDEELMEFFNTYKKQANQLNNK 627
Query: 546 LPFNE---------DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
NE K+ + RR+F +++ N + PVIH ++FPN + D+++ +
Sbjct: 628 EKKNEVGFIILEIDSKLNYMYTVRRIFGLINKTNCDLPVIHQLKFPNLEDQQDMLVKSCC 687
Query: 597 NVGALLVDGLGDGLLLEA--PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G L+D +G+G+++++ P Q + L + N+LQ RMRN KT+++SCPSCGRTLF+
Sbjct: 688 LLGCNLIDKMGEGIIIKSKLPIQITNQL---ALNILQNSRMRNIKTDFISCPSCGRTLFN 744
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+QE + EIR++ HLPGV+IAIMGCIVNG GEMADADFGYVGG+PGK+DLYV K +++R
Sbjct: 745 IQETTEEIRKRVGHLPGVTIAIMGCIVNGIGEMADADFGYVGGSPGKVDLYVKKKLIERN 804
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
I E+A D LI+LIK H +W EP
Sbjct: 805 IPKEKACDKLIELIKQHNKWVEP 827
>gi|156085603|ref|XP_001610211.1| gcpE protein [Babesia bovis]
gi|154797463|gb|EDO06643.1| gcpE protein [Babesia bovis]
Length = 772
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/708 (43%), Positives = 433/708 (61%), Gaps = 43/708 (6%)
Query: 67 SPLLVPR------QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
+PL +P YCES+ + +R TR V +GNV IG PI +QTMT++DT D+ T
Sbjct: 70 APLCIPNCNTASNNVYCESVTERIRFPTREVRIGNVTIGGNRPIALQTMTSSDTYDIDAT 129
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V++++ GA LVR+ VQ REA A IK L+ + N+PLVADIH++P VAL AE
Sbjct: 130 VKQIITCHQYGASLVRLAVQSPREAKASAVIKEKLLSQGCNVPLVADIHYSPKVALMAAE 189
Query: 181 CFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
FDK+RVNPGN+ D R +++ Y T++E+++ + IEE +PL+EKCKK RA+RIGTN
Sbjct: 190 IFDKVRVNPGNYVDGRKDWDEKIYKTEEEFREGTKLIEERLTPLIEKCKKLKRAIRIGTN 249
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLS RIMSYYGDSP GMV SA EFA IC K DFH+ +FSMK+SN VMV AYRLLV E
Sbjct: 250 HGSLSSRIMSYYGDSPMGMVMSAMEFAEICVKNDFHDIVFSMKSSNSFVMVHAYRLLVNE 309
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
+Y GW+YP+HLGVTEAG +DGR+KSA+GIG+LL DG+GDTIR+SLTE P E+ P R+
Sbjct: 310 LYKRGWNYPIHLGVTEAGSVDDGRIKSAMGIGSLLLDGIGDTIRLSLTEDPWLELLPGRK 369
Query: 360 LANL--GMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
L G+ + R + + RR+ + + +L+RDGSV
Sbjct: 370 LLQYVDGITKKDGSSTKPRIRSDFRDFNNISRRTIDYGTSLLDFDDGRKTILNRDGSVGC 429
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
++ + L P LYK+L + G+P + L +VD I + P D + + LK L++
Sbjct: 430 LITDEDLSDPLTLYKALNVVMKDGLPQRCLKSVDFIYMENTPLFHDFNGQRVLKELIEGG 489
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQEL--------------STGAYKLLPEGTRLVVSLR 523
V+ P+ + +P+ A+ +V+L +L + + L + +
Sbjct: 490 FQVLAPVDQLQEQPIKFAIGVVDLMKLEDFQRSQSSPNHPYAETRIDFTDKIANLAIRIT 549
Query: 524 GDESYEELEILKDID------------ATMILHDLPFNEDKIGRVQAARRLFEYLSENNL 571
G+E LE L I+ MI+ D+ + K+ V+ RR+F L +N
Sbjct: 550 GNEPDSYLEKLCSIERGISSKALGSGVPRMIILDI---DSKLNHVETVRRIFGILVKNGS 606
Query: 572 NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA--PGQDFDFLRDTSFNL 629
PV+H + +++VI T + L+D LG+G+++++ P + + D + ++
Sbjct: 607 KLPVVHMVDATECFDHEEVVINVSTALSTHLIDKLGEGVMIKSRLPLAESN---DIALSI 663
Query: 630 LQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMAD 689
LQ RMR+ KTE++SCPSCGRTLFD+Q+ + I+++ HLPGVSIAIMGCIVNG GEMAD
Sbjct: 664 LQAARMRSFKTEFISCPSCGRTLFDIQKTTESIKKRVGHLPGVSIAIMGCIVNGIGEMAD 723
Query: 690 ADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
ADFGYVGGAP K+DLYV K +V+R + +A D LI+LIK HG+W EP
Sbjct: 724 ADFGYVGGAPHKVDLYVKKELVERNVPDVEACDRLIELIKKHGKWVEP 771
>gi|71031182|ref|XP_765233.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Theileria
parva strain Muguga]
gi|68352189|gb|EAN32950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Theileria parva]
Length = 801
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 312/770 (40%), Positives = 446/770 (57%), Gaps = 97/770 (12%)
Query: 57 IAELQPASEGSPLLVPRQK-----YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT 111
IA P S L +++ YCE+++K R TR V +G V IG HPI +QTMT+
Sbjct: 41 IANFNPKKRDSRLFEKKEEDGDKTYCENVYKRERFPTRCVKIGKVTIGGNHPIAIQTMTS 100
Query: 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA 171
DT DV TV++++++ + G+D+VRITVQ RE + IK L N +IPL+AD HF
Sbjct: 101 CDTNDVQQTVDQILKVQEYGSDMVRITVQSPREVKSSELIKEKLNSLNCDIPLIADTHFN 160
Query: 172 PSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKY 230
VA+ A+ FDK+RVNPGN+ R ++ Y T++E++K ++IEEVF+PLV KCK+
Sbjct: 161 AKVAMLCADIFDKVRVNPGNYVIGRKNWDMKVYNTEEEFKKSGEYIEEVFTPLVLKCKEL 220
Query: 231 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMV 290
+A+RIGTNHGSLS R+MSYYGD+P GMV SA EFA ICRK DFHNF+FS+K+SN VM+
Sbjct: 221 KKAIRIGTNHGSLSSRVMSYYGDTPLGMVMSAIEFAEICRKNDFHNFVFSLKSSNIFVMI 280
Query: 291 QAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP 350
AYRLLV M GWDYP+HLGVTEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P
Sbjct: 281 HAYRLLVNIMKKRGWDYPIHLGVTEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDP 340
Query: 351 EKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFD-----------FQRRSGQLPIQKE 399
E+ PCR+L +L G + H + D F + E
Sbjct: 341 WFELIPCRKLLE---SVQKLYPGTKIIDTDHMNERDNVGEKLIPDKSFNYDDWRDFRSIE 397
Query: 400 GEEVDY------------RGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
EV+Y +L+ +GSV + L LYKSL +V G+P + L
Sbjct: 398 RREVNYGKSILNYEDSNKNNLLNPNGSVGTVLHSHHLNNRVELYKSLGLDIVNGLPSRSL 457
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTG 507
+VD + L ++P +++ + +K L++ + V+ PL + P+ A+ LV + E
Sbjct: 458 KSVDFVFLEDVPYFHEYNKQRLIKELIEGGINVVLPLRKLKYNPIKFAIGLVTVDE---- 513
Query: 508 AYKLLPEGT----------------------------------------------RLVVS 521
Y LL T +LVV
Sbjct: 514 -YNLLTRSTPKRYHNDNRSTNHPDSRLMGIDLNNEVPGQPILEDRDVVDELNKLEKLVVK 572
Query: 522 LRGDESYEELEILKDI---DATMILHDLPFNED----------KIGRVQAARRLFEYLSE 568
+ G+E+ ++L L + + T+ L++ N K+ + RR+F L++
Sbjct: 573 ITGNETDDQLLDLFNTHQRNETLNLNNKDRNNQIGFIILDIDPKLNYMYTVRRIFGLLNK 632
Query: 569 NNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFN 628
+ PVIH + FP+ ++ D+++ + +G L+D +G+G+++++ D S +
Sbjct: 633 TKCDLPVIHQLNFPSLENQQDMLVDSCCLLGCNLIDKMGEGIIIKSK-LPIDITNKLSLD 691
Query: 629 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMA 688
+LQ RMRN KT+++SCPSCGRTLF++QE + E+R + HLPGV+IAIMGCIVNG GEMA
Sbjct: 692 ILQNSRMRNIKTDFISCPSCGRTLFNIQETTEEVRRRIGHLPGVTIAIMGCIVNGIGEMA 751
Query: 689 DADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPP 738
DADFGYVGG+PGK+DLYV K +++R I +QA D LI+LIK H +W EPP
Sbjct: 752 DADFGYVGGSPGKVDLYVKKQLIERNIPKDQACDKLIELIKKHNKWVEPP 801
>gi|84994652|ref|XP_952048.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Theileria
annulata strain Ankara]
gi|65302209|emb|CAI74316.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase, putative
[Theileria annulata]
Length = 808
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 308/758 (40%), Positives = 443/758 (58%), Gaps = 107/758 (14%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+ YCE+++K R TR V +G V IG +PI +QTMT+ DT DV TV++++++ + G+D
Sbjct: 63 KTYCENVYKRERFPTRCVKIGKVTIGGNNPIAIQTMTSCDTNDVQQTVDQILKVQEYGSD 122
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRITVQ REA + IK L N +IPL+AD HF VA+ A+ FDK+RVNPGN+
Sbjct: 123 MVRITVQSPREAKSSELIKEKLSSLNCDIPLIADTHFNAKVAMLCADIFDKVRVNPGNYV 182
Query: 194 DRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
R ++ Y T++E++K ++IEE F+PLV KCK+ +A+RIGTNHGSLS R+MSYYG
Sbjct: 183 IGRKNWDMKVYNTEEEFKKSGEYIEEAFTPLVLKCKELKKAIRIGTNHGSLSSRVMSYYG 242
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMV SA EFA ICRK DFHNF+FS+K+SN VM+ AYRLLV M GWDYP+HLG
Sbjct: 243 DTPLGMVMSAIEFAEICRKNDFHNFVFSLKSSNIFVMIHAYRLLVNVMKKRGWDYPIHLG 302
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P E+ PCR+L +L
Sbjct: 303 VTEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDPWFELIPCRKLLE---SVQKLYP 359
Query: 373 GVAPFEEKHRH-------------YFDFQRRSGQLPIQKEGEEVDY-RGVLHRD------ 412
G + H F++ I++ EV+Y + VL +
Sbjct: 360 GTKIINTDNIHENNKDQDKIIPSTTFNYDDWRDFRSIER--REVNYGKSVLTYEDNNKNN 417
Query: 413 --------GSVLMSVSLDQLK--APEL--LYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
G+VL S L+ P+L LYKSL ++V G+P + L +VD +LL ++P
Sbjct: 418 LLNPNGSVGTVLNSHHLNNRVRIYPQLVELYKSLGLEIVKGLPSRSLKSVDFVLLEDVPF 477
Query: 461 VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT---- 516
+++ + +K L++ + V+ PL + P+ A+ LV + E Y +L T
Sbjct: 478 FHEYNKQRVIKELIEGGVNVVLPLRKLKYNPIKFAIGLVTVDE-----YNVLTRSTPKRF 532
Query: 517 ------------------------------------------RLVVSLRGDESYEELEIL 534
+LVV + G+E+ ++L L
Sbjct: 533 HNDSRINSHRDSRLIGIDLNEGDPGQSLLDDQDLLDELNKLEKLVVKITGNETDDQL--L 590
Query: 535 KDIDATMILHDLPFN---------------EDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
+ + L N + K+ + RR+F L++ + PVIH +
Sbjct: 591 DLFNTHQRIEKLNVNNKDRKNQIGFIILDIDPKLNYMYTVRRIFGLLNKTKSDLPVIHQL 650
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTK 639
FP+ ++ D+++ + +G L+D +G+G+++++ D S ++LQ RMRN K
Sbjct: 651 NFPSLENQQDMLVDSCCLLGCNLIDKMGEGIIIKSK-LPIDITNKLSLDILQNSRMRNIK 709
Query: 640 TEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
T+++SCPSCGRTLF++QE + E+R + HLPGV+IAIMGCIVNG GEMADADFGYVGG+P
Sbjct: 710 TDFISCPSCGRTLFNIQETTEEVRRRVGHLPGVTIAIMGCIVNGIGEMADADFGYVGGSP 769
Query: 700 GKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GK+DLYV K +++R I EQA D LI+LIK H +W EP
Sbjct: 770 GKVDLYVKKQLIERNIPKEQACDKLIELIKKHDKWVEP 807
>gi|171363681|dbj|BAG14389.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Perkinsus
marinus]
Length = 798
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/723 (43%), Positives = 427/723 (59%), Gaps = 52/723 (7%)
Query: 38 KSGR--RRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN 95
KSG+ +R + R + +S I P G + V YC+ + +RRKTRTVMVGN
Sbjct: 100 KSGKTPKRSGLARRAVAGASAIGRFDP---GPIMAVADLPYCKGVDHPIRRKTRTVMVGN 156
Query: 96 VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSL 155
V +GSEH + +QTM+ + T DV TV+++ R AD G D+VR+TVQG +EA A IK L
Sbjct: 157 VPVGSEHRLALQTMSNSSTDDVDATVKQIERCADAGIDIVRVTVQGIKEAHATKLIKERL 216
Query: 156 VQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQH 215
++ Y P+VADIHF P VA+ AE DKIR+NPGNF D F+++ E E Q
Sbjct: 217 LKDGYTTPIVADIHFKPKVAMLAAEACDKIRINPGNFIDGMKTFDKITEVTPEIAAEWQ- 275
Query: 216 IEEVFS---PLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272
EE+F PLVE K+ G+ +RIG NHGSLS+RI++ YGD+P GMV SA E +CR L
Sbjct: 276 -EEMFKTLKPLVESLKRQGKCMRIGVNHGSLSERILTQYGDTPEGMVASALEVGLMCRAL 334
Query: 273 DFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGT 332
DFHN +FSMK+SN VMV AYRLL AEM GWDYPLHLGVTEAG G DGR+KSAIGIG
Sbjct: 335 DFHNIIFSMKSSNTRVMVAAYRLLAAEMEKRGWDYPLHLGVTEAGGGSDGRIKSAIGIGA 394
Query: 333 LLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSG 392
LLQDGLGDT+RVSLTE P E+ PC L ++ + + + +H + +G
Sbjct: 395 LLQDGLGDTVRVSLTEDPWHEVGPCSALRDVYEES---------LKARPKHTSSNRSSAG 445
Query: 393 QL-----PIQKEGEEVDYRGV---LHRDGSVLMSVSLDQLKA--PELLYKSLAAKLVV-G 441
P E+D + LH+DGS+++ S ++ K E + K L KL G
Sbjct: 446 AAVADVDPYHFAKREIDTSAIDAPLHKDGSLILRYSPEEAKKNLKEYMTKGLGLKLRKDG 505
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
KD+ +VD +L+ ++ DA + + + V GV+ ++ + LP + +LV+
Sbjct: 506 RYQKDIGSVDVLLVE-----NETDADMDVLKAVQ-ETGVVILGTKNI---LPGSTLLVSE 556
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIG-RVQAAR 560
+ G +V S E+++ + + L F D RV A R
Sbjct: 557 PSMLDSVNPARAGGCACIV-----RSSEDVDKVLGHPKKGAVRFLIFKPDSAACRVHAGR 611
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHR-----DDLVIGAGTNVGALLVDGLGDGLLLEAP 615
++ + + ++ L P++ +P G + D VI + G+L VDGLGDG+ +
Sbjct: 612 QVAKAVRKSRL--PLLMWFTYPEGDSKAKAGSDAAVILGASEFGSLFVDGLGDGIFWDDR 669
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
G + RD NL+QG RMR +KTE++SCPSCGRTLFDLQ+ + IR+KT HL G+ IA
Sbjct: 670 GLTTEETRDVGLNLMQGSRMRLSKTEFISCPSCGRTLFDLQDTTERIRKKTGHLSGLRIA 729
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
+MGC+VNGPGEMADADFGYVG PGK+DLYVGK V+R + ++A D L+ LIK G W
Sbjct: 730 VMGCVVNGPGEMADADFGYVGSLPGKVDLYVGKQCVRRAVDYDKAEDVLVDLIKSEGLWV 789
Query: 736 EPP 738
+PP
Sbjct: 790 DPP 792
>gi|294879242|ref|XP_002768617.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Perkinsus marinus ATCC 50983]
gi|239871288|gb|EER01335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Perkinsus marinus ATCC 50983]
Length = 798
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 303/683 (44%), Positives = 410/683 (60%), Gaps = 47/683 (6%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC+ + +RRKTRTVMVGNV +GSEH + +QTM+ + T DV TV+++ R AD G D+V
Sbjct: 137 YCKGVDHPIRRKTRTVMVGNVPVGSEHRLALQTMSNSSTDDVDATVKQIERCADAGIDIV 196
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQG +EA A IK L++ Y P+VADIHF P VA+ AE DKIR+NPGNF D
Sbjct: 197 RVTVQGIKEAHATKLIKERLLKDGYTTPIVADIHFKPKVAMLAAEACDKIRINPGNFIDG 256
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFS---PLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
F+++ E E Q EE+F PLVE K+ G+ +RIG NHGSLS+RI++ YG
Sbjct: 257 MKTFDKITEVTPEIAAEWQ--EEMFKTLKPLVESLKRQGKCMRIGVNHGSLSERILTQYG 314
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMV SA E +CR LDFHN +FSMK+SN VMV AYRLL AEM GWDYPLHLG
Sbjct: 315 DTPEGMVASALEVGLMCRALDFHNIIFSMKSSNTRVMVAAYRLLAAEMEKRGWDYPLHLG 374
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG G DGR+KSAIGIG LLQDGLGDT+RVSLTE P E+ PC L ++ +
Sbjct: 375 VTEAGGGSDGRIKSAIGIGALLQDGLGDTVRVSLTEDPWHEVGPCSALRDVYEES----- 429
Query: 373 GVAPFEEKHRHYFDFQRRSGQL-----PIQKEGEEVDYRGV---LHRDGSVLMSVSLDQL 424
+ + +H + +G P E+D + LH+DGS+++ S ++
Sbjct: 430 ----LKARPKHTSSNRSSAGAAVADVDPYHFAKREIDTSAIDAPLHKDGSLILRYSPEEA 485
Query: 425 KA--PELLYKSLAAKLVV-GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
K E + K L KL G KD+ +VD +L+ ++ DA + + + V GV+
Sbjct: 486 KKNLKEYMTKGLGLKLRKDGRYQKDIGSVDVLLVE-----NETDADMDVLKAVQ-ETGVV 539
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
++ + LP + +LV+ + G +V S E+++ +
Sbjct: 540 ILGTKNI---LPGSTLLVSEPSMLDSVNPARAGGCACIV-----RSSEDVDKVLGHPKKG 591
Query: 542 ILHDLPFNEDKIG-RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR-----DDLVIGAG 595
+ L F D RV A R++ + ++ L P++ +P G + D VI
Sbjct: 592 AVRFLIFKPDSAACRVHAGRQVARAVRKSRL--PLLVWFTYPEGDSKAKAGSDAAVILGA 649
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
+ G+L VDGLGDG+ + G + RD NL+QG RMR +KTE++SCPSCGRTLFDL
Sbjct: 650 SEFGSLFVDGLGDGIFWDDRGLTTEETRDVGLNLMQGSRMRLSKTEFISCPSCGRTLFDL 709
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
Q+ + IR+KT HL G+ IA+MGC+VNGPGEMADADFGYVG PGK+DLYVGK V+R +
Sbjct: 710 QDTTERIRKKTGHLSGLRIAVMGCVVNGPGEMADADFGYVGSLPGKVDLYVGKQCVRRAV 769
Query: 716 AMEQATDALIQLIKDHGRWAEPP 738
++A D L+ LIK G W +PP
Sbjct: 770 DYDKAEDVLVDLIKSEGLWVDPP 792
>gi|373952788|ref|ZP_09612748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Mucilaginibacter paludis DSM 18603]
gi|373889388|gb|EHQ25285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Mucilaginibacter paludis DSM 18603]
Length = 693
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/706 (43%), Positives = 404/706 (57%), Gaps = 71/706 (10%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + R TR V +G+V +G +PIR+Q+MTT +T D GTVE+ +R+ D G + V
Sbjct: 13 YCNSLTEYSRFVTREVTIGDVPMGGNNPIRIQSMTTTNTMDTLGTVEQSIRMVDAGCEYV 72
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA EIK L ++ Y +PLVADIHF P+ A A +K+RVNPGN+AD+
Sbjct: 73 RITAPSIKEAQNLAEIKKELRKRGYTVPLVADIHFTPNAAEVAARIVEKVRVNPGNYADK 132
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QLEYT EYQ EL I + F+PLV+ CK+YG A+RIGTNHGSLSDRIMS YGD+P
Sbjct: 133 K-KFDQLEYTPAEYQAELDRIYQKFAPLVKICKEYGTAMRIGTNHGSLSDRIMSQYGDTP 191
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
RGMVESA EF R+C L+++N + SMK+SNP VMVQAYR+LV M G +YPLHLGVTE
Sbjct: 192 RGMVESAMEFMRMCEALNYYNLVISMKSSNPQVMVQAYRMLVETMVAEGMNYPLHLGVTE 251
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN----LGMRAAELQ 371
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E L N G R L+
Sbjct: 252 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEYESPVAIALVNRYFVRGQRGGSLE 311
Query: 372 QGV---APFEEKHRHYFDFQ-----RRSGQL----PIQKEGEEVDYRGVL--HRDGSVLM 417
GV P H Q ++ +L P+ + + + H V++
Sbjct: 312 SGVLSLEPVGSSHNSGLTTQDSRLETQNSELKTPDPVTERRHTYEANAFIGGHMVPRVVV 371
Query: 418 SVSLDQLKAPELLYKS--LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLAL----- 470
+S LK P +L + L ++L+ + + L +LPS + L
Sbjct: 372 DLSAKNLKDPAVLNDAGYLYSELLDKYNMAEQSVDFVYLANQLPSFNFPGNLKQLYNYET 431
Query: 471 -KRLVD-ISMGVITPLSEQLT---KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGD 525
K L D + + LSE ++ + +V+V +L T + LLP LV L
Sbjct: 432 WKTLTDKTNCHPVYNLSEYISATERDYALNLVIVKPGDLETDDFGLLPLNNTLVFVLE-- 489
Query: 526 ESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGI 585
D I +Q R F L E L+ PVI +P
Sbjct: 490 ------------------------TDAINGMQDQRGFFFKLQELGLDVPVIIKRTYPENE 525
Query: 586 HR--------------DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQ 631
L + A T++GALLVDGLGDG+ ++AP + T+F +LQ
Sbjct: 526 FDLSKYGDITSPEEPVSKLQLYAATDMGALLVDGLGDGIWIDAPSIPVKTITSTAFGILQ 585
Query: 632 GCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADAD 691
R R +KTEY+SCPSCGRTLFDLQE + IR +TSHL G+ I IMGCIVNGPGEMADAD
Sbjct: 586 ATRSRISKTEYISCPSCGRTLFDLQETTQMIRSRTSHLKGLKIGIMGCIVNGPGEMADAD 645
Query: 692 FGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+GYVG P KI LY GK VV++ ++ A D LI +IK G W EP
Sbjct: 646 YGYVGAGPDKITLYRGKEVVQKNVSAANALDQLIGIIKGDGNWIEP 691
>gi|387791950|ref|YP_006257015.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Solitalea
canadensis DSM 3403]
gi|379654783|gb|AFD07839.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Solitalea
canadensis DSM 3403]
Length = 670
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/702 (44%), Positives = 415/702 (59%), Gaps = 49/702 (6%)
Query: 52 NSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT 111
NS+ DI +++ + KYC S+ R TR V +G++A+G+ HPIR+Q+MTT
Sbjct: 2 NSAVDINQIKAL---------KGKYCNSLTTYSRFITREVTIGDIAMGAHHPIRIQSMTT 52
Query: 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA 171
DT D TVE+ +R+ D G + VRIT +EA EIK L + YN+PL+ADIHF
Sbjct: 53 TDTMDTLATVEQTIRMVDAGCEYVRITAPSMKEAQNLAEIKKELRHRGYNVPLIADIHFT 112
Query: 172 PSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231
P+ A A +K+RVNPGN+ D++ +F+Q++YTD EY++E++ I + FSPLV CK+YG
Sbjct: 113 PNAAELAARIVEKVRVNPGNYIDKK-KFQQIDYTDLEYEQEVERIRKRFSPLVSICKEYG 171
Query: 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQ 291
A+RIGTNHGSLSDRIMS YGD+P GMVESA EF RIC LD+HN + SMKASNP VMVQ
Sbjct: 172 TAMRIGTNHGSLSDRIMSRYGDTPIGMVESAMEFIRICSDLDYHNLVISMKASNPKVMVQ 231
Query: 292 AYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE 351
AYR+LV +M G +YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE
Sbjct: 232 AYRMLVEKMVAEGMNYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEEPE 291
Query: 352 KEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLH 410
E + LA+ R + Q + F + +F S Q +++ EV G H
Sbjct: 292 YEAPVAKALADRYAKRTHLIDQSASEFIPDVQFPSNFDPYSYQ---RRKTHEVQNIGG-H 347
Query: 411 RDGSVLMSVSLDQLKAPELL------YKSLAAKLVVGMPFKDLATV-DSILLRELPSVDD 463
V++ +S LK P +L Y ++ K + D A + DS+ P
Sbjct: 348 NVPRVIVDLSQQNLKDPFVLSSIGYNYSAVLDKYNLTEQTADFAYLGDSLPSFSFPG--- 404
Query: 464 HDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELST------GAYKLLPEGTR 517
LK+L + S + +Q P+ +N +E T A +L E T
Sbjct: 405 -----NLKQLYNYSTWK-SLKDQQNAHPVFSVEEYINAEERDTQLNFIKAAISVLFEST- 457
Query: 518 LVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIH 577
++ Y D T++ L + I + R+ L L+ PVI
Sbjct: 458 -------EQIYNAFIKALSADKTLV---LILETNSIHGMAEQRQFIFDLMIQQLDIPVII 507
Query: 578 HIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRN 637
+ + + +D + A T+VGALL DGLGDGL ++ + T+F +LQ R R
Sbjct: 508 KRIYAD-VSEEDFQLEASTDVGALLTDGLGDGLWIQCDSVSSKVINSTAFGILQATRTRI 566
Query: 638 TKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
+KTEY+SCPSCGRTLFDLQE + IR +T HL G+ I IMGCIVNGPGEMADAD+GYVG
Sbjct: 567 SKTEYISCPSCGRTLFDLQETTQLIRSRTDHLKGIKIGIMGCIVNGPGEMADADYGYVGT 626
Query: 698 APGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPA 739
PG I LY K VVKR +A E A D LI LIK++G W +P A
Sbjct: 627 GPGVITLYKEKEVVKRNVAAEHAVDELINLIKENGDWVDPVA 668
>gi|399217680|emb|CCF74567.1| unnamed protein product [Babesia microti strain RI]
Length = 709
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 309/694 (44%), Positives = 429/694 (61%), Gaps = 48/694 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC+S R TR V +GNV IG +PI +QTMT++DT +V TV++++R AD GA +
Sbjct: 35 KYCQSTVVYKRHPTRPVKIGNVTIGGNNPIAIQTMTSSDTANVPDTVDQILRCADAGASI 94
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQ REA A EIK+ L+ N +IPLVADIHF P +AL A+ FDK+R+NPGNF D
Sbjct: 95 VRLTVQSPREAKASHEIKDRLLAMNCHIPLVADIHFNPKIALLAADVFDKVRINPGNFTD 154
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R ++ Y T+ E+ + + I + +PL+EKCK+ GRA+RIGTNHGSLS RI+SYYGD
Sbjct: 155 GRKTWDNKVYNTEAEFLEGGERIRQDVAPLIEKCKRLGRAIRIGTNHGSLSSRILSYYGD 214
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA E A+IC ++DFH+ +FSMK+SN VMV +YRLL +EMY G++YP+HLGV
Sbjct: 215 TPRGMVESALEVAKICVEMDFHDIVFSMKSSNVNVMVHSYRLLASEMYKRGYNYPIHLGV 274
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ-Q 372
TEAG G DGR+KS +GIG LL DGLGDTIR+SLTE P EI PC++L N + L+ +
Sbjct: 275 TEAGLGTDGRIKSTLGIGLLLLDGLGDTIRMSLTEDPWHEIAPCKQLLN---HISTLRTK 331
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
V F E HR + + RR+ K G+ +L++DG+V +S + + P LY
Sbjct: 332 KVEDFVEMHRDFTNIARRNLDYTQNKIGDN-----ILNKDGTVAVSTPISEFADPINLYN 386
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARL--ALKRLVDISMGVITPLSEQLTK 490
SL +LV G+P K L + D I +PS++ H K L + + ++ + +
Sbjct: 387 SLGLELVNGIPRKTLNSADMIY---IPSLNPHSLSYGRTFKELAEAGVSLLANYDDLIKY 443
Query: 491 PLPHAMVLVNLQ--ELSTGAYKL--LPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
+P A+ L++L LST + L + +RG+E + ++ + + DL
Sbjct: 444 RIPQAIPLIDLDSPNLSTNFQCISDLNHRGHFAMRIRGNEDIHTFKQNSKLNPSFFVVDL 503
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
P + D I RR+ + E L+ P+I +I P + +I A LVD +
Sbjct: 504 PIDGDII---STHRRVMNIVCELELSQPIIFYI--PRQLCG---IIPITLAASAPLVDKM 555
Query: 607 GDGLLLEAPGQD------FDFLRDT--SFN------LLQGCRMRNTKTEYVSCPSCGRTL 652
+GLLL D L+ S N L+QG RMR+ KT++VSCPSCGRTL
Sbjct: 556 AEGLLLHIDSVSSSRKLALDILQVIIHSINIPNGIILIQGARMRSFKTDFVSCPSCGRTL 615
Query: 653 FDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK-------IDLY 705
FD+Q+ + +I+E+ HLPGV+IA+MGCIVNG GEM DADFGYVGGA GK +DLY
Sbjct: 616 FDIQDTTKKIKERMGHLPGVTIAVMGCIVNGIGEMGDADFGYVGGARGKVGPLPIQVDLY 675
Query: 706 VGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPA 739
GK +V+R + E++ D L QLI++ GRW +PP
Sbjct: 676 KGKELVERSVPTEKSFDRLEQLIRESGRWVDPPG 709
>gi|68076781|ref|XP_680310.1| GcpE protein [Plasmodium berghei strain ANKA]
gi|56501223|emb|CAH98435.1| GcpE protein, putative [Plasmodium berghei]
Length = 819
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 297/765 (38%), Positives = 440/765 (57%), Gaps = 74/765 (9%)
Query: 34 FRKFKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMV 93
F K K ++ + +N I +++ + L+ +KYCE + R TR V +
Sbjct: 68 FGKIKKKMNFNSLSSDENNDYESIKKIETDEDKYNLIKNIKKYCECTKRYKRLPTREVKI 127
Query: 94 GNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKN 153
GN+ IG + I +QTMT+ DT++V V ++ R GADLVR+TVQG +E +A + IK+
Sbjct: 128 GNIKIGGNNKISIQTMTSCDTRNVEECVNQIKRCKGLGADLVRLTVQGVQEVEASYRIKD 187
Query: 154 SLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKEL 213
L+ +N IPLVADIHF P +AL AE FDKIRVNPGN+ D R ++ Y E++
Sbjct: 188 MLLSQNITIPLVADIHFNPKIALMAAEVFDKIRVNPGNYVDGRKKWVDKVYKKKEFEDGK 247
Query: 214 QHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273
I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +
Sbjct: 248 LFIKEKFVPLIEKCKQLNRAIRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDLCIENN 307
Query: 274 FHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKSAIGIG 331
F N ++SMKASN VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS +GIG
Sbjct: 308 FFNIVYSMKASNAYVMIQSYRLLVAKQYEKGNDVLFPIHLGVTEAGFGDNGRIKSYLGIG 367
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
+LL DG+GDTIR+SLTE P +E+ PC++L L++ + +++ YF Q +
Sbjct: 368 SLLYDGIGDTIRISLTEDPWEELHPCKKL------IENLKKRIFYTDQQDSSYFTDQNKG 421
Query: 392 GQLPIQKEGEE---VDYRGV---------------------LHRDGSVLMSVSLDQLKAP 427
PI K +D+ +H + ++ +V++ +L+
Sbjct: 422 KNNPITKRNNRYTTLDFHNFNETFRNFNNIVKRKVVKKKNVMHEECTIGNAVTVKELEDS 481
Query: 428 ELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT---P 483
++K L +L K A T D I++ + ++ + A+ ++++L++ + V+ P
Sbjct: 482 LQIFKDLNLELDKNGNLKKGAKTTDIIIINDFENLTNA-AKKSVEKLMEAGLHVLIEYGP 540
Query: 484 LSEQLTKPL----PHAMVLVNLQELSTGAY--KLLPEGTR----------LVVSLRGDES 527
S +L K L P+ N+ ST Y LL + + ++ L G E
Sbjct: 541 KSVELLKNLKVNEPNKQ---NILYYSTLTYILDLLEKNNKDGIEHNNVKGYIIILNGKED 597
Query: 528 YEELEILKDIDATMILHDLPFNEDKI-GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIH 586
+ +E +KD++ + L D I V RRL E L N++ P IH+ + +
Sbjct: 598 IKAIEKIKDLNPQPLFFILK--PDNIYEHVLVTRRLNEILHTLNIDIPYIHYANIDSN-N 654
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT--------------SFNLLQG 632
DD+++ + VG L+D +GDGL++ + ++ + N+LQ
Sbjct: 655 YDDILVNSAVYVGTCLIDLMGDGLIVNVTDNNITAKKEQNEQIKTRVALNSFLTLNILQD 714
Query: 633 CRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADF 692
R+R KT+Y+SCPSCGRTLF++QE + +I + T HL GV IA+MGCIVNG GEMADA F
Sbjct: 715 TRIRLFKTDYISCPSCGRTLFNIQETTKKIMKLTGHLKGVKIAVMGCIVNGIGEMADAHF 774
Query: 693 GYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GYVG AP KIDLY GK +V R I E+A D LI+LIK H +W +P
Sbjct: 775 GYVGSAPKKIDLYYGKELVHRNIPEEEACDRLIELIKKHNKWEDP 819
>gi|325104952|ref|YP_004274606.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
saltans DSM 12145]
gi|324973800|gb|ADY52784.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
saltans DSM 12145]
Length = 659
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 306/698 (43%), Positives = 401/698 (57%), Gaps = 84/698 (12%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC SI + R +T V VGN+ +G+ +PIR+Q+MTT DT D G+V + +R+ D G +
Sbjct: 9 QRYCNSITEYSRFETVEVKVGNLLLGAHNPIRLQSMTTVDTMDTEGSVAQSIRMIDAGCE 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA I+ L K Y PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 69 LVRITAPSIKEAKNLANIRKELDAKGYPTPLVADIHFTPNAAEEAAKHIEKVRVNPGNYA 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE++ YT + Y+KEL+ I+ F+PLV+ CK+ G A+RIGTNHGSLSDRIMS+YGD
Sbjct: 129 DKK-KFEEINYTPEAYKKELERIKSKFAPLVQICKENGTAMRIGTNHGSLSDRIMSWYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P+GMVESA EF RICR+LD+H + SMK+SNP VMVQAYRLLV M +YPLHLGV
Sbjct: 188 TPKGMVESAMEFIRICRELDYHQLVVSMKSSNPQVMVQAYRLLVHTMMQENMNYPLHLGV 247
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ-- 371
TEAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE EI R LA +L
Sbjct: 248 TEAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEEPEFEIPVARVLAERYHEREKLDTE 307
Query: 372 ----------QGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
Q +PFE + R + G H+ V++ +S
Sbjct: 308 INGAGDVIVPQDFSPFEYRKRESTELNTFIGG----------------HQVPRVILDISK 351
Query: 422 DQLKAPELL------YKSLAAKLVVGMPFKDLATVDSILLRELPSVD---------DHDA 466
LK P +L Y ++ K +G D A L +LPS + D+
Sbjct: 352 QNLKDPFVLADAGYVYSAVLDKYNMGDQSIDFA----YLGDQLPSFNFPGNLKQLYDYST 407
Query: 467 RLALKRLVDISMGVITPLSEQLTKPLPHA---MVLVNLQELSTGAYKLLPEGTRLVVSLR 523
L L++ + + L E ++ A +V V+ L T + +P LV L
Sbjct: 408 WLTLQKKYNCH--PLFTLEEYVSAQKRDAALNLVRVSRSNLYTDDFANIPFDHTLVFVLE 465
Query: 524 GDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVI--HHIQF 581
DE + + R F L E +N PVI +F
Sbjct: 466 TDE--------------------------VHGMADQRAFFFKLLEAGINTPVIVKRSYRF 499
Query: 582 PNGIHRD-DLV--IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
+ +D DL + A T++GALL+DG GDG+ ++AP F T+F +LQ R R +
Sbjct: 500 GDANQKDIDLKTQLYAATDLGALLLDGFGDGIWIDAPQISLKFNVSTAFGILQATRSRIS 559
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
KTEY+SCPSCGRTLFDLQE + IR KT HL G+ I IMGCIVNGPGEMADAD+GYVG
Sbjct: 560 KTEYISCPSCGRTLFDLQETTQMIRSKTDHLKGIKIGIMGCIVNGPGEMADADYGYVGAG 619
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
P KI LY GK VVK+ + A D LI +I+ G W E
Sbjct: 620 PDKITLYRGKEVVKKNVPSANALDELIDIIRTDGIWIE 657
>gi|83273569|ref|XP_729456.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Plasmodium
yoelii yoelii 17XNL]
gi|23487311|gb|EAA21021.1| GcpE [Plasmodium yoelii yoelii]
Length = 826
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 296/746 (39%), Positives = 445/746 (59%), Gaps = 65/746 (8%)
Query: 50 SSNSSSD---IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRV 106
SS+ +SD I +++ + L+ +KYCE + R TR V +GN+ IG + I +
Sbjct: 88 SSDENSDYESIQKIETDEDKYNLIKNIKKYCECTKRYKRLPTREVKIGNIKIGGNNRISI 147
Query: 107 QTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA 166
QTMT+ DT++V V ++ R D GADLVR+TVQG +E +A + IK+ L+ +N IPLVA
Sbjct: 148 QTMTSCDTRNVEECVNQIKRCKDLGADLVRLTVQGVQEVEASYRIKDMLLSQNITIPLVA 207
Query: 167 DIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEK 226
DIHF P +AL AE +DKIRVNPGN+ D R ++ Y E++ I+E F PL+EK
Sbjct: 208 DIHFNPKIALMAAEVYDKIRVNPGNYVDGRKKWVDKVYKKKEFEDGKLFIKEKFVPLIEK 267
Query: 227 CKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286
CK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F N ++SMKASN
Sbjct: 268 CKQLNRAIRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDLCIENNFFNIVYSMKASNA 327
Query: 287 VVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRV 344
VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+
Sbjct: 328 YVMIQSYRLLVAKQYEKGNDIFFPIHLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRI 387
Query: 345 SLTEPPEKEIDPCRRL-ANLGMRAAEL-QQGVAPFEEKHR------------------HY 384
SLTE P +E+ PC++L NL R QQ F E+++ H
Sbjct: 388 SLTEDPWEELHPCKKLIENLKKRIFYTDQQNSNYFTEQNKENNNATTNRNNRYTTLDFHN 447
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
F+ R+ ++++ V + VLH + ++ +V++ +L+ ++K L +L
Sbjct: 448 FNETFRNFNNIVKRQV--VKKKNVLHEECTIGNAVTVKELEDSLQIFKDLNLELDKNGNL 505
Query: 445 KDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT---PLSEQLTKPLP------- 493
K A T D I++ + ++ + A+ ++++L++ + V+ P S +L K L
Sbjct: 506 KKGAKTTDIIIINDFENLTNV-AKKSVEKLMEAGLHVLVEYGPKSVELIKNLKVNELNKQ 564
Query: 494 ---HAMVLVNLQEL-----STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD 545
+ L ++ +L + G + +G ++ L G E + +E +KD++ +
Sbjct: 565 NILYYSTLTDILDLLEKNKTDGIEQNNVKGYAII--LNGKEDIKVIEKIKDLNPQPLFFI 622
Query: 546 LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
L +++ V RRL E L +++ P IH+ + I+ DD+++ + VG L+D
Sbjct: 623 LK-SDNIYEHVLVTRRLNEILHTLDIDIPYIHYANIDSNIY-DDILVNSTVYVGTCLIDL 680
Query: 606 LGDGLLLEAPGQDFDFLRDT--------------SFNLLQGCRMRNTKTEYVSCPSCGRT 651
+GDGL++ + ++ + N+LQ R+R KT+Y+SCPSCGRT
Sbjct: 681 MGDGLIVNVTDNNITAKKEQNEQIKTRVALNSFLTLNILQDTRIRLFKTDYISCPSCGRT 740
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LF++QE + +I + T HL GV IA+MGCIVNG GEMADA FGYVG P KIDLY GK +V
Sbjct: 741 LFNIQETTKKIMKLTGHLKGVKIAVMGCIVNGIGEMADAHFGYVGSGPKKIDLYYGKELV 800
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
R I E+A D LI+LIK H +W +P
Sbjct: 801 HRNIPEEEACDRLIELIKKHNKWEDP 826
>gi|110638588|ref|YP_678797.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cytophaga
hutchinsonii ATCC 33406]
gi|110281269|gb|ABG59455.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cytophaga
hutchinsonii ATCC 33406]
Length = 665
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 306/696 (43%), Positives = 414/696 (59%), Gaps = 73/696 (10%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S+ + VRRK+ V +G V +G ++PIR+Q+MTT DT D G+VE+++R+ + G +
Sbjct: 12 KYCSSLTQYVRRKSSVVTIGKVPMGGDYPIRLQSMTTVDTMDTMGSVEQIIRMVEAGCEY 71
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+T +EA IKN L+++ Y++PLVADIHF P+ A A+ +K+R+NPGN+AD
Sbjct: 72 VRVTAPSVKEAQNLENIKNELLKRGYDVPLVADIHFTPNAAELAAKIVEKVRINPGNYAD 131
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE +EYTD YQ+EL+ I E F PLV+ CK+YG A+RIGTNHGSLSDRI+S YGD+
Sbjct: 132 KK-KFEVIEYTDASYQEELERIREKFIPLVKICKEYGTAMRIGTNHGSLSDRILSRYGDT 190
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHLGV 313
P GMVESA EF RIC L+++N + SMKASN VMVQAYRLLV ++ G YPLHLGV
Sbjct: 191 PLGMVESALEFLRICEDLEYYNIVISMKASNTQVMVQAYRLLVQKLEEEGLRPYPLHLGV 250
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE EI ++L + R + ++
Sbjct: 251 TEAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEFEIPVAQKLVD---RYIDRKKH 307
Query: 374 VA-PFEEKHR-HYFDFQRRS-------GQLPIQK--------EGEEV-DYRGVLHRDGSV 415
A PF EK+ + + ++RR+ G L + + E EV D + + H
Sbjct: 308 AAIPFVEKNPINPYSYKRRTTTDVHTIGGLNVPRVIADFSDVESLEVQDLKSIGHFYLPA 367
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
L S++ L A + +Y PF LP+ LK +VD
Sbjct: 368 LDKWSMNDLGA-DFIYTGKNKA-----PFM------------LPN--------GLKEIVD 401
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
+ L++Q H L + T K P+ +V + + L +
Sbjct: 402 ADTWKV--LTDQ-----THVFPLFMARWYKTDVVK-HPQLNFVVADIEDVDDALLLRLAS 453
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D A +IL FNE + + RR F L + PVI + + + + L + A
Sbjct: 454 DTTAVLILES--FNEHAMAEL---RRSFITLMNREIATPVIIKRAYTHK-NEETLFLAAS 507
Query: 596 TNVGALLVDGLGDGLLL----------EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
T+ G LLVDGLGDG+ L EA + + F +LQ R R TKTEY+SC
Sbjct: 508 TDAGGLLVDGLGDGIFLSSEKMILAEKEALLAYLKSVNNLGFGILQAARTRMTKTEYISC 567
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
PSCGRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY
Sbjct: 568 PSCGRTLFDLQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGVGKDKIALY 627
Query: 706 VGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
G+TVV + + ++A D LI +IK+ G+W EP E
Sbjct: 628 RGQTVVNKAVHSDKAVDELINIIKEDGKWLEPVVSE 663
>gi|300772120|ref|ZP_07081990.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33861]
gi|300760423|gb|EFK57249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 675
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 400/683 (58%), Gaps = 51/683 (7%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S R TR V +G++ +G +PIR+Q+MTT DT D G+VE+ +R+ D G + V
Sbjct: 16 YCNSKTDYSRWVTREVNIGDIPMGGNNPIRIQSMTTIDTMDTMGSVEQTIRMVDAGCEYV 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L + YN+PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 76 RITAPSIKEAENLANIKKELRNRGYNVPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QL Y+ DEYQ EL I + F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+P
Sbjct: 136 K-KFDQLSYSADEYQAELDRIYKKFTPLVSICKEYGTAMRIGTNHGSLSDRIMSHYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RIC L+F+N SMK+SNP VMVQAYR+LV +M + +YPLHLGVTE
Sbjct: 195 EGMVESALEFIRICEDLNFYNLTISMKSSNPQVMVQAYRMLVEKMVIENMNYPLHLGVTE 254
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGV 374
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE L N RA LQ
Sbjct: 255 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEKEAPVAIALVNRYSKRAKMLQDAT 314
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL---- 430
E Q + E EV+ V++ +S LK P +L
Sbjct: 315 TQSREI------IQLNPSSETVAYESREVNTFIGGSLVPRVIVDISTSNLKDPNILTATG 368
Query: 431 --YKSLAAKLVVGMPFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
Y L K +G +VD + L +LPS LK+L +
Sbjct: 369 YRYDILNDKYHMGE-----QSVDFVFLGDQLPS---FTMPGNLKQLYN--------YKTW 412
Query: 488 LTKPLPHAM-VLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
LT P + + +L++ + + K + ++ ++ ++ E+ ID T++
Sbjct: 413 LTIANPTNIHPVFDLEQFNAASRK---DPVLNLIYIKNNDLESEIFGNSAIDNTVVFI-- 467
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFP----NGIHRD---------DLVIG 593
D I + R+ F L E L+ PVI +P +G D + +
Sbjct: 468 -LETDHIHGMADQRQFFANLQEIGLDNPVIIKRSYPAEEFSGPVGDIMNPEEPISKIQLY 526
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A T++GALL+D LG G+ +++P D L SF +LQ R R +KTEY+SCPSCGRTLF
Sbjct: 527 AATDLGALLIDKLGSGIWVDSPATPIDRLVSLSFGILQATRSRISKTEYISCPSCGRTLF 586
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
DLQ+ + IR +T+HL G+ IAIMGCIVNGPGEMADAD+GYVG P KI LY GK VVK+
Sbjct: 587 DLQDTTQMIRARTNHLKGLKIAIMGCIVNGPGEMADADYGYVGAGPDKITLYRGKEVVKK 646
Query: 714 GIAMEQATDALIQLIKDHGRWAE 736
++ A D LI +IK G W E
Sbjct: 647 NVSSANALDELIDIIKGDGLWIE 669
>gi|227536149|ref|ZP_03966198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33300]
gi|227244046|gb|EEI94061.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33300]
Length = 675
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 299/683 (43%), Positives = 403/683 (59%), Gaps = 51/683 (7%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S R TR V +G++ +G +PIR+Q+MTT DT D G+VE+ +R+ D G + V
Sbjct: 16 YCNSKTDYSRWVTREVNIGDIPMGGNNPIRIQSMTTIDTMDTMGSVEQTIRMVDAGCEYV 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L + YN+PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 76 RITAPSIKEAENLANIKKELRNRGYNVPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QL Y+ +EYQ EL I + F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+P
Sbjct: 136 K-KFDQLSYSANEYQAELDRIYKKFAPLVSICKEYGTAMRIGTNHGSLSDRIMSHYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RIC L+F+N SMK+SNP VMVQAYR+LV +M + +YPLHLGVTE
Sbjct: 195 EGMVESALEFIRICEDLNFYNLTISMKSSNPQVMVQAYRMLVEKMVIENMNYPLHLGVTE 254
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGV 374
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE L N RA LQ+
Sbjct: 255 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEKEAPVAIALVNRYSKRAKMLQEAA 314
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL---- 430
E Q + E +EV+ V++ +S LK P +L
Sbjct: 315 IQSREI------IQLNPSSETVAYESKEVNTFIGGSLVPRVIVDISASNLKDPNILTATG 368
Query: 431 --YKSLAAKLVVGMPFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
Y L K +G +VD + L +LPS LK+L + +
Sbjct: 369 YRYDILNDKYHMGE-----QSVDFVFLGDQLPS---FTMPGNLKQLYN--------YNTW 412
Query: 488 LTKPLPHAM-VLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
LT P + + +L++ + + K + ++ ++ ++ E+ ID T++
Sbjct: 413 LTIANPTNIHPVFDLEQFNAASRK---DPVLNLIYIKNNDLESEIFGNSAIDNTVV---F 466
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFP----NGIHRD---------DLVIG 593
D I + R+ F L E L+ PVI +P +G D + +
Sbjct: 467 VLETDHIHGMADQRQFFANLQEIGLDNPVIIKRSYPSEEFSGPVGDIMNPEEPISKIQLY 526
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A T++GALL+D LG G+ +++P D L SF +LQ R R +KTEY+SCPSCGRTLF
Sbjct: 527 AATDLGALLIDKLGSGIWVDSPATPIDKLVSLSFGILQATRSRISKTEYISCPSCGRTLF 586
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
DLQ+ + IR +T+HL G+ IAIMGCIVNGPGEMADAD+GYVG P KI LY GK VVK+
Sbjct: 587 DLQDTTQMIRARTNHLKGLKIAIMGCIVNGPGEMADADYGYVGAGPDKITLYRGKEVVKK 646
Query: 714 GIAMEQATDALIQLIKDHGRWAE 736
++ A D LI +IK G W E
Sbjct: 647 NVSSANALDELIDIIKGDGLWIE 669
>gi|327403526|ref|YP_004344364.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fluviicola
taffensis DSM 16823]
gi|327319034|gb|AEA43526.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fluviicola
taffensis DSM 16823]
Length = 644
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 294/676 (43%), Positives = 402/676 (59%), Gaps = 62/676 (9%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+C + R +TR V VG IG ++PIR+Q+MTT D+ D AG++++ +R+ D G +LV
Sbjct: 15 FCTDLFHRERFETREVKVGITTIGGKNPIRIQSMTTTDSMDTAGSIDQSIRMIDAGCELV 74
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+T K+EA+ IK LV++ YN PLVADIHF P+ A A+ +K+RVNPGN+AD+
Sbjct: 75 RLTAPSKKEAENLRVIKKELVKRGYNTPLVADIHFTPNAAEIAAKHIEKVRVNPGNYADK 134
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE+++YT++ YQ EL IE+ F+PLV CK++ A+RIGTNHGSLSDRI+S +GD+P
Sbjct: 135 K-KFEEIDYTEESYQAELIRIEKKFTPLVLLCKEHQTAMRIGTNHGSLSDRILSRFGDTP 193
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMV+SA EF ICRK D+H + SMKASN +VMVQAYRLLV M G +YPLHLGVTE
Sbjct: 194 EGMVQSAMEFIHICRKNDYHELVISMKASNTLVMVQAYRLLVKTMKEQGMNYPLHLGVTE 253
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG+GEDGR+KSA+GIG LL+DGLGDTIRVSLTE PE EI ++LA
Sbjct: 254 AGDGEDGRIKSAVGIGALLEDGLGDTIRVSLTEDPEFEIPVAQKLAQ------------- 300
Query: 376 PFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLA 435
F+EK+ + ++ + DY R + L+++ +++ L+
Sbjct: 301 KFQEKNEYKLNYSSKIN----------FDYFNHNKRITNSLLNIGGSN---TSIVFSDLS 347
Query: 436 AK-LVVGMPFKDLATVDSILLRELPSVDDHDARLAL--KRLVDI----SMGVITPLSEQL 488
K +V F S L + ++ D A L + +D ++ ++
Sbjct: 348 KKNKIVSTNFFGFGYSYSEPLDKW-NIFDQAADLVYLGDQTIDFEIPGTLRIVQNYEAWK 406
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
T A L LQE + K PEG +L D+DA + +LP
Sbjct: 407 THKRSDAYPLCTLQEYT----KNKPEGVVF--------------LLVDLDAETAVSELPS 448
Query: 549 NE-------DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ K + Q R+ L+E N PVI + + + A ++ G
Sbjct: 449 EQIIYVAETKKHQKTQVIRKFQYELAELNNRVPVILKLNYELEELEMLQLY-ASSDAGIH 507
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
+DG DG+ + AP D L SF +LQ R R +KTEY+SCPSCGRTLFDLQE + +
Sbjct: 508 FIDGFSDGIWITAPRPLVD-LNSLSFGILQATRTRISKTEYISCPSCGRTLFDLQETTGK 566
Query: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQAT 721
IRE+TSHL G+ I IMGCIVNGPGEMADAD+GYVG PGKI+LY KTVVK+ ++ E+A
Sbjct: 567 IRERTSHLKGLKIGIMGCIVNGPGEMADADYGYVGTGPGKINLYKEKTVVKKNVSEEEAV 626
Query: 722 DALIQLIKDHGRWAEP 737
DALIQLI+D+G W EP
Sbjct: 627 DALIQLIRDNGDWIEP 642
>gi|338209922|ref|YP_004653969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Runella
slithyformis DSM 19594]
gi|336303735|gb|AEI46837.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Runella
slithyformis DSM 19594]
Length = 667
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 300/677 (44%), Positives = 402/677 (59%), Gaps = 39/677 (5%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + +RRKT TV +G++ +GSE+PIRVQ+MTT DT + G++E+V+R+ + G + V
Sbjct: 19 YSRSLTEYLRRKTITVKIGDIPLGSEYPIRVQSMTTVDTMNTEGSIEQVIRMVESGCEYV 78
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + Y++PL+ADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 79 RITAPSVKEAQNLENIRKGLRARGYSVPLIADIHFTPNAAELAARIVEKVRINPGNYADK 138
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YT+DEYQ+EL+ I E F PL++ CK+YG A+RIGTNHGSLSDRIMS YGDSP
Sbjct: 139 K-RFELIDYTEDEYQRELERIREKFIPLLKICKEYGTAMRIGTNHGSLSDRIMSRYGDSP 197
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + ++++ + SMK+SNP+VMV+AYRLLV + G YPLHLGVT
Sbjct: 198 LGMVESALEFLRICEEFNYYDVVLSMKSSNPLVMVEAYRLLVNRLDAEGLKPYPLHLGVT 257
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E L N AE +
Sbjct: 258 EAGEGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAAALINRYTHRAERTTPI 317
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
P E H F + RR + + G V + D S + + L++ Y +
Sbjct: 318 RPLEASPIHPFQYSRRKTKEVLNFGGGNVPR---VIADFSNIEVTRYEDLRSVGHFYLPV 374
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
K D+ VD + PS + LK +VD V L E+ H
Sbjct: 375 PDK----WKMNDIG-VDYLYTGARPS--SFMLPMGLKEIVDYE--VWKTLRER-----EH 420
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIG 554
+ L L E K ++ + +E L D A ++L D
Sbjct: 421 SFPLFTLAEFEAAEEK--SHALNFIIIDAATQITKEQ--LADTPAVLVLQT-----DNAH 471
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-- 612
+ A RR L ++ PV+ + + D+L + A T+ G LLVDGLGDGL+L
Sbjct: 472 AMPALRRCMIDLIAQGIDCPVVIRRTYSTE-NTDELSLFAATDCGGLLVDGLGDGLMLSA 530
Query: 613 --EAPGQDFDFLRDTS------FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
+A G + L+ + F +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR+
Sbjct: 531 HHDAEGTYAERLKHAAQQNSIGFGILQAARTRMSKTEYISCPSCGRTLFDLQETTALIRK 590
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
+T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY G+ VVK+ + A D L
Sbjct: 591 RTDHLKGVKIGIMGCIVNGPGEMADADYGYVGIGKDKIALYRGQQVVKKSVVANNAVDEL 650
Query: 725 IQLIKDHGRWAEPPAEE 741
I LIK+ G+W EP A E
Sbjct: 651 INLIKEDGKWFEPEAIE 667
>gi|70947368|ref|XP_743307.1| GcpE protein [Plasmodium chabaudi chabaudi]
gi|56522740|emb|CAH81161.1| GcpE protein, putative [Plasmodium chabaudi chabaudi]
Length = 813
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 298/763 (39%), Positives = 449/763 (58%), Gaps = 65/763 (8%)
Query: 34 FRKFKSGRRRFTVIRNSSNSSSD-----IAELQPASEGSPLLVPRQKYCESIHKTVRRKT 88
F K GRR+ + NS +S + I +++ + L+ +KYCE + R T
Sbjct: 57 FGKSLHGRRKKKMNFNSLSSDENGDYENIKQIKTDEDXYNLIKDIKKYCECTKRYKRLPT 116
Query: 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V +GNV IG + I +QTMT+ DT++V V ++ + + GADLVR+TVQG +E +A
Sbjct: 117 HEVQIGNVKIGGNNKIAIQTMTSCDTRNVEECVNQIKKCKELGADLVRLTVQGVQEVEAS 176
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDE 208
+ IK+ L+ +N IPLVADIHF P +AL A+ +DKIRVNPGN+ D R ++ Y DE
Sbjct: 177 YRIKDILLSQNITIPLVADIHFNPKIALMAADVYDKIRVNPGNYVDGRKKWVDKVYEKDE 236
Query: 209 YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARI 268
+++ I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +
Sbjct: 237 FEEGKLFIKEKFVPLIEKCKRLNRAMRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDL 296
Query: 269 CRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKS 326
C + +F N ++SMKASN VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS
Sbjct: 297 CIENNFFNVVYSMKASNAYVMIQSYRLLVAKQYEKGNDLMFPIHLGVTEAGFGDNGRIKS 356
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGMRAAEL-QQGVAPFEEKHR-- 382
+GIG+LL DG+GDTIR+SLTE P +E++PC++L NL R QQ + ++ +
Sbjct: 357 YLGIGSLLYDGIGDTIRISLTEDPWEELNPCKKLIGNLKKRIFYTDQQDSSYLADQTKEN 416
Query: 383 ----------------HYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA 426
H F+ R +++ V + VLH + ++ V++ +L+
Sbjct: 417 NNTITNRNNRYTTLDFHNFNETFRDFNNIVKR--NVVKKKNVLHEECTIGNVVTVKELED 474
Query: 427 PELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT--- 482
++K L +L K A T D +++ + ++ + A+ +++L++ S+ +
Sbjct: 475 SLQIFKDLNLELDKNGNLKKGAKTTDIVIINDFENLTNV-AKKTVEKLMEASLHALVDYG 533
Query: 483 PLSEQLTKPL----PHAMVLVNLQELSTGAYKLLPEGTR----------LVVSLRGDESY 528
P S +L K L P+ ++ L+ LL + + + L G E
Sbjct: 534 PKSVELIKNLKVNEPNNQNILYYSTLA-DMLDLLEKNNKDGIEQNNVKGYAIVLNGKEDI 592
Query: 529 EELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
+ +E +KD++ + L +++ V RRL E L N++ P IH+ + ++ D
Sbjct: 593 KVIEKIKDLNPQPLFFILK-SDNIYEHVLVTRRLNEILHTLNIDIPYIHYANIDSNVY-D 650
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLE-------APGQDFDFLRD-------TSFNLLQGCR 634
D+++ + VG L+D +GDGL++ A + D ++ + N+LQ R
Sbjct: 651 DILVNSTVYVGTCLIDLMGDGLIINVTDNNVIAKKEQNDQIKTRVALNSFLTLNILQDTR 710
Query: 635 MRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGY 694
+R KT+Y+SCPSCGRTLF++QE + +I + T HL GV IA+MGCIVNG GEMADA FGY
Sbjct: 711 IRLFKTDYISCPSCGRTLFNIQETTKKIMKLTGHLKGVKIAVMGCIVNGIGEMADAHFGY 770
Query: 695 VGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
VG AP KIDLY GK +V R I E+A D LI+LIK H +W +P
Sbjct: 771 VGSAPKKIDLYYGKELVHRNIPEEEACDRLIELIKKHNKWEDP 813
>gi|149278639|ref|ZP_01884775.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
sp. BAL39]
gi|149230634|gb|EDM36017.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
sp. BAL39]
Length = 618
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/665 (44%), Positives = 396/665 (59%), Gaps = 73/665 (10%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MTT DT + TVE+ +R+ + G + VRIT +EAD IK L
Sbjct: 1 MGGLNPIRIQSMTTTDTMNTIATVEQTIRMVESGCEYVRITAPSMKEADNLANIKKELRY 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
+ YN+PLVADIHF P+ A A +K+RVNPGN+AD++ +FE +EYT YQ EL+ I
Sbjct: 61 RGYNVPLVADIHFTPNAAEAAARIVEKVRVNPGNYADKK-KFENIEYTQSAYQAELERIY 119
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+PRGMVESA EF R+C L+++N
Sbjct: 120 KKFTPLVNICKEYGTAMRIGTNHGSLSDRIMSHYGDTPRGMVESAMEFIRMCEDLNYYNL 179
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ SMKASN VMVQAYRLLV M G +YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DG
Sbjct: 180 VISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDG 239
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQG----VAPFEEKHRHYFDFQRRSG 392
LGDTIRVSLTE PE E R +A RA ++ Q + +E F + RR+
Sbjct: 240 LGDTIRVSLTEDPEFEAPVARAMAQRYEARAMQMDQQPAREILNIQELPYTPFAYNRRT- 298
Query: 393 QLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLA--TV 450
+P+Q G H V++ VS + LK P L ++ + G+ ++
Sbjct: 299 TVPVQHIGG--------HHHPVVMIDVSKENLKDPFFL-NAVGYQYSAGLDKYNMTDQAC 349
Query: 451 DSILLRE-LPS---------VDDHDARLALKR------LVDIS--MGVITPLSEQLTKPL 492
D + L + LPS V ++D L LK L+ S GV EQL
Sbjct: 350 DLVYLGDALPSFSFPGNLKQVYNYDTWLGLKDKNNCHPLLSFSEYQGVALK-DEQLN--- 405
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
+V +N +E S + +L G ++++ L E++
Sbjct: 406 ---LVQLNAEEASGLDFSVL--GEKVILVLTTSEAH------------------------ 436
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
+ A R LF L L PVI +P+ ++ DDL++ A T++GALL DG+GDG+ +
Sbjct: 437 --GMAAQRALFVELMRQELQIPVIIKRAYPS-VNADDLMLYAATDLGALLTDGMGDGVWI 493
Query: 613 EAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG 671
A + TSF +LQ R R +KTEY+SCPSCGRTLFDLQE + IR +T HL G
Sbjct: 494 TADETVGLGLVNSTSFGILQATRTRISKTEYISCPSCGRTLFDLQETTQLIRSRTDHLKG 553
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
+ I IMGCIVNGPGEMADAD+GYVG P KI LY GK VVK+ + +A D LI LIK+
Sbjct: 554 IKIGIMGCIVNGPGEMADADYGYVGTGPDKITLYRGKEVVKKNVNSARALDDLISLIKED 613
Query: 732 GRWAE 736
G W +
Sbjct: 614 GNWVD 618
>gi|313674150|ref|YP_004052146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marivirga
tractuosa DSM 4126]
gi|312940848|gb|ADR20038.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marivirga
tractuosa DSM 4126]
Length = 651
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 293/671 (43%), Positives = 410/671 (61%), Gaps = 38/671 (5%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC S+ RRKT V VG+V IG ++PI +Q+MTT DT D G++E+ +R+ D G
Sbjct: 9 QQYCNSLVAYKRRKTIPVKVGDVTIGGDNPIVLQSMTTVDTMDTEGSIEQSIRMIDAGCQ 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK L ++ YN PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 69 LVRITAPSIKEAENLRAIKEGLKKRGYNSPLVADIHFTPNAAELAAKIVEKVRVNPGNYA 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD+ YQ EL I++ F PLV+ CK++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 129 DKK-KFENIEYTDESYQAELDRIKKRFKPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC +++F++ + SMK+SNP VMVQAYRLLV ++ G YPLHLG
Sbjct: 188 TPFGMVESALEFIRICEEMEFYDIVVSMKSSNPQVMVQAYRLLVQKLDEEGLKPYPLHLG 247
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGE EDGR+KS++GIGTLL+DGLGDTIRVSLTE PE+EI + LA+ E
Sbjct: 248 VTEAGEAEDGRIKSSVGIGTLLEDGLGDTIRVSLTEEPEEEIPVAKVLADR-YNEREDHD 306
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
+ + + +++++R + G+EV V+ SL Q P +
Sbjct: 307 EIPLIDNCLFNPYEYEKRDSRQVANIGGQEVPI---------VMADFSLKQNITPASFF- 356
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI----SMGVITPLSEQL 488
G+ + +D + + D + VD ++G++ L
Sbjct: 357 --------GVGYNYSVPLDKWSISDFAC----DYIFTNDKAVDFEIPGTLGIVHSHKTWL 404
Query: 489 -TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
K +N ++ G ++ P+ + ++ D S E + LK+ D T +L
Sbjct: 405 DEKHKERRFPFINPKDYLKGV-EVHPK-LNFIYAILSDLSEELIVKLKN-DPTAVLLIDT 461
Query: 548 FNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
+N + RRLF L + + + PV+ + + + + L + + T++G LL+DG G
Sbjct: 462 YNTHGMAE---QRRLFMELMQKSCDVPVVIGRAYQD-LSLEKLQLYSATDMGGLLIDGFG 517
Query: 608 DGLLLEAPGQDFD-FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
DG+ + A D + +T+FN+LQ R R +KTEY+SCPSCGRTLFDLQE +A IR +T
Sbjct: 518 DGVFIAAENCGGDKAINETAFNILQASRTRISKTEYISCPSCGRTLFDLQETTAMIRNRT 577
Query: 667 SHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
+HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY G+ V+KRG+ E+A D LI
Sbjct: 578 NHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGQEVMKRGVPSERAVDELID 637
Query: 727 LIKDHGRWAEP 737
+I+ G+W EP
Sbjct: 638 IIRQDGKWLEP 648
>gi|124802547|ref|XP_001347505.1| GcpE protein [Plasmodium falciparum 3D7]
gi|13094969|gb|AAK12103.1|AF323928_1 GcpE [Plasmodium falciparum]
gi|23495086|gb|AAN35418.1|AE014832_40 GcpE protein [Plasmodium falciparum 3D7]
Length = 824
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 289/764 (37%), Positives = 444/764 (58%), Gaps = 86/764 (11%)
Query: 44 FTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHP 103
++++ NSS + E ++ +KYCE K R TR V++GNV IG +
Sbjct: 77 YSLLNEEGNSSKKEYKNLKDEEKYNIIQNIKKYCECTKKYKRLPTREVVIGNVKIGGNNK 136
Query: 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP 163
I +QTM + DT++V V ++ + D GAD+VR+TVQG +EA A + IK L+ +N NIP
Sbjct: 137 IAIQTMASCDTRNVEECVYQIRKCKDLGADIVRLTVQGVQEAQASYHIKEKLLSENVNIP 196
Query: 164 LVADIHFAPSVALRVAECFDKIRVNPGNFAD-RRAQFEQLEYTDDEYQKELQHIEEVFSP 222
LVADIHF P +AL A+ F+KIRVNPGN+ D R+ +++ T +E+ + I+E F P
Sbjct: 197 LVADIHFNPKIALMAADVFEKIRVNPGNYVDGRKKWIDKVYKTKEEFDEGKLFIKEKFVP 256
Query: 223 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK 282
L+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F+N +FSMK
Sbjct: 257 LIEKCKRLNRAIRIGTNHGSLSSRVLSYYGDTPLGMVESAFEFSDLCIENNFYNLVFSMK 316
Query: 283 ASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
ASN VM+Q+YRLLV++ Y +P+HLGVTEAG G++GR+KS +GIG+LL DG+GDTI
Sbjct: 317 ASNAYVMIQSYRLLVSKQYERNMMFPIHLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTI 376
Query: 343 RVSLTEPPEKEIDPCRRLA-NLGMRA---------AELQ------QGVAPFEEKHRHYFD 386
R+SLTE P +E+ PC++L NL R EL+ + + FEE +R++ +
Sbjct: 377 RISLTEDPWEELTPCKKLVENLKKRIFYNENFKEDNELKNNEMDTKNLLNFEENYRNFNN 436
Query: 387 FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKD 446
++R+ ++K VLH + ++ V++ +L+ ++K L ++ K
Sbjct: 437 IKKRN----VEKNN------NVLHEECTIGNVVTIKELEDSLQIFKDLNLEVDSNGNLKK 486
Query: 447 LA-TVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS----EQLTKPLPHA------ 495
A T D +++ + ++ + + + +L+ + + ++ E + K P+
Sbjct: 487 GAKTTDMVIINDFHNITNLGKK-TVDKLMQVGINIVVQYEPHNIEFIEKMEPNNDNNNNN 545
Query: 496 -----MVLVNLQELSTGAYKLL----PEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
+ V+++ + + K + +G L+ L G E + ++ +K+++ + +
Sbjct: 546 NNNNILFYVDIKNIMNSSEKNIKLSNSKGYGLI--LNGKEDIQTIKKIKELNRRPLF--I 601
Query: 547 PFNEDKI-GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
D I V RR+ E L N+N P IH++ N + DD+++ + G+ L+D
Sbjct: 602 LLKSDNIYEHVLITRRINELLQSLNINIPYIHYVDI-NSNNYDDILVNSTLYAGSCLMDL 660
Query: 606 LGDGLLLEAP-----------------------GQDFDFLRDTS---------FNLLQGC 633
+GDGL++ G + D R S N+LQ
Sbjct: 661 MGDGLIVNVTNDVLTNKKKIETKYDEKEEVEEEGNNKDIHRLLSRVALNSFLTLNILQDT 720
Query: 634 RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG 693
R+R KT+Y++CPSCGRTLF++QE + +I + T HL GV IA+MGCIVNG GEMADA FG
Sbjct: 721 RIRLFKTDYIACPSCGRTLFNIQETTKKIMKLTGHLKGVKIAVMGCIVNGIGEMADAHFG 780
Query: 694 YVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
YVG AP KIDLY GK +V+R I E+A D LI+LIK H +W +P
Sbjct: 781 YVGSAPKKIDLYYGKELVERNIPEEEACDKLIELIKKHNKWKDP 824
>gi|255533339|ref|YP_003093711.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
heparinus DSM 2366]
gi|255346323|gb|ACU05649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
heparinus DSM 2366]
Length = 644
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 304/673 (45%), Positives = 400/673 (59%), Gaps = 60/673 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V +G+V +G +PIR+Q+MTT DT D GTVE+ +R+ + G + VRIT +E
Sbjct: 9 RFLTREVAIGDVPMGGLNPIRIQSMTTTDTMDTIGTVEQTIRMVNSGCEYVRITAPSMKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK L + YN+PLVADIHF P+ A A +K+RVNPGN+AD++ +FE +EY
Sbjct: 69 AENLANIKKELRLRGYNVPLVADIHFTPNAAEAAARIVEKVRVNPGNYADKK-RFENIEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T YQ EL I + F+PLV+ CK+YG A+RIGTNHGSLSDRIMS+YGD+PRGMVESA E
Sbjct: 128 THQAYQAELDRIYKKFTPLVKICKEYGTAMRIGTNHGSLSDRIMSHYGDTPRGMVESAME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C L+++N + SMKASN VMVQAYRLLV M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FIRMCEDLNYYNLVISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL+DGLGDTIRVSLTE PE E + LA + A G F E
Sbjct: 248 KSAVGIGTLLEDGLGDTIRVSLTEDPEFEAPVAKALAMRYEKRALDLYGKMLFSETKTIV 307
Query: 385 --------FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
F++QRR +P+Q G H +V++ VS + LK P L ++
Sbjct: 308 PGQLPYSPFEYQRRV-TVPVQHIGG--------HFHPAVMLDVSHENLKDPYFL-AAVGY 357
Query: 437 KLVVGMPFKDLA--TVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
+ G+ ++A D + L +LPS LK++ + S
Sbjct: 358 QYSAGLDKYNMADQACDIVYLGDQLPSFSFPG---NLKQVYNYS---------------- 398
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
++L++ + LL L V L E+L ++K + DL +DK+
Sbjct: 399 ---TWLSLKD-KNNCHPLLSYDEYLSVELHD----EQLNLVKITAENALQTDLSALKDKV 450
Query: 554 ---------GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
V A R F L E L PVI + ++ DDL++ A T++GALL D
Sbjct: 451 VLVLETSSLNGVAAQRAFFNALIEKGLQIPVIIKRSY-TAVNTDDLMLYAATDMGALLTD 509
Query: 605 GLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 663
G+GDG+ ++A + TSF +LQ R R +KTEY+SCPSCGRTLFDLQE + IR
Sbjct: 510 GMGDGVWIDADALLGLSLINATSFGILQATRTRISKTEYISCPSCGRTLFDLQETTQLIR 569
Query: 664 EKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDA 723
+T HL G+ I IMGCIVNGPGEMADAD+GYVG P KI LY GK VVK+ + +A D
Sbjct: 570 SRTDHLKGIKIGIMGCIVNGPGEMADADYGYVGTGPDKITLYRGKEVVKKNVNAARALDD 629
Query: 724 LIQLIKDHGRWAE 736
LI LIK+ G W +
Sbjct: 630 LIDLIKEDGNWVQ 642
>gi|410027746|ref|ZP_11277582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinilabilia
sp. AK2]
Length = 659
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/685 (43%), Positives = 411/685 (60%), Gaps = 50/685 (7%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + +YC S+ RRKT V VG+V IG ++PI VQ+MTT DT D G+VE+ +R+ D
Sbjct: 6 LLDKIRYCNSLTSYSRRKTIPVKVGDVIIGGDNPIVVQSMTTVDTMDTQGSVEQCIRMID 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ IK L ++ YN PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 AGCQLIRITAPSIKEAENLRNIKEGLKKRGYNTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELYRIRERFLPLVKICKEHGTAIRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +F++ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFYDVVISMKSSNTQVMVQAYRLLVHKLEEGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAA 368
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALVD----RY 300
Query: 369 ELQQGVAPFEEKHRHY----FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
+ + AP + + HY F++ +R D V + G+ + V D
Sbjct: 301 DKRSNHAPIVDIN-HYPISPFEYNKR-------------DTLEVFNFGGTNVPRVIADIS 346
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
P++ K + +P D ++ + S + + + +I + +
Sbjct: 347 AIPQVSEKEMKQVGHFYLPELDKWKMNDQGADYVFSGSNPIPFMLPNGMKEIQLYPVWFT 406
Query: 485 SEQLTKPLPHAMV--LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMI 542
+E P + + ++L G L+ E ++ +L E +++ ++ D
Sbjct: 407 AEDQVNKFPAFQLEEFIAAEKLHYGLNFLMLEDYQIAKALPVLEGRKDVVVILQSDN--- 463
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LH++P A RR F L EN+ PV+ + +P +D ++ A T+VG LL
Sbjct: 464 LHNMP----------ALRRAFFELLENHNQLPVVVKVNYPKQ-PQDQTMLYAATDVGGLL 512
Query: 603 VDGLGDGLLL-------EAPGQDFDFLR---DTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+DGLG+G++L A G+ D ++ SF +LQ R R +KTEY+SCPSCGRTL
Sbjct: 513 IDGLGEGIMLGLDAYHETARGEVLDQIKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTL 572
Query: 653 FDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
FDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY GK VVK
Sbjct: 573 FDLQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVVK 632
Query: 713 RGIAMEQATDALIQLIKDHGRWAEP 737
R + E+A D LI++I+ G W EP
Sbjct: 633 RSVPSEKAVDELIEIIRKDGMWIEP 657
>gi|284036285|ref|YP_003386215.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Spirosoma
linguale DSM 74]
gi|283815578|gb|ADB37416.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Spirosoma
linguale DSM 74]
Length = 678
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 301/687 (43%), Positives = 405/687 (58%), Gaps = 44/687 (6%)
Query: 66 GSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVM 125
GSP+L Y S+ + VRRKT TV +G+V +GS++PIRVQ+MTT DT D G+VE+ +
Sbjct: 21 GSPVL-----YTPSLTQYVRRKTSTVTIGDVPMGSDYPIRVQSMTTVDTMDTKGSVEQTI 75
Query: 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKI 185
R+ + G + VRIT +EA I+ L + Y PLVADIHF P+ A A +K+
Sbjct: 76 RMIEAGCEYVRITAPSVKEAQNLENIRKELRARGYTTPLVADIHFTPNAAELAARIVEKV 135
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPGN+ADR+ +FE ++YTD Y EL+ I + F PLV CK+YG A+RIGTNHGSLSD
Sbjct: 136 RINPGNYADRK-RFEFIDYTDAAYAAELERIRDKFLPLVRICKEYGTAMRIGTNHGSLSD 194
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
RI+S YGD+P GMVESA EF RIC +++N SMK+SNP VMVQAYRLLV + G
Sbjct: 195 RILSRYGDTPVGMVESALEFLRICEAENYYNITLSMKSSNPQVMVQAYRLLVQRLDEEGL 254
Query: 306 D-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
YPLHLGVTEAGE EDGR+KSA+GIGTLL+DG+GDT+RVSLTE PE+E + L +
Sbjct: 255 KPYPLHLGVTEAGEAEDGRIKSALGIGTLLEDGIGDTVRVSLTEEPEREAPVAKALIDRY 314
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
A Q + + F + RR + E V + G + V D
Sbjct: 315 TNRAATSQPIPAITTYPINPFQYSRR-----LTHE--------VANIGGQNVPRVIADYS 361
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARL----ALKRLVDISMGV 480
+ P +K+L +P D ++ L + + A+ LK ++D +
Sbjct: 362 RVPVTEHKNLHPIGHFYLPEPDKWRMND-LGADYIYTGSYPAQFMLPNGLKEILDYT--- 417
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYK--LLPEGTRLVVSLRGDESYEELEILKDID 538
+ T P +L ++ L+ A + L P + VSL S +EL D
Sbjct: 418 VWQTGTDQTNVFP---LLTTVEYLAARAAQSELHPRLNFVRVSLPA--SSDELFTTLKAD 472
Query: 539 ATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNV 598
T++L + D + RRL L + PVI + +P + +++ + A T+V
Sbjct: 473 TTVVLL---ISTDNAHAMPELRRLVVELINRGITAPVIINRGYP-AVSEEEVPLYASTDV 528
Query: 599 GALLVDGLGDGLLLEAP-----GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
G LL+DGLGDG++L AP D L + SF +LQ R R TKTEY+SCPSCGRTLF
Sbjct: 529 GGLLIDGLGDGIMLSAPQANPSDADLKRLNNLSFGILQAARTRITKTEYISCPSCGRTLF 588
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
DLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY G+ V+K+
Sbjct: 589 DLQETTALIRQRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGIGRDKIALYRGQQVIKK 648
Query: 714 GIAMEQATDALIQLIKDHGRWAEPPAE 740
+ ++A D LI+LI++ RW EP E
Sbjct: 649 SVPADRAVDELIELIREDNRWLEPTFE 675
>gi|395218576|ref|ZP_10402218.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pontibacter
sp. BAB1700]
gi|394454267|gb|EJF08957.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pontibacter
sp. BAB1700]
Length = 657
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 302/674 (44%), Positives = 405/674 (60%), Gaps = 38/674 (5%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + RR+T V +G+V +G+ HPIRVQ+MTT DT D G+VE+ +R+ + G + +
Sbjct: 5 YCPSLTEYKRRETIEVHIGDVPMGAHHPIRVQSMTTVDTMDTLGSVEQCIRMIEAGCEYI 64
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK+ L ++ YN PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 65 RITAPSIKEAENLRNIKDELRRRGYNTPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 124
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE +EY D+ YQ EL I + F PLV CK++G A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 125 K-KFEVIEYNDETYQAELDRIRDRFVPLVRICKEHGTAMRIGTNHGSLSDRILSRYGDTP 183
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC ++N + SMKASN VMVQAYRLLV ++ G YPLHLGVT
Sbjct: 184 LGMVESALEFLRICEDEQYYNIVISMKASNTQVMVQAYRLLVQKLEEEGLKPYPLHLGVT 243
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + AE Q +
Sbjct: 244 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEAEAPVAKALIDRYTHRAEKAQPI 303
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
P F + RR + ++ G + R V D S L + LK+ LY L
Sbjct: 304 KPLCNIPIDPFQYHRRE-TVEVENVGGQNVPRVVA--DLSRLREIQYADLKSVGHLYSML 360
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
K DL D I DH L + +I + QL + H
Sbjct: 361 LDKF----NMNDLGA-DYIY------TGDHPINFMLPNGLK---EIINYVPWQLAEEQEH 406
Query: 495 AMVLVNLQE-LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
L+ +Q+ L G ++ P+ V + + + E L+ LK D+T++L NE +
Sbjct: 407 RHPLLTVQQYLEAG--QMHPK-LNFVEATISELTTELLDRLK-TDSTVVLMLHTTNEHAM 462
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
+ R+ F L N +N P I + + D + + A T+VG LL+DGLGDG++L
Sbjct: 463 PEL---RKCFFRLMNNGINTPAIVRRSY-GELTPDQVQLYASTDVGGLLIDGLGDGIMLG 518
Query: 614 A---PGQD-------FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 663
P Q+ + L + SF +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR
Sbjct: 519 TELLPEQEKVELLQTIEKLNNLSFGILQAARTRMSKTEYISCPSCGRTLFDLQETTAMIR 578
Query: 664 EKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDA 723
++T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY G+TVVK+ + ++A D
Sbjct: 579 KRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGVGKDKIALYRGQTVVKKSVPADRAVDE 638
Query: 724 LIQLIKDHGRWAEP 737
LI+LI++ +W EP
Sbjct: 639 LIELIREDEKWIEP 652
>gi|124008572|ref|ZP_01693264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microscilla
marina ATCC 23134]
gi|123985946|gb|EAY25803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microscilla
marina ATCC 23134]
Length = 664
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 301/684 (44%), Positives = 409/684 (59%), Gaps = 47/684 (6%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
R+ Y +S+ + RR++ V +GNV +G + PIRVQ+MTT DT D G++ + +R+ D G
Sbjct: 11 RKLYTQSLTEFKRRQSIEVNIGNVPLGGKQPIRVQSMTTVDTMDTEGSIAQAIRMIDAGC 70
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
+ VRIT +EA IK L K Y PLVADIHF P+ A A +K+RVNPGN+
Sbjct: 71 EYVRITAPSIKEAQNLQNIKEGLRAKGYQTPLVADIHFTPNAAELAAGIVEKVRVNPGNY 130
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
AD++ +FE +EYTD++YQ+ELQ I E F PLV+ CK A+RIGTNHGSLSDRIMS YG
Sbjct: 131 ADKK-KFEIIEYTDEQYQEELQRIRERFEPLVKLCKANKTAMRIGTNHGSLSDRIMSRYG 189
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHL 311
D+P GMVESA EF RIC L +++ + SMKASNP VMVQAYRLLV ++ G YPLHL
Sbjct: 190 DTPLGMVESALEFLRICEDLAYYDIVISMKASNPQVMVQAYRLLVQKLDEEGLKPYPLHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ 371
GVTEAGEGEDGR+KSA+GIG LL+DGLGDT+RVSLTE PE E+ ++L + + A
Sbjct: 250 GVTEAGEGEDGRIKSAMGIGALLEDGLGDTVRVSLTEEPEAEMPVGKKLVDRYLDRAN-H 308
Query: 372 QGVAPFEEKHRHY----FDFQRRSGQLPIQKEGEEVDYRGV--LHRDGSVLMSVSLDQLK 425
+ PF+ ++ + +Q+R+ KE + V + D S + + +D LK
Sbjct: 309 SSITPFDWQNASIEYSPYAYQKRT-----TKEVSNFGHDNVPRVIADYSTVNHLQVDDLK 363
Query: 426 APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS 485
+ VG + L +D + +L + + + + ++ + VI S
Sbjct: 364 S-------------VGHYY--LPELDKWGMNDLGADYIYLGKQLIPFMMPNGLKVIQDYS 408
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD 545
K + + + E T A L + R + D S + ++ +K+ D ++
Sbjct: 409 -TWQKEKEQSYPALTIDEYMTAAD--LGDTLRFLYVQWSDFSEDLIKSIKN-DHHLV--- 461
Query: 546 LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV-IGAGTNVGALLVD 604
L + D + RR+F L E L PV+ + +LV + A T+VG LL+D
Sbjct: 462 LILSTDNSHAMAELRRVFFELMEQGLELPVVVKRDYAK--ENIELVQLYASTDVGGLLID 519
Query: 605 GLGDGLLL--------EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
G GDG++L E + + L + SF +LQ R R TKTEY+SCPSCGRTLFDLQ
Sbjct: 520 GWGDGIMLSNGQPENKEELLEQINQLNNLSFGILQAARTRMTKTEYISCPSCGRTLFDLQ 579
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
E +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY KTVVKRG+
Sbjct: 580 ETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYRSKTVVKRGVP 639
Query: 717 MEQATDALIQLIKDHGRWAEPPAE 740
E A D LI+LI++ GRW E +E
Sbjct: 640 SEHAVDELIELIREDGRWLERTSE 663
>gi|375149875|ref|YP_005012316.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niastella
koreensis GR20-10]
gi|361063921|gb|AEW02913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niastella
koreensis GR20-10]
Length = 665
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 308/690 (44%), Positives = 408/690 (59%), Gaps = 50/690 (7%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q YC+S+ + R TR V +G++ +G+ +PIRVQTMTT DT D TVE+ +R + GA+
Sbjct: 2 QLYCDSLTEYKRLATREVRIGDLLLGNFNPIRVQTMTTTDTMDTIATVEQSIRCIEAGAE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRIT K+EA+ IKN L ++ Y PL+ADIHF P+ A A +K+RVNPGN+
Sbjct: 62 MVRITAPSKKEAENLLNIKNELHKRGYKTPLIADIHFTPNAAEIAARIIEKVRVNPGNYV 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FEQ++YTD EY +E+ I E F+PLV+ CK+YG A+RIGTNHGSLSDRIMS YGD
Sbjct: 122 DKK-KFEQIDYTDAEYAEEIDRIRERFTPLVKICKEYGTAMRIGTNHGSLSDRIMSRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVESA EF RI R +HN + SMKASNP VMVQAYRLLV M G YPLHLG
Sbjct: 181 TPMGMVESAMEFLRIARNESYHNIILSMKASNPQVMVQAYRLLVNVMMDEFGEAYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR----RLANLGMRAA 368
VTEAG+GEDGR+KSAIGIGTLL+DGLGDTIRVSLTE PE EI CR R N +
Sbjct: 241 VTEAGDGEDGRIKSAIGIGTLLEDGLGDTIRVSLTEDPEFEIPVCRDLVNRYTNRQLVTG 300
Query: 369 ELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPE 428
Q G+ + F++ RRS G+ V V+ D S+ + L+A
Sbjct: 301 NKQTGIPAITKVPYSPFEYTRRSTDTVSNIGGKHVP---VVVADFMKAASIRHEDLQAIG 357
Query: 429 LLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL 488
Y + K ++ D ++LP D LK + D + + P E+
Sbjct: 358 YTYNTETDKFIIADAAADYLYTG----KKLP---DFALPGTLKVICDHATWLNAPDKEKY 410
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI--DATMILHDL 546
PL + + + S G V++ +++ + E+L+ I D T++L
Sbjct: 411 -YPLFQSTEYLKSTDHS---------GKLNFVAVDVNQTNCQ-ELLQKIRKDYTVVLCLY 459
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
N + V RR L + P+I ++ N D+ +I T+ GALL+DG+
Sbjct: 460 SSNAHTMPSV---RRYIIELMNQGITCPIILSVE-SNDTTIDEQLIHFSTDSGALLLDGM 515
Query: 607 GDGLLL----------EAPGQDF-------DFLRDTSFNLLQGCRMRNTKTEYVSCPSCG 649
GDG+ L + G+ + F+ +TSF++LQ R R +KTEY+SCPSCG
Sbjct: 516 GDGIWLMNEPEKIRNQKVSGRTYLETKSNHQFINNTSFSILQATRTRISKTEYISCPSCG 575
Query: 650 RTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
RTLFDLQE +A+IR T HL GV IAIMGCIVNGPGEMADADFGYVG GKI LY GK
Sbjct: 576 RTLFDLQETTAKIRSVTHHLKGVKIAIMGCIVNGPGEMADADFGYVGSGVGKITLYKGKE 635
Query: 710 VVKRGIAMEQATDALIQLIKDHGRWAEPPA 739
+VKR + A + LI L+K++ W E A
Sbjct: 636 IVKRNVDSAIAVEELINLLKENNAWVEKTA 665
>gi|409100369|ref|ZP_11220393.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pedobacter
agri PB92]
Length = 660
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 301/675 (44%), Positives = 397/675 (58%), Gaps = 42/675 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+YC S+ + R TR V +G++A+G +PIR+Q+MTT DT D GTVE+ +R+ + G +
Sbjct: 13 EYCNSLTQYSRFLTREVKIGDIALGGHNPIRIQSMTTTDTMDTIGTVEQTIRMVESGCEY 72
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT +EA+ IK L + Y++PL+ADIHF P+ A A +K+RVNPGN+AD
Sbjct: 73 VRITAPSIKEAENLANIKKELRFRGYDVPLIADIHFTPNAAEMAARIVEKVRVNPGNYAD 132
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE LEYT D Y EL+ I + F PL++ CK+YG A+RIGTNHGSLSDRIMS+YGD+
Sbjct: 133 KK-KFENLEYTQDAYTAELERINKKFVPLIKICKEYGTAMRIGTNHGSLSDRIMSHYGDT 191
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EF R+C +++N + SMKASN VMVQAYRLLV M G +YPLHLGVT
Sbjct: 192 PRGMVESAMEFIRMCEAENYYNLVISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVT 251
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE E + LA+ + AE G+
Sbjct: 252 EAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEDPEFEAPVAKALADRYVNRAE---GL 308
Query: 375 APFEEKHRHYFDFQRRSGQLPI-------QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
E + + GQ P ++ E V + G H V++ VS + LK P
Sbjct: 309 KLKVESNTVVCHPELVEGQSPTYNPYQYSRRTTESVQHIGG-HHHPVVMIDVSKENLKDP 367
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
L ++ G+ +LA +L + DH + + T L
Sbjct: 368 YFL-NAIGYNYSAGLDKYNLADQAC----DLAFLGDHLPSFSFPGNLKQVYNYQTWLKLH 422
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
K H L +L E + A K DE +EI + LH L
Sbjct: 423 -DKNNCHP--LFSLDEFNEAAVK--------------DEHLNFVEIDAAHFNHLSLHQL- 464
Query: 548 FNEDKIGRVQAA------RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
N + + A+ R F L E N+ PVI + + ++ D L + A T+ GAL
Sbjct: 465 INVVFVLKTTASHGMAEQRAFFVALQERNIQTPVIIKRTYED-LNADSLQLYASTDFGAL 523
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
DG GDG+ ++A GQ+ + TSF +LQ R R +KTEY+SCPSCGRTLFDLQE +
Sbjct: 524 FTDGFGDGIWIDASGQNLALINSTSFGILQATRTRISKTEYISCPSCGRTLFDLQETTQL 583
Query: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQAT 721
IR +T HL G+ I IMGCIVNGPGEMADAD+GYVG P KI LY G+ VVK+ + A
Sbjct: 584 IRSRTDHLKGLKIGIMGCIVNGPGEMADADYGYVGTGPDKITLYRGQEVVKKNVNTAFAL 643
Query: 722 DALIQLIKDHGRWAE 736
D LI +IK G W E
Sbjct: 644 DELIDIIKGDGNWME 658
>gi|374375169|ref|ZP_09632827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niabella soli
DSM 19437]
gi|373232009|gb|EHP51804.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niabella soli
DSM 19437]
Length = 682
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 314/722 (43%), Positives = 410/722 (56%), Gaps = 99/722 (13%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L + Y S+ R T+ V +G++ +G+ HPIRVQTMTT DT D TVE+ +R +
Sbjct: 6 LCSMELYAASLTSYKRLLTKEVRIGDLLLGNNHPIRVQTMTTTDTMDTLATVEQSIRCIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
GA+LVRIT K+EA+ IKN L ++ YN PLVADIHF P+ A A +K+RVNP
Sbjct: 66 AGAELVRITAPSKKEAENLLNIKNELHKRGYNTPLVADIHFTPNAAEIAARIVEKVRVNP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+ D++ +FEQ+EYTD EY +E+ I E F+PLV+ C++YG A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYVDKK-KFEQIEYTDAEYAEEIDRIRERFTPLVKICREYGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM-YVHGWDYP 308
YGD+P GMVESA EF RI R D+H + SMKASNP VMVQAYRLL+ M G YP
Sbjct: 185 RYGDTPMGMVESAMEFLRIARSEDYHQIILSMKASNPQVMVQAYRLLIKTMDEEFGEIYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR----RLANLG 364
LHLGVTEAG+GEDGR+KSAIGIGTL++DG+GDTIRVSLTE PE EI CR R
Sbjct: 245 LHLGVTEAGDGEDGRIKSAIGIGTLMEDGIGDTIRVSLTEDPELEIPVCRDIVKRYEVNK 304
Query: 365 MRAAELQQGVAPFEEKHRHY---------FDFQRR---------SGQLPIQKEGEEVDYR 406
++ ++ + V+ F ++ F ++RR GQ+P
Sbjct: 305 FKSLKVNREVSDFLSTYQPLNLSTLKYSPFQYKRRISAPVSNIGGGQVP----------- 353
Query: 407 GVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDA 466
V+ + S +V L++ Y + K + A D I L DD
Sbjct: 354 -VVVANFSNRQTVMPQDLESIGYTYDQVTDKWHIAD-----AAADYIYL------DDPAI 401
Query: 467 RLALKRLVDISMGVITPLSEQL-----TKPLPHAMVLVNLQELSTGAYKLLPEGTRLV-- 519
AL ++ +ITP S+ L TK P + AY EG +
Sbjct: 402 GFALPG----TLKIITPHSQWLLVEDKTKCFPF---------YTAEAYT---EGDSHINF 445
Query: 520 VSLR----GDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPV 575
VS+ G+ S L+ L T++ + D +Q+ RR L E N P+
Sbjct: 446 VSVNCTDGGELSDAALDNLVQAKNTVLF----LSSDNKNAMQSVRRFCMLLQEKNCTHPI 501
Query: 576 IHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-------------EAPGQDF--- 619
I N D+ +I T GAL +DG GDG+ L + G+++
Sbjct: 502 ILETN-SNWETADEHLIHLATETGALFLDGFGDGICLGMGQKADAAVSIVNSSGRNYLNN 560
Query: 620 ----DFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
FL +T+F++LQ R R +KTEY+SCPSCGRTLFDLQE + +IR T+HL GV IA
Sbjct: 561 NSVHQFLNNTAFSILQATRTRISKTEYISCPSCGRTLFDLQETTTKIRSVTNHLKGVKIA 620
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFGYVG PGKI LY GK VVKR + + A + LI L+K++ W
Sbjct: 621 IMGCIVNGPGEMADADFGYVGSGPGKITLYKGKEVVKRNVNSDIAVEELINLLKENEAWI 680
Query: 736 EP 737
EP
Sbjct: 681 EP 682
>gi|417765124|ref|ZP_12413090.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|400352724|gb|EJP04903.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bulgarica str. Mallika]
Length = 663
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/683 (41%), Positives = 413/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L ++ DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASKFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY+GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYLGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|417786381|ref|ZP_12434073.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. C10069]
gi|418670491|ref|ZP_13231862.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|421121483|ref|ZP_15581777.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. Brem 329]
gi|409950408|gb|EKO04935.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. C10069]
gi|410345582|gb|EKO96673.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. Brem 329]
gi|410753873|gb|EKR15531.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 663
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/683 (41%), Positives = 412/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY+GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYLGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|397690323|ref|YP_006527577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Melioribacter
roseus P3M]
gi|395811815|gb|AFN74564.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Melioribacter
roseus P3M]
Length = 649
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 296/686 (43%), Positives = 409/686 (59%), Gaps = 69/686 (10%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S + R KTR V +G V +G ++PIRVQ+MTT DT D TVE+ +R+ + G +
Sbjct: 7 KYCLSATRYKRYKTREVNIGGVPLGGDNPIRVQSMTTTDTMDTIATVEQSIRMIEAGCEY 66
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT EA IKN L ++ Y PL+ADIHF P+ A A +K+R+NPGN+ D
Sbjct: 67 VRITAPSINEARNLENIKNELRKRGYKTPLIADIHFTPNAAEVAARIVEKVRINPGNYVD 126
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F+ +EYTD +Y++E++ I E F PL++ CK+YG A+RIGTNHGSLSDRIMS YGD+
Sbjct: 127 KK-KFQTIEYTDKQYEEEIERIRERFVPLLKICKEYGTAIRIGTNHGSLSDRIMSRYGDT 185
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RICR +FH+ + SMKASNP VMVQAYRLLV +M G++YPLHLGVT
Sbjct: 186 PLGMVESALEFVRICRDENFHDIVLSMKASNPQVMVQAYRLLVNKMEEEGYNYPLHLGVT 245
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE----IDPCRRLANLGMRAA-- 368
EAG+GEDGR+KSA+GIG LL+DGLGDTIRVSLTE PE E I R AN G +
Sbjct: 246 EAGDGEDGRIKSAVGIGALLEDGLGDTIRVSLTEEPENEIPVAITLAERYANRGGHESIP 305
Query: 369 ELQQGVA-PFEEKHRHYFDFQRRSGQ-----------LPIQKEGEEVDYRGVLHRDGSVL 416
+++ V PF K R F+ G + + KE +++ G + G+
Sbjct: 306 SIKKVVIDPFNYKRRETFEVSDFGGANVPKVIADFALVDLNKES-QLEPIGYTYDGGTDK 364
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
+ S DQ + + +Y L K+ P +L T L + D+D + ++ +
Sbjct: 365 WNYS-DQ--SADYIY--LGKKI----PAFNLPT-------NLKPILDYDEWIKSEKKTEY 408
Query: 477 --SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEIL 534
G ++ ++K V +++ ++ + +++ R+V L
Sbjct: 409 FPYFGSTKDFAQSISKSFVMNFVEISINDIKNKSLEIIKNDPRIVFVL------------ 456
Query: 535 KDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
T LH + RR+F +L EN++ PV+ + + L + +
Sbjct: 457 ----TTGNLHGM----------AEQRRVFFHLIENDIKNPVVIRRAYSTD-DSEKLTLYS 501
Query: 595 GTNVGALLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
T++GALL+DGLGDG+ + + + + SF +LQ R R +KTEY++CPSCGR
Sbjct: 502 STDLGALLIDGLGDGVWITPAAKSDAGATELINRLSFGILQATRTRISKTEYIACPSCGR 561
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLFDL E++ +IR++T HL GV IAIMGCIVNGPGEMADAD+GYVG PGKI LY GK +
Sbjct: 562 TLFDLVEVTNKIRKRTEHLKGVKIAIMGCIVNGPGEMADADYGYVGSGPGKITLYRGKDI 621
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAE 736
VKR I E A D LI+LIK+ G W E
Sbjct: 622 VKRNIKSEYALDELIELIKEDGNWIE 647
>gi|398339839|ref|ZP_10524542.1| deoxyxylulose biosynthesis protein [Leptospira kirschneri serovar
Bim str. 1051]
gi|421089206|ref|ZP_15550019.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 200802841]
gi|410002103|gb|EKO52627.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 200802841]
Length = 663
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/679 (40%), Positives = 404/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLS----ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y +N FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L+QLIKD+G W++P
Sbjct: 642 IADEKLVQLIKDNGLWSDP 660
>gi|421132246|ref|ZP_15592416.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 2008720114]
gi|410356280|gb|EKP03627.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 2008720114]
Length = 663
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/679 (40%), Positives = 404/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLS----ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y +N FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L+QLIKD+G W++P
Sbjct: 642 IADEKLVQLIKDNGLWSDP 660
>gi|418727892|ref|ZP_13286476.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12758]
gi|421127937|ref|ZP_15588155.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421133578|ref|ZP_15593725.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410022264|gb|EKO89042.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410434404|gb|EKP83542.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410777358|gb|EKR57322.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12758]
Length = 663
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/683 (41%), Positives = 412/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY+GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYLGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|417770949|ref|ZP_12418849.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Pomona]
gi|418681433|ref|ZP_13242662.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|418707092|ref|ZP_13267928.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|400326839|gb|EJO79099.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|409947063|gb|EKN97067.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Pomona]
gi|410763298|gb|EKR34029.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|455669671|gb|EMF34738.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Fox 32256]
Length = 663
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 286/687 (41%), Positives = 412/687 (59%), Gaps = 54/687 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNSNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQL----K 425
+ E R+ F + R S ++ I + E V +L + S ++ +L K
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 426 APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS 485
+P + +S+ VDS L +L + +A AL V I + L+
Sbjct: 362 SPSIEPESI--------------LVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLN 405
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEEL 531
E+L K L++ ++ + +G +++ L+ GD+ + L
Sbjct: 406 EKLQKE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSL 458
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
L D + + + ++ F+ D + R+L LS FP++ H F N ++ +
Sbjct: 459 RGLPDTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEAL 513
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+ +G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGR
Sbjct: 514 YNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGR 573
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +
Sbjct: 574 TLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEI 633
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEP 737
V + + E A + L+QLIKD+G W +P
Sbjct: 634 VLKNVPSEIADEKLVQLIKDNGLWQDP 660
>gi|418685200|ref|ZP_13246378.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410740267|gb|EKQ84987.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
Length = 665
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/679 (40%), Positives = 404/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 6 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 66 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 126 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 184
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 185 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 244
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 245 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 304
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 305 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 355
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 356 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 413
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 414 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 466
Query: 550 EDKIG------RVQAARRLFEYLS----ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y +N FP++ H F N ++ + + +G
Sbjct: 467 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 523
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 524 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQET 583
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 584 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 643
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L+QLIKD+G W++P
Sbjct: 644 IADEKLVQLIKDNGLWSDP 662
>gi|418679230|ref|ZP_13240494.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|400320355|gb|EJO68225.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
Length = 663
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/679 (40%), Positives = 404/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLS----ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y +N FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L+QLIKD+G W++P
Sbjct: 642 IADEKLVQLIKDNGLWSDP 660
>gi|418699313|ref|ZP_13260278.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bataviae str. L1111]
gi|410761683|gb|EKR27856.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bataviae str. L1111]
Length = 663
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 286/683 (41%), Positives = 412/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGFFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY+GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYLGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|24215859|ref|NP_713340.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. 56601]
gi|386074991|ref|YP_005989309.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. IPAV]
gi|417762928|ref|ZP_12410913.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000624]
gi|417776246|ref|ZP_12424088.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000621]
gi|418674219|ref|ZP_13235526.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000623]
gi|418707890|ref|ZP_13268704.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418723547|ref|ZP_13282385.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12621]
gi|421115898|ref|ZP_15576293.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|50401053|sp|Q8F1H5.1|ISPG_LEPIN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|24197059|gb|AAN50358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. 56601]
gi|353458781|gb|AER03326.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. IPAV]
gi|409941306|gb|EKN86938.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000624]
gi|409962916|gb|EKO26646.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12621]
gi|410012540|gb|EKO70636.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|410574016|gb|EKQ37056.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000621]
gi|410578639|gb|EKQ46493.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000623]
gi|410771750|gb|EKR46950.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|455789858|gb|EMF41762.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Lora str. TE 1992]
Length = 663
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 286/683 (41%), Positives = 411/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|418688892|ref|ZP_13250021.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. FPW2026]
gi|400361884|gb|EJP17843.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. FPW2026]
Length = 663
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/699 (41%), Positives = 411/699 (58%), Gaps = 78/699 (11%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNSNSV 302
Query: 375 APFEEKHRHYFDFQR-----------RSGQ---------LPIQKEGEEVDYRGVLHRDG- 413
+ E R+ F + R +G+ LP + ++ L++ G
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 414 -------SVLMSVSL-DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHD 465
S+L+ L DQLK E+ + A + VG+ +++ L +EL S
Sbjct: 362 SLSIEPESILVDSPLPDQLK--EISETATALSIPVGILLSKNVSLNEKLQKELLSF---- 415
Query: 466 ARLALKRLVDISMG--VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR 523
++ + G +++ L E+ L E+ T KL SLR
Sbjct: 416 PKIVFDPFLQFQDGEKMLSFLKERQNAGL--------FSEIHTSGDKL--------DSLR 459
Query: 524 G-DESYEEL---EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
G ++ E+ +L +D+ IL+D R+L LS FP++ H
Sbjct: 460 GLPDTLSEIGIKNVLFSLDSKEILYDY-------------RKLGSILSR--FEFPILLHG 504
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNT 638
F N ++ + + +G LL+DG+GD + + +D + + S++LLQG R+R T
Sbjct: 505 SFSN---PEEALYNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLT 561
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
KTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG
Sbjct: 562 KTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAG 621
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
PGK+ LY GK +V + + E A + L+QLIKD+G W +P
Sbjct: 622 PGKVHLYRGKEIVLKNVPSEIADEKLVQLIKDNGLWQDP 660
>gi|418714778|ref|ZP_13275270.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 08452]
gi|410788952|gb|EKR82657.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 08452]
Length = 663
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/699 (41%), Positives = 411/699 (58%), Gaps = 78/699 (11%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-----------RSGQ---------LPIQKEGEEVDYRGVLHRDG- 413
+ E R+ F + R +G+ LP + ++ L++ G
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 414 -------SVLMSVSL-DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHD 465
S+L+ L DQLK E+ + A + VG+ +++ L +EL S
Sbjct: 362 SLSIEPESILVDSPLPDQLK--EISETATALSIPVGILLSKNVSLNEKLQKELLSF---- 415
Query: 466 ARLALKRLVDISMG--VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR 523
++ + G +++ L E+ L E+ T KL SLR
Sbjct: 416 PKIVFDPFLQFQDGEKMLSFLKERQNAGL--------FSEIHTSGDKL--------DSLR 459
Query: 524 G-DESYEEL---EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
G ++ E+ +L +D+ IL+D R+L LS FP++ H
Sbjct: 460 GLPDTLSEIGIKNVLFSLDSKEILYDY-------------RKLGSILSR--FEFPILLHG 504
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNT 638
F N ++ + + +G LL+DG+GD + + +D + + S++LLQG R+R T
Sbjct: 505 SFSN---PEEALYNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLT 561
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
KTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG
Sbjct: 562 KTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAG 621
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
PGK+ LY GK +V + + E A + L+QLIKD+G W +P
Sbjct: 622 PGKVHLYRGKEIVLKNVPSEIADEKLVQLIKDNGLWQDP 660
>gi|418695636|ref|ZP_13256651.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H1]
gi|421106991|ref|ZP_15567551.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H2]
gi|409956573|gb|EKO15499.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H1]
gi|410007905|gb|EKO61584.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H2]
Length = 663
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/679 (40%), Positives = 404/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRK+R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ +
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNPNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + V+S L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVNSPLPDQLKEISEAAATLSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI + D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTNGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSSFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGARLRLTKTEYISCPSCGRTLFDLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L+QLIKD+G W++P
Sbjct: 642 IADEKLVQLIKDNGLWSDP 660
>gi|418741715|ref|ZP_13298089.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|410751163|gb|EKR08142.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
Length = 665
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/679 (40%), Positives = 403/679 (59%), Gaps = 38/679 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 6 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 66 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 126 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 184
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 185 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 244
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 245 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 304
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 305 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 355
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 356 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 413
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 414 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 466
Query: 550 EDKIG------RVQAARRLFEYLS----ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y +N FP++ H F N ++ + + +G
Sbjct: 467 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 523
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE
Sbjct: 524 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQET 583
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 584 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKNVPSE 643
Query: 719 QATDALIQLIKDHGRWAEP 737
A + L QLIKD+G W++P
Sbjct: 644 IADEKLAQLIKDNGLWSDP 662
>gi|410938682|ref|ZP_11370525.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira noguchii str. 2006001870]
gi|410786228|gb|EKR75176.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira noguchii str. 2006001870]
Length = 663
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 284/683 (41%), Positives = 411/683 (60%), Gaps = 48/683 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKT+ V VG+V +G +PI +Q+M DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTKVVKVGDVPVGGNNPIAIQSMINTDTTDTKGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPFIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I E+FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISEIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESAIEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFDELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ +
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKIPNPNSA 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V VL + S
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIAQFEAGENHPVRVETVLPFENS-------------NS 348
Query: 430 LYKSLAAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSE 486
+++A G P + VDS L +L + + A L++ + +S V L+E
Sbjct: 349 FLENVAKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNE 406
Query: 487 QLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKD-IDATMI 542
+L K L+ ++ + +G +++ L+G ++ + E+ D ID+ +
Sbjct: 407 KLQKE------LLRFPKIVFDPFLQFQDGEKMLSFLKGRQNAGLFSEIHTSGDKIDSLIG 460
Query: 543 LHDLPFNEDKIGRV----QAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGA 594
L D +E I V + L++Y N+ FP++ H F N ++ + +
Sbjct: 461 LPDT-LSETGIKNVLFSLNSKEILYDYRKLGNILSRFEFPILLHGFFSN---PEEALYDS 516
Query: 595 GTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
+G LL+DG+GD + + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF
Sbjct: 517 AIGIGGLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLF 576
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
DLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V +
Sbjct: 577 DLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLK 636
Query: 714 GIAMEQATDALIQLIKDHGRWAE 736
+ E A + L+QLIKD+G W +
Sbjct: 637 NVPSEIADERLVQLIKDNGLWQD 659
>gi|456822073|gb|EMF70568.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. LT1962]
Length = 663
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/683 (41%), Positives = 411/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFN 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+G W +P
Sbjct: 638 VPSEIADEKLVQLIKDNGLWQDP 660
>gi|256419950|ref|YP_003120603.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chitinophaga pinensis DSM 2588]
gi|256034858|gb|ACU58402.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chitinophaga pinensis DSM 2588]
Length = 646
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 310/680 (45%), Positives = 396/680 (58%), Gaps = 54/680 (7%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q Y S+ + R T V VG++ IG+ +PIR+QTMTT DT + GTVE+ +R + GA+
Sbjct: 2 QLYSNSLTEYKRLATLEVKVGDLLIGNNNPIRIQTMTTTDTMNTLGTVEQAIRCIEAGAE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT K+EA+ I+N L ++ Y PLVADIHF P+ A A +K+R+NPGN+
Sbjct: 62 LVRITAPSKKEAENLLPIRNELRKRGYTTPLVADIHFTPNAAEIAARIVEKVRINPGNYV 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE L YTD EY++E+ I + F+PLV+ C+++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 122 DKK-KFETLTYTDAEYEEEIDRIRKQFTPLVKICQEHGTAMRIGTNHGSLSDRIMSRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVESA EF RI L++ N + SMK+SNP VMVQAYRLLV M G YPLHLG
Sbjct: 181 TPMGMVESAMEFLRIAEDLNYRNIVLSMKSSNPQVMVQAYRLLVHTMQDQLGHCYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG+GEDGR+KSA+GIGTLL+DG+GDTIRVSLTE PE E+ CR L A+
Sbjct: 241 VTEAGDGEDGRIKSAVGIGTLLEDGIGDTIRVSLTEDPEFELPVCRDLVKRYTSRAD-HT 299
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
+ E F+++RR G++V V+ D S ++ L Y
Sbjct: 300 PIPAIENVPYSPFEYKRRESIAVNNIGGKQVP---VVVADCSSTSGITPAHLLPVGYNYN 356
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL-----SEQ 487
+ K + A D I REL S AL ++ VI P +E
Sbjct: 357 ADTDKWNIAD-----AAADYIFSRELLS-------FALPG----TLKVIVPHDIWKDAED 400
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSL----RGDESYEELEILKDIDATMIL 543
K +P L T LL V++ G E L + D T++L
Sbjct: 401 KEKYMP----------LFTAEEYLLATDKSAVINFIDHNTGVTLPEALLLQMANDHTIVL 450
Query: 544 HDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLV 603
NE + V RR F L + + PVI F + D+ +I T GALL+
Sbjct: 451 CLHSSNEHAMPEV---RRTFVTLLDRQIQQPVILKC-FADATSSDEHLIHYATETGALLL 506
Query: 604 DGLGDGLLL-------EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
DG GDG L +APG L + +F +LQ R R +KTEY+SCPSCGRTLFDLQ
Sbjct: 507 DGFGDGTWLVSEATGAQAPGH--ALLNNIAFGILQATRTRISKTEYISCPSCGRTLFDLQ 564
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
E +A+IR T+HL GV IAIMGCIVNGPGEMADADFGYVG GKI LY GK VVKRG+
Sbjct: 565 ETTAKIRAVTNHLKGVKIAIMGCIVNGPGEMADADFGYVGSGVGKITLYRGKEVVKRGLN 624
Query: 717 MEQATDALIQLIKDHGRWAE 736
E A D LI LIK++G W E
Sbjct: 625 SEVAVDELISLIKENGMWVE 644
>gi|116328946|ref|YP_798666.1| deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|122283271|sp|Q04YW2.1|ISPG_LEPBL RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116121690|gb|ABJ79733.1| Deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 663
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/681 (42%), Positives = 408/681 (59%), Gaps = 64/681 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I +FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDEELERISAIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L +
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQYGKSFSIEPE 368
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---P 493
+++ P D L+E+ +A AL V I +G L+E+L L P
Sbjct: 369 SILIDSPSPD-------QLKEI-----SEAAAALSIPVGILLGKNVSLNEKLQNELRGFP 416
Query: 494 HAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKD 536
+ +L LQE + G Y + + S +G E+ E+ +L
Sbjct: 417 KVVFDPFLQFQDGKKMLSFLQERQNAGLYTEIHTSGAKIESFKGLPETLSEIGIKNVLFS 476
Query: 537 IDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
I++ IL+D R+L LS++ FP++ H F N ++ + +
Sbjct: 477 IESKEILYDY-------------RKLGSILSQH--EFPILLHGSFSN---PEEALYDSAI 518
Query: 597 NVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
+G LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+L
Sbjct: 519 GIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNL 578
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
QE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + +
Sbjct: 579 QETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNV 638
Query: 716 AMEQATDALIQLIKDHGRWAE 736
E A + L++LIK HG W +
Sbjct: 639 PSEVADEKLVELIKKHGLWQD 659
>gi|116330448|ref|YP_800166.1| deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|122281793|sp|Q04UL2.1|ISPG_LEPBJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116124137|gb|ABJ75408.1| Deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 663
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 290/681 (42%), Positives = 407/681 (59%), Gaps = 64/681 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L +
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQYGKSFSIEPE 368
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---P 493
+++ P D L+E+ +A AL V I +G L+E+L L P
Sbjct: 369 SILIDSPSPD-------QLKEI-----SEAAAALSIPVGILLGKNVSLNEKLQNELRGFP 416
Query: 494 HAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKD 536
+ +L LQE + G Y + + S +G E+ E+ +L
Sbjct: 417 KVVFDPFLQFQDGKKMLSFLQERQNAGLYTEIHTSGAKIESFKGLPETLSEIGIKNVLFS 476
Query: 537 IDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
I++ IL+D R+L LS++ FP++ H F N ++ + +
Sbjct: 477 IESKEILYDY-------------RKLGSILSQH--EFPILLHGSFSN---PEEALYDSAI 518
Query: 597 NVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
+G LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+L
Sbjct: 519 GIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNL 578
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
QE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + +
Sbjct: 579 QETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNV 638
Query: 716 AMEQATDALIQLIKDHGRWAE 736
E A + L++LIK HG W +
Sbjct: 639 PSEVADEKLVELIKKHGLWQD 659
>gi|359689242|ref|ZP_09259243.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749507|ref|ZP_13305795.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae str. MMD4847]
gi|418759490|ref|ZP_13315670.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113981|gb|EIE00246.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274392|gb|EJZ41710.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae str. MMD4847]
Length = 665
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 291/700 (41%), Positives = 399/700 (57%), Gaps = 83/700 (11%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y S RR+TR V VG++ IG +PIR+Q+M T DT+D +V +++ + G ++
Sbjct: 4 RYNYSPFSYQRRRTREVKVGDIGIGGNNPIRIQSMITADTRDTENSVRQILELESAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQPDADNLPNIRKELKRLGSKVPLVADIHFTPSVAMKSVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY++EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYKEELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNKYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF +I L + + + SMKASNP VMVQAYRLL + DYPLHLGVT
Sbjct: 183 PQGMVESAIEFIKIAESLSYKDIIVSMKASNPQVMVQAYRLLCSRFMELQMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL--GMRAAELQ- 371
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ R LA+ +R E Q
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPIHEVPVARLLADKYNRLRFPETQS 302
Query: 372 QGVAPFEEKHRHYFDFQR--RSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
QG + F + + + R + G LP+ E V VL + S SL LK
Sbjct: 303 QGYSEFRNPYSYQRFYSRPIQVGSLPL-GENHAVRIESVLPFESENAFSQSLSSLKN--- 358
Query: 430 LYKSLAAKL-VVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVIT------ 482
+S + +L +V +P D L E S + + MGVI
Sbjct: 359 YARSRSLELEMVSVPLPS----DEFLREECISTSKSSS---------VPMGVIVEQNELL 405
Query: 483 ---------PLSEQLTKPLPH-----------------AMVLVNLQELSTGAYKLLPEGT 516
P + P H + +N+Q + K LPE
Sbjct: 406 LEDVLEDLIPFPKVTVDPFHHFQNRDSLLEFLHKREGKGITELNVQAYQIESLKGLPEEF 465
Query: 517 RLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVI 576
+ G ES + + ILHD R+L LS + ++P+
Sbjct: 466 KNA----GIES-----VTFSVQTFHILHDY-------------RKLARILS--DFDYPIF 501
Query: 577 HHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMR 636
++P+ + + + +G +L DG+GD L ++ + + + F++LQ R+R
Sbjct: 502 LSAEYPD---METALYESSIGIGGMLTDGIGDMLRIKVIDSEPEAVLQLGFDILQATRLR 558
Query: 637 NTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVG 696
TKTEY+SCPSCGRTLFDLQ +A I+EKT HL GV IA+MGCIVNGPGEMADADFGYVG
Sbjct: 559 LTKTEYISCPSCGRTLFDLQTTTARIKEKTGHLKGVKIAVMGCIVNGPGEMADADFGYVG 618
Query: 697 GAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PGK+ LY GK +V + + E+A + L+QLIKD G W E
Sbjct: 619 AGPGKVHLYRGKEIVLKNVPSEEADERLVQLIKDSGMWME 658
>gi|221053991|ref|XP_002261743.1| GcpE protein [Plasmodium knowlesi strain H]
gi|193808203|emb|CAQ38906.1| GcpE protein, putative [Plasmodium knowlesi strain H]
Length = 813
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 293/731 (40%), Positives = 418/731 (57%), Gaps = 80/731 (10%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYCE K R TR V +GN+ IG + I +QTMTT DTK+V V ++ + + GAD
Sbjct: 96 KKYCECTKKYRRLPTREVTIGNIKIGGNNKIAIQTMTTCDTKNVDECVNQIKKCKELGAD 155
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
L+R+TVQG +EA+A + IK L+ +N IPLVADIHF P +++ A+ FDKIRVNPGN+
Sbjct: 156 LIRLTVQGVQEAEASYYIKEKLLAQNITIPLVADIHFNPKISMIAADVFDKIRVNPGNYV 215
Query: 194 DRRAQF-EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D R ++ +++ T +E+ + I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYG
Sbjct: 216 DGRKKWVDKVYKTREEFDEGKLFIQEKFVPLIEKCKRLNRAIRIGTNHGSLSSRVLSYYG 275
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY---VHGWDYPL 309
D+P GMVESAFEF+ +C + +F N +FSMKASN +M+Q+YRLLVA Y G +PL
Sbjct: 276 DTPLGMVESAFEFSDLCIQNNFFNVVFSMKASNAYIMIQSYRLLVARQYKRMTDGLLFPL 335
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGMR-- 366
HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+SLTE P E+ PC+ L N R
Sbjct: 336 HLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRMSLTEDPWNELAPCKTLIKNFKKRVF 395
Query: 367 ------AAELQQGVAP-----------FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVL 409
E V+P FEE R Y ++R ++K GV+
Sbjct: 396 YDDDNRGGEKDGRVSPSPGDTSSTLLNFEEHFRDYNKLKKRK----VEKR------EGVM 445
Query: 410 HRDGSVLMSVSLDQLKAPELLYKSLA------AKLVVGMPFKDLATVDSILLRELPSVDD 463
H + ++ V+ +L+ ++K L L G+ D+ + LREL S
Sbjct: 446 HEEYTIGNVVTEKELEDSLQIFKDLNLEVDQNGNLKKGVKSTDIVIIPQ--LRELSSKSW 503
Query: 464 HD-ARLA---LKRLVDISMGVITPLS---------EQLTKPLPHAMVLVNLQELST---- 506
A+LA + L + G + LS ++ + + + ++L+ + T
Sbjct: 504 TTVAKLAEADMHLLAEYDEGDVAMLSGSTSGSEYTHEMDRVARNTLFYIDLKRMKTILQK 563
Query: 507 --GAYKLLPEGTRLVVSLRGDESYEELE-ILKDIDATMILHDLPF--NEDKIG-RVQAAR 560
G L V+ + G E + +E + I L F D I V R
Sbjct: 564 HEGQIPLHSTAKGYVLMVNGKEDTKLIEDVFNQIKGEKNPRPLFFLLKSDNIHEHVLVTR 623
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-------E 613
R E ++ N++ P +H+ N + DD+++ + VG L+D +GDGL++ +
Sbjct: 624 RFNEIVNSLNIDLPYVHYANI-NSTNYDDMLVDSTLYVGTCLIDLMGDGLIINVTDGHIK 682
Query: 614 APGQDFDFLRD-------TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
A G + +R + N+LQ R R KT+Y+SCPSCGRTLF++QE + +I + T
Sbjct: 683 ADGNPKEEIRSRVELNSFLTLNILQDTRARIFKTDYISCPSCGRTLFNIQETTQKIMKLT 742
Query: 667 SHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
HL GV IA+MGCIVNG GEMADA FGYVG AP KIDLY GK +V+R I E A D L++
Sbjct: 743 GHLKGVKIAVMGCIVNGIGEMADAHFGYVGSAPKKIDLYYGKELVERNIPEEHACDKLVE 802
Query: 727 LIKDHGRWAEP 737
LIK + +W +P
Sbjct: 803 LIKKYNKWQDP 813
>gi|418719558|ref|ZP_13278757.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. UI 09149]
gi|418737758|ref|ZP_13294155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421093651|ref|ZP_15554375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200801926]
gi|410363634|gb|EKP14663.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200801926]
gi|410743601|gb|EKQ92343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. UI 09149]
gi|410746952|gb|EKQ99858.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456889677|gb|EMG00560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200701203]
Length = 663
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 295/685 (43%), Positives = 412/685 (60%), Gaps = 72/685 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRLTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKVGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L KSL+
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQ---YGKSLSI 365
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDD----HDARLALKRLVDISMGVITPLSEQLTKPL 492
+ +SIL+ + PS D +A AL V I +G L+E+L L
Sbjct: 366 E------------PESILI-DSPSPDQLKEISEAAAALSTPVGILLGKNVSLNEKLQNEL 412
Query: 493 ---PHAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---E 532
P + +L L+E + G Y + + SL+G E+ E+
Sbjct: 413 RGFPKIVFDPFLQFQDGKKMLSFLKERQNAGLYTEIHTSGAKIESLKGLPETLSEIGIKN 472
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+L I++ IL+D R+L LS+ FP++ H F N ++ +
Sbjct: 473 VLFSIESKEILYDY-------------RKLGSILSQ--YEFPILLHGSFSN---PEEALY 514
Query: 593 GAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ +G LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRT
Sbjct: 515 DSAIGIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRT 574
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V
Sbjct: 575 LFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIV 634
Query: 712 KRGIAMEQATDALIQLIKDHGRWAE 736
+ + E A + L++LIK HG W +
Sbjct: 635 MKNVPSEVADEKLVELIKKHGLWQD 659
>gi|436836790|ref|YP_007322006.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrella
aestuarina BUZ 2]
gi|384068203|emb|CCH01413.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrella
aestuarina BUZ 2]
Length = 670
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 292/689 (42%), Positives = 392/689 (56%), Gaps = 69/689 (10%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + +RR+T TV +G+V +GS++PIRVQ+MTT DT D G+V + +R+ + G + +
Sbjct: 21 YAPSLTQYIRRETITVNIGDVPMGSDYPIRVQSMTTIDTMDTMGSVAQSIRMIEAGCEYI 80
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + YN PL+ADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 81 RITAPSVKEAQNLDNIRKELRARGYNTPLIADIHFTPNAAELAARLVEKVRINPGNYADR 140
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL+ I E F PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 141 K-RFEHIDYTDAAYAAELERIREKFLPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 199
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + G YPLHLGVT
Sbjct: 200 VGMVESALEFLRICEAENYYNIVLSMKSSNPQVMVQAYRLLVQRLAEEGLKPYPLHLGVT 259
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ-- 372
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + A+
Sbjct: 260 EAGEAEDGRIKSALGIGTLLEDGLGDTVRVSLTEEPEFEAPVAKALIDRYTNRAQTADPI 319
Query: 373 ----GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEV-----DYRGVLHRDGSVLMSV---- 419
G P++ F + RR G V DY L + VL +V
Sbjct: 320 PALTGPLPYDP-----FQYARRQTSEVANFGGSNVPRVIADYSHTLVNETDVLKAVGHFY 374
Query: 420 -------SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
+++ L A L S A+ ++ K++ VD + R +
Sbjct: 375 LPVPDKWAMNDLGADYLYTGSKPAQFMLPNGLKEI--VDYAVWRGHADAAN--------- 423
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELE 532
++ ++T + P + L+ + LL L +LR
Sbjct: 424 ----TLPMLTAAEYLHARHQPQGLHF----RLNFVRFSLLDLNDELAAALR--------- 466
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D + I+H D + RRLF L++ L PV+ + + + L +
Sbjct: 467 --QDRNVVGIVH-----TDNTHALPELRRLFIDLADRQLTLPVVIQRGYTHA-PAEHLPL 518
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
A T+VG LL+DG GDG LL + D L +F +LQ R R TKTEY+SCPSC
Sbjct: 519 YAATDVGGLLIDGFGDGALLCSTRTDDPDELKQLNGLAFGILQAARTRITKTEYISCPSC 578
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY G+
Sbjct: 579 GRTLFDLQETTAMIRQRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGIGRDKIALYRGQ 638
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
VVK+ + +A D LI+LI++ GRW EP
Sbjct: 639 QVVKKSVPAARAVDELIELIREDGRWLEP 667
>gi|45656843|ref|YP_000929.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|421085508|ref|ZP_15546360.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. HAI1594]
gi|421103006|ref|ZP_15563607.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|50400904|sp|Q72TR2.1|ISPG_LEPIC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|45600079|gb|AAS69566.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|410367190|gb|EKP22577.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|410431947|gb|EKP76306.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. HAI1594]
gi|456985684|gb|EMG21433.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Copenhageni str. LT2050]
Length = 663
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 284/683 (41%), Positives = 410/683 (60%), Gaps = 46/683 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD +Y +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLKYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL+DG+GD + + +D + + S++LLQG R+R TKTEY+SCPSCGRTLFD
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFD 577
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V +
Sbjct: 578 LQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVLKN 637
Query: 715 IAMEQATDALIQLIKDHGRWAEP 737
+ E A + L+QLIKD+ W +P
Sbjct: 638 VPSEIADEKLVQLIKDNELWQDP 660
>gi|312129859|ref|YP_003997199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leadbetterella byssophila DSM 17132]
gi|311906405|gb|ADQ16846.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leadbetterella byssophila DSM 17132]
Length = 639
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/670 (42%), Positives = 395/670 (58%), Gaps = 48/670 (7%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + RR T+ V +G++ +GSE+PIR+Q+MTT DT D AG+V + +R+ + G +LV
Sbjct: 4 YCNSLTEYSRRITQQVKIGDLGLGSEYPIRIQSMTTVDTMDTAGSVAQCIRMIESGCELV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA IK L YN PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 64 RITAPSVKEAQNLENIKRELRAAGYNTPLVADIHFTPNAAELAARIVEKVRINPGNYADK 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL I E F+PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 124 K-RFEIIDYTDASYAAELDRIRERFTPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA---EMYVHGWDYPLHLG 312
GMVESA EF +IC +++N + SMK+SNP VMV AYRLLV E +H YPLHLG
Sbjct: 183 AGMVESALEFLKICEDENYYNIVISMKSSNPQVMVHAYRLLVKRLEEEKLH--PYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGEGEDGR+KS++GIGTLL+DGLGDT+RVSLTE PE E +L + R +
Sbjct: 241 VTEAGEGEDGRIKSSMGIGTLLEDGLGDTVRVSLTEDPEFEAPVAEKLVS---RYPSTKI 297
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
P +E H F ++RR + G +V + D S+ +V ++ LKA Y
Sbjct: 298 YSIPAKEDALHPFHYERRIRKEVFNFGGHQVPR---VIADFSLKSNVEIEDLKAIGHFYL 354
Query: 433 SLAAKLVVGMPFKDLATVDS-----ILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
L K + D S +L L + D+ L +E
Sbjct: 355 PLPDKWKMNDLGADYIYTGSNPISFMLPNGLKEIQDYPTWLN---------------AED 399
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
LP L+++++ G K E + + L+ D S E+ ++ +TM +
Sbjct: 400 KVNKLP----LMSIEDYFNGTQK-HAELNFIALELK-DWSEEKANLI----STMENVNFV 449
Query: 548 FNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
QA R + + + PVI + +G+ +++ + A T++G + ++G G
Sbjct: 450 LEAKGATAYQAYRAILSQWATH----PVILRKDY-SGLELEEIQLHASTDLGGIFLEGFG 504
Query: 608 DGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
+G+++ +D L +F +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR++T
Sbjct: 505 EGIMISG-HEDTKALNSLAFGILQASRTRISKTEYISCPSCGRTLFDLQETTAMIRKRTD 563
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL G+ I IMGCIVNGPGEMADAD+GYVG KI LY G+ VVKR + + A D LIQL
Sbjct: 564 HLKGIKIGIMGCIVNGPGEMADADYGYVGIGKDKISLYRGQQVVKRSVPSKDAVDELIQL 623
Query: 728 IKDHGRWAEP 737
IK+ G W EP
Sbjct: 624 IKEDGNWLEP 633
>gi|431797477|ref|YP_007224381.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Echinicola
vietnamensis DSM 17526]
gi|430788242|gb|AGA78371.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Echinicola
vietnamensis DSM 17526]
Length = 661
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 302/687 (43%), Positives = 415/687 (60%), Gaps = 48/687 (6%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
+ + KYC+S+ + RRKT V +G+V IG ++PI VQ+MTT DT D G++EE +R+
Sbjct: 7 IAKTKYCDSLTRYSRRKTIPVQIGDVVIGGDNPIVVQSMTTKDTMDTEGSIEECIRMIKS 66
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPG 190
G +L+RIT +EA+ IK L ++ Y++PLVADIHF P+ A A +K+R+NPG
Sbjct: 67 GCELIRITAPSIKEAENLRHIKAGLAERGYHVPLVADIHFTPNAAEIAARIVEKVRINPG 126
Query: 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
N+AD++ +FE++EYTD+ YQ EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 127 NYADKK-KFEEIEYTDESYQAELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMSR 185
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPL 309
YGD+P GMVESA EF RIC + +H+ + SMK+SN VMVQAYRLLV ++ G+ YPL
Sbjct: 186 YGDTPLGMVESALEFLRICEEEHYHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFQPYPL 245
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA 368
HLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + +R
Sbjct: 246 HLGVTEAGDGEDGRVKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYALRPG 305
Query: 369 ELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPE 428
+ ++P + + +++++R G V + D S + +++ +LK
Sbjct: 306 --HEAISPISDYPLNPYEYEKRESMEVYNVGGTNVPR---VITDISRVENITEKELKNVG 360
Query: 429 LLYKSLAAKLV---VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS 485
Y K VG F + + + LP+ LK ++D++ T L
Sbjct: 361 HFYLPELDKWKMNDVGCDF--VYSGKHPISFMLPN--------GLKEIIDVAQW--TALE 408
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKD-IDATMILH 544
+ H L EL A + L + + L+ E + + +LK D +ILH
Sbjct: 409 DH-----HHKFPAFTLAELE--AAEDLHQALNF-LKLKDTEVEKAIPVLKGRNDVVIILH 460
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
D + A RR + L + PV+ + D ++ A T++G LL+D
Sbjct: 461 S-----DNKHNMPALRRAYIALINAEIRLPVVTEAGYKEQ-DADQTMLYAATDLGGLLID 514
Query: 605 GLGDGLLL---EAPGQDFDFLRDT-------SFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
GLGDG++L E D D L +T SF +LQ R R +KTEY+SCPSCGRTLFD
Sbjct: 515 GLGDGVMLGLEEKAAPDRDALMETIKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTLFD 574
Query: 655 LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
LQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY GK VVKR
Sbjct: 575 LQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVVKRA 634
Query: 715 IAMEQATDALIQLIKDHGRWAEPPAEE 741
+ EQA D LI +I++ G+W EP A E
Sbjct: 635 VPSEQAVDELINIIREDGQWIEPEAVE 661
>gi|441498708|ref|ZP_20980901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fulvivirga
imtechensis AK7]
gi|441437505|gb|ELR70856.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fulvivirga
imtechensis AK7]
Length = 619
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 293/652 (44%), Positives = 385/652 (59%), Gaps = 54/652 (8%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT DT D G+VE+V+R+ D G + VRIT +EA IK L ++ Y +PL+ADI
Sbjct: 1 MTTVDTMDTLGSVEQVIRMVDAGCEYVRITAPSIKEAQNLENIKKELRKRGYQVPLIADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P+ A A +K+RVNPGN+AD++ +F+Q+EYTD+ YQ EL+ I E F+PLV CK
Sbjct: 61 HFTPNAAELAARIVEKVRVNPGNYADKK-KFQQIEYTDESYQAELERIREKFTPLVNICK 119
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+YG A+RIGTNHGSLSDRIMS YGD+P GMVESA EF RIC +L++++ + SMKASN V
Sbjct: 120 EYGTAMRIGTNHGSLSDRIMSRYGDTPLGMVESALEFVRICEELNYYDIVLSMKASNTQV 179
Query: 289 MVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
MVQAYRLLV ++ G YPLHLGVTEAGEGEDGR+KSA+GIG LL+DGLGDT+RVSLT
Sbjct: 180 MVQAYRLLVNKLNEEGLQPYPLHLGVTEAGEGEDGRIKSAVGIGVLLEDGLGDTVRVSLT 239
Query: 348 EPPEKEIDPCRRL-------ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEG 400
E PE E + + A G A + V PF RH + GQ + +
Sbjct: 240 EEPEFEAPVAKTMVHRYYDRAGHGPIAPIDENPVDPFSYGRRHTREVGNVGGQ-NVPRVI 298
Query: 401 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
++ GV RD L + L P+ K L + A V +L L
Sbjct: 299 ADISRLGV--RDYKDLKGIGHFYLPEPD---KWRMNDLGADYIYSGYAPVPFMLPNGLKE 353
Query: 461 VDDHDARLALKRLVD-ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLV 519
+ ++D L V+ + + + + + V V L++L L+
Sbjct: 354 ILEYDTWSTLDDKVNKVPLLTVRQFLNEAHQHNTINFVAVGLKDLD----------AVLL 403
Query: 520 VSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
L+G DAT+IL + ++K G + R FE L NNL PVI
Sbjct: 404 ERLKG-------------DATVIL--VLSTDNKHGLAEQRRAFFE-LIRNNLEIPVIIKR 447
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL----EAPGQDFDFLR-------DTSFN 628
+ + + D L I A T+VG LL+DGLGDG++L A G+ + ++ +T F
Sbjct: 448 SYAD-LTDDQLQIYAATDVGGLLIDGLGDGVMLGTEIAAGGKSREEMQNLVQSYNNTGFG 506
Query: 629 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMA 688
+LQ R R TKTEY+SCPSCGRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMA
Sbjct: 507 ILQAARTRMTKTEYISCPSCGRTLFDLQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMA 566
Query: 689 DADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
DAD+GYVG GKI LY G+ VVKR + E+A D LI++I+ G W E +E
Sbjct: 567 DADYGYVGSGKGKITLYKGQEVVKRSVPSEKAVDELIEIIRQDGNWLEKKSE 618
>gi|255034274|ref|YP_003084895.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dyadobacter fermentans DSM 18053]
gi|254947030|gb|ACT91730.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dyadobacter fermentans DSM 18053]
Length = 664
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/691 (41%), Positives = 391/691 (56%), Gaps = 66/691 (9%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ RR+T T+ +G++ +GS++PIRVQ+MTT DT D G+++EV+R+ + G + V
Sbjct: 12 YCPSLTAYERRRTITIHIGDLPMGSDYPIRVQSMTTVDTMDTQGSIDEVIRMVESGCEYV 71
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+N L + +PL+ADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 72 RITAPSVKEAQNLENIRNGLRKLGIQVPLIADIHFTPNAAELAARIVEKVRINPGNYADR 131
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL+ I E F PLV+ CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 132 K-RFEVIDYTDASYAAELERIREKFIPLVKICKEYGTAMRIGTNHGSLSDRILSRYGDTP 190
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + +++N SMK+SN VMV+AYRLLV + G YPLHLGVT
Sbjct: 191 LGMVESALEFLRICEEFNYYNIALSMKSSNTQVMVEAYRLLVQRLDEEGLKPYPLHLGVT 250
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQG 373
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE R L RA+
Sbjct: 251 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEKEAPVARALIERYATRAS--HAP 308
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL--Y 431
+ P + + F + RR D R V +L L P ++ Y
Sbjct: 309 IEPVDHCPINPFQYTRR-------------DTREVY----------NLGHLNVPRVIADY 345
Query: 432 KSLAAKLVVGMPFKDLATVDSILLRELP---SVDDHDARLALKRLVDISMGVITPLSEQL 488
++ + DL ++ L +P +++D A + + L E L
Sbjct: 346 SNIEVQ-----QLDDLKSIGHFFL-PVPDKWAMNDQGADFIYSGQKPVPFMLPNGLREIL 399
Query: 489 TKP--LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGD-ESYEEL---EILKDIDATMI 542
P L H + + + E + + + GD ++ E E+ + ++
Sbjct: 400 DYPQWLVHPEKHIKFPLFNVADWNAATEVSSELNFIEGDIHTFNEAFLNEVAGKTNIVLV 459
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LH D + RR F L+E PVI + + D L + + T++G LL
Sbjct: 460 LHT-----DNAHAMPEMRRFFYKLTEMKNRLPVIIRRSYQTDLG-DRLTLYSATDIGGLL 513
Query: 603 VDGLGDGLLLEAPGQDFD------------FLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
VDG GDG LL DF +F +LQ R R +KTEY+SCPSCGR
Sbjct: 514 VDGFGDGTLL---CPDFSGAEHAEKLKAAAAYNGIAFGILQAARTRMSKTEYISCPSCGR 570
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLFDLQE +A IR+ T HL GV I IMGCIVNGPGEMADAD+GYVG KI LY G+ V
Sbjct: 571 TLFDLQETTAMIRKHTEHLKGVKIGIMGCIVNGPGEMADADYGYVGMGKDKIALYRGQDV 630
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
+KR + +A + LI+LI++ GRW EP E
Sbjct: 631 IKRSVHSSKAVEELIELIREDGRWIEPEERE 661
>gi|398337530|ref|ZP_10522235.1| deoxyxylulose biosynthesis protein [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 667
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/672 (42%), Positives = 398/672 (59%), Gaps = 36/672 (5%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V +G ++PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRKTREVKVGDVKVGGDNPIVIQSMINSDTTDTQGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPAIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY EL I EVFSPLV +CK+ G A+RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDDELGRISEVFSPLVLRCKELGVAMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F I L +++ + SMKASNP VMVQAYR+L A +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FIAIAESLGYYDIIVSMKASNPQVMVQAYRMLAARFGELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA N E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNSRRTDTEKAKGYSEF---- 308
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
R+ F ++R E+ D + ++ + ++A G
Sbjct: 309 RNPFSYERFYSS--------EIKIGNFEAGDSHPVRVETILPFENTNSFLANVARLYQYG 360
Query: 442 MPFKDLATVDSILLRELPSVDD----HDARLALKRLVDISMGVITPLSEQLTKPLPH--A 495
K L+ +L + P D +A AL V + + L+E+L K L
Sbjct: 361 ---KTLSIEPESILVDSPQPDQLEEISEAANALSIPVGLFLAKNVSLNEKLQKELKRFPK 417
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGD--ESYEELEILKDIDATMI---LHDLPFNE 550
+V + G L R L + S +++E LK + T+ + ++ F+
Sbjct: 418 VVFDPFLQFQDGEKMLAYLKERQNAGLYSEIHTSGDKIESLKGLPETLAESGIKNVLFSL 477
Query: 551 DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL 610
D + R+L LS FP++ H F N +++ + + +G LL+DG+GD +
Sbjct: 478 DTKEILYDYRKLGNILSR--YEFPILLHGSFQN---QEEALYDSAIGIGGLLIDGIGDLI 532
Query: 611 LLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 669
++ P +D + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL
Sbjct: 533 RIQTPSLEDIEETFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHL 592
Query: 670 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E A + L++LIK
Sbjct: 593 KGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEIADEKLVELIK 652
Query: 730 DHGRWAEPPAEE 741
+G W E A E
Sbjct: 653 ANGLWQELSAPE 664
>gi|45737901|gb|AAS75817.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Nicotiana
benthamiana]
Length = 268
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 246/268 (91%)
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
MPFKDLATVDSI LRELP VDD D+RLALKRLVDISMGVITPLSEQLTKPL + MVLV L
Sbjct: 1 MPFKDLATVDSIPLRELPPVDDKDSRLALKRLVDISMGVITPLSEQLTKPLTNVMVLVTL 60
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
+ELS GA KLLPEGTRLVVS+RGDES +ELEILK D TMILH LP+ E+KIGRV AARR
Sbjct: 61 KELSGGAQKLLPEGTRLVVSVRGDESKDELEILKSTDVTMILHHLPYTEEKIGRVHAARR 120
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
LFEYLS+N+LNFPVIHHI FPN HRDDLVIGAG N GALLVDGLGDG+LLEAP QDFDF
Sbjct: 121 LFEYLSQNSLNFPVIHHIHFPNDTHRDDLVIGAGANAGALLVDGLGDGILLEAPDQDFDF 180
Query: 622 LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIV 681
LR+TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA+IREKTSHLPGVSIAIMGCIV
Sbjct: 181 LRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIV 240
Query: 682 NGPGEMADADFGYVGGAPGKIDLYVGKT 709
NGPGEMADADFGYVGGAPGKIDLY GKT
Sbjct: 241 NGPGEMADADFGYVGGAPGKIDLYDGKT 268
>gi|15834947|ref|NP_296706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Nigg]
gi|270285119|ref|ZP_06194513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Nigg]
gi|270289140|ref|ZP_06195442.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Weiss]
gi|301336514|ref|ZP_07224716.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum MopnTet14]
gi|14194762|sp|Q9PKY3.1|ISPG_CHLMU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|7190369|gb|AAF39191.1| gcpE protein [Chlamydia muridarum Nigg]
Length = 601
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 277/660 (41%), Positives = 371/660 (56%), Gaps = 77/660 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +V VGN+ +GSEH I++Q+MTT T DV GTV ++ + + G ++VR+TVQG +E
Sbjct: 11 RRKTLSVKVGNLFVGSEHSIKIQSMTTTATTDVEGTVRQIYALQECGCEIVRVTVQGLKE 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AC +IK+ LVQ+N IPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F Y
Sbjct: 71 VGACEQIKDRLVQQNVTIPLVADIHFFPQAAIHVADFVDKVRINPGNYVDKRNMFSGKIY 130
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D++Y + L+ + E FSPLV KCK+ GRA+RIG NHGSLS+RIM YGD+ GMV SA E
Sbjct: 131 SDEQYTRSLERLFEKFSPLVAKCKRLGRAMRIGVNHGSLSERIMQRYGDTIEGMVFSALE 190
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+A +C +D+HN +FSMK+SNP MV AYR L E+ W YPLHLGVTEAG G DG +
Sbjct: 191 YAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALARELDQRKWLYPLHLGVTEAGSGMDGMI 250
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KS++GIGTLL +GLGDTIR SLT P EI C L + ++ + PFE H
Sbjct: 251 KSSVGIGTLLSEGLGDTIRCSLTGSPTLEIPVCLDLLKETAKYSKSTKKYNPFEIYHSKQ 310
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA--PELLYKSLAAKLVVGM 442
Q P++ + G L+ ++ D L P L + L + G
Sbjct: 311 LTTQTTPKHFPVE------NVYG-------FLVGLTKDHLLTIEPNTLLQCLGVDITTGK 357
Query: 443 PFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQ 502
KDL + D GV+ P K + + ++ ++
Sbjct: 358 --KDLTSPD---------------------------GVVIP------KSMRSSAIVSEIE 382
Query: 503 ELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD----LPFNEDKIGRVQA 558
+ YK E+ IL +++ + L D PF ++ +
Sbjct: 383 KHLRIFYK------------------EDAPILNEMNEELWLSDKTLATPFVYFEVESIYQ 424
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQD 618
ARR F N + PV + ++ I +GALL+DGLG +L D
Sbjct: 425 ARRFFAL--RQNYSQPVCLSFSLKANLSKNSAAIDLSIRLGALLLDGLGSCVLFNF--SD 480
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIM 677
R F++LQ +R+T EY+SCP CGRTLFDL E+S I+E+T HLP G+ IA+M
Sbjct: 481 LKLARTLGFSILQSANIRSTTVEYISCPGCGRTLFDLPEVSQRIKERTKHLPGGLKIAVM 540
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GCIVNGPGEMADADFGYVG PG IDLYV VK + ME A + LIQL+K+HG W EP
Sbjct: 541 GCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSYVPMENAEEELIQLLKEHGVWKEP 600
>gi|421100425|ref|ZP_15561048.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira borgpetersenii str. 200901122]
gi|410796228|gb|EKR98364.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira borgpetersenii str. 200901122]
Length = 663
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 288/678 (42%), Positives = 402/678 (59%), Gaps = 58/678 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKVGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G A+RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVAMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLADKFNRKIAKPESAIGYSEFRNPF 312
Query: 382 RHYFDFQRRSGQLPIQKEGEE--VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
Y F R+ ++ + GE V VL + S S L + KSL+ +
Sbjct: 313 -TYEKFYSRAIKIGTFEAGENHPVRVETVLPFENS---SSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPNQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERQNAGLYTEIHTSGAKIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS FP++ H F N ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILSR--YEFPILLHGSFSNP---EEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + ++ P +D + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIKEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 642 VADEKLVELIKEQGLWQD 659
>gi|456863573|gb|EMF82040.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii serovar Topaz str. LT2116]
Length = 663
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 285/678 (42%), Positives = 404/678 (59%), Gaps = 58/678 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKPDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S ++ +L KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENSNSFLANIAELYQ---YGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERQNAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPNP---EEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 642 VADEKLVELIKEQGLWQD 659
>gi|398331366|ref|ZP_10516071.1| deoxyxylulose biosynthesis protein [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 663
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 277/670 (41%), Positives = 408/670 (60%), Gaps = 42/670 (6%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA+ R A+ + + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLADKFNRRIAKPESAIGYSE--FRN 310
Query: 384 YFDFQR---RSGQLPIQKEGEE--VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKL 438
F ++R R+ ++ + GE V VL + S + L + KSL+ +
Sbjct: 311 PFTYERFYSRAIKIGTFEAGENHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE- 366
Query: 439 VVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
+ +DS +L + + A L+ I +G++ + L + L + L
Sbjct: 367 ------PESILIDSPSPHQLKEISEAAAALS------IPVGILLEKNVSLNEKLQNE--L 412
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYE-ELEILKDIDATMILHDLPFNEDKIG--- 554
++ + +G +++ L+ ++ E EI + L LP +IG
Sbjct: 413 RRFPKVVFDPFLQFQDGEKMLSFLKERQNAELYTEIHTNGARIESLKGLPETLSEIGIKN 472
Query: 555 ---RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
+++ L++Y ++ FP++ H F N ++ + + +G LL+DG+G
Sbjct: 473 VLFSIESKEILYDYRKLGSILSHYEFPILLHGSFSNP---EEALYDSAIGIGGLLIDGIG 529
Query: 608 DGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
D + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A+I+ +T
Sbjct: 530 DLIRIKTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTAKIKSRT 589
Query: 667 SHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E A + L++
Sbjct: 590 GHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVE 649
Query: 727 LIKDHGRWAE 736
LIK+ G W +
Sbjct: 650 LIKEQGLWQD 659
>gi|417779128|ref|ZP_12426920.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii str. 2006001853]
gi|410780463|gb|EKR65050.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii str. 2006001853]
Length = 663
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 285/678 (42%), Positives = 404/678 (59%), Gaps = 58/678 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKRDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S + L + KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ VDS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESIIVDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQEL-STGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERENAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPNP---EEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + +
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSK 641
Query: 719 QATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 642 VADEKLVELIKEQGLWQD 659
>gi|398344642|ref|ZP_10529345.1| deoxyxylulose biosynthesis protein [Leptospira inadai serovar Lyme
str. 10]
Length = 665
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 281/681 (41%), Positives = 397/681 (58%), Gaps = 45/681 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y S RR+TR V VG++ +G +PIR+Q+M T DT+D +V +++ + + G ++
Sbjct: 4 RYNHSPFSHKRRRTREVKVGDIGVGGNNPIRIQSMITADTRDTENSVRQILELEEAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQPDADNLPNIRKELKRIGSKVPLVADIHFTPSVAMKSVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +Y+D EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYSDLEYTEELERIAEVFSPLVSRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI + + + + SMKASNP VM+QAYRLL + DYPLHLGVT
Sbjct: 183 PMGMVESAIEFIRIAEAVGYKDIIVSMKASNPQVMIQAYRLLCSRFLELQMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQQG 373
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA + G
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPIHEIPVARYLAETYNTKLFPEANG 302
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
++ E R+ + +QR + PI+ E+ + + S+ +P
Sbjct: 303 ISYSE--FRNPYTYQRFYSK-PIRVSSVEIGENHPVRIE-------SVFNFSSPGEFSNQ 352
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT---- 489
L+ K+ A S+ + EL SV L + L++IS +TP+ L
Sbjct: 353 LSN-------LKNFAKNRSLEV-ELASVPFPADSLQREELLEISKSSLTPIGVILEQHEL 404
Query: 490 ---------KPLPHAMV-----LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
KP P + N+ L+ + L EG L E L L
Sbjct: 405 LFENDLEDLKPFPKITIDPFYHFQNIDALTD--FLKLREGRGLTELSVQSYQIESLNGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
++ + + F+ + R+L LS++ ++P++ +F ++ + +
Sbjct: 463 EVFKENGIESIAFSLRTPHILHDYRKLARILSDS--DYPIVLAGEFET---QEAALFESS 517
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
+G LLVDG+GD L + D + + F+LLQ R+R TKTEY+SCPSCGRTLFDL
Sbjct: 518 IGLGGLLVDGIGDLLRIRIADSDPESVLQLGFDLLQATRLRLTKTEYISCPSCGRTLFDL 577
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGI 715
Q +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + +
Sbjct: 578 QTTTARIKARTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYKGKEIVLKNV 637
Query: 716 AMEQATDALIQLIKDHGRWAE 736
E+A + L+QLIK+ G W E
Sbjct: 638 PSEEADEKLVQLIKESGMWIE 658
>gi|359727531|ref|ZP_09266227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
weilii str. 2006001855]
Length = 663
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 285/678 (42%), Positives = 403/678 (59%), Gaps = 58/678 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKPDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S + L + KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQEL-STGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERENAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPNP---EEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQET 581
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 582 TARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSE 641
Query: 719 QATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 642 VADEKLVELIKEQGLWQD 659
>gi|392964654|ref|ZP_10330074.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrisoma
limi BUZ 3]
gi|387846037|emb|CCH52120.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrisoma
limi BUZ 3]
Length = 687
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 300/702 (42%), Positives = 401/702 (57%), Gaps = 80/702 (11%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + VRRKT TV +G+V +GS++PIRVQ+MTT DT D G+VE+ +R+ + G + V
Sbjct: 21 YTPSLTEYVRRKTITVTIGDVPMGSDYPIRVQSMTTIDTMDTLGSVEQTIRMIEAGCEYV 80
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + Y PLVADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 81 RITAPSVKEAQNLENIRKELRGRGYTTPLVADIHFTPNAAELAARIVEKVRINPGNYADR 140
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE +EYTD Y EL I E F PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 141 K-RFEHIEYTDASYAAELDRIREKFLPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 199
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + G YPLHLGVT
Sbjct: 200 VGMVESALEFLRICEDENYYNIVLSMKSSNPQVMVQAYRLLVQRLDEEGLKPYPLHLGVT 259
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE+E + L + A +
Sbjct: 260 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEREAPVAKALIDRYTHRASHSAPI 319
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEV-----DYRGVLHRDGSVLMSVS--------- 420
+ F + RR+ G V D+ V D VL +
Sbjct: 320 PAVTTYPINPFQYTRRATLETANIGGGNVPRVIADFSHVPVTDHEVLRPIGHFYLPVPDK 379
Query: 421 --LDQLKAPELLYKSLAAKLVVGMPFKDL-------ATVDSILLRELPSVD------DHD 465
++ L A + S A+ ++ K++ D + L +VD D
Sbjct: 380 WRMNDLGADYIYTGSQPAQFMLPNGLKEILDYAVWQTVADQVNTFPLLTVDEYLNGSDRH 439
Query: 466 ARLALKRLVDISMGVITPLSEQLTKPLPHAMV--LVNLQELSTGAYKLLPEGTRLVVSLR 523
RL R+ L LP + L +L L+ GT L+ +L+
Sbjct: 440 PRLNFVRV-------------SLNDLLPRQIFGQLTDLSPLT---------GTDLLNALQ 477
Query: 524 GDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPN 583
D + + +L D + +L RRLF L N + PV+ +P+
Sbjct: 478 NDRT---VVLLAQTDNAHAMPEL-------------RRLFVELINNGITTPVVIQRSYPD 521
Query: 584 GIHRDDLVIGAGTNVGALLVDGLGDGLLL-------EAPG-QDFDFLRDTSFNLLQGCRM 635
+ +D+ + A T++G LLVDGLGDG++L E P ++ L + +F +LQ R
Sbjct: 522 -VPSEDIPLFAATDLGGLLVDGLGDGVMLSPALTQAEPPTPENLKSLNNLAFGILQAART 580
Query: 636 RNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYV 695
R TKTEY+SCPSCGRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYV
Sbjct: 581 RITKTEYISCPSCGRTLFDLQETTAMIRQRTDHLKGVKIGIMGCIVNGPGEMADADYGYV 640
Query: 696 GGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
G KI LY G+ V+K+ + ++A D LI+LI++ RW EP
Sbjct: 641 GIGRDKIALYRGQQVIKKSVPADRAVDELIELIREDDRWIEP 682
>gi|346226057|ref|ZP_08847199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerophaga
thermohalophila DSM 12881]
Length = 626
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 272/673 (40%), Positives = 378/673 (56%), Gaps = 67/673 (9%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + +R KT V GN+ IG + PIR+Q+MTT +T + T E+ RIAD G +LV
Sbjct: 8 YCNSFFQYLRNKTVPVKAGNITIGGDSPIRIQSMTTTNTLNTRETSEQTKRIADAGGELV 67
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT QG+REA IK +L Y+IPLVAD+HF PS A AE +K+R+NPGNF
Sbjct: 68 RITTQGRREALNLKNIKEALQSAGYDIPLVADVHFNPSAAETAAEIVEKVRINPGNFTGG 127
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+F Q+E E + +Q I E P + CKK+ A+RIG NHGSLSDRIMS YGD+P
Sbjct: 128 AKKFRQIETGSPEDKAGMQQIREKLVPFLHHCKKHNTAIRIGVNHGSLSDRIMSKYGDTP 187
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVES E+ RIC++ +F N + S+KASN +MV A RLLV M +PLHLGVTE
Sbjct: 188 EGMVESCMEYLRICKEENFENIVLSVKASNTRIMVHAVRLLVQRMQNEHMYFPLHLGVTE 247
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG GEDGR+KSA+GIG LL DG+GDTIRVSLTEPPE EI ++L +R + G A
Sbjct: 248 AGSGEDGRLKSAVGIGALLIDGIGDTIRVSLTEPPENEIPVAQKL----VRYVVQKTGHA 303
Query: 376 PFEEKH-RHY--FDFQRRSGQLPIQKEGEE-----VDYRGVLHRDGSVLMSVSLDQLKAP 427
P + +HY + +R + + GE D R R+ ++ + P
Sbjct: 304 PIRGTNPQHYSPLSYVKRVSEPVLHIGGENPVAVVADIRNTDDRE--------INFSEPP 355
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD---ISMGVITPL 484
EL+ + A + +P K+L+ ++ + + + L R+ D + G+
Sbjct: 356 ELIICNPAQ---LNLPHKNLSGALQLVEYKYYEEEKRNGVFPLFRIHDDWHLFQGI---- 408
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
A V + EL+ L E +++ LR ++++T
Sbjct: 409 ----------AFVEITYPELTERNINRLREKKDVILILRSG----------NVNSTA--- 445
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
R F + L PVI H + + + +D + A + GAL +D
Sbjct: 446 -------------EQRAFFMTMQNAGLKHPVIIHGHYEDKM-SEDFQLKAAADKGALFLD 491
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
G GDG+ L AP + +TSF +LQ R+R +KTE++SCP CGRTLF+LQ+ + +IR+
Sbjct: 492 GYGDGICLNAPFIRIGDVVNTSFGILQASRVRFSKTEFISCPGCGRTLFELQKTTEKIRK 551
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
+TSHL G+ IA+MGCIVNG GEMADAD+GYVG PGKI L+ + ++K+ + E+A + L
Sbjct: 552 ETSHLKGLKIAVMGCIVNGIGEMADADYGYVGAGPGKISLFHNRQLIKKNVPEEEAVETL 611
Query: 725 IQLIKDHGRWAEP 737
I LIK G W EP
Sbjct: 612 IDLIKSFGDWNEP 624
>gi|156082095|ref|XP_001608540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (GcpE)
[Plasmodium vivax Sal-1]
gi|148801111|gb|EDL42516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (GcpE),
putative [Plasmodium vivax]
Length = 820
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 288/749 (38%), Positives = 416/749 (55%), Gaps = 99/749 (13%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYCE + R TR V + N+ IG + I +QTMTT DT++V V ++ + + GAD
Sbjct: 86 KKYCECTKRYRRLPTREVPIDNIKIGGSNKIAIQTMTTCDTRNVDECVYQIKKCKELGAD 145
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
L+R+TVQG +EA+A + IK L+ +N IPLVADIHF P ++L A+ FDKIR+NPGN+
Sbjct: 146 LIRLTVQGVQEAEASYHIKEKLLAQNITIPLVADIHFNPKISLMAADVFDKIRINPGNYV 205
Query: 194 D-RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D R+ ++ T +E+ + I+E F PL+EKCK+ RA+RIGTNHGSLS R++S+YG
Sbjct: 206 DGRKKWINKIYKTREEFDQGKLFIQEKFIPLIEKCKRLNRAIRIGTNHGSLSSRVLSFYG 265
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV---HGWDYPL 309
D+P GMVESAFEF+ +C + +F N +FSMKASN +M+Q+YRLLVA Y +G +PL
Sbjct: 266 DTPLGMVESAFEFSDLCVQNNFFNVVFSMKASNAYIMIQSYRLLVARQYERMGNGLLFPL 325
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGMR-- 366
HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+SLTE P +E+ PC+ L NL R
Sbjct: 326 HLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRISLTEDPWEELTPCKTLIKNLKKRVF 385
Query: 367 ------AAELQQGVAP-----------FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVL 409
E V+P FEE R++ +R+ ++K GVL
Sbjct: 386 YDDHNEGGEEDGRVSPPGGSTSSKLLSFEEHFRNFNKMAKRN----VEKR------EGVL 435
Query: 410 HRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHD--- 465
H + ++ V+ +L+ ++K L +L K A + D +++ +L +
Sbjct: 436 HEECTIGNVVTEKELEDSLQIFKDLNLELDQNGNLKKGAKSTDIVVVPKLGGLSGRSWAT 495
Query: 466 -ARLA---LKRLVDISMGVITPLSEQLTKPLP---HAMVLVNLQELST------GAYKLL 512
RLA + L + G + LS P + + NL + T G L
Sbjct: 496 LGRLAEAGVHLLAEYDEGDVAMLSSTTKGMDPVARNTLFYANLNHMQTLLQKHGGRIPLH 555
Query: 513 PEGTRLVVSLRGDESYEELE-ILKDIDAT--MILHDLPFNEDKIGRVQAARRLFEYLSEN 569
V+ + G E +E + + + L L ++ V A RR E ++
Sbjct: 556 SAAKGYVLLVNGKEDTHLVEQVFNQMKGKNPLPLFFLLKSDSIYEHVIATRRFNEIVNSL 615
Query: 570 NLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL----------------- 612
+N P +H+ + + DD+++ + +VG L+D +GDGL++
Sbjct: 616 RINVPYVHYANVTSTSY-DDMLVDSTLHVGTCLIDLMGDGLIINVASGEMKLSGHSKGGA 674
Query: 613 -------------EAPGQDFD-----------FLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
EAP + + FL + N+LQ R R KT+Y++CPSC
Sbjct: 675 KEAVKEAVSAGVKEAPNEAANEGAPSRVALNSFL---ALNILQDTRARLFKTDYIACPSC 731
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF++QE + I + T HL GV IA+MGCIVNG GEMADA FGYVG AP KIDLY GK
Sbjct: 732 GRTLFNIQETTKRIMQLTGHLKGVKIAVMGCIVNGIGEMADAHFGYVGSAPKKIDLYYGK 791
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+V+R I E A D L++LIK H +W +P
Sbjct: 792 ELVERNIPEEHACDKLVELIKKHNKWQDP 820
>gi|456874781|gb|EMF90050.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. ST188]
Length = 680
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/677 (41%), Positives = 406/677 (59%), Gaps = 56/677 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 31 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 91 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 149
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 150 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 209
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 210 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 269
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 270 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 325
Query: 382 RHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F +QR S ++ I E V VL + S S A
Sbjct: 326 RNPFAYQRFYSSEIKIGSFEAGENHPVRVETVLPFENS-----------------DSFLA 368
Query: 437 KLVVGMPF-KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ F K L+ +L + PS D + + I +G++ + L + L +
Sbjct: 369 NVARLFRFGKSLSIEPESILVDSPSPDRLKEISEVATTLSIPVGILLEKNVSLNEKLQNE 428
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKDIDATMI--LHDLPFNE 550
L +++ + +G R++ L+ ++ Y E+ + T + L LP
Sbjct: 429 --LRRFPKIAFDPFLQFQDGERMLSFLKERQNAGLYTEIH----TNGTRMESLKGLPETL 482
Query: 551 DKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
+IG +++ L++Y N+ FP++ H F + ++ + + +G
Sbjct: 483 SEIGIKNVLFSIESKEILYDYRKLGNILSLYEFPILLHGSFQSS---EEALYDSAIGIGG 539
Query: 601 LLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +
Sbjct: 540 LLIDGIGDIIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETT 599
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 600 ARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEV 659
Query: 720 ATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 660 ADEKLVELIKEQGLWQD 676
>gi|410449016|ref|ZP_11303082.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira sp. Fiocruz LV3954]
gi|410017136|gb|EKO79202.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira sp. Fiocruz LV3954]
Length = 680
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 277/677 (40%), Positives = 406/677 (59%), Gaps = 56/677 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 31 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 91 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 149
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 150 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 209
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 210 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 269
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 270 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 325
Query: 382 RHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F +QR S ++ I E V VL + S S A
Sbjct: 326 RNPFTYQRFYSSEIKIGSFEAGENHPVRVETVLPFENS-----------------DSFLA 368
Query: 437 KLVVGMPF-KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ F K L+ +L + PS D + + I +G++ + L + L +
Sbjct: 369 NVARLFRFGKSLSIEPESILVDSPSPDRLKEISEVATTLSIPVGILLEKNVSLNEKLQNE 428
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKDIDATMI--LHDLPFNE 550
L +++ + +G +++ L+ ++ Y E+ + T + L LP
Sbjct: 429 --LRRFPKVAFDPFLQFQDGEKMLSFLKERQNAGLYTEIH----TNGTRMESLKGLPETL 482
Query: 551 DKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
+IG +++ L++Y N+ FP++ H F + ++ + + +G
Sbjct: 483 SEIGIKNVLFSIESKEILYDYRKLGNILSLYEFPILLHGSFQSS---EEALYDSAIGIGG 539
Query: 601 LLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +
Sbjct: 540 LLIDGIGDIIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETT 599
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 600 ARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEV 659
Query: 720 ATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 660 ADEKLVELIKEQGLWQD 676
>gi|359685154|ref|ZP_09255155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai str. 2000030832]
Length = 663
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/673 (41%), Positives = 404/673 (60%), Gaps = 48/673 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA--ELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA+ R A E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRVANPESAKGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F +QR S ++ I E V VL + S S A
Sbjct: 309 RNPFTYQRFYSSEIKIGSFEAGENHPVRVETVLPFENS-----------------DSFLA 351
Query: 437 KLVVGMPF-KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ F K L+ +L + PS D + + I +G++ + L + L +
Sbjct: 352 NVARLFRFGKSLSIEPESILVDSPSPDRLKEISEVATTLSIPVGILLEKNVSLNEKLQNE 411
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDE-SYEELEILKDIDATMILHDLPFNEDKIG 554
L +++ + +G +++ L+ + S EI + L LP +IG
Sbjct: 412 --LRRFPKVAFDPFLQFQDGEKMLSFLKERQNSGLYTEIHTNGTRMESLKGLPETLSEIG 469
Query: 555 ------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
+++ L++Y N+ FP++ H F + ++ + + +G LL+D
Sbjct: 470 IKNVLFSIESKEILYDYRKLGNILSLYEFPILLHGSFQSS---EEALYDSAIGIGGLLID 526
Query: 605 GLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 663
G+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+
Sbjct: 527 GIGDIIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIK 586
Query: 664 EKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDA 723
+T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E A +
Sbjct: 587 SRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEK 646
Query: 724 LIQLIKDHGRWAE 736
L++LIK+ G W +
Sbjct: 647 LVELIKEQGLWQD 659
>gi|418745318|ref|ZP_13301658.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. CBC379]
gi|421113302|ref|ZP_15573747.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. JET]
gi|422005005|ref|ZP_16352210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|410793780|gb|EKR91695.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. CBC379]
gi|410801305|gb|EKS07478.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. JET]
gi|417256311|gb|EKT85741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai serovar Shermani str. LT 821]
Length = 663
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 277/677 (40%), Positives = 406/677 (59%), Gaps = 56/677 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F +QR S ++ I E V VL + S S A
Sbjct: 309 RNPFTYQRFYSSEIKIGSFEAGENHPVRVETVLPFENS-----------------DSFLA 351
Query: 437 KLVVGMPF-KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ F K L+ +L + PS D + + I +G++ + L + L +
Sbjct: 352 NVARLFRFGKSLSIEPESILVDSPSPDRLKEISEVATTLSIPVGILLEKNVSLNEKLQNE 411
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKDIDATMI--LHDLPFNE 550
L +++ + +G +++ L+ ++ Y E+ + T + L LP
Sbjct: 412 --LRRFPKVAFDPFLQFQDGEKMLSFLKERQNAGLYTEIH----TNGTRMESLKGLPETL 465
Query: 551 DKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
+IG +++ L++Y N+ FP++ H F + ++ + + +G
Sbjct: 466 SEIGIKNVLFSIESKEILYDYRKLGNILSLYEFPILLHGSFQSS---EEALYDSAIGIGG 522
Query: 601 LLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +
Sbjct: 523 LLIDGIGDIIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETT 582
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 583 ARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEV 642
Query: 720 ATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 643 ADEKLVELIKEQGLWQD 659
>gi|418753751|ref|ZP_13309992.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. MOR084]
gi|409965874|gb|EKO33730.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. MOR084]
Length = 663
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/677 (41%), Positives = 407/677 (60%), Gaps = 56/677 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA--ELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA+ R A E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRVANPESAKGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F +QR S ++ I E V VL + S S A
Sbjct: 309 RNPFTYQRFYSSEIKIGSFEAGENHPVRVETVLPFENS-----------------DSFLA 351
Query: 437 KLVVGMPF-KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ F K L+ +L + PS D + + I +G++ + L + L +
Sbjct: 352 NVARLFRFGKSLSIEPESILVDSPSPDRLKEISQVATTLSIPVGILLEKNVSLNEKLQNE 411
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKDIDATMI--LHDLPFNE 550
L +++ + +G +++ L+ ++ Y E+ + T + L LP
Sbjct: 412 --LRRFPKVAFDPFLQFQDGEKMLSFLKERQNAGLYTEIH----TNGTRMESLKGLPETL 465
Query: 551 DKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
+IG +++ L++Y N+ FP++ H F + ++ + + +G
Sbjct: 466 SEIGIKNVLFSIESKEILYDYRKLGNILSLYEFPILLHGSFQSS---EEALYDSAIGIGG 522
Query: 601 LLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
LL+DG+GD + ++ P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +
Sbjct: 523 LLIDGIGDIIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETT 582
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PGK+ LY GK +V + + E
Sbjct: 583 ARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEV 642
Query: 720 ATDALIQLIKDHGRWAE 736
A + L++LIK+ G W +
Sbjct: 643 ADEKLVELIKEQGLWQD 659
>gi|371776053|ref|ZP_09482375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerophaga
sp. HS1]
Length = 626
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/667 (40%), Positives = 376/667 (56%), Gaps = 49/667 (7%)
Query: 74 QKY--CESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQG 131
QKY C+S + R KT V VGNV IG + PIRVQ+MTT +T D A TVE+ ++IA G
Sbjct: 4 QKYHFCQSYFQYCRNKTAPVKVGNVTIGGDSPIRVQSMTTTNTLDTAATVEQSLKIARAG 63
Query: 132 ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGN 191
+LVRIT QG+REA IK SL + +PLVAD+HF PS A A+ +K+R+NPGN
Sbjct: 64 GELVRITTQGRREALNLKSIKESLTRLGCEVPLVADVHFNPSAADIAAQLIEKVRINPGN 123
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F +F +E +E ++ L+ I + P + +CKK+ A+RIG NHGSLSDRIMS Y
Sbjct: 124 FTGGAKKFRHIEAGSEEDREGLEQIRQKLIPFLRQCKKHFTAIRIGVNHGSLSDRIMSKY 183
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVES E+ RICR+ +F++ + S+K+SN VMV RLLV M YP+HL
Sbjct: 184 GDTPEGMVESCMEYLRICREENFNDVVLSIKSSNTRVMVHTVRLLVHRMGEENMSYPIHL 243
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ 371
GVTEAG GEDGR+KSA+GIG LL DG+GDT+RVSLTEPPE EI + L + + A
Sbjct: 244 GVTEAGSGEDGRLKSAVGIGALLIDGIGDTLRVSLTEPPENEIPVAKSLVHYISKKAN-H 302
Query: 372 QGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-PELL 430
VA +H + ++++ +V+ G G +++V+ D PELL
Sbjct: 303 PPVAETNPQHYSPCSY--------VKRQTHQVETIG-----GENVVAVAADIRNVPPELL 349
Query: 431 YKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTK 490
++++ S + LP + H+ RL + E +
Sbjct: 350 QFHTLPEVII---------CHSNQINHLPE-NLHNTRLVV---------------EHQSN 384
Query: 491 PLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNE 550
H + L ++ + +G V D + L+ T++L
Sbjct: 385 KFGHKPGTIPLFKIDEEWHHF--DGPVFVELTYPDLNSHNANRLRSKKDTVLL----LKS 438
Query: 551 DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL 610
+ I R F + L+ PVI H + + + D + A + G L +DG GDGL
Sbjct: 439 NNINSTAEQRAFFMTMQNLGLSHPVIIHGYYEDK-NLKDFQLKAAADKGLLFLDGYGDGL 497
Query: 611 LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP 670
L P TSF +LQ R+R TKTE++SCP CGRTLFDLQ+ + +I++KTSHL
Sbjct: 498 CLSTPNITTSQAIQTSFGILQASRVRFTKTEFISCPGCGRTLFDLQKTAEKIQKKTSHLK 557
Query: 671 GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
G+ IAIMGCIVNG GEMADAD+GYVG PG+I L+ + ++K+ I EQA + LI+LIK
Sbjct: 558 GLKIAIMGCIVNGIGEMADADYGYVGAGPGRISLFRNRELIKKSIPEEQAVNELIKLIKS 617
Query: 731 HGRWAEP 737
+G W +P
Sbjct: 618 YGDWVDP 624
>gi|409195659|ref|ZP_11224322.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinilabilia
salmonicolor JCM 21150]
Length = 623
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/670 (40%), Positives = 368/670 (54%), Gaps = 61/670 (9%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+C+S + R KT V VGNV IG ++P+ +Q+MTT +T D TVE+ ++I++ G +L
Sbjct: 6 NFCDSYFQYNRLKTDPVNVGNVIIGGDNPVIIQSMTTTNTLDTLATVEQGIKISEAGGEL 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT QG+REA IK L+++N +PLVAD+HF P+ A A +K+R+NPGNF
Sbjct: 66 VRITTQGRREATNLEFIKKGLMERNCTVPLVADVHFNPAAAEIAATLIEKVRINPGNFTG 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+F+++ ++ Q+ L+ I E P + C+K+G A+RIGTNHGSLSDR+MS +GD+
Sbjct: 126 GAKKFKEVVAGSEKDQEGLRQIREKLVPFLRLCQKHGTAIRIGTNHGSLSDRMMSKFGDT 185
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVES E+ RIC++ DF N + S+K+SN VMV RLLVA M YPLHLGVT
Sbjct: 186 PEGMVESCMEYLRICKEEDFKNIVLSIKSSNTRVMVHTVRLLVAAMKREDMRYPLHLGVT 245
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQQG 373
EAG GEDGR+KSA+GIG LL DG+GDTIRVSLTEPPE EI L + G RA +
Sbjct: 246 EAGSGEDGRLKSAVGIGALLSDGIGDTIRVSLTEPPENEIPVAAMLVEHYGKRAGHVP-- 303
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
V P E F +Q+RS + GE P +
Sbjct: 304 VPPVETDFYSPFKYQKRSTHQVVNVGGE------------------------MPAAVVVD 339
Query: 434 LAAKLVV--GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
+ K ++ GM ++ D L LP ++ + S V+ PL E
Sbjct: 340 VRGKPIISEGMETPEIVICDHDQLSGLPESWADVIKVVPAESYEDSSSVVYPLFEVDENW 399
Query: 492 LPHAMVL---VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
+ L +L+ G +LL E +V+ L D P
Sbjct: 400 ISQEGALFLECRNSDLTAGMKELLKEKKNVVILLESDH--------------------PN 439
Query: 549 NEDKIGRVQAARRLFEYLSEN-NLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
N A RR F +N L PVI Q + +D + + + G L +DG G
Sbjct: 440 N-------TADRRAFFLTMQNEGLTHPVIVS-QTYDECTDEDFQLKSAADSGLLFLDGYG 491
Query: 608 DGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
DG+ L Q + T F +LQ R+R +KTEY+SCP CGRTLFDLQ +A++R +T
Sbjct: 492 DGIALTGFLQSVPIMVSTGFGILQASRVRFSKTEYISCPGCGRTLFDLQSTTAKVRLQTG 551
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL G+ IA+MGCIVNG GEMADAD+GYVG PG I L+ + +V++ I A + L+QL
Sbjct: 552 HLKGLKIAVMGCIVNGIGEMADADYGYVGAGPGHISLFRNRELVRKNIPESAAVEELVQL 611
Query: 728 IKDHGRWAEP 737
IK++G W +P
Sbjct: 612 IKNNGDWHDP 621
>gi|288928856|ref|ZP_06422702.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 317 str. F0108]
gi|288329840|gb|EFC68425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 317 str. F0108]
Length = 650
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/654 (40%), Positives = 374/654 (57%), Gaps = 52/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR VG+V +G +P+RVQ+MTT DT D + + RI G +LVR+T QGKRE
Sbjct: 33 RRNASVTTVGSVTMGGNNPVRVQSMTTTDTNDTEASAAQAERIIQAGGELVRLTTQGKRE 92
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L QK Y+ PLVAD+HF +VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 93 AENLRNINAALRQKGYDTPLVADVHFNANVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 152
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I+ F P + C++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 153 TDEEYAEEIKKIDARFVPFLNICRENNTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 212
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F N + S+KASN VVMVQ+ RLLV +M + +YPLHLGVTEAGEGEDGR+
Sbjct: 213 FLRICKREQFSNVVISIKASNTVVMVQSVRLLVQQMRLEDMNYPLHLGVTEAGEGEDGRI 272
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE EI R L +
Sbjct: 273 KSAVGIGTLLSDGIGDTIRVSLSEDPEAEIPVARALVDY--------------------- 311
Query: 385 FDFQRRSGQLPIQKEGEE-VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
+ RS LPI + + +Y R + + ++ + L ++ + K V +
Sbjct: 312 --IEARSDHLPIPAQAAKGFNYTAPERRPTTPVANIGGENLP---VVISNRTDKDKVHVV 366
Query: 444 FKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLS-EQLTKPLPH-AMVLVN 500
T D I + R LP+ R + + + P + EQ+ PH A+ ++
Sbjct: 367 ANADQTPDYIYIGRHLPANLSAKRRYIMDYDAYMQVASTNPQAYEQVYPIFPHNAVPFIS 426
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
L E + +V G S E L LK +++ + +++K+G R
Sbjct: 427 LVEAD----------VKFLVLQYGANSDEYLACLKHHPEVVVVC-MSTHKNKVGD---QR 472
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL----EAP 615
L L +N PV+ + + ++ + A ++G L++DGL DG+ L + P
Sbjct: 473 ALVHELWSAGINNPVVFAQMYRHAAEEKETFQLKAAADMGPLMIDGLTDGIWLMNDGDLP 532
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+D D T+F +LQ R+R TKTEY+SCP CGRTL+DL+ A IRE T H+ G+ I
Sbjct: 533 DEDVDA---TAFGILQAARLRTTKTEYISCPGCGRTLYDLRTTIARIREATKHMKGLKIG 589
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
IMGCIVNGPGEMADADFGYVG PGK+ LY K V++ I + A + L++LI+
Sbjct: 590 IMGCIVNGPGEMADADFGYVGAGPGKVSLYRKKECVEKNIDEKDAVEHLLRLIE 643
>gi|260910730|ref|ZP_05917388.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635146|gb|EEX53178.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 659
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/657 (40%), Positives = 374/657 (56%), Gaps = 56/657 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR VG+V +G +P+RVQ+MTT DT D + + RI G +LVR+T QGKRE
Sbjct: 34 RRNASVTTVGSVTMGGNNPVRVQSMTTTDTNDTEASAAQAERIIQAGGELVRLTTQGKRE 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L QK Y PLVAD+HF +VA A +K+R+NPGN+ D F+QLEY
Sbjct: 94 AENLRNINAALRQKGYATPLVADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKQLEY 153
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I+ F P + C++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 154 TDEEYAEEIKKIDTRFVPFLNICRENNTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 213
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F+N + S+KASN VVMVQ+ RLLV +M + +YPLHLGVTEAGEGEDGR+
Sbjct: 214 FLRICKREHFNNVVISIKASNTVVMVQSVRLLVQQMRLEDMNYPLHLGVTEAGEGEDGRI 273
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G R L P +
Sbjct: 274 KSAVGIGALLADGIGDTIRVSLSEDPEAEIPVARALVDYIGARTPHL-----PIPAAMAN 328
Query: 384 YFDF---QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVV 440
F++ +RR + + G E + +R + V + + P+ +Y
Sbjct: 329 DFNYTAPERRPTKA-VANIGGENPPVVISNRTDKDKVHVVANADQTPDYIY--------- 378
Query: 441 GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL-PH-AMVL 498
+ R LP+ R + + + P + +L P+ PH A+
Sbjct: 379 -------------IGRHLPANLSAKRRYIMDYDAYMQLASTNPQAYELVYPIFPHNAVPF 425
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA 558
++L E + +V G S E L LK +++ + +++K+G
Sbjct: 426 ISLVEAD----------VKFLVLQYGANSDEYLACLKHHPEVVVVC-MSTHKNKVGD--- 471
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL----E 613
R L L +N PV+ + + ++ + A ++G L++DGL DG L +
Sbjct: 472 QRALVHELWSAGVNNPVVFAQMYRHSAEEKETFQLKAAADMGPLMIDGLTDGFWLMNDGD 531
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
P ++ D T+F +LQ R+R TKTEY+SCP CGRTL+DL+ A IRE T H+ G+
Sbjct: 532 LPDEEVDA---TAFGILQAARLRTTKTEYISCPGCGRTLYDLRTTIARIREATKHMKGLK 588
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADADFGYVG PGK+ LY K V++ I + A + L++LI++
Sbjct: 589 IGIMGCIVNGPGEMADADFGYVGAGPGKVSLYRKKECVEKNIDEKDAVEHLLRLIEN 645
>gi|377648358|gb|AFB70983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, partial
[Mitragyna speciosa]
Length = 237
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/237 (92%), Positives = 234/237 (98%)
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT++EYQ+EL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 1 CFDKIRVNPGNFADRRAQFEQLEYTEEEYQEELEHIEQVFTPLVEKCKKYGRAMRIGTNH 60
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV+AYRLLVAEM
Sbjct: 61 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVEAYRLLVAEM 120
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 121 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 180
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
ANLG RAAE+QQGV PFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 181 ANLGTRAAEIQQGVEPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLM 237
>gi|365121471|ref|ZP_09338391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
sp. 6_1_58FAA_CT1]
gi|363645716|gb|EHL84976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
sp. 6_1_58FAA_CT1]
Length = 616
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 264/665 (39%), Positives = 378/665 (56%), Gaps = 70/665 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +GN +G E+P+R+Q+MT T++ VE+ +RI D GAD VR+T QG +E
Sbjct: 8 RRKSSVTRIGNTPLGGENPVRIQSMTNTRTQETLPCVEQSIRIIDAGADYVRLTAQGTKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I+ L ++ Y+ PL+ADIHF P+VA A +K+R+NPGNF D F LEY
Sbjct: 68 AENLANIEKELHKRGYHTPLIADIHFNPNVADAAARIVEKVRINPGNFVDSARTFVHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ + F ++ CK++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAEEIKKLRARFIQFLDICKEHHTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C++ +F++ + S+KASN +M+++ RLL+A+M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRVCKEENFNDVVLSIKASNTGIMIKSVRLLIAKMEQEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE EI R+L + ++G P + K +
Sbjct: 248 KSAVGIGTLLADGIGDTIRVSLSEAPEAEIPVARKLVDYITN----REGHTPIKGKTYPH 303
Query: 385 FDF---QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
FDF +RR ++ G V V ++ +L+ K++ ++G
Sbjct: 304 FDFLRMERRKSKIIGNIGGNNV----------PVTIANALE---------KNVDIIGIIG 344
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+ D + + + P+ R+VD + V P P+ L
Sbjct: 345 EQYPDYWYIGNNDPDKYPN--------TAARIVDADVYV----------PQPNVYPLFTT 386
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELE-----ILKDIDATMIL----HDLPFNEDK 552
+ S G + T+ ++ SY +L+ LK+ D + + H P E
Sbjct: 387 K--SAGLIPSIKAKTKFLLF-----SYPQLDETLWKTLKENDDIVAILTSGHKNPVGEQ- 438
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
R F L L+ PVI + +DL I AG + G LL DG GDG+ L
Sbjct: 439 -------RAFFHELLCRGLDTPVILQHNYTEN-DNEDLQIKAGADFGTLLSDGFGDGVWL 490
Query: 613 EAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG 671
+ G + + +LQ R R +KTEY+SCP CGRTLFDLQ+ A+++ TSHL G
Sbjct: 491 QNQGNISTEAEICCMYGILQAVRQRISKTEYISCPGCGRTLFDLQKTIAKVKAATSHLKG 550
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
+ I IMGCIVNGPGEMADAD+GYVG +I LY K +++ I EQA + LI+LIK +
Sbjct: 551 LKIGIMGCIVNGPGEMADADYGYVGAGRDRISLYKNKVCIEKNIPEEQAVEKLIELIKIN 610
Query: 732 GRWAE 736
G W +
Sbjct: 611 GDWKD 615
>gi|333376794|ref|ZP_08468530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
mossii DSM 22836]
gi|332886007|gb|EGK06251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
mossii DSM 22836]
Length = 615
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 270/659 (40%), Positives = 371/659 (56%), Gaps = 59/659 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +GN +G +PIRVQ+MT +T D + E+V+RI + GAD VR+T QG RE
Sbjct: 8 RRLSSETRIGNTPLGGNNPIRVQSMTNTNTNDTEASAEQVIRIVEAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD IK + + YN PL+ADIHF P A A+ +K+R+NPGNF DR FE EY
Sbjct: 68 ADNLKNIKEVVRGRGYNTPLIADIHFNPRAAEAAAKVVEKVRINPGNFVDRVKTFETFEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+ I PL++ CK++ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIDKIRAKLVPLLDICKEHKTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F IC + F + SMK SN VVM +A RLL+A M G ++PLHLGVTEAG+GEDGR+
Sbjct: 188 FLHICLEERFKDIAISMKTSNTVVMSKAVRLLIARMEKEGLNFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG+LL DG+GDTIRVSL+E PE E+ R+L + + VA +K
Sbjct: 248 KSAVGIGSLLSDGIGDTIRVSLSEDPEYEVPVARKLIAYIKQKENHPEIVATASDKFSP- 306
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
F RR + G+ V V+ D S + L+ P+ LY + +L + P
Sbjct: 307 FSTDRRETYVVRNIGGDSVP---VVISDRS-QGNFELNSHFLPDYLY--VGKELPIAAP- 359
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
R +PS+ D + E+ T PL + E
Sbjct: 360 -----------RAIPSIIDFEGWKG----------------EKNTYPLFDKSNWNKISET 392
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELE-----ILKDIDATMILHDLPFNEDKIGRVQAA 559
+ A K L RL SY EL+ +LK+ + +++ + D I V
Sbjct: 393 DS-AIKFL----RL--------SYPELDKDILALLKNDKSIVVI----LSTDHINGVGEQ 435
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-D 618
R L N+ + PV+ + ++ +D+ I A + G L +DG G+G++L+ G
Sbjct: 436 RAFIHALMNNDCDTPVVLNRRYTEN-ESEDIQIKAAADFGTLYLDGFGNGIMLQNEGAIP 494
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMG 678
+ F +LQ R+R +KTEY+SCPSCGRTLFDLQ A ++ TSHL + I +MG
Sbjct: 495 LKNIDAYMFGILQASRVRTSKTEYISCPSCGRTLFDLQTTVALVKGATSHLKHLKIGVMG 554
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
CIVNGPGEMADAD+GYVG GKI LY K ++++ I+ +A + L+QLIK++G W EP
Sbjct: 555 CIVNGPGEMADADYGYVGAEKGKISLYKKKNLIEKNISSAEAVERLVQLIKENGDWVEP 613
>gi|393782921|ref|ZP_10371101.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salyersiae CL02T12C01]
gi|392671279|gb|EIY64753.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salyersiae CL02T12C01]
Length = 615
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 275/656 (41%), Positives = 370/656 (56%), Gaps = 55/656 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G HPIR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 10 RRETSEVNIGAVPLGGPHPIRIQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 70 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 130 TDEEYAQELQKIRDRFVPFLNICKENRTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + FH+ + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 190 FLRICVEEQFHDVVISIKASNTVVMVKTVRLLVTVMEKEGMAFPLHLGVTEAGDGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + +H H
Sbjct: 250 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVDY-------------ITARHEHP 296
Query: 385 FDFQRRSGQLP-IQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
+ +P I+ G +Y R + + ++ D L P +L + V
Sbjct: 297 Y--------IPGIEATG--FNYVSPSRRKTNAIRNIGGDHL--PVVLADRMDGNTEVNPQ 344
Query: 444 FKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVNL 501
F T D I RELP+ + + L D+ G E T P HA + +
Sbjct: 345 F----TPDYIYAGRELPAEREANVEYILD--ADVWEG------ETGTWPAFNHAQLPLIG 392
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
S + +P + DE L+I ++ ++ + +++G +A
Sbjct: 393 MCQSELKFLFMP------YMAQTDEVIACLKIHPEV----VIISQSNHPNRVGEHRA--- 439
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L L L PVI + + +DL I A ++GAL+ DGL DG+ L G
Sbjct: 440 LIHQLMSEGLKNPVIFFQHYQEEV-AEDLQIKAAADMGALIFDGLCDGIFLFNQGSLSHA 498
Query: 622 LRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCI 680
+ D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A I+E TSHL G+ I IMGCI
Sbjct: 499 VIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQHTIARIKEATSHLKGLKIGIMGCI 558
Query: 681 VNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
VNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK + + E
Sbjct: 559 VNGPGEMADADYGYVGAGRGKVSLYKRKECIEKNIPEEEAVEKLIELIKRNNDYTE 614
>gi|393789810|ref|ZP_10377929.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
nordii CL02T12C05]
gi|392650213|gb|EIY43884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
nordii CL02T12C05]
Length = 614
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 274/656 (41%), Positives = 366/656 (55%), Gaps = 55/656 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGANPIRIQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFKDVVISIKASNTVVMVKTVRLLVALMEKEGMTFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD---------------------- 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ R+ E E +Y R+ + + ++ + L P +L + K V F
Sbjct: 286 YILTRQDHPYIPGIETPEFNYLSPTRRETNAIRNIGGNHL--PVVLADRMDGKTEVNPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
T D I RELP++ + + L D+ G E+ T P A L
Sbjct: 344 ----TPDYIYAGRELPAIREANVEYILD--ADVWTG------EEGTWP---AFNYSQLPL 388
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ +L + + ++ E + LK +I+ + R+ R L
Sbjct: 389 MGMCQAEL-----KFLFMPYMAQTDEVIACLKTHPEVVIIS----QSNHPNRIGEHRALV 439
Query: 564 EYLSENNLNFPVI--HHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L L PVI H Q + +DL I A ++GAL+ DGL DG+ L G
Sbjct: 440 HQLMSEGLKNPVIFFQHYQEEDA---EDLQIKAAADMGALIFDGLCDGIFLFNQGLLPHA 496
Query: 622 LRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCI 680
+ D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A I+E TSHL G+ I IMGCI
Sbjct: 497 IVDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARIKEATSHLKGLKIGIMGCI 556
Query: 681 VNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
VNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK +G + E
Sbjct: 557 VNGPGEMADADYGYVGAGRGKVSLYKQKECIEKNIPEEEAVEKLIELIKANGDYTE 612
>gi|332881451|ref|ZP_08449100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357045527|ref|ZP_09107162.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella clara YIT 11840]
gi|332680449|gb|EGJ53397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355531389|gb|EHH00787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella clara YIT 11840]
Length = 624
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/657 (41%), Positives = 366/657 (55%), Gaps = 56/657 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G HPIRVQ+MT T D V + +RIA+ G D VR+T QG RE
Sbjct: 8 RRETGEVQIGGTPLGGNHPIRVQSMTNTSTMDTEACVAQTLRIAEAGGDYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + +PLVAD+HF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLRNINAGVRAAGCAVPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE F P + C++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAQELKKIEERFVPFLRICRENHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K DF + + S+KASN VVMV++ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEDFKDVVVSIKASNTVVMVRSVRLLVDAMEREGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI R+L + +
Sbjct: 248 KSAVGIGALLADGIGDTVRVSLSEAPEAEIPVARKLVDYVL------------------- 288
Query: 385 FDFQRRSGQLPI-QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK-LVVGM 442
RR G + I E E+ DY + R + ++ D + LAA + G
Sbjct: 289 ----RRDGAMMIPAAEAEDFDYLNPVRRKTRAVRNIGGDHVPVVIADRMDLAASGRLKGF 344
Query: 443 PFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVN 500
D I R LP V++ + + D+ G E T P P+ M+
Sbjct: 345 KAHPDFRPDYIYCGRNLPPVEEREGDYIVD--ADVWTG------ESGTYPAFPYNMLPFM 396
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
Q + + L G EE+ +++ +++++G R
Sbjct: 397 SQCTADLKFLFLSYGA----------LNEEVRACLKYHPEVVVISQSNHQNRLGE---HR 443
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPG--- 616
L L+ L PV+ Q+ +G ++D I + ++GALL DGL DGL L G
Sbjct: 444 ALVHELTREGLQNPVVIFQQYAHGQEEKEDFQIESAADMGALLFDGLCDGLYLYNNGTLE 503
Query: 617 -QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+D D T+F +LQ R+R TKTEY+SCP CGRTL+DLQ+ A I+ T HL G+ I
Sbjct: 504 HRDIDA---TAFGILQAARLRTTKTEYISCPGCGRTLYDLQDTIARIKAATGHLKGLKIG 560
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IMGCIVNGPGEMADAD+GYVG A GK+ LY K V+R I E+A + L++LI+++G
Sbjct: 561 IMGCIVNGPGEMADADYGYVGAARGKVSLYKKKECVERNIPAEEAVEKLLRLIRENG 617
>gi|330996565|ref|ZP_08320447.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella xylaniphila YIT 11841]
gi|329573121|gb|EGG54740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella xylaniphila YIT 11841]
Length = 624
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 269/654 (41%), Positives = 365/654 (55%), Gaps = 50/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G HPIRVQ+MT T D V + +RIA+ G D VR+T QG RE
Sbjct: 8 RRETGEVQIGGTPLGGNHPIRVQSMTNTSTMDTEACVAQTLRIAEAGGDYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + +PLVAD+HF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLRNINAGVRAAGCAVPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE F P + C++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAQELKKIEERFVPFLRICRENHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K F + + S+KASN VVMV++ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEGFKDVVVSIKASNTVVMVRSVRLLVDAMEREGMCFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI R+L + +
Sbjct: 248 KSAVGIGALLADGIGDTVRVSLSEAPEAEIPVARKLVDYVL------------------- 288
Query: 385 FDFQRRSGQLPI-QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK-LVVGM 442
RR G + I E E+ DY + R + ++ D + LAA + G
Sbjct: 289 ----RRDGAMMIPAAEAEDFDYLNPVRRKTRAVRNIGGDHVPVVVADRMDLAASGRLKGF 344
Query: 443 PFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVN 500
D I R LP V++ + + D+ G E T P P+ M+
Sbjct: 345 KAHPDFRPDYIYCGRNLPPVEEREGDYIVD--ADVWTG------EPGTYPAFPYNMLPFM 396
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
Q + + L G EE+ +++ +++++G R
Sbjct: 397 SQCTADLKFLFLSYGA----------LNEEVRACLKYHPEVVVISQSNHQNRLGE---HR 443
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-D 618
L L+ L PV+ Q+ +G+ ++D I + ++GALL DGL DGL L G D
Sbjct: 444 ALVHELTREGLQNPVVIFQQYAHGLEEKEDFQIESAADMGALLFDGLCDGLYLYNNGTLD 503
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMG 678
+ T+F +LQ R+R TKTEY+SCP CGRTL+DLQ+ A I+ T HL G+ I IMG
Sbjct: 504 HRDIDATAFGILQAARLRTTKTEYISCPGCGRTLYDLQDTIARIKAATGHLKGLKIGIMG 563
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
CIVNGPGEMADAD+GYVG A GK+ LY K V+R I E+A + L++LI+++G
Sbjct: 564 CIVNGPGEMADADYGYVGAARGKVSLYKKKECVERNIPAEEAVEKLLRLIRENG 617
>gi|255012949|ref|ZP_05285075.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_7]
gi|262382932|ref|ZP_06076069.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_33B]
gi|298374155|ref|ZP_06984113.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_19]
gi|410102119|ref|ZP_11297046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D25]
gi|262295810|gb|EEY83741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_33B]
gi|298268523|gb|EFI10178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_19]
gi|409238841|gb|EKN31629.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D25]
Length = 611
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 266/650 (40%), Positives = 357/650 (54%), Gaps = 48/650 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIERIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L + +R E + P E
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHR---PIEASMAPG 303
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
FD S ++ EG + V+ D S D L P+ +Y + + +P
Sbjct: 304 FDTVATSRRISRVVEGIGGTFSPVVISDRSS-GDFEFDYLSLPDYIY--IGKEDPDNLPD 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
VD+ +E P+ + + E P + + +L
Sbjct: 361 NFRLLVDAHFWKERPNA--------------FPCFIASEAEELKDYDCPLKFIRLTYMDL 406
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
+ LEILK D T+++ + + +G +AA
Sbjct: 407 TD----------------------RMLEILK-ADKTVVVLLSTHHRNGVGSQRAA---MH 440
Query: 565 YLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRD 624
L + PV+ H F + L + + + G LL+DG GDGL+L G +
Sbjct: 441 KLLMAGCDVPVVLHRDFRE-TDVELLQLKSAADFGTLLLDGFGDGLMLHNEGCEAVVSDR 499
Query: 625 TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGP 684
F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIVNGP
Sbjct: 500 CMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGP 559
Query: 685 GEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
GEMADAD+GYVG G+I LY GK V + I E A + L+QLIK++G W
Sbjct: 560 GEMADADYGYVGAGRGQISLYKGKECVLKNIPEEDAVERLVQLIKENGDW 609
>gi|315606925|ref|ZP_07881931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae ATCC 33574]
gi|315251306|gb|EFU31289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae ATCC 33574]
Length = 628
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 272/663 (41%), Positives = 379/663 (57%), Gaps = 63/663 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQAERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL K Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRAKGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE E+ R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEVPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKCAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADAKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
L + P + D +T+F +LQ R+R +KTEY+SCP CGRTL+DL+E A+IRE T
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIAKIREATK 562
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
+ G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY + ++R I E A + L+ L
Sbjct: 563 GMKGLKIGIMGCIVNGPGEMADADYGYVGAGPNRVSLYRKQVCIERNIPQEVAVEHLLAL 622
Query: 728 IKD 730
IK+
Sbjct: 623 IKN 625
>gi|150009758|ref|YP_001304501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis ATCC 8503]
gi|256838562|ref|ZP_05544072.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D13]
gi|423333795|ref|ZP_17311576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL03T12C09]
gi|166217119|sp|A6LGR5.1|ISPG_PARD8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|149938182|gb|ABR44879.1| putative GcpE terpenoid biosynthesis protein [Parabacteroides
distasonis ATCC 8503]
gi|256739481|gb|EEU52805.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D13]
gi|409227105|gb|EKN20007.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL03T12C09]
Length = 611
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 266/650 (40%), Positives = 357/650 (54%), Gaps = 48/650 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L + +R E + P E
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHR---PIEASMAPG 303
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
FD S ++ EG + V+ D S D L P+ +Y + + +P
Sbjct: 304 FDTVATSRRISRVVEGIGGTFSPVVISDRSS-GDFEFDYLSLPDYIY--IGKEDPDNLPD 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
VD+ +E P+ + + E P + + +L
Sbjct: 361 NFRLLVDAHFWKERPNA--------------FPCFIASEAEELKDYDCPLKFIRLTYMDL 406
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
+ LEILK D T+++ + + +G +AA
Sbjct: 407 TD----------------------RMLEILK-ADKTVVVLLSTHHRNGVGSQRAA---MH 440
Query: 565 YLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRD 624
L + PV+ H F + L + + + G LL+DG GDGL+L G +
Sbjct: 441 KLLMAGCDVPVVLHRDFRE-TDVELLQLKSAADFGTLLLDGFGDGLMLHNEGCEAVVSDR 499
Query: 625 TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGP 684
F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIVNGP
Sbjct: 500 CMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGP 559
Query: 685 GEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
GEMADAD+GYVG G+I LY GK V + I E A + L+QLIK++G W
Sbjct: 560 GEMADADYGYVGAGRGQISLYKGKECVLKNIPEEDAVERLVQLIKENGDW 609
>gi|198277457|ref|ZP_03209988.1| hypothetical protein BACPLE_03679 [Bacteroides plebeius DSM 17135]
gi|198269955|gb|EDY94225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
plebeius DSM 17135]
Length = 613
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 269/656 (41%), Positives = 366/656 (55%), Gaps = 58/656 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIR+Q+MT T D VE+ RI + G + VR+T QG RE
Sbjct: 8 RRQANEVYVGATPMGGAYPIRIQSMTNTVTMDTEACVEQAKRIIEAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL + Y PLVAD+HF P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLQHINASLRAQGYQTPLVADVHFNPKVAEVAALYAEKVRINPGNYVDAARTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KE+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAKEIQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F N + S+KASN V+MV+ RLLV +M +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEQNFMNVVISIKASNTVIMVRTVRLLVEQMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + ++ E H +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVDYVLK-----------REGHPY- 295
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+P E E +Y R+ + ++ DQL P ++ L L V F
Sbjct: 296 ---------IP-ATEAPEFNYTHPSRRETVAVGNIGGDQL--PVVISARLNNDLEVSEQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K D + + LP + R + +VD + T P + L+ L
Sbjct: 344 KP----DYLYCGQRLPE----NCRTDIGYIVD----ACAWDGSEHTYPAFNYQQLIELHH 391
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD---LPFNEDKIGRVQAAR 560
P + + + SY L + +++ A + LH + + R+ R
Sbjct: 392 --------HPAKMKFLFT-----SY--LGLNEEVMACLRLHPEVVIVAQSNHYNRLGEFR 436
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
L L L P++ Q +DL I + ++GAL++DGL DG+LL G
Sbjct: 437 ALAHQLMNQGLKNPLV-FFQLYQETETEDLQIKSAADMGALIIDGLCDGILLYNHGNQIS 495
Query: 621 FLR--DTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMG 678
L+ +T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T+HL G+ I IMG
Sbjct: 496 NLKVDETAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKAATAHLKGLKIGIMG 555
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
CIVNGPGEMADAD+GYVG GKI LY K +++ I EQA + LI+LIK +G +
Sbjct: 556 CIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEQAVEKLIELIKANGDY 611
>gi|288925925|ref|ZP_06419855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae D17]
gi|288337349|gb|EFC75705.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae D17]
Length = 628
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 271/663 (40%), Positives = 377/663 (56%), Gaps = 63/663 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQAERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRANGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKGAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADAKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
L + P + D +T+F +LQ R+R +KTEY+SCP CGRTL+DL+E A+IRE T
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIAKIREATK 562
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
+ G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY + ++R I E A + L+ L
Sbjct: 563 GMKGLKIGIMGCIVNGPGEMADADYGYVGAGPNRVSLYRKQVCIERNIPQEVAVEHLLAL 622
Query: 728 IKD 730
I +
Sbjct: 623 INN 625
>gi|53715645|ref|YP_101637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis YCH46]
gi|73621078|sp|Q64N34.1|ISPG_BACFR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|52218510|dbj|BAD51103.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides fragilis YCH46]
Length = 626
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/654 (41%), Positives = 363/654 (55%), Gaps = 51/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P K Y
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEI---------------------PVARKLVDY 286
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+R +P E + +Y + R + ++ D L P +L + ++ F
Sbjct: 287 ITSRRNHPYIP-GMEAPDFNYLSPVRRKTRPVRNIGGDHL--PVVLADRMDGRMETHPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
T D I R LP + + L D+ G E T P A L+
Sbjct: 344 ----TPDYIYAGRALPEQTEPGVQYILD--ADVWKG------EPDTWP---AFNYAQLEL 388
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ T A +L + + + + E + LK +++ + RV R L
Sbjct: 389 METCAAEL-----KFLFTPYMALTREVVACLKQHPEAVVVS----QSNHPNRVGEHRALA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLR 623
L+ L PVI + +DL + AG ++GAL+ DGL DG+ L G+ +
Sbjct: 440 HQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFNQGKLSHAVI 498
Query: 624 D-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVN 682
D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVN
Sbjct: 499 DATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVN 558
Query: 683 GPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
GPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 559 GPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
>gi|402308894|ref|ZP_10827896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. MSX73]
gi|400374473|gb|EJP27391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. MSX73]
Length = 628
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/663 (41%), Positives = 378/663 (57%), Gaps = 63/663 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQSERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL K Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRAKGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKCAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADVKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
L + P + D +T+F +LQ R+R +KTEY+SCP CGRTL+DL+E A+IRE T
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIAKIREATK 562
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
+ G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY + ++R I E A + L+ L
Sbjct: 563 GMKGLKIGIMGCIVNGPGEMADADYGYVGAGPNRVSLYRKQVCIERNIPQEVAVEHLLAL 622
Query: 728 IKD 730
I +
Sbjct: 623 INN 625
>gi|336411562|ref|ZP_08592026.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_56FAA]
gi|423259929|ref|ZP_17240852.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T00C01]
gi|423267584|ref|ZP_17246565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T12C05]
gi|335941358|gb|EGN03215.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_56FAA]
gi|387775574|gb|EIK37680.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T00C01]
gi|392696427|gb|EIY89621.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T12C05]
Length = 626
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/654 (41%), Positives = 363/654 (55%), Gaps = 51/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P K Y
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEI---------------------PVARKLVDY 286
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+R +P E + +Y + R + ++ D L P +L + ++ F
Sbjct: 287 ITSRRNHPYIP-GMEAPDFNYLSPVRRKTRPVRNIGGDHL--PVVLADRMDGRMETHPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
T D I R LP + + L D+ G E T P A L+
Sbjct: 344 ----TPDYIYAGRALPEQTEPGVQYILD--ADVWKG------EPDTWP---AFNYAQLEL 388
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ T A +L + + + + E + LK +++ + RV R L
Sbjct: 389 METCAAEL-----KFLFTPYMALTREVVACLKQHPEAVVVS----QSNHPNRVGEHRALA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLR 623
L+ L PVI + +DL + AG ++GAL+ DGL DG+ L G+ +
Sbjct: 440 HQLAVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFNQGKLSHAVI 498
Query: 624 D-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVN 682
D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVN
Sbjct: 499 DATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVN 558
Query: 683 GPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
GPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 559 GPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
>gi|423342558|ref|ZP_17320272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides johnsonii CL02T12C29]
gi|409217475|gb|EKN10451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides johnsonii CL02T12C29]
Length = 612
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/653 (40%), Positives = 358/653 (54%), Gaps = 54/653 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVHQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 69 ARNLGAIRKQLDEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ DF + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICREEDFPDVVISIKASNTVVMVKTVRLLVRTMESEDMHYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + ++G P E
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILE----REGHEPLEATPAPG 304
Query: 385 FD---FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
+D +RR ++ EG ++ V+ D S D P+ +Y + +
Sbjct: 305 YDPVTVERRHSRV---TEGIGGNFPPVVISDRSN-GDFEFDHASQPDYIY--IGKEDPDN 358
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+P VD+ +E P+ ++ L D S +P + +
Sbjct: 359 LPDNFRLLVDAHFWKERPNAYPFFIASEIEELKDYS--------------VPLKFIRLTY 404
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
++L+ ++L + T ++V L + A R
Sbjct: 405 RDLTDRVIEVLKKDTSVIVVLSTHHR--------------------------NGIAAERA 438
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L + PVI H + + L + + + G LL+DG GDG++L G +
Sbjct: 439 AMHRLLIAGCDVPVILHRDYRE-TDTEALQLKSAADFGTLLLDGFGDGIMLHNEGCEAMA 497
Query: 622 LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIV 681
F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIV
Sbjct: 498 TDSCMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIAHIKEATSHLKGLKIGIMGCIV 557
Query: 682 NGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
NGPGEMADAD+GYVG +I LY GK V + I E+A + L+QLIK++G W
Sbjct: 558 NGPGEMADADYGYVGAGKNRISLYKGKECVLKNIPEEEAVERLVQLIKENGDW 610
>gi|218258484|ref|ZP_03474851.1| hypothetical protein PRABACTJOHN_00506 [Parabacteroides johnsonii
DSM 18315]
gi|218225456|gb|EEC98106.1| hypothetical protein PRABACTJOHN_00506 [Parabacteroides johnsonii
DSM 18315]
Length = 612
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/653 (40%), Positives = 358/653 (54%), Gaps = 54/653 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVHQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 69 ARNLGAIRKQLDEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ DF + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICREEDFPDVVISIKASNTVVMVKTVRLLVRTMESEDMHYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + ++G P E
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILE----REGHEPLEATPAPG 304
Query: 385 FD---FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
+D RR ++ EG ++ V+ D S D P+ +Y + +
Sbjct: 305 YDPVTVGRRHSRV---TEGIGGNFPPVVISDRSN-GDFEFDHASQPDYIY--IGKEDPDN 358
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+P VD+ +E P+ ++ L D S +P + +
Sbjct: 359 LPDNFRLLVDAHFWKERPNAYPFFIASEIEELKDYS--------------VPLKFIRLTY 404
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
++L+ ++L + T ++V L + A R
Sbjct: 405 RDLTDRVIEVLKKDTSVIVVLSTHHR--------------------------NGIAAERA 438
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L + PVI H + + L + + + G LL+DG GDG++L G +
Sbjct: 439 AMHRLLIAGCDVPVILHRDYRE-TDTEALQLKSAADFGTLLLDGFGDGIMLHNEGCEAMV 497
Query: 622 LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIV 681
F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIV
Sbjct: 498 TDSCMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIAHIKEATSHLKGLKIGIMGCIV 557
Query: 682 NGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
NGPGEMADAD+GYVG +I LY GK V + I+ E+A + L+QLIK++G W
Sbjct: 558 NGPGEMADADYGYVGAGKNRISLYKGKECVLKNISEEEAVERLVQLIKENGDW 610
>gi|60683585|ref|YP_213729.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis NCTC 9343]
gi|73621077|sp|Q5L7W2.1|ISPG_BACFN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|60495019|emb|CAH09837.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
NCTC 9343]
Length = 626
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 273/654 (41%), Positives = 362/654 (55%), Gaps = 51/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P K Y
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEI---------------------PVARKLVDY 286
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+R +P E + +Y + R + ++ D L P +L + ++ F
Sbjct: 287 ITSRRNHPYIP-GMEAPDFNYLSPVRRKTRPVRNIGGDHL--PVVLADRMDGRMETHPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
T D I R LP + + L D+ G E T P A L+
Sbjct: 344 ----TPDYIYAGRALPEQTEPGVQYILD--ADVWKG------EPDTWP---AFNYAQLEL 388
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ T A +L + + + + E + LK +++ + RV R L
Sbjct: 389 METCAAEL-----KFLFTPYMALTREVVACLKQHPEAVVVS----QSNHPNRVGEHRALA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLR 623
L+ L PVI + +DL I AG ++GAL+ DGL DG+ L G+ +
Sbjct: 440 HQLTVEGLQNPVIFFQHYAEDT-AEDLQIKAGADMGALIFDGLCDGIYLFNQGKLSHAVI 498
Query: 624 D-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVN 682
D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVN
Sbjct: 499 DATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVN 558
Query: 683 GPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
GPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 559 GPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
>gi|423272037|ref|ZP_17251006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T00C42]
gi|423275961|ref|ZP_17254904.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T12C13]
gi|392695724|gb|EIY88930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T00C42]
gi|392700114|gb|EIY93281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T12C13]
Length = 626
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 272/654 (41%), Positives = 362/654 (55%), Gaps = 51/654 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P K Y
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEI---------------------PVARKLVDY 286
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+R +P E + +Y + R + ++ D L P +L + ++ F
Sbjct: 287 ITSRRNHPYIP-GMEAPDFNYLSPVRRKTRPVHNIGGDHL--PVVLADRMDGRMETHPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
T D I R LP + + L D+ G E T P A L+
Sbjct: 344 ----TPDYIYAGRALPEQTEPGVQYILD--ADVWKG------EPDTWP---AFNYAQLEL 388
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ T A +L + + + + E + LK +++ + RV R L
Sbjct: 389 METCAAEL-----KFLFTPYMALTREVVACLKQHPEAVVVS----QSNHPNRVGEHRALA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLR 623
L+ L PVI + +DL + AG ++GAL+ DGL DG+ L G+ +
Sbjct: 440 HQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFNQGKLSHAVI 498
Query: 624 D-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVN 682
D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVN
Sbjct: 499 DATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVN 558
Query: 683 GPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
GPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 559 GPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
>gi|423304743|ref|ZP_17282742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T00C23]
gi|423310143|ref|ZP_17288127.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T12C37]
gi|392682783|gb|EIY76125.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T12C37]
gi|392683407|gb|EIY76742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T00C23]
Length = 621
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 265/661 (40%), Positives = 371/661 (56%), Gaps = 57/661 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINIGLRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVQENFTDVVISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + ++H H
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVDY-------------IVQRHDHP 294
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ +P + E +Y R+ + + ++ D L +AA+L M F
Sbjct: 295 Y--------IP-GADVPEFNYLSPTRRETAAVHNIGGDNLPV------VIAARLDGDMDF 339
Query: 445 KDLATVDSI-----LLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
D I + ++LP ++ ++D + + SE A
Sbjct: 340 NPQFVPDYIYTGRSIPKQLPE--------GMQCIIDADVWMEQSNSETKPDNAWPAFKGD 391
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRG--DESYEELEILKDIDATMILHDLPFNEDKIGRVQ 557
L LS+ L L ++ G DE+ L+ ++ +L + +++G +
Sbjct: 392 QLPFLSSCGASL----KFLFITYMGLNDEAIACLKYHPEV----VLISQSNHPNRLGEQR 443
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
A L + + L PV+ + ++L I A ++GAL+ DGL DG+LL G+
Sbjct: 444 A---LVHQMMKKGLKNPVVFFEHYAES-ELENLQIKAAADMGALIFDGLCDGILLFNQGE 499
Query: 618 DFD--FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+ T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T HL G+ I
Sbjct: 500 TISGKVVDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKAATGHLKGLKIG 559
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LI+D+G +
Sbjct: 560 IMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIRDNGDYI 619
Query: 736 E 736
E
Sbjct: 620 E 620
>gi|423346455|ref|ZP_17324143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL03T12C32]
gi|409220273|gb|EKN13229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL03T12C32]
Length = 613
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 351/661 (53%), Gaps = 66/661 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVCQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ EY
Sbjct: 69 ARNLGVIRKQLSEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICRDENFPDVVISIKASNTVVMVKTVRLLVRTMEAEDMYYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR-------AAELQQGVAPF 377
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + A G P
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILEREGHEPVEASPAPGYDPV 308
Query: 378 EEKHRHYFDFQRRSGQLP--IQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLA 435
RH +R G P + + D+ D P+ +Y +
Sbjct: 309 TADRRHSRVTERIGGNFPPVVISDRSNGDF--------------EFDHASQPDYIY--IG 352
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ +P VD+ +E P+ + + + E +P
Sbjct: 353 KEDPENLPDNFRLLVDAHFWKERPNA--------------YPFFIASEIDELKDYSVPLK 398
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGR 555
+ + ++L+ ++L + ++V L + + I
Sbjct: 399 FIRLTYRDLTDRVIEVLKQDKSVIVILS-----------------------THHRNGIAA 435
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+AA +L + PVI H + + L + A + G LL+DG GDG++L
Sbjct: 436 ERAA---MHHLLAAGCDVPVILHRDYRE-TDIEALQLKAAVDFGTLLLDGFGDGIMLHNE 491
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
G + F +LQ R R +KTEY+SCPSCGRTL+DLQ A I++ TSHL G+ I
Sbjct: 492 GYETMVTDSCMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKKATSHLKGLKIG 551
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADAD+GYVG +I LY GK V + I E+A + L+QLIK+ G W
Sbjct: 552 IMGCIVNGPGEMADADYGYVGAGKNRISLYKGKECVLKNIPEEEAVERLVQLIKESGDWT 611
Query: 736 E 736
+
Sbjct: 612 D 612
>gi|154490022|ref|ZP_02030283.1| hypothetical protein PARMER_00251 [Parabacteroides merdae ATCC
43184]
gi|423723022|ref|ZP_17697175.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL09T00C40]
gi|154089464|gb|EDN88508.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae ATCC 43184]
gi|409241852|gb|EKN34619.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL09T00C40]
Length = 613
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 351/661 (53%), Gaps = 66/661 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVCQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ EY
Sbjct: 69 ARNLGVIRKQLSEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICRDENFPDVVISIKASNTVVMVKTVRLLVRTMEAEDMYYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR-------AAELQQGVAPF 377
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + A G P
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILEREGHEPVEASPAPGYDPV 308
Query: 378 EEKHRHYFDFQRRSGQLP--IQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLA 435
RH +R G P + + D+ D P+ +Y +
Sbjct: 309 TADRRHSRVAERIGGNFPPVVISDRSNGDF--------------EFDHASQPDYIY--IG 352
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ +P VD+ +E P+ + + + E +P
Sbjct: 353 KEDPENLPDNFRLLVDAHFWKERPNA--------------YPFFIASEIDELKDYSVPLK 398
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGR 555
+ + ++L+ ++L + ++V L + + I
Sbjct: 399 FIRLTYRDLTDRVIEVLKQDKSVIVILS-----------------------THHRNGIAA 435
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+AA +L + PVI H + + L + A + G LL+DG GDG++L
Sbjct: 436 ERAA---MHHLLAAGCDVPVILHRDYRE-TDIEALQLKAAVDFGTLLLDGFGDGIMLHNE 491
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
G + F +LQ R R +KTEY+SCPSCGRTL+DLQ A I++ TSHL G+ I
Sbjct: 492 GCETMVTDSCMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKKATSHLKGLKIG 551
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADAD+GYVG +I LY GK V + I E+A + L+QLIK+ G W
Sbjct: 552 IMGCIVNGPGEMADADYGYVGAGKNRISLYKGKECVLKNIPEEEAVERLVQLIKESGDWT 611
Query: 736 E 736
+
Sbjct: 612 D 612
>gi|325281521|ref|YP_004254063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
splanchnicus DSM 20712]
gi|324313330|gb|ADY33883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
splanchnicus DSM 20712]
Length = 612
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 367/661 (55%), Gaps = 67/661 (10%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKT V +GNV + SE P+ VQ+M T++V VE+ +RI + G LVRIT G +
Sbjct: 1 MRRKTTAVRIGNVVLSSEEPVLVQSMLNTSTREVDACVEQAIRIIEAGGRLVRITAPGVK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ EI L ++ Y P+ ADIHF A A +K+R+NPGNFAD+RA F++L
Sbjct: 61 EAEMLGEIHRRLRERGYTTPISADIHFVAEAASVAARYVEKVRINPGNFADKRATFKKLT 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY EL+ + + F+ +E C++YG AVRIGTNHGSLSDRIMS YGD+P GMVE+
Sbjct: 121 YTDEEYAAELEILRQKFTEFLEVCRQYGTAVRIGTNHGSLSDRIMSRYGDTPAGMVEATM 180
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ R+C+ DF + + S+K+S+ MV A RLLV +M G YPLHLGVTEAGEGEDGR
Sbjct: 181 EYLRVCQACDFKDVVISLKSSDCRTMVDAVRLLVEKMEAEGMCYPLHLGVTEAGEGEDGR 240
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
++SA+GIGTLL +G+GDTIRVSLTE PE EI LA + E +G P + +
Sbjct: 241 IRSAVGIGTLLNEGIGDTIRVSLTEEPEAEIPVACELARI-CSEPEYLKGWTPLKGECSK 299
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS----LDQL----KAPELLYKSLA 435
+G + ++ V++R G + V+ D+L KAPE +Y
Sbjct: 300 PCIVAGLTGVTVLDEQ--------VMNRIGFTVSEVNDPVYGDRLHAGIKAPEWIYTGTL 351
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ +P D + + + ++ V + +A +PL
Sbjct: 352 GPELTKLP-PDTGVIVPLEILDMAHVYNRNA---------------SPLC---------- 385
Query: 496 MVLVNLQELSTGAYK----LLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
S GAYK + RLV R +E +L + +D A ++L LP
Sbjct: 386 ---------SVGAYKKGEQTIDSKYRLVQICRSEELDADLTGRLRQDGKAVLVLA-LPVE 435
Query: 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+ R +F + E L P I P G ++ + + A + +G +D L G
Sbjct: 436 ------YRLYREIFRRIQEAGLTNPAIIRAVVP-GKEKERIRLVAASQLGGFFLDRLAGG 488
Query: 610 LLLEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
L +E P +D F + S N+LQ +R K E++SCP CGRTLFDLQ A+++ H
Sbjct: 489 LWIETPEIEDLTFPLELSRNILQSAGVRRYKAEFISCPGCGRTLFDLQGAVAKVKAAFGH 548
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
L + IA+MGC+VNGPGEM DAD+GYVG GK++LY G+ +V+ + E+A AL ++I
Sbjct: 549 LNTLKIAVMGCVVNGPGEMGDADYGYVGAGNGKVNLYKGRKMVRTAVPEEEAIGALREMI 608
Query: 729 K 729
+
Sbjct: 609 E 609
>gi|303236135|ref|ZP_07322737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
disiens FB035-09AN]
gi|302483717|gb|EFL46710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
disiens FB035-09AN]
Length = 632
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/659 (40%), Positives = 375/659 (56%), Gaps = 51/659 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG++ +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGSLDMGGDNPVRIQSMTTTNTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L ++ PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKYINAQLREEGIMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KELQ IE+ +P +E CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELQKIEKRLTPFIEICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K +F++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKQNFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + + L PF +
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEDPEDEIPVARYLTRYIRQKKGHLIVPADPF-----N 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
FD+ R P ++E V+ G G + V Q K + + +V +P
Sbjct: 304 GFDYLR-----PERRETVAVENIG-----GDNVPVVIASQNK------EDSGSTVVSALP 347
Query: 444 FKDLATVDSILLRELPS----VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
D V+ L +L + D+++ + L ++ I P+ PL
Sbjct: 348 KPDYIYVNDKLPEQLKDGQRYIIDYNSYIELASKGELPSENIYPIFPTPAIPL------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA- 558
+ T KL + +V G S E L LK +++ + +++K+ +A
Sbjct: 401 ----IGTVNSKL-----KFLVVRYGTPSEELLACLK-FHPEVVVICVSLHQNKLAEQRAL 450
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIH------RDDLVIGAGTNVGALLVDGLGDGLLL 612
A ++ +N L F ++ + + ++ + A ++GAL++DGL DGL L
Sbjct: 451 AHQMMIAGVKNPLIFAQMYQFSTDDKVKENEPTAKEQFQLSAAADMGALMMDGLTDGLWL 510
Query: 613 EAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG 671
G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T + G
Sbjct: 511 MNDGNLSQDDIEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKGMNG 570
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
+ I IMGCIVNGPGEMADAD+GYVG K+ LY K V++ I E A + L+ LIK+
Sbjct: 571 LKIGIMGCIVNGPGEMADADYGYVGAGLKKVSLYRKKVCVEKNIPEEDAVEHLLALIKN 629
>gi|189462027|ref|ZP_03010812.1| hypothetical protein BACCOP_02704 [Bacteroides coprocola DSM 17136]
gi|189431241|gb|EDV00226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprocola DSM 17136]
Length = 614
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 357/655 (54%), Gaps = 52/655 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIR+Q+MT T D VE+ RI + G + VR+T QG RE
Sbjct: 8 RREANEVYVGATPMGGTNPIRIQSMTNTVTMDTEACVEQAKRIIEAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PL+AD+HF P VA A + +R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLIADVHFNPKVAEVAALYAEGVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F N + S+KASN VVMV+ RLL +M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEQFMNVVISIKASNTVVMVKTVRLLAEQMEKEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD---------------------- 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ QR + E E +Y R + + ++ + + ++A+L M
Sbjct: 286 YVLQRENHPYIPGAEAAEFNYTNPNRRHTTAVENIGGEHVPV------VISARLDGNMQI 339
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ D I ++LP + R + +VD ++ E+ T P + LV L
Sbjct: 340 NEQFCPDYIYCGQQLPEM----RRTNIGYIVDANIW----KGEEGTYPAFNYQQLVELHH 391
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ L L EE + +++ + +++G R +
Sbjct: 392 CNAKVKFLFTPYMGL---------NEEATACLRMHPEVVIIAQSNHPNRLGEF---RGIA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDF--DF 621
L L P++ QF + +DL I + ++GAL+ DG DG+LL G +
Sbjct: 440 HQLMNQGLTNPLV-FFQFYQENNTEDLQIKSAVDMGALIFDGFCDGILLYNHGNAITDEK 498
Query: 622 LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIV 681
+ +T+F +LQ R R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+ I IMGCIV
Sbjct: 499 VDETAFGILQAGRARTSKTEYISCPGCGRTLYDLEATIARIKAATSHLKGLKIGIMGCIV 558
Query: 682 NGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
NGPGEMADAD+GYVG GKI LY K +++ I EQA + LI+LIK +G + E
Sbjct: 559 NGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEQAVEKLIELIKANGDYKE 613
>gi|340350226|ref|ZP_08673225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens ATCC 33563]
gi|339609138|gb|EGQ14014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens ATCC 33563]
Length = 640
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/666 (39%), Positives = 371/666 (55%), Gaps = 58/666 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT DT D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTDTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLRHINAQLRSEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDVVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA----RYIRQKKGHIIVPAETFKG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK--SLAAKLV 439
Y +RR + G+ V H D + + + +L AP+ +Y +L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATH-DAAEHNADIVSKLPAPDYIYTKDTLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 DGQRY----------------IIDYNAYIELAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAA 559
+ T K+ + +V G S E L LK +++ + +++K+
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVIVCVSSHQNKLAE---Q 447
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDD-----------LVIGAGTNVGALLVDGLGD 608
R L + + PV+ + + +D+ + A ++GAL++DGL D
Sbjct: 448 RALVHQMMIAGVENPVVFAQMYQFSVDKDNNNTNEPTAKEQFQLSAAADMGALMIDGLTD 507
Query: 609 GLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
GL L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 508 GLWLMNNGNIPQDDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATK 567
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
+ G+ I IMGCIVNGPGEMADAD+GYVG K+ LY K ++R I E A + L+ L
Sbjct: 568 GMTGLKIGIMGCIVNGPGEMADADYGYVGAGMKKVSLYRKKVCIERNIPEEDAVEHLLAL 627
Query: 728 IKDHGR 733
I++ R
Sbjct: 628 IENDQR 633
>gi|281421662|ref|ZP_06252661.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
copri DSM 18205]
gi|281404296|gb|EFB34976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
copri DSM 18205]
Length = 635
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/658 (38%), Positives = 369/658 (56%), Gaps = 63/658 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +G + +G ++PIR+Q+MTT +T D V++ I G +LVR T QG RE
Sbjct: 22 RRASSVAHIGAIDLGGDNPIRIQSMTTTNTNDTEACVQQAEEIIKAGGELVRFTTQGSRE 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + Y PLVAD+HF P+VA A +K+RVNPGN+ D +F + EY
Sbjct: 82 AENMKNINAGIRADGYQTPLVADVHFNPNVADVAALYCEKVRVNPGNYVDPARKFIKQEY 141
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 142 TDEEYAHELQKIEDRFVPFLNICKEHHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCLE 201
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K FH+ + S+K+SN VVMV++ RLLV EM G +YPLHLGVTEAGEGEDGR+
Sbjct: 202 FLRICKKEKFHDVVISIKSSNTVVMVRSMRLLVEEMEKEGMNYPLHLGVTEAGEGEDGRI 261
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDT+RVSL+E P EI R L + +G + L A
Sbjct: 262 KSAVGIGALLADGIGDTVRVSLSEEPAAEIPVARHLVDYIGKKKGHLMIPAAACPS---- 317
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMS--------VSLDQLKAPELLYKSLA 435
FD+ R P ++E V G H V++S + ++ P+ +Y +
Sbjct: 318 -FDWLR-----PTRRETVAVGNIGGSHV--PVVISNRINGESTICENKDATPDYIY--IG 367
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
K MP + +A I+ D++ L + + + P+ + PL +
Sbjct: 368 GK----MPKQFVAGQSYII--------DYNVYETLNSKPETTGAKLYPIFPAMAMPLIAS 415
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGR 555
+ + + G + E + LK +++ + +++++G
Sbjct: 416 ----------------IKADVKFLTLQFGTPAEEYIACLKAHPEVVVIC-VSNHQNRLGD 458
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL-- 612
+A L + L PV+ + +G + D + A ++GAL++DGL DG+ L
Sbjct: 459 QRA---LVHEMMNAGLKNPVVFAEMYQHGKEEKSDFQLEAAADMGALMIDGLTDGIWLMN 515
Query: 613 --EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP 670
+ P Q D +T+F +LQ R+R +KTEY+SCP CGRTL+DL+E A+I+E T HL
Sbjct: 516 NGDIPAQTID---ETAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIAKIKEATKHLK 572
Query: 671 GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY + V++ I E A + L+ LI
Sbjct: 573 GLKIGIMGCIVNGPGEMADADYGYVGAGPNRVSLYRKQVCVEKNIPQEVAVEHLLALI 630
>gi|445113074|ref|ZP_21377400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens F0103]
gi|444841257|gb|ELX68274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens F0103]
Length = 640
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/666 (39%), Positives = 370/666 (55%), Gaps = 58/666 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT DT D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTDTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKHINAQLRSEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKESHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDVVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + L R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLT----RYIRQKKGHIIVPAETFKG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK--SLAAKLV 439
Y +RR + G+ V H D + + + +L AP+ +Y +L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATH-DAAEHNADIVSKLPAPDYIYTKDTLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 DGQRY----------------IIDYNAYIELAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAA 559
+ T K+ + +V G S E L LK +++ + +++K+
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVIVCVSSHQNKLAE---Q 447
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDD-----------LVIGAGTNVGALLVDGLGD 608
R L + + PV+ + + +D+ + A ++GAL++DGL D
Sbjct: 448 RALVHQMMIAGVENPVVFAQMYQFSVDKDNNNTNEPTAKEQFQLSAAADMGALMIDGLTD 507
Query: 609 GLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
GL L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 508 GLWLMNNGNIPQDDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATK 567
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
+ G+ I IMGCIVNGPGEMADAD+GYVG K+ LY K V+R I E A + L+ L
Sbjct: 568 GMTGLKIGIMGCIVNGPGEMADADYGYVGAGMKKVSLYRKKVCVERNIPEEDAVEHLLAL 627
Query: 728 IKDHGR 733
I++ R
Sbjct: 628 IENDQR 633
>gi|429740137|ref|ZP_19273844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
saccharolytica F0055]
gi|429154186|gb|EKX96931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
saccharolytica F0055]
Length = 609
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 270/642 (42%), Positives = 369/642 (57%), Gaps = 48/642 (7%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G ++PIRVQ+MTT DT + V + RI G +LVR+T QGKREA+ I ++L
Sbjct: 1 MGGDYPIRVQSMTTTDTNNTDACVAQAERIIGAGGELVRLTTQGKREAENLKPIHDALRA 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
K Y+ PLVAD+HF +VA A +K+R+NPGN+ D F+ LEYTD+ Y E++ IE
Sbjct: 61 KGYDTPLVADVHFNANVADVAARYTEKVRINPGNYVDPGRTFKVLEYTDEAYADEIKKIE 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
F P ++ CK+ AVRIG NHGSLSDRIMS YGD+P G+VES EF R C++ DF++
Sbjct: 121 NRFVPFLQICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCMEFLRFCKREDFNDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV++ RLLV EM G +YPLHLGVTEAGEGEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVRSVRLLVHEMEREGMNYPLHLGVTEAGEGEDGRIKSAVGIGALLGDG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPI 396
+GDTIRVSL+E PE EI R L N + R L P K +Y +RR P+
Sbjct: 241 IGDTIRVSLSEEPEAEIPVARALVNYISARGKHLPIPAEP--AKSFNYLSPERRE-TTPV 297
Query: 397 QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR 456
G E + V++S +D+ K + L+ D + S L
Sbjct: 298 GNIGGE---------NVPVVISNRMDKDKVHIVTNADLSP---------DYLYIGSQLPE 339
Query: 457 ELPS----VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLL 512
+ + D+DA + + G++T + Q PH V L+
Sbjct: 340 QFNPQRRYIIDYDAHMQAE-----EKGLLTGV--QAYPIFPHNAVPF---------ISLV 383
Query: 513 PEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLN 572
+ +V G +S E L L+ +++ + +++K G R L L +NL
Sbjct: 384 KADLKFLVLQYGADSDEYLACLRH-HPEIVVVCMSNHQNKTGD---QRALVHELMAHNLY 439
Query: 573 FPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRD-TSFNLL 630
PV+ + + + D + A ++GAL++DGL DG+ L G D D T+F +L
Sbjct: 440 NPVVFAQMYRHSQEEKADFQLEAAADMGALMIDGLTDGVWLMNQGDLSDEDIDATAFGVL 499
Query: 631 QGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADA 690
Q R+R +KTEY+SCP CGRTL+DL+ A IRE T + G+ I IMGCIVNGPGEMADA
Sbjct: 500 QAARLRTSKTEYISCPGCGRTLYDLRSTIARIREATKEMKGLKIGIMGCIVNGPGEMADA 559
Query: 691 DFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
D+GYVG PGKI LY K V+R I + A + L++LIKD+G
Sbjct: 560 DYGYVGAGPGKISLYRKKVCVERNIDEKDAVEHLLKLIKDNG 601
>gi|387132538|ref|YP_006298510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
intermedia 17]
gi|386375386|gb|AFJ09090.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
intermedia 17]
Length = 633
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 264/666 (39%), Positives = 368/666 (55%), Gaps = 64/666 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTNTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKNINAQLRAEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IE+ +P ++ CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKRIEDRLTPFIQICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFE-EKH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA----RYIRQKKGHIIVPAETSKD 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
Y +RR + GE V V + A K A +
Sbjct: 305 FDYLRPERRKTKAVENIGGENV--------------PVVIATRNA-----KEQNADVAST 345
Query: 442 MPFKDLATVDSILLRELPS----VDDHDARLALKRLVDISMGVITPLSEQLTKP----LP 493
+P D V+ +L EL S + D++A + L ++ + P+ P +
Sbjct: 346 LPMPDYIYVNDMLPAELKSGQKYIIDYNAYIELAAKGELPSENVFPIFPTPAIPFIGTVK 405
Query: 494 HAMVLVNLQ-----ELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
M + L+ E K PE + VS ++ E+ ++ + + + + F
Sbjct: 406 SKMKFLVLKYGTPSEEFLACLKYHPEVVVVCVSSHQNKLAEQRALVHQMMIAGVENPVVF 465
Query: 549 NEDKIGRVQAARRLFEYL---SENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
+ ++++ S N N P ++ + A ++GAL++DG
Sbjct: 466 AQ-----------MYQFSTDESNENTNEPS----------AKEQFQLSAAADMGALMIDG 504
Query: 606 LGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE 664
L DGL L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E
Sbjct: 505 LTDGLWLMNNGNISQDDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKE 564
Query: 665 KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
T + G+ I IMGCIVNGPGEMADAD+GYVG K+ LY K V++ I E A + L
Sbjct: 565 ATKGMTGLKIGIMGCIVNGPGEMADADYGYVGAGLKKVSLYRKKVCVEKNIPEEDAVEHL 624
Query: 725 IQLIKD 730
+ LIK+
Sbjct: 625 LALIKN 630
>gi|345884841|ref|ZP_08836241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. C561]
gi|345042340|gb|EGW46441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. C561]
Length = 646
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/661 (40%), Positives = 361/661 (54%), Gaps = 49/661 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTDGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKYLTWYLRRHEKHLLIPAEQYADFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA L L S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYLDLANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
+ L G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 516 IWLMNNGNLSQEDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKG 575
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A + L+ LI
Sbjct: 576 MTGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRKQVCVEHNIPEEEAVEHLLALI 635
Query: 729 K 729
K
Sbjct: 636 K 636
>gi|288800209|ref|ZP_06405668.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288333457|gb|EFC71936.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 603
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 258/636 (40%), Positives = 354/636 (55%), Gaps = 55/636 (8%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT DT D VE+ RI +G +LVR+T QG REA+ I + L K Y +PLVAD+
Sbjct: 1 MTTTDTNDTQACVEQAERIIQKGGELVRLTTQGVREAENMKCINDVLKAKGYEVPLVADV 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P VA A K+R+NPGN+ D F++LEYTD+EY EL IEE F P + CK
Sbjct: 61 HFNPRVADVAATTTQKVRINPGNYVDPARTFKKLEYTDEEYAHELLKIEERFIPFLNICK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ +RIG NHGSLSDRI + YGD+P G+VES EF RIC++ F++ + S+K+SN V+
Sbjct: 121 ENKTGIRIGVNHGSLSDRIRNRYGDTPEGIVESCLEFLRICQRESFNDVVISIKSSNTVI 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV++ RLLV M G YPLHLGVTEAGEGEDGR+KSA+GIG LL DG+GDTIRVSL+E
Sbjct: 181 MVRSMRLLVEAMEKEGMSYPLHLGVTEAGEGEDGRIKSAVGIGALLSDGIGDTIRVSLSE 240
Query: 349 PPEKEIDPCRRLANLGMRAAELQQGVAPFE-----EKHRHYFDFQRRSGQLPIQKEGEEV 403
PE+EI + L + + VAP K +Y RRS GE+V
Sbjct: 241 EPEEEIPVAKHLCDY------ITSKVAPVTLPETPAKDFNYTHPTRRSTCQVGNIGGEKV 294
Query: 404 DYRGVLH--------RDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILL 455
V +D ++ +S D+ +AP+ Y + VG
Sbjct: 295 PVVIVSKPSSMFEEPKDEEEVVIISSDKPQAPKADY------MYVG-------------- 334
Query: 456 RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEG 515
ELP D KR + GV L EQ + + + + N S +
Sbjct: 335 SELPQNIDK------KRCYIVDYGVYNDLKEQYSDLMLYPIFPYN----SVPFISHIQSD 384
Query: 516 TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPV 575
+ +V G +S E + LK +++ + ++++GR R L L +N+ PV
Sbjct: 385 IKFLVLQYGADSDEYVACLKAHPEVVVI-SMAGKDNQLGR---HRALVHDLMNHNITNPV 440
Query: 576 IH-HIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL-LLEAPGQDFDFLRDTSFNLLQGC 633
I + + + + ++ A ++GAL++DGL DG+ L+ A + TSF +LQ
Sbjct: 441 IFAQLYMHSSEEQSEFLLEAAADMGALMIDGLTDGIWLMNAGSLSNAIVEHTSFGILQAA 500
Query: 634 RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG 693
R+R +KTEY+SCP CGRTL+DL+ A I+ T + G+ I IMGCIVNGPGEMADAD+G
Sbjct: 501 RLRVSKTEYISCPGCGRTLYDLRSTIARIKAATEGMKGLKIGIMGCIVNGPGEMADADYG 560
Query: 694 YVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
YVG PGK+ LY + V+R I E+A D L+ LI
Sbjct: 561 YVGAGPGKVSLYRRQECVERNITEEEAVDRLLALIN 596
>gi|189499291|ref|YP_001958761.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
phaeobacteroides BS1]
gi|189494732|gb|ACE03280.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
phaeobacteroides BS1]
Length = 686
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 270/702 (38%), Positives = 393/702 (55%), Gaps = 59/702 (8%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q + S+++ RR TR V G++++G P+RV++MTT T D + +VE+ R+ + G +
Sbjct: 2 QNFPISMYQYSRRLTREVGFGSLSLGGYQPVRVESMTTTHTMDTSASVEQCRRLHEAGCE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
++R+TV +++A+ I++ L + PLVADIHF+ AL+ E + +R+NPGNFA
Sbjct: 62 IIRLTVPTEKDAENLKTIRDQLRRDGVATPLVADIHFSQKAALKAVEFVENVRINPGNFA 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
+ + +F EYT Y EL+ + E F PL+ K K +G ++RIGTNHGSLSDRI+S YG+
Sbjct: 122 NTQ-KFTNEEYTAQSYDSELEKVREAFLPLIGKAKAFGVSMRIGTNHGSLSDRIVSRYGN 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVE+A EFARIC +++FLFSMK+SN VM+QAYR LVA YPLHLG
Sbjct: 181 TPEGMVEAALEFARICEDEGYYDFLFSMKSSNVRVMIQAYRHLVARADTELRHAYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP---------------------- 350
VTEAG+G++GR+KSA+G G LL++GLGDTIRVSLTE P
Sbjct: 241 VTEAGDGDEGRIKSAMGTGALLEEGLGDTIRVSLTEDPVNEVPVGFALVKKYNDLLKVKG 300
Query: 351 EKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLH 410
EK P R+ + RAA + PF+ F +++R + +G+ +
Sbjct: 301 EKGHAPVNRI--IMSRAARACFELPPFDP-----FSYRKRKSGVLSTADGD------IGG 347
Query: 411 RDGSVLMSVSLDQLKA-PELLYKSLAAKLVVGMPFKD----LATVDSILLRELPSVDDHD 465
++ +V+ + A PE L L +LVV K+ L TV + E +++
Sbjct: 348 ESLPMVETVTKASVAANPEQLLAELRRRLVVDSADKEIRSELVTVPAGSAVESEALEPVL 407
Query: 466 ARLALKR-LVDISMGVITPLSEQLTKPLPHAMVLVNLQE---LSTGAYKLLPEGTRLVVS 521
A L + R V ++ G ++ + + L + A V ++++E + + L G L+
Sbjct: 408 AELGVCRSRVGVATGDVSLVPDLLKRA---ARVRLDIREGEMIDKTFFDSLDGGGALLEF 464
Query: 522 LRGDESYEE---LEILKDIDATMI---LHDLPFNEDKIGRVQAARRLFEYLSENNLNFP- 574
E E E+L I M + L F+ V A R L +E L++P
Sbjct: 465 CFIHEHASEQVPAEVLSRIALKMQSKGIEKLLFSIQSPVPVYAYRYLVRGFNEQGLDYPL 524
Query: 575 VIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCR 634
VI + G R + +I T G L DG+GD L LE + + + +FN+LQ R
Sbjct: 525 VIRYHALNKG--RLETLIDCATQTGTLFCDGIGDMLALETDLAESEEI-SLAFNVLQAAR 581
Query: 635 MRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGY 694
+R +KTE++SCP CGRT FDL++ +A I+ + SHL G+ I IMGCIVNGPGEMADADFGY
Sbjct: 582 VRMSKTEFISCPGCGRTYFDLEKTTAVIKARMSHLKGLKIGIMGCIVNGPGEMADADFGY 641
Query: 695 VGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
VG + LYVGK V I + A D L+ LI+ HGRW E
Sbjct: 642 VGSGKSGVSLYVGKECVASNIPEKDAVDRLVDLIRSHGRWVE 683
>gi|288801806|ref|ZP_06407248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica D18]
gi|288335848|gb|EFC74281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica D18]
Length = 642
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 267/661 (40%), Positives = 361/661 (54%), Gaps = 49/661 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIIISIKSSNTVVMVRSVRLLVAEMDKEGMQYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGLGDTIRVSLSEEPECEI-PVAKHLTWYIRRHEKHLLIPAEQYADFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA + + S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYMDIANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
+ L G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 516 IWLMNNGNLSQEDIEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKG 575
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A + L+ LI
Sbjct: 576 MTGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRKQVCVEHNIPEEEAVERLLALI 635
Query: 729 K 729
K
Sbjct: 636 K 636
>gi|317476430|ref|ZP_07935679.1| GcpE protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907456|gb|EFV29161.1| GcpE protein [Bacteroides eggerthii 1_2_48FAA]
Length = 606
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/658 (39%), Positives = 362/658 (55%), Gaps = 69/658 (10%)
Query: 93 VGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK 152
+G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I
Sbjct: 3 IGATPMGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNIN 62
Query: 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKE 212
+L Q Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E
Sbjct: 63 AALRQDGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQE 122
Query: 213 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272
++ I + F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC
Sbjct: 123 VRKIRDRFIPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAE 182
Query: 273 DFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGT 332
F + + S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG
Sbjct: 183 KFMDVVISIKASNTVIMVKTVRLLAHIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGA 242
Query: 333 LLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE---LQQGVAPFEEKHRHYFDFQR 389
LL DGLGDT+RVSL+E PE EI R+L + + + VAP HY +R
Sbjct: 243 LLADGLGDTVRVSLSEAPEAEIPVARKLVDYMTQRRNHPYIPGAVAP----EFHYLSPER 298
Query: 390 RSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLY--KSLAAKLVVGMPFKDL 447
R+ GE + + DG++ + P+ +Y + L + GM +
Sbjct: 299 RTTTAVHNIGGENLPVVIAVRLDGNMDFNPQF----TPDYVYAGRQLPEHPIKGMQY--- 351
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTG 507
+D+ L P D A K SEQL P
Sbjct: 352 -IIDADLWNGQP-----DTWPAFK-------------SEQL--PFVSGF---------NA 381
Query: 508 AYKLLPEGTRLVVSLRG--DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEY 565
+ K L +S G DE+ L+ +I +L + +++G +A L
Sbjct: 382 SLKF------LFISYMGLDDEAIACLKYHPEI----VLVAQSIHPNRLGEYRA---LAHQ 428
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-----EAPGQDF- 619
L L P++ + ++L I + ++GAL++DG DG+LL + G+
Sbjct: 429 LMNEGLKNPLVFFQHYAED-EVENLQIKSAADMGALIIDGFCDGILLFNQSKQKGGKKIS 487
Query: 620 DFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMG 678
D + D T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I++ TSHL G+ I IMG
Sbjct: 488 DKVTDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKQATSHLKGLKIGIMG 547
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
CIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 548 CIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKKNGDYTE 605
>gi|302344796|ref|YP_003813149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica ATCC 25845]
gi|302150145|gb|ADK96407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica ATCC 25845]
Length = 642
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 267/661 (40%), Positives = 361/661 (54%), Gaps = 49/661 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKHLTWYIRRHEKHHLIPAEQYDGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA + L S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYMNLANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
+ L G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 516 IWLMNNGNLSQEDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKG 575
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A + L+ LI
Sbjct: 576 MKGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRKQVCVEHNIPEEEAVERLLALI 635
Query: 729 K 729
K
Sbjct: 636 K 636
>gi|357043355|ref|ZP_09105050.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
histicola F0411]
gi|355368529|gb|EHG15946.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
histicola F0411]
Length = 636
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/656 (40%), Positives = 362/656 (55%), Gaps = 46/656 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG ++P+RVQ+MTT T D AG+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALDIGGDNPVRVQSMTTTSTDDTAGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK F++ + S+K+SN VVMVQ+ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYQFNDIVISIKSSNTVVMVQSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R+ E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKYLTWYIRSHEKHLLIPAEQAPDFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+RR G+ V + ++VS +L P+ +Y V G
Sbjct: 308 LHPKRRETVAAGNIGGDNVPVVIATRKAEHAAVAVSSPELPKPDYIY-------VQGELP 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
+ LA +L D+DA + L ++ + P+ P
Sbjct: 361 EKLAKNQKYIL-------DYDAYMELANSGKRALDGVYPIFPVTGMPF------------ 401
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
LL + +V G S E L LK +++ + +++++G R L
Sbjct: 402 ----ISLLKADVKFLVLKYGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGD---QRALVH 453
Query: 565 YLSENNLNFPVIHHIQFPNGIH----------RDDLVIGAGTNVGALLVDGLGDGLLLEA 614
L + PV+ + + ++ L + A ++GAL++DGL DGL L
Sbjct: 454 QLMIAGVKNPVVFAQMYQHSSSDTNTFKAISPKEQLQLEAAADMGALMMDGLTDGLWLMN 513
Query: 615 PGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T + G+
Sbjct: 514 NGDIAQEDVEQTAFAILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKGMTGLK 573
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
+ IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A + L+ LIK
Sbjct: 574 VGIMGCIVNGPGEMADADYGYVGAGPNKVSLYRKQVCVEHNIPEEEAVEHLLALIK 629
>gi|325859677|ref|ZP_08172807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola CRIS 18C-A]
gi|325482603|gb|EGC85606.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola CRIS 18C-A]
Length = 641
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/661 (40%), Positives = 363/661 (54%), Gaps = 49/661 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGTLDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA +R E + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLAWY-IRRHEKHLLIPGERYSGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
+RR G V + G + VS +L P+ +Y V G +P
Sbjct: 308 LRPERRETVAAGNIGGGNVPVVIATRKTGQAAVDVSSPELPKPDYIY-------VQGRLP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ + IL D+DA + L S+ + P+ P A
Sbjct: 361 ENKVKNLKYIL--------DYDAYMELAHGGRQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------IDTEVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHHIQFPNG-------------IHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ P ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIVFAQMYRHSTPAAEEEPLASQSTTPITPKEQFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
+ L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 516 VWLMNDGNLSQDDIEQTAFAILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKG 575
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A D L+ LI
Sbjct: 576 MTGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRRQVCVEHNIPEEEAVDHLLALI 635
Query: 729 K 729
K
Sbjct: 636 K 636
>gi|282858923|ref|ZP_06268063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bivia JCVIHMP010]
gi|424900000|ref|ZP_18323542.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
bivia DSM 20514]
gi|282588305|gb|EFB93470.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bivia JCVIHMP010]
gi|388592200|gb|EIM32439.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
bivia DSM 20514]
Length = 633
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/656 (40%), Positives = 366/656 (55%), Gaps = 47/656 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VGN+ IG ++P+RVQ+MTT T D +V +V RI G +LVR+T QG+RE
Sbjct: 9 RRKTSVTHVGNLDIGGDNPVRVQSMTTTSTDDTEASVAQVKRIIAAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + N PL AD+HF +VA A K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKNINATLRGEGINTPLCADVHFNANVADVAATTTAKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLVPFINLCKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMVQ+ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDVVISIKSSNTVVMVQSVRLLVAEMEKEGMEYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + MR EKH
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEI-PVAKHLTWYMRK----------HEKHV-- 295
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+P + ++ +Y + R +V D AP ++ A LV +
Sbjct: 296 --------MIPAEAN-KDFNYLAPVRRKTVAAANVGGDN--APVVIATRSAENLVPQVKA 344
Query: 445 KDLATVDSILLR-ELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ T D I ++ LP A+L K+ I V L+ T LP +
Sbjct: 345 SGVPTPDYIYVQGALP------AQLDAKQKYIIDYNVYIELAN--TSKLPKGNIYPIFPV 396
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
L L+ + +V G + E L+ +++ + +++++G R
Sbjct: 397 LGQTFIGLIHSPIKFLVLKYGTPTDEFFACLRHHPEVVVVC-MTTHQNRLGD---QRAFA 452
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDD---------LVIGAGTNVGALLVDGLGDGLLLEA 614
L L P++ + + D + A ++GAL++DGL DG+ L
Sbjct: 453 HQLMNEGLTNPIVFAQMYEHTTTERDTEKVSAKEKFQLEAAADMGALMMDGLVDGVWLMN 512
Query: 615 PGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A+I+E T + G+
Sbjct: 513 NGDLSQDDVEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRTTIAKIKEATKGMKGLK 572
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I +MGCIVNGPGEMADAD+GYVG P K+ LY + V++ I+ ++A + L+ LIK
Sbjct: 573 IGVMGCIVNGPGEMADADYGYVGAGPKKVSLYRKQECVEKNISEDEAVEHLLALIK 628
>gi|218131419|ref|ZP_03460223.1| hypothetical protein BACEGG_03035 [Bacteroides eggerthii DSM 20697]
gi|217986351|gb|EEC52688.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
eggerthii DSM 20697]
Length = 599
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 260/653 (39%), Positives = 360/653 (55%), Gaps = 69/653 (10%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L Q
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINAALRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E++ I
Sbjct: 61 DGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQEVRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC F +
Sbjct: 121 DRFIPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEKFMDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLAHIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE---LQQGVAPFEEKHRHYFDFQRRSGQL 394
LGDT+RVSL+E PE EI R+L + + + VAP HY +RR+
Sbjct: 241 LGDTVRVSLSEAPEAEIPVARKLVDYMTQRRNHPYIPGAVAP----EFHYLSPERRTTTA 296
Query: 395 PIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLY--KSLAAKLVVGMPFKDLATVDS 452
GE + + DG++ + P+ +Y + L + GM + +D+
Sbjct: 297 VHNIGGESLPVVIAVRLDGNMDFNPQF----TPDYVYAGRQLPEHPIKGMQY----IIDA 348
Query: 453 ILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLL 512
L P D A K SEQL P + K
Sbjct: 349 DLWNGQP-----DTWPAFK-------------SEQL--PFVSGF---------NASLKF- 378
Query: 513 PEGTRLVVSLRG--DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENN 570
L +S G DE+ L+ +I +L + +++G +A L L
Sbjct: 379 -----LFISYMGLDDEAIACLKYHPEI----VLVAQSIHPNRLGEYRA---LAHQLMNEG 426
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-----EAPGQDF-DFLRD 624
L P++ + ++L I + ++GAL++DG DG+LL + G+ D + D
Sbjct: 427 LKNPLVFFQHYAED-EVENLQIKSAADMGALIIDGFCDGILLFNQSKQKGGKKISDKVTD 485
Query: 625 -TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNG 683
T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I++ TSHL G+ I IMGCIVNG
Sbjct: 486 ATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKQATSHLKGLKIGIMGCIVNG 545
Query: 684 PGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E
Sbjct: 546 PGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKKNGDYTE 598
>gi|340351509|ref|ZP_08674424.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
pallens ATCC 700821]
gi|339617978|gb|EGQ22582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
pallens ATCC 700821]
Length = 633
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 265/662 (40%), Positives = 369/662 (55%), Gaps = 56/662 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVAHVGALDMGGDNPVRIQSMTTTNTNDTNASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKHINAQLRTEGIMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA----RYIRQKKGHIIVPAETFKD 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS--LAAKLV 439
Y +RR + G+ V H + + L P+ +Y L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATHNAAEHNADI-VSTLPTPDYIYTKDVLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 SGQKY----------------IIDYNAYIDLAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA- 558
+ T K+ + +V G S E L LK +++ + +++K+G +A
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVVVCVSSHQNKLGEQRAL 450
Query: 559 ARRLFEYLSENNLNFPVIHHIQF---------PNGIHRDDLVIGAGTNVGALLVDGLGDG 609
++ EN + F ++ PN ++ + A ++GAL++DGL DG
Sbjct: 451 VHQMMIAGVENPVVFAQMYQFSSEESNKNTNEPNA--KEQFQLSAAADMGALMIDGLTDG 508
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
L L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 509 LWLMNNGNIPQDDIEQTAFGILQAGRLRMVKTEYISCPGCGRTLYDLRSTIARIKEATKS 568
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ I IMGCIVNGPGEMADAD+GYVG K+ LY K V++ I E+A + L+ LI
Sbjct: 569 MTGLKIGIMGCIVNGPGEMADADYGYVGAGMKKVSLYRKKVCVEKNIPEEEAVEHLLSLI 628
Query: 729 KD 730
K+
Sbjct: 629 KN 630
>gi|327312799|ref|YP_004328236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola F0289]
gi|326944264|gb|AEA20149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola F0289]
Length = 641
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/661 (40%), Positives = 362/661 (54%), Gaps = 49/661 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGTLDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI R+ DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRRHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA +R E + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLAWY-IRRHEKHLLIPGERYSGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
+RR G V + G + VS +L P+ +Y V G +P
Sbjct: 308 LRPERRETVAAGNIGGGNVPVVIATRKAGQAAVDVSSPELPKPDYIY-------VQGRLP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ IL D+DA + L S+ + P+ P A
Sbjct: 361 ENKVKNQKYIL--------DYDAYMELAHGGRQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------IDTEVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHHIQFPNG-------------IHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ P ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIVFAQMYRHSTPAAEEEPLASQSTAPITPKEQFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
+ L G D + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T
Sbjct: 516 VWLMTDGNLSQDDIEQTAFAILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKG 575
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A D L+ LI
Sbjct: 576 MTGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRRQVCVEHNIPEEEAVDHLLALI 635
Query: 729 K 729
K
Sbjct: 636 K 636
>gi|325268349|ref|ZP_08134982.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multiformis DSM 16608]
gi|324989491|gb|EGC21441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multiformis DSM 16608]
Length = 641
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/660 (40%), Positives = 362/660 (54%), Gaps = 47/660 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK++ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKEHHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA +R E + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLAWY-IRRHEKHLLIPGERYSGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+RR G V R + VS +L P+ +Y V G
Sbjct: 308 LRPERRKTVAAGNIGGGNVPVVIATRRTDRSAVDVSSPELPKPDYIY-------VQGRLP 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
++ A +L D+DA + L + + P+ P AM
Sbjct: 361 ENKAKDQKYIL-------DYDAYMELAGRDSRMLENVYPIFPVTGMPFVSAM-------- 405
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRLF 563
+ +V G S E L LK M++ + +++++G +A A +L
Sbjct: 406 --------DTSVKFLVLKFGTPSEEFLACLK-THPEMVVVCMTSHQNRLGDQRALAHQLM 456
Query: 564 EYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL 610
+N + F ++ Q N ++ + A ++GAL++DGL DG+
Sbjct: 457 TAGVKNPIVFAQMYRHSTDEGGEEGGNIRQQENTTAKERFQLEAAADMGALMMDGLTDGI 516
Query: 611 LLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 669
L G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+E T +
Sbjct: 517 WLMNNGDLAQEDIEQTAFAILQAGRLRMVKTEYISCPGCGRTLYDLRATIARIKEATKGM 576
Query: 670 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + V+ I E+A + L+ LIK
Sbjct: 577 TGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRRQVCVEHNIPEEEAVEHLLALIK 636
>gi|307564752|ref|ZP_07627280.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
amnii CRIS 21A-A]
gi|307346474|gb|EFN91783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
amnii CRIS 21A-A]
Length = 636
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 368/655 (56%), Gaps = 45/655 (6%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VGN+ IG ++P+R+Q+MTT T D +VE+ RI G +LVR+T QGKRE
Sbjct: 11 RRKSTVTHVGNLNIGGDNPVRIQSMTTTSTDDTIASVEQCKRIIKAGGELVRLTTQGKRE 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + ++ PL AD+HF +VA A K+R+NPGN+ D F++LEY
Sbjct: 71 AENLKNINETLRAEGFDTPLCADVHFNANVADVAAITTAKVRINPGNYVDPARTFKKLEY 130
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P ++ CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 131 TDEEYAQELQKIEDRLVPFIKICKENKTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 190
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DF++ + S+K+SN VVMV + RLLVAEM YPLHLGVTEAGEGEDGR+
Sbjct: 191 FLRIFRKYDFNDVVISIKSSNTVVMVLSVRLLVAEMDKENMHYPLHLGVTEAGEGEDGRI 250
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PEKEI P + +R E + K+ Y
Sbjct: 251 KSAVGIGALLADGIGDTIRVSLSEEPEKEI-PVANHLSWYLRRHEKHIMIPAEVNKYFDY 309
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ RR + G+ V V+ + S D ++ + GMP
Sbjct: 310 LNPTRRKTVAAVNVGGDNVPV---------VIATRSTDN---------AVQQIRINGMPI 351
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
D + L EL DD K ++D ++ + S + +P++ + +
Sbjct: 352 PDYIYIQGKLPEEL---DDKQ-----KYIIDYNVYIDLVNSGK----MPNSNIYPIFPVM 399
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
L+ + +V G + E L+ +++ + +++++G R
Sbjct: 400 GQVFIGLIQAPIKFLVLKYGTPTDEFFACLR-YHPEVVVVCMTTHQNRLG---DQRAFAH 455
Query: 565 YLSENNLNFPVIHHIQFPNGIH---------RDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
L L P+I + + I+ ++ I A ++GAL++DGL DG+ L
Sbjct: 456 QLMNEGLTNPIIFSQMYEHFINEKCCEGISAKEKFQIEAAADMGALMIDGLVDGVWLMNK 515
Query: 616 GQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
G D + T+F++LQ R+R KTEY+SCP CGRTL+DL+ A I+E T + G+ I
Sbjct: 516 GDIPQDDVEQTAFSILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIKEATKGMKGLKI 575
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
IMGCIVNGPGEMADAD+GYVG P K+ LY + V+R I ++A + L+ LI
Sbjct: 576 GIMGCIVNGPGEMADADYGYVGAGPNKVSLYRKQECVERNIPEDEAVERLLNLIN 630
>gi|258647554|ref|ZP_05735023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
tannerae ATCC 51259]
gi|260852341|gb|EEX72210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
tannerae ATCC 51259]
Length = 633
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/667 (41%), Positives = 362/667 (54%), Gaps = 69/667 (10%)
Query: 86 RKTRTVMVGNVAIGS-EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R + V VGN +G +PIR+Q+MTT T D A +V + RI GAD VR+T QG RE
Sbjct: 16 RTSHEVKVGNRPMGGPSNPIRLQSMTTTKTTDTAESVAQTERIVAAGADYVRLTTQGLRE 75
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK L ++PLVAD+HF P+VA A + +R+NPGN+ D F LEY
Sbjct: 76 AENLRNIKAGLQADGVDVPLVADVHFNPAVADAAAAIVEGVRINPGNYVDPARTFRHLEY 135
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL +E F L+ C+++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 136 TDEEYAAELDRLEARFKQLLAICRQHHTALRIGVNHGSLSDRIMSRYGDTPAGIVESCME 195
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV++ RLL A M G D+PLHLGVTEAGEGEDGR+
Sbjct: 196 FLRICVRENFRDVVISIKASNTVVMVRSVRLLCAVMDREGMDFPLHLGVTEAGEGEDGRI 255
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA GIG LL DG+GDTIRVSL+E PE EI +LA A +++ PF R +
Sbjct: 256 KSAAGIGVLLADGIGDTIRVSLSEAPEAEIPVAYKLA-----AHVVERAGHPFIPG-RAF 309
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLD-----QLKAPELLYKSLAAKLV 439
F S P ++ V G H V++S LD P+ +Y
Sbjct: 310 PGFDYVS---PDRRPTIAVGNIGGTHP--PVVISTRLDGDAHFSATLPDYVYAG------ 358
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL--TKPLPHAMV 497
R+LP+V+ A +K ++D + P + + T+ LP +
Sbjct: 359 ----------------RQLPAVEQRKA--GVKYIIDADLWAGEPDTYPVFTTETLPFVGM 400
Query: 498 LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQ 557
+ Y L G + LR + E+ I+ + R+
Sbjct: 401 CKAKMKFLFLTYPAL--GEEVKACLR---HHPEMVIIA-------------QSNHANRLG 442
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG 616
R L L NL+ PV+ +Q G R+D I + GAL DGL DGL+L
Sbjct: 443 EQRALIHELWSENLSTPVVVFLQSAFGDDQREDFQICHAADAGALFFDGLADGLMLFNTT 502
Query: 617 QD------FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP 670
+ D DT+F +LQ R R TKTEY+SCP CGRTL+DLQ+ A I+ +T HL
Sbjct: 503 PEGHRPLAHDLQDDTAFGILQATRQRTTKTEYISCPGCGRTLYDLQQTIARIKAETGHLK 562
Query: 671 GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI-K 729
G+ I IMGCIVNGPGEMADAD+GYVG P K+ LY GK V++ I A L++LI K
Sbjct: 563 GLKIGIMGCIVNGPGEMADADYGYVGAGPEKVSLYRGKVCVEKNIPQADAVKRLLELIEK 622
Query: 730 DHGRWAE 736
D R A+
Sbjct: 623 DRARNAD 629
>gi|145220416|ref|YP_001131125.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeovibrioides DSM 265]
gi|145206580|gb|ABP37623.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeovibrioides DSM 265]
Length = 686
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 267/710 (37%), Positives = 391/710 (55%), Gaps = 81/710 (11%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G +++G PIRV++MT T DV TV + R+ D G +++R+TV
Sbjct: 1 MYQYRRRLTREVSFGPISLGGYQPIRVESMTNTHTADVDATVAQCRRLRDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++AD+ I++ L + + PLVADIHF+ A++ E + IR+NPGN+A R +
Sbjct: 61 PTEKDADSLRLIRDRLRGEGIDTPLVADIHFSARAAMKAVEFVENIRINPGNYASRPKRS 120
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+YTD+EY+ EL+++ F PLVEK ++ G ++RIGTNHGSLSDRI+S G+SP GMV
Sbjct: 121 PGEDYTDEEYRAELEYVRGEFLPLVEKARRLGVSMRIGTNHGSLSDRIVSRRGNSPDGMV 180
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGE 318
E+A EFAR+ + +H+ LFSMK+SN VM+QAYRLLV + YPLHLGVTEAG+
Sbjct: 181 EAALEFARMAEEAGYHDILFSMKSSNVRVMIQAYRLLVERADSELRYAYPLHLGVTEAGD 240
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFE 378
G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+ P G A
Sbjct: 241 GDEGRIKSAMGIGALLEDGLGDTIRVSLTEDPVNEV-PV---------------GFA-IV 283
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS----LDQLKAPELLY--- 431
+K+ ++ + LP+ K E D++G ++ S +L +P L
Sbjct: 284 KKYNDFYLIKGERAHLPL-KHLLEADWKGKNSGTDALFAPFSPFSYARRLSSPVELAGIP 342
Query: 432 ----KSLAAKLVVGMPFKDLATVDSILLREL-PSVDDHDARLALKRLVDISMGVITPLS- 485
A + + +P DL + L+ L P + + R V I +G L
Sbjct: 343 VGGDAPPAVETALHVPLSDLEGATAEALQRLRPDLGEQAIR---SEFVSIPVGSREDLQA 399
Query: 486 -EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
+ L L A VN TG + L + R V +R D + EEL + K++ +++ L
Sbjct: 400 FDALLARLGDAAGRVNASTADTGVFTELLK--REVAKVRLDIAEEEL-LPKELVSSLALS 456
Query: 545 DLPFNE---------------------DKIGRVQAARRLFEYLSENNL------------ 571
P E K + R LS+ L
Sbjct: 457 GRPAVEFSFIHNAAGIAAPAAVLGMLAQKARSLSVDRVFLSVLSDTGLFATRKLVSECLR 516
Query: 572 ---NFPVIHHIQFPNGIHRDDL--VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTS 626
+ PV+ ++F RD L +I + G+L DG+GD + LE+ + D + + +
Sbjct: 517 LGISLPVV--VRF-RSTERDRLSVLIQSAVQAGSLFSDGIGDMISLESVLEPADEI-NLA 572
Query: 627 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGE 686
N+LQG R+R +KTE++SCP CGRT FDL++ +A I+ + +HL G+ I IMGCIVNGPGE
Sbjct: 573 LNILQGARIRMSKTEFISCPGCGRTYFDLEKAAASIKGRMAHLKGLKIGIMGCIVNGPGE 632
Query: 687 MADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
MADADFGYVG +I LYVGK V+ + ++A + LI LI++ GRW +
Sbjct: 633 MADADFGYVGAGKNRISLYVGKECVEENLPEDEAVERLIGLIRERGRWVD 682
>gi|260591970|ref|ZP_05857428.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
veroralis F0319]
gi|260536254|gb|EEX18871.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
veroralis F0319]
Length = 644
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 264/666 (39%), Positives = 367/666 (55%), Gaps = 59/666 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTTVAHVGALNIGGENPVRIQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKHINAKLRAAGYNTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+V S E
Sbjct: 129 TDEEYAQELKKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F I RK +FH+ + S+K+SN VVMV++ RLLV+EM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLHIFRKHNFHDVVISIKSSNTVVMVRSVRLLVSEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ-----QGVAPFEE 379
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R E + A F+
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKYLAWYLRRHEKHILIPGEAYAGFD- 306
Query: 380 KHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
Y +RR G+ V + VS +L +P+ +Y V
Sbjct: 307 ----YLRPERRKTVAAGNIGGDNVPVVIATRHPKQAAVEVSSAELPSPDYIY-------V 355
Query: 440 VG-MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
G +P K IL D+DA + L S+ + P+ P A
Sbjct: 356 QGELPEKQEKKQRYIL--------DYDAYMNLANSGCQSLENVYPIFPVTGMPFISA--- 404
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA 558
+ + + +V G S E L LK +++ + +++++G +A
Sbjct: 405 -------------INKDVKFLVLKFGTPSEEFLACLKAHPEVVVIC-MTNHQNRLGDQRA 450
Query: 559 -ARRLFEYLSENNLNFPVIHH-------IQFPNGIH------RDDLVIGAGTNVGALLVD 604
A +L +N L F ++ IQ N ++ + A ++GAL++D
Sbjct: 451 LAHQLMIAGVKNPLIFAQMYQHSTTDAPIQPANTPASLIVSPKEQFQLEAAADMGALMMD 510
Query: 605 GLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 663
GL DGL L G + + T+F +LQ R+R KTEY+SCP CGRTL+DL+ A I+
Sbjct: 511 GLTDGLWLMNNGDLAQEDIEQTAFAILQAGRLRMVKTEYISCPGCGRTLYDLRTTIARIK 570
Query: 664 EKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDA 723
E T + G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY + ++ I E+A +
Sbjct: 571 EATKGMKGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLYRKQVCIEHNIPEEEAVEH 630
Query: 724 LIQLIK 729
L+ LI+
Sbjct: 631 LLALIR 636
>gi|406879033|gb|EKD27770.1| hypothetical protein ACD_79C00585G0008 [uncultured bacterium]
Length = 596
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/658 (37%), Positives = 357/658 (54%), Gaps = 77/658 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGN+ IG HPIRVQ+MT T D TV++++++ + G++LVR+TV+ ++
Sbjct: 8 RRISREVKVGNIIIGGNHPIRVQSMTNTPTLDTKKTVKQIVKLYEAGSELVRLTVEDEKT 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+N L + N+PL+ADIHF AL + KIR+NPGN + +
Sbjct: 68 AYNLLNIQNELKKHKINVPLIADIHFNYKAALIACDYVQKIRINPGNL---------VAW 118
Query: 205 TDDEY--QKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
+D+ + EL+ I E SPL+EK KK AVRIG NHGSLS RI+ YG++ +GMV SA
Sbjct: 119 EEDKLNPESELKKITERISPLIEKLKKNNIAVRIGVNHGSLSRRILERYGNTVKGMVVSA 178
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E+ I L++H+ + SMK+S P VM++AYR L + +YPLHLGVTEAGEG
Sbjct: 179 IEYIDIFSALNYHDIVLSMKSSIPQVMIEAYRNLADIIDKKNLNYPLHLGVTEAGEGISA 238
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHR 382
R+KS+ G+G LL +G+GDTIR SLTEPPEKEI ++L ++ EL +
Sbjct: 239 RIKSSFGVGALLLEGIGDTIRFSLTEPPEKEIPVAKKL----VKRIELMSSIL------- 287
Query: 383 HYFDFQRRSGQLPIQKEGEEV----DYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKL 438
R S P Q + + V + L+ V L+++K + + +KL
Sbjct: 288 ------RSSNSHPEQNTANQTTRLNNSFTVGNYKSPPLVGVYLNKIKLND-----VNSKL 336
Query: 439 VVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
+ L D + L++ S+ + L +S I + LT L H+ L
Sbjct: 337 EISEA-DFLVLSDKLKLKDYKSISVNKKLFNEINLKKLSENNIQTDNNILTLDLRHSFDL 395
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA 558
L+E P+ L+ + + Y+ + L++ FNE K+
Sbjct: 396 FVLKE--------YPQVKILLTAPTRNYFYDIKKFLRN-----------FNEQKLKN--- 433
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQD 618
Y S + P+++ + F + ++G+LLV L G+++ P
Sbjct: 434 -DIYLLYRS----SMPIMNTVLF------------SSCDLGSLLVSELIKGIIISNPKIK 476
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMG 678
+ L + F +LQ R++ TKTEY+SCP+CGRT F+L E + +I+E TSHLPG+ IAIMG
Sbjct: 477 TNSLLNICFEILQATRLKITKTEYISCPTCGRTQFNLVEATKKIKEATSHLPGLKIAIMG 536
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
CIVNGPGEMADAD+GYVG A GK+ L+ GK + R I E + LI +IK GRW E
Sbjct: 537 CIVNGPGEMADADYGYVGSANGKVTLFKGKNIAGRNILPEDSLKELINIIKSDGRWKE 594
>gi|212550715|ref|YP_002309032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212548953|dbj|BAG83621.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 591
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/648 (35%), Positives = 357/648 (55%), Gaps = 72/648 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V+VGN+ +G E+PIR+Q+MT T D ++++ ++I + G + +R+ + RE
Sbjct: 4 RRKSSAVLVGNIPMGGENPIRIQSMTNTSTLDTEKSIQQCIQIIEAGGEYIRLAARNIRE 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A IKN L+ Y PL+ADIHF +A A+ DK+R+NPGNF + LE
Sbjct: 64 AKNLKNIKNGLIALGYKNPLIADIHFNHKIAETAAKIVDKVRINPGNFVNSTKTLRTLE- 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+YQ+ L++I++ F P + CK+ A+RIG N GSLSDRI++ YG+SP+GMVES E
Sbjct: 123 ---KYQQGLRNIKKHFIPFLNICKENNTAIRIGVNQGSLSDRIINRYGNSPQGMVESCME 179
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+K SN +MVQ LL+ M G ++PLHLGVTEAGEGEDGR+
Sbjct: 180 FLRICITENFLDVVISIKTSNIFLMVQTIHLLIKRMNKEGMNFPLHLGVTEAGEGEDGRI 239
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIGTLL +G+GDTIR+SL+E PE EI L N + E+ +
Sbjct: 240 KSAIGIGTLLTEGIGDTIRISLSENPESEISFAHLLIN--------------YVEEKKSL 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ ++ LPI+K Y ++ R + SV+ + + P+ +Y + + V +P+
Sbjct: 286 LN-EKIFSPLPIKKRLSNKIY-AIVDRSNTDNFSVNANLM--PDFIY--IGKQTVQNIPY 339
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
E+P + VD S+ LS++ T P L QE
Sbjct: 340 ------------EIPVI------------VDFSVF----LSQKNTFP------LFKFQE- 364
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFNEDKIGRVQAARRL 562
A+ + + ++ LR E +E+ + + +I++ + N + R
Sbjct: 365 -KEAWINSKDSLQFII-LRYSELTDEILFHLKNKLQTIIIIYSIQNN------IYEQRAF 416
Query: 563 FEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDF--D 620
L +N I + + H + L + + + G L++ L +G+L++ +
Sbjct: 417 IYALVNKGINNSFILQVSYDEN-HLESLQVKSSIDCGPFLLNKLIEGILIKNKNKSILPQ 475
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCI 680
+ D +F++LQ + TKTEY++CP CGRTLFDLQ +++ T HL G+ IA+MGCI
Sbjct: 476 SVDDCTFSILQATSRKITKTEYIACPGCGRTLFDLQTTLKKVKLVTPHLKGMKIAVMGCI 535
Query: 681 VNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
VNG GE+ADAD+GYVG GK++LY GK +++ I E+A D +++I
Sbjct: 536 VNGIGEVADADYGYVGAGVGKVNLYKGKKCIRKNIPEEKAADEFLRVI 583
>gi|326799610|ref|YP_004317429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium sp. 21]
gi|326550374|gb|ADZ78759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium sp. 21]
Length = 670
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/295 (58%), Positives = 218/295 (73%), Gaps = 1/295 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCES+ R TR V +G+V +G HPIR+Q+MTT DT D G+VE+ +R+ + G +
Sbjct: 12 KYCESLTHYKRWLTREVQIGDVPMGGTHPIRIQSMTTVDTMDTKGSVEQTLRMVEAGCEY 71
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT +EA EIK L+++ +PLVADIHF P+ A A +K+RVNPGN+AD
Sbjct: 72 VRITAPSIKEAQNLAEIKKELLKRGCKVPLVADIHFTPNAAEVAARIVEKVRVNPGNYAD 131
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F+QL YTD YQ EL+ I F+PLV+ CK+YG A+RIGTNHGSLSDRIMS+YGD+
Sbjct: 132 KK-KFDQLTYTDAAYQAELERIYTKFAPLVKICKEYGTAMRIGTNHGSLSDRIMSHYGDT 190
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RIC L ++N + SMK+SNP VMVQAYRLLV +M G +YPLHLGVT
Sbjct: 191 PEGMVESALEFIRICEDLHYYNLVISMKSSNPQVMVQAYRLLVEKMMAEGMNYPLHLGVT 250
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
EAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E R L N ++ AE
Sbjct: 251 EAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPELEAPVARALVNRYVKRAE 305
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 105/147 (71%)
Query: 590 LVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCG 649
L + A T++G LL+DG+G+G+ ++A D L SF +LQ R R +KTEY+SCPSCG
Sbjct: 522 LQLYAATDLGGLLIDGMGNGIWIDAASIPTDKLASASFAILQATRSRISKTEYISCPSCG 581
Query: 650 RTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
RTLFDLQE + IR +T+HL G+ IAIMGCIVNGPGEMADAD+GYVG P ++ LY GK
Sbjct: 582 RTLFDLQETTQMIRSRTNHLKGLKIAIMGCIVNGPGEMADADYGYVGAGPDRVTLYRGKE 641
Query: 710 VVKRGIAMEQATDALIQLIKDHGRWAE 736
VVK+ + A + LI++I+ G W E
Sbjct: 642 VVKKNVQSADALNELIEIIRADGNWVE 668
>gi|385808906|ref|YP_005845302.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
[Ignavibacterium album JCM 16511]
gi|383800954|gb|AFH48034.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
[Ignavibacterium album JCM 16511]
Length = 666
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/317 (55%), Positives = 220/317 (69%), Gaps = 2/317 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYC S+ K R KTR V +G++ +G +PIR+Q+MTT DT + TV + +R+ + G +
Sbjct: 9 KKYCNSLTKYSRYKTREVYIGDIPLGGNNPIRIQSMTTTDTMNTEATVAQTIRMVEAGCE 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
VRIT EA IKN L ++ Y +PL+ADIHF P+ A A +K+R+NPGN+
Sbjct: 69 YVRITAPSINEARNLENIKNELRKRGYKVPLIADIHFTPNAAELAARIVEKVRINPGNYV 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD EY+ EL+ I E F PLV CK+YG A+RIGTNHGSLSDRIMS YGD
Sbjct: 129 DKK-KFELIEYTDAEYEAELERIREKFVPLVRICKEYGTAMRIGTNHGSLSDRIMSRYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF RIC +HN + SMKASNP VMVQAYRLLV +M G +YPLHLGV
Sbjct: 188 TPLGMVESALEFLRICEDEGYHNIVLSMKASNPQVMVQAYRLLVNKMEAEGMNYPLHLGV 247
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE E LAN E +
Sbjct: 248 TEAGGGEDGRIKSALGIGTLLEDGLGDTIRVSLTEDPEFEAPVAISLANR-YEGRENHEP 306
Query: 374 VAPFEEKHRHYFDFQRR 390
+ P +E F++ RR
Sbjct: 307 IKPIDESPIDPFNYNRR 323
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 125/198 (63%), Gaps = 21/198 (10%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL------- 612
RR+F L + +++ PVI + N ++L + + T++GALL+DG GDG+ L
Sbjct: 470 RRVFFELIKQDIHNPVIIKRDY-NKTSFENLQLYSSTDLGALLIDGFGDGVWLNVNELTS 528
Query: 613 -EAPGQDF--DFLRDTS----------FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
EA + F+R + FN+LQ R R +KTEY++CPSCGRTLFDLQE +
Sbjct: 529 IEAESGLYVKSFIRKSESKEKVINRLLFNILQAARQRISKTEYIACPSCGRTLFDLQETT 588
Query: 660 AEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQ 719
IR++T HL GV IAIMGCIVNGPGEMADAD+GYVG KI LY K +V+R I +
Sbjct: 589 EMIRKRTEHLKGVKIAIMGCIVNGPGEMADADYGYVGSGVDKITLYREKNIVRRNIPTKN 648
Query: 720 ATDALIQLIKDHGRWAEP 737
A D LI LIK+ G+W EP
Sbjct: 649 AVDELINLIKEDGKWVEP 666
>gi|406662477|ref|ZP_11070573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cecembia
lonarensis LW9]
gi|405553615|gb|EKB48817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cecembia
lonarensis LW9]
Length = 659
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/294 (57%), Positives = 217/294 (73%), Gaps = 2/294 (0%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + +YC S+ RRKT V VG+V IG + PI VQ+MTT DT D G+VE+ +R+ D
Sbjct: 6 LLEKIRYCNSLTSYSRRKTIPVKVGDVIIGGDSPIVVQSMTTVDTMDTIGSVEQCIRMID 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ EIK L+ + YN PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 AGCQLIRITAPSIKEAENLREIKKELLNRGYNTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +FH+ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFHDIVISMKSSNTQVMVQAYRLLVQKLEQGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKTLVD 298
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 131/211 (62%), Gaps = 18/211 (8%)
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D +ILH + + + A RR F L EN+ PV+ + +P +D ++ A T+
Sbjct: 454 DVVIILHS-----ENLHNMPALRRAFFDLLENHNQLPVVIKVNYPKQ-PQDQTMLYAATD 507
Query: 598 VGALLVDGLGDGLLL-----------EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCP 646
VG LLVDGLG+G+++ E Q SF +LQ R R +KTEY+SCP
Sbjct: 508 VGGLLVDGLGEGIMIGLEAYHGVERSEVLAQ-IKLHNSVSFGVLQAARTRMSKTEYISCP 566
Query: 647 SCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
SCGRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY
Sbjct: 567 SCGRTLFDLQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYK 626
Query: 707 GKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GK VVKR + E+A D LI++I+ G W EP
Sbjct: 627 GKEVVKRSVPSEKAVDELIEIIRKDGMWIEP 657
>gi|404451944|ref|ZP_11016889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Indibacter
alkaliphilus LW1]
gi|403762327|gb|EJZ23409.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Indibacter
alkaliphilus LW1]
Length = 659
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 221/297 (74%), Gaps = 2/297 (0%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+ L++ + KYC+S+ RRKT V VG V IG ++PI VQ+MTT DT D G++E+ +R
Sbjct: 3 TKLMLDKNKYCDSLTGYSRRKTIPVKVGEVIIGGDNPIVVQSMTTVDTMDTQGSIEQCVR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR 186
+ + G L+RIT +EA+ EIK L++K Y+ PLVADIHF P+ A A+ +K+R
Sbjct: 63 MIESGCQLIRITAPSIKEAENLREIKRGLLEKGYSTPLVADIHFTPNAAEIAAKIVEKVR 122
Query: 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246
+NPGN+AD++ +FE +EY D+ YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDR
Sbjct: 123 INPGNYADKK-KFEVIEYPDESYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDR 181
Query: 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD 306
IMS YGD+P GMVESA EF RIC ++H+ + SMK+SN VMVQAYRLLV ++ G+
Sbjct: 182 IMSRYGDTPLGMVESALEFLRICENENYHDIVISMKSSNTQVMVQAYRLLVNKLEEGGFK 241
Query: 307 -YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 242 PYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALVD 298
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 128/192 (66%), Gaps = 11/192 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL---EA 614
A RR F L E N++ PV+ + +P+ +D ++ A T+ G +LVDGLGDG++L
Sbjct: 469 AIRRAFVRLLEQNIDIPVVIKLNYPDQ-DKDQTMLNAATDAGGMLVDGLGDGIMLGISAK 527
Query: 615 PGQDFDFLRDT-------SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
Q+ + DT SF +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR++T
Sbjct: 528 TSQEKLSILDTVKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKRTD 587
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL GV I IMGCIVNGPGEMADADFGYVG GKI LY GK VVKR + E+A D LI++
Sbjct: 588 HLKGVKIGIMGCIVNGPGEMADADFGYVGSGKGKITLYRGKEVVKRSVPSEKAVDELIEI 647
Query: 728 IKDHGRWAEPPA 739
IK G W EP A
Sbjct: 648 IKKDGMWNEPEA 659
>gi|440750422|ref|ZP_20929666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Mariniradius saccharolyticus AK6]
gi|436481463|gb|ELP37644.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Mariniradius saccharolyticus AK6]
Length = 663
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 230/329 (69%), Gaps = 12/329 (3%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + KYC+S+ RRKT V VG+V IG ++PI VQ+MTT DT D G+VE+ +R+ +
Sbjct: 6 LLEKIKYCDSLTSYSRRKTIPVRVGDVIIGGDNPIVVQSMTTVDTMDTQGSVEQCIRMIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ I+N L ++ YN PLVADIHF P+ A A +K+R+NP
Sbjct: 66 SGCQLIRITAPSIKEAENLQNIRNELRKRGYNTPLVADIHFTPNAAEVAARIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +FH+ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFKTYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN--LGMR 366
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + LG
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFESPVAKTLVDRYLGRE 304
Query: 367 -----AAELQQGVAPFEEKHRH---YFDF 387
A + PFE R+ F+F
Sbjct: 305 NHAPIPAITHYPITPFEHNKRNSIEVFNF 333
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 133/210 (63%), Gaps = 16/210 (7%)
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D +ILH D + A RR F L EN+ PV+ + +P +D ++ A T+
Sbjct: 454 DVVIILHS-----DNAHNMAALRRAFVQLMENHSQIPVVVKVDYPAQT-QDKTMLYAATD 507
Query: 598 VGALLVDGLGDGLLL------EAPGQ----DFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
VG LLVDGLG+G+++ EAP + SF +LQ R R +KTEY+SCPS
Sbjct: 508 VGGLLVDGLGEGIMIGLEAYREAPREVLLEQVKLHNSVSFGVLQAARTRMSKTEYISCPS 567
Query: 648 CGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
CGRTLFDLQE +A IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY G
Sbjct: 568 CGRTLFDLQETTAMIRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKG 627
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
K VVKR +A E+A D LI++I+ G W EP
Sbjct: 628 KEVVKRSVASEKAVDELIEIIRKDGMWIEP 657
>gi|343084978|ref|YP_004774273.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyclobacterium marinum DSM 745]
gi|342353512|gb|AEL26042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyclobacterium marinum DSM 745]
Length = 663
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 221/320 (69%), Gaps = 3/320 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC S+ RRKT V +G++ IG ++PI VQ+MTT DT D G++E+ +R+ D G +
Sbjct: 10 QQYCNSLTNYSRRKTIPVRIGDITIGGDNPIVVQSMTTVDTMDTQGSIEQCIRMIDSGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK+ L ++ YN PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 70 LVRITAPSIKEAENLQAIKDGLRKRGYNTPLVADIHFTPNAAEVAAKIVEKVRVNPGNYA 129
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE LEYTD YQ EL+ I E F PLV CK + A+RIGTNHGSLSDRIMS YGD
Sbjct: 130 DKK-KFEVLEYTDASYQAELERIRERFLPLVNICKTHCTAMRIGTNHGSLSDRIMSRYGD 188
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC ++H+ + SMK+SN VMVQAYRLLV ++ G+ YPLHLG
Sbjct: 189 TPLGMVESALEFLRICEAENYHDIVISMKSSNTQVMVQAYRLLVNKLEEGGFKPYPLHLG 248
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG+GEDGR+KSA+GIG LL+DGLGDT+RVSLTE PE E + L N E
Sbjct: 249 VTEAGDGEDGRVKSAVGIGALLEDGLGDTVRVSLTEDPEFESPVVKTLINRYANRPE-AS 307
Query: 373 GVAPFEEKHRHYFDFQRRSG 392
G+ P F + +R+
Sbjct: 308 GIIPISNYPIDPFAYNKRTA 327
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 125/196 (63%), Gaps = 17/196 (8%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
++QA RR L + +N PV+ + + ++ A T+VG LL+DGLGDG+++
Sbjct: 466 QMQAIRRAIVSLIDAEINLPVVPKVSYSEKDAEKTMLFSA-TDVGGLLIDGLGDGMVI-- 522
Query: 615 PGQDFDFLRD-------------TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE 661
G D LRD SF +LQ R R +KTEY+SCPSCGRTLFDLQE +A
Sbjct: 523 -GLDQLQLRDKEEKLAQVKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAL 581
Query: 662 IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQAT 721
IR++T HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY GK V+KR + E A
Sbjct: 582 IRKRTDHLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVMKRSVPSENAV 641
Query: 722 DALIQLIKDHGRWAEP 737
D LI +IK+ G+W EP
Sbjct: 642 DELIDIIKEDGQWIEP 657
>gi|408675508|ref|YP_006875256.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Emticicia
oligotrophica DSM 17448]
gi|387857132|gb|AFK05229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Emticicia
oligotrophica DSM 17448]
Length = 666
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 215/293 (73%), Gaps = 2/293 (0%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
LL ++KYC+S+ RR+T V +G++ +GS++PIRVQ+MTT DT D G+VE+ +R+
Sbjct: 2 LLEIQKKYCKSLTAYSRRQTNQVRIGDLYLGSDYPIRVQSMTTVDTMDTIGSVEQSIRMI 61
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
+ G +LVRIT +EA IKN L ++ Y PLVADIHF P+ A A +K+R+N
Sbjct: 62 ESGCELVRITAPSVKEAQNLENIKNELRKRGYQTPLVADIHFTPNAAELAARIVEKVRIN 121
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN+AD++ +FE ++YT++ Y EL+ I E F PLV CK+YG A+RIGTNHGSLSDRI+
Sbjct: 122 PGNYADKK-RFEVIDYTNESYANELERIRERFLPLVRICKEYGTAMRIGTNHGSLSDRIL 180
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-Y 307
S YGD+P GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + Y
Sbjct: 181 SRYGDTPLGMVESALEFLRICEDENYYNIVISMKSSNPQVMVQAYRLLVQRLEEEKLKPY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
PLHLGVTEAGEGEDGR+KS++GIGTLL+DGLGDT+RVSLTE PE E R L
Sbjct: 241 PLHLGVTEAGEGEDGRIKSSMGIGTLLEDGLGDTVRVSLTEDPEFEAPVARSL 293
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 120/190 (63%), Gaps = 9/190 (4%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG--- 616
R + L + ++ PVI + I D + A T+ G +L++G GDG+++ P
Sbjct: 475 RSFYFQLLKYSIKNPVILSKSY-GAISESDFQLYAATDFGGVLIEGFGDGIMIGLPNFST 533
Query: 617 -----QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG 671
+ + TSF +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR++T HL G
Sbjct: 534 KNEKLERLKTVNSTSFGILQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKRTDHLKG 593
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
V I IMGCIVNGPGEMADAD+GYVG KI LY G+TV+K+ + + A D LI+LIK+
Sbjct: 594 VKIGIMGCIVNGPGEMADADYGYVGIGKDKIALYRGQTVMKKSVHADNAVDELIELIKED 653
Query: 732 GRWAEPPAEE 741
GRW EP E
Sbjct: 654 GRWFEPEVLE 663
>gi|390443501|ref|ZP_10231292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitritalea
halalkaliphila LW7]
gi|389666560|gb|EIM78006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitritalea
halalkaliphila LW7]
Length = 668
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/279 (58%), Positives = 207/279 (74%), Gaps = 2/279 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + RRKT V VG V IG ++PI +Q+MTT DT D G++E+ +R+ + G +L+
Sbjct: 16 YCTSRTRYSRRKTIPVQVGPVTIGGDNPIVIQSMTTVDTMDTGGSIEQCIRMIESGCELI 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L Q+ Y PLVADIHF P+ A A+ +K+R+NPGN+AD+
Sbjct: 76 RITAPSMKEAENLAAIKEGLRQRGYQTPLVADIHFTPNAAEIAAKIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE + YTD+ YQ+EL I E F PLV CK++G A+RIGTNHGSLSDRIMS YGD+P
Sbjct: 136 K-KFELITYTDESYQEELDRIRERFLPLVRICKEHGTAMRIGTNHGSLSDRIMSRYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + +FH + SMK+SN VMVQAYRLLV ++ G+ YPLHLGVT
Sbjct: 195 LGMVESALEFLRICEEENFHQIVISMKSSNTQVMVQAYRLLVQKLEEGGFQPYPLHLGVT 254
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
EAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E
Sbjct: 255 EAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFE 293
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 120/190 (63%), Gaps = 11/190 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG- 616
A R L + PV+ + + + D ++ A T+VG LL+DGLG+G+LL
Sbjct: 473 ALRAALATLMVEGIQVPVVPSLNYGDQ-SADKTMLYAATDVGGLLIDGLGEGVLLRMAAK 531
Query: 617 ------QDFDFLR---DTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
Q D ++ SF +LQ R R TKTEY+SCPSCGRTLFDLQE +A IR++T
Sbjct: 532 SAQPREQLLDMVKLHNSVSFGVLQAARTRMTKTEYISCPSCGRTLFDLQETTAMIRKRTD 591
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY G+ V+KR + E+A D LI++
Sbjct: 592 HLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGQEVIKRSVPSERAVDELIEI 651
Query: 728 IKDHGRWAEP 737
I+ +W EP
Sbjct: 652 IRQDNKWIEP 661
>gi|374585394|ref|ZP_09658486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptonema
illini DSM 21528]
gi|373874255|gb|EHQ06249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptonema
illini DSM 21528]
Length = 665
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 173/327 (52%), Positives = 219/327 (66%), Gaps = 10/327 (3%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
VPR Y +S RR+TR V G + IG +P+R+Q+MTT+DT D V E + + D
Sbjct: 18 FVPRGDYTDSPFLYQRRQTREVKAGAIGIGGANPVRIQSMTTSDTCDTDAVVAEAIALFD 77
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
GA+LVR+T QG +EA I++ L +K Y PLVADIHF+P A+ E +K+R+NP
Sbjct: 78 AGAELVRLTAQGPKEAKNLEVIRSRLNEKGYTGPLVADIHFSPRAAMIAVEYVEKVRINP 137
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GNFAD + +FEQ+EYTDDEY KEL+ I + F PLV + K+ GRA+RIG NHGSLSDRIM+
Sbjct: 138 GNFADTK-RFEQIEYTDDEYVKELERIHDSFKPLVLRAKELGRALRIGVNHGSLSDRIMN 196
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YGD+P GMVESA EF +I DF + + SMKASNP VM+QAYR+LV DYPL
Sbjct: 197 RYGDTPEGMVESAIEFLKIAELYDFRDMVVSMKASNPHVMIQAYRMLVERFRKEKMDYPL 256
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
HLGVTEAG+G DGR+KSAIGIG+LL DG+GDTIRVSLTE EI R + +RA
Sbjct: 257 HLGVTEAGDGRDGRIKSAIGIGSLLLDGIGDTIRVSLTEDAVYEIPAAREI----LRATM 312
Query: 370 LQQGVAPFEEKH-----RHYFDFQRRS 391
++Q + K R + QRRS
Sbjct: 313 VEQQNWTIQAKAENESLRSPYRIQRRS 339
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 117/182 (64%), Gaps = 4/182 (2%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
V R L E L++N P + + + DD + + GALL+ G+GD L + P
Sbjct: 488 VYPYRWLTECLNQNRRAAPFMLYYTPADD---DDALFRMPSEAGALLLSGIGDVLAI-GP 543
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
D T ++LQ R+R TKTE++SCPSCGRTLFDLQ +A I+E T HL GV IA
Sbjct: 544 TMRSDIAYQTVLDILQATRLRITKTEFISCPSCGRTLFDLQSTTARIKEVTGHLKGVKIA 603
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
+MGCIVNGPGEMADADFGYVG APGKI+LY GK V+++ I E AT LI LI++ G W
Sbjct: 604 VMGCIVNGPGEMADADFGYVGSAPGKINLYRGKEVIRKNIDSEIATQELIALIRESGMWQ 663
Query: 736 EP 737
+P
Sbjct: 664 DP 665
>gi|223940466|ref|ZP_03632317.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [bacterium
Ellin514]
gi|223890869|gb|EEF57379.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [bacterium
Ellin514]
Length = 588
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 222/331 (67%), Gaps = 23/331 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGN-----VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
+YC S + RR+TR V VG+ V IG EHP+ +Q+M T DT D +V++ + +
Sbjct: 2 QYCASPYLFQRRQTREVTVGDPARGGVIIGGEHPVVMQSMLTCDTMDTKASVQQTLELVA 61
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G +VRIT ++A I L + +P+VADIHF P A+ A+ +K+R+NP
Sbjct: 62 VGCQIVRITAPTVKDAANLQNIVKELRDQGCFVPIVADIHFKPDAAMEAAKWVEKVRINP 121
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD + +F EYT+++Y+ ELQ IEE F+PLV+ CK GRA+RIGTNHGSLSDRIM+
Sbjct: 122 GNYADSK-KFAIKEYTNEQYEAELQRIEERFTPLVKLCKDLGRAMRIGTNHGSLSDRIMN 180
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDY 307
+GDSP GMVESA EFARI RK D+HNF+FSMK+SNP VM++ YRLLVA + G W+Y
Sbjct: 181 RFGDSPLGMVESALEFARIARKNDYHNFVFSMKSSNPKVMIECYRLLVARLNELGPDWNY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR-------RL 360
P+HLGVTEAGEGEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI CR L
Sbjct: 241 PIHLGVTEAGEGEDGRIKSAIGIGSLLCDGLGDTIRVSLTEDSPNEIAVCRDLLAQIPSL 300
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
+N AE++ PF FQRRS
Sbjct: 301 SNRNATVAEIKPSYDPFT--------FQRRS 323
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 556 VQAARRLFEYLSENNLNFPVIHH--IQFPNGIHRDDL-VIGAGTNVGALLVDGLGDGLLL 612
V A R L L LN P++ + FP + ++ A VGALL DG+GD +L+
Sbjct: 403 VTAFRLLAAKLKHLGLNNPILLKDCLNFPEAPWEPKIALLRASVVVGALLADGIGDAVLI 462
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
LR ++N+LQ R+ KT+YV+CPSCGRTLF+LQ ++A I+ +T HL GV
Sbjct: 463 RGESGGGQSLR-LAYNILQAAGCRSFKTDYVACPSCGRTLFNLQTVTARIKARTDHLKGV 521
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADADFGYVGGAP KI+LYVGK +K I +A D L+ LI++HG
Sbjct: 522 KIAIMGCIVNGPGEMADADFGYVGGAPNKINLYVGKQPIKFNIPEAEAVDRLVDLIREHG 581
Query: 733 RWAEP 737
+W EP
Sbjct: 582 KWVEP 586
>gi|171915869|ref|ZP_02931339.1| GcpE protein [Verrucomicrobium spinosum DSM 4136]
Length = 596
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/282 (57%), Positives = 208/282 (73%), Gaps = 3/282 (1%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+YC ++ RR+TR V VG V IG +PIRVQ+M T+DT+D +++ + + G ++
Sbjct: 5 QYCPDLYHYQRRETREVRVGKVGIGGGNPIRVQSMLTSDTRDTEACIQQTLDLVAVGCEI 64
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT Q + A+ IK L+ ++PLVADIHF P A+ A+ +K+RVNPGNF D
Sbjct: 65 VRITAQTRPIAENLQNIKAGLLAAGCDVPLVADIHFKPDAAMEAAKWVEKVRVNPGNFVD 124
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F EYTDD+Y +EL IEE F PLVE CK RA+RIGTNHGSLSDRIM+ YGD+
Sbjct: 125 KK-KFAIREYTDDQYAEELGRIEEEFIPLVELCKAKDRAMRIGTNHGSLSDRIMNRYGDT 183
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLG 312
P GMVESA EFAR+ R+ D+HNF+FSMKASNP VM++AYRLLVA + G W+YP+HLG
Sbjct: 184 PLGMVESALEFARVARQQDYHNFVFSMKASNPKVMIEAYRLLVARLNDLGGDWNYPIHLG 243
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTEAG+GEDGR+KSAIGIG+LL DG+GDT+RVSLTE EI
Sbjct: 244 VTEAGDGEDGRIKSAIGIGSLLADGIGDTVRVSLTEDAVYEI 285
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 110/151 (72%), Gaps = 7/151 (4%)
Query: 591 VIGAGTNVGALLVDGLGDGLLL---EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
++ A TN+G+LL DG+GD +L+ EAPGQ F S+N+LQ R KT+YV+CPS
Sbjct: 443 LLSAATNIGSLLCDGIGDAILVQGEEAPGQSFRI----SYNILQAAGTRIFKTDYVACPS 498
Query: 648 CGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
CGRTLF+LQ + +IR T HL GV IA+MGCIVNGPGEMADADFGYVGGAP KI+LYVG
Sbjct: 499 CGRTLFNLQTTTQKIRAATGHLKGVRIAVMGCIVNGPGEMADADFGYVGGAPDKINLYVG 558
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAEPP 738
KT VK I +A + LI LIK+H RW + P
Sbjct: 559 KTAVKFNIPEGEAVERLIDLIKEHNRWVDAP 589
>gi|311746091|ref|ZP_07719876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Algoriphagus
sp. PR1]
gi|126576309|gb|EAZ80587.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Algoriphagus
sp. PR1]
Length = 661
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 228/328 (69%), Gaps = 9/328 (2%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q YC+S+ RRKT V VG V IG ++PI VQ+MTT DT D G+VE+ +R+ + G +
Sbjct: 10 QLYCDSLTSYARRKTIPVNVGGVLIGGDNPIVVQSMTTVDTMDTLGSVEQCIRMIESGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK+ L ++ Y PLVADIHF P+ A A +K+RVNPGN+A
Sbjct: 70 LVRITAPSIKEAENLRNIKDELRKRGYKTPLVADIHFTPNAAEVAARIVEKVRVNPGNYA 129
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD YQ+EL I + F PLV+ CK++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 130 DKK-KFEVIEYTDATYQEELNRIRDRFLPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD 188
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC ++ + + SMK+SN VMVQAYRLLV ++ G+ YPLHLG
Sbjct: 189 TPLGMVESALEFLRICEDENYFDIVISMKSSNTQVMVQAYRLLVQKLNEGGFKPYPLHLG 248
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRA--AE 369
VTEAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + RA A+
Sbjct: 249 VTEAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYSHRAPHAK 308
Query: 370 LQQ----GVAPFEEKHRHYFDFQRRSGQ 393
+++ + PF+ + RH + GQ
Sbjct: 309 IKEIDTYPIHPFDHEKRHSNEIYNFGGQ 336
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 120/189 (63%), Gaps = 11/189 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLL--LEAP 615
A RR L E ++ PVI I +P+ ++D ++ A T+VG LL+DGLGDG+ LE
Sbjct: 469 AMRRAIVSLMEAKMDVPVIVKIAYPDQ-NQDLTMLYAATDVGGLLIDGLGDGIFISLEKE 527
Query: 616 GQ--------DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
Q F +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR++T
Sbjct: 528 NQTDREEVLEQIKLHNSVGFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKRTD 587
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL GV I IMGCIVNGPGEMADAD+GYVG GKI LY GK V+KR + A D LI++
Sbjct: 588 HLKGVKIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVMKRSVPSANAVDELIEI 647
Query: 728 IKDHGRWAE 736
IK+ G W E
Sbjct: 648 IKEDGMWNE 656
>gi|390943405|ref|YP_006407166.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Belliella
baltica DSM 15883]
gi|390416833|gb|AFL84411.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Belliella
baltica DSM 15883]
Length = 659
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 230/335 (68%), Gaps = 10/335 (2%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + KYC S+ RRKT V VG+V IG E+PI +Q+MTT DT D G+VE+ +R+ +
Sbjct: 6 LIDKIKYCNSLTSYSRRKTIPVKVGDVTIGGENPIVIQSMTTVDTMDTQGSVEQCIRMIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ IK+ L ++ Y PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 SGCQLIRITAPSMKEAENLQIIKDELRKRGYTTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE ++Y+D+ YQ EL I+E F PLV+ CK+ G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEVIDYSDESYQDELDRIKERFLPLVKICKENGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +++N + SMK+SN VMVQAYR+LV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDEEYYNIVISMKSSNTQVMVQAYRMLVQKLDEGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL----- 363
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAQFLVDRYQGRE 304
Query: 364 GMRAAELQQG--VAPFEEKHRHYFD-FQRRSGQLP 395
G A + + + PFE R + F G +P
Sbjct: 305 GHSAIQEIKNYPITPFEYNKRQTIEVFNFGGGNVP 339
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG- 616
A RR F + +N ++ PV+ +++ +D ++ A T+VG LL+DGLGDG+LL+
Sbjct: 469 ALRRAFVKMIDNEIHLPVVIKVKYSQQT-QDKTMLHAATDVGGLLIDGLGDGVLLDLSNY 527
Query: 617 --QDFDFLRD-------TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
Q+ + + D SF +LQ R R +KTEY+SCPSCGRTLFDLQE +A IR++T
Sbjct: 528 ADQNRETILDQIKLHNSISFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKRTD 587
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL GV I IMGCIVNGPGEMADADFGYVG GKI LY GK VVKR + E+A D LI++
Sbjct: 588 HLKGVKIGIMGCIVNGPGEMADADFGYVGSGKGKITLYKGKEVVKRSVPSEKAVDELIEI 647
Query: 728 IKDHGRWAEP 737
IK G W +P
Sbjct: 648 IKKDGMWIDP 657
>gi|294056523|ref|YP_003550181.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Coraliomargarita akajimensis DSM 45221]
gi|293615856|gb|ADE56011.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Coraliomargarita akajimensis DSM 45221]
Length = 681
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/316 (52%), Positives = 217/316 (68%), Gaps = 1/316 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + RR +R + VG V +G +PIR+Q+MTT DT+DV TV + + +A+ G ++V
Sbjct: 11 YCASRFQAQRRLSREINVGGVRVGGNNPIRIQSMTTTDTQDVDATVAQTLALAEAGCEIV 70
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT K+ A+A EI + ++PLVADIHF P+ A+ A+ +K+R+NPGN+AD+
Sbjct: 71 RITAPNKKAAEALGEISKKVRAAKCDVPLVADIHFLPAAAMEAAKHVEKVRINPGNYADK 130
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F EY+D +Y +EL+ + E FSP+V +CK+ GRA+RIGTNHGSLSDRIM+ YGDSP
Sbjct: 131 K-KFAVKEYSDADYDEELERLHEAFSPIVLRCKELGRAMRIGTNHGSLSDRIMNRYGDSP 189
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RI + + SMKASNP VM++AYRL VA M G +YPLHLGVTE
Sbjct: 190 LGMVESALEFIRIAESHRYQDICLSMKASNPKVMIEAYRLAVARMNQEGMNYPLHLGVTE 249
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG+GED R+KSAIGIGTLL DGLGDTIRVSLTE P E+ R LA+ M + +
Sbjct: 250 AGDGEDARVKSAIGIGTLLNDGLGDTIRVSLTEDPIYEVPVARDLADKAMTLWKQESSPQ 309
Query: 376 PFEEKHRHYFDFQRRS 391
FDF+RR+
Sbjct: 310 GPIRDAIDPFDFRRRA 325
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL DG+GD + +E + ++N+LQG R R +KTE+V+CPSCGRTLFDLQ +
Sbjct: 543 GALLCDGIGDAISIETEPL-LEKATALAYNILQGARARISKTEFVACPSCGRTLFDLQSV 601
Query: 659 SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAME 718
+ IR +T HL GV+IAIMGCIVNGPGEMADADFGYVGGAPGKI+LYVGK VK +
Sbjct: 602 TQRIRSRTDHLKGVTIAIMGCIVNGPGEMADADFGYVGGAPGKINLYVGKECVKYNVPSN 661
Query: 719 QATDALIQLIKDHGRWAEP 737
+A D LI LIK+HG+W EP
Sbjct: 662 EALDRLIDLIKEHGKWVEP 680
>gi|404487049|ref|ZP_11022236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Barnesiella
intestinihominis YIT 11860]
gi|404335545|gb|EJZ62014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Barnesiella
intestinihominis YIT 11860]
Length = 603
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/278 (56%), Positives = 196/278 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G E+P+R+Q+MT T D A +V++ +RI GAD VR+T QG RE
Sbjct: 8 RRKSSIVQIGNTPLGGEYPVRIQSMTNTSTLDTAASVDQCIRIIQAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ EIK L+ + Y PLVADIHF P A A DK+R+NPGNF D F+QL Y
Sbjct: 68 AENLGEIKRELIARGYTTPLVADIHFNPKAADAAAYTVDKVRINPGNFVDSARTFKQLSY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ ++E F P + CK+ A+R+G NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYTAELQKLKERFIPFLNICKEQHTAIRLGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F N + S+KASN VVMV+ RLL+ M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICRSENFDNVVISIKASNTVVMVRTVRLLIETMESEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIGTLL DG+GDTIRVSL+E PE EI +L N
Sbjct: 248 KSAVGIGTLLADGIGDTIRVSLSEAPEAEIPVACKLVN 285
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Query: 570 NLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFN 628
N PV+ ++ +DL + AG + G L+D L DG+ L G L D F
Sbjct: 435 NCKLPVVFMAEYEEK-ESEDLQVKAGADFGPFLLDNLIDGIFLRNNGNISSQRLTDYMFT 493
Query: 629 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMA 688
+LQ R R +KTEY+SCPSCGRT+FDLQ A ++ TSHL G+ I IMGCIVNGPGEMA
Sbjct: 494 ILQAARKRFSKTEYISCPSCGRTMFDLQTTIARVKAATSHLTGLKIGIMGCIVNGPGEMA 553
Query: 689 DADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
DAD+GYVG K+ LY GK +++ I E A + LI LIK HG W++P
Sbjct: 554 DADYGYVGAGRDKVSLYKGKECIEKNIPEEMAIEKLIALIKAHGDWSDP 602
>gi|389582702|dbj|GAB65439.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Plasmodium
cynomolgi strain B]
Length = 598
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 214/584 (36%), Positives = 310/584 (53%), Gaps = 84/584 (14%)
Query: 223 LVEKCK---KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279
+V +C + RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F N +F
Sbjct: 30 VVSRCSQMPRLNRAIRIGTNHGSLSSRVLSYYGDTPLGMVESAFEFSDLCIQNNFFNVVF 89
Query: 280 SMKASNPVVMVQAYRLLVAEMY---VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336
SMKASN +M+Q+YRLLVA Y +G +PLHLGVTEAG G++GR+KS +GIG+LL D
Sbjct: 90 SMKASNAYIMIQSYRLLVARQYERMANGLLFPLHLGVTEAGFGDNGRIKSYLGIGSLLYD 149
Query: 337 GLGDTIRVSLTEPPEKEIDPCRRL-ANLGMR-------AAELQQGVAP----------FE 378
G+GDTIR+SLTE P +E+ PC+ L NL R E ++P FE
Sbjct: 150 GIGDTIRISLTEDPWEELTPCKTLIKNLKKRIFYDDHEGGETDGRISPPGDTSPTLLTFE 209
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKL 438
E R++ +R ++K + V+H + ++ V+ +L+ ++K L +L
Sbjct: 210 EHFRNFNKMTKRR----VEKRED------VMHAECTIGNVVTEKELEDSLQIFKDLNLEL 259
Query: 439 -VVGMPFKDLATVDSILLRELPSVDDHD-------ARLALKRLVDISMGVITPLSEQLTK 490
G K + + D +++ +L + A + L + G + LS +
Sbjct: 260 DQNGNLKKGVKSTDILVIPKLGVLSGRSWATLGKLAEAGVHMLAEYDEGDVAMLSGNTNE 319
Query: 491 P-LPHAMVLVNLQEL--------------STGAYKLLPEGTRLVVSLRGDESYEELE-IL 534
H M V+ L + G L V+ + G E +E +
Sbjct: 320 SGYTHGMGQVSRNTLFYLDLNRVQTILQKNEGKIPLHSSAKGYVLVVNGKEDTNLIEQVF 379
Query: 535 KDIDAT------MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
I +L +E V A RR E ++ N++ P +H+ N + D
Sbjct: 380 NQIKGKNPPPLFFLLKSDTIHE----HVIATRRFNEIVNSLNIDLPYVHYANV-NSTNYD 434
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD---FLRD------------TSFNLLQGC 633
D+++ + VG L+D +GDGL++ +L++ + N+LQ
Sbjct: 435 DMLVDSTLYVGTCLIDLMGDGLIINVTNGHIKRNGYLKEEGVPSRVALNSFLTLNILQDT 494
Query: 634 RMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFG 693
R R KT+Y++CPSCGRTLF++QE + I E T HL GV IA+MGCIVNG GEMADA FG
Sbjct: 495 RARLFKTDYIACPSCGRTLFNIQETTKRIMELTGHLKGVKIAVMGCIVNGIGEMADAHFG 554
Query: 694 YVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
YVG AP KIDLY GK +V+R I E A D L++LIK H W +P
Sbjct: 555 YVGSAPKKIDLYYGKELVERNIPEEDACDKLVELIKKHNMWQDP 598
>gi|440526755|emb|CCP52239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD1]
Length = 602
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPISEIPIC 283
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANTRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|385269706|ref|YP_005812866.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|347974846|gb|AEP34867.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
Length = 609
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 13 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 72
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 73 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 132
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 133 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 192
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 193 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 252
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 253 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 290
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 421 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 478
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 479 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 536
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 537 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 596
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 597 QLLKEHGVWKEP 608
>gi|255310859|ref|ZP_05353429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 6276]
gi|255317159|ref|ZP_05358405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 6276s]
gi|385239569|ref|YP_005807411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9768]
gi|385240490|ref|YP_005808331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11222]
gi|385242345|ref|YP_005810184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9301]
gi|385245955|ref|YP_005814777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11074]
gi|296435574|gb|ADH17748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9768]
gi|296436498|gb|ADH18668.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11222]
gi|296437434|gb|ADH19595.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11074]
gi|297139933|gb|ADH96691.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9301]
gi|440524972|emb|CCP50223.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis K/SotonK1]
gi|440528539|emb|CCP54023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD6]
gi|440533004|emb|CCP58514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis Ia/SotonIa1]
gi|440533898|emb|CCP59408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis Ia/SotonIa3]
Length = 602
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|440537470|emb|CCP62984.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/1322/p2]
gi|440538360|emb|CCP63874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/115]
gi|440539249|emb|CCP64763.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/224]
gi|440541029|emb|CCP66543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L3/404/LN]
Length = 602
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDIIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 KHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|15604776|ref|NP_219560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/UW-3/CX]
gi|8928135|sp|O84060.1|ISPG_CHLTR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|3328450|gb|AAC67648.1| hypothetical protein CT_057 [Chlamydia trachomatis D/UW-3/CX]
gi|440527648|emb|CCP53132.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD5]
gi|440532112|emb|CCP57622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/SotonG1]
Length = 602
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|385243264|ref|YP_005811110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-EC]
gi|385244144|ref|YP_005811988.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-LC]
gi|297748187|gb|ADI50733.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-EC]
gi|297749067|gb|ADI51745.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-LC]
Length = 609
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 13 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 72
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 73 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 132
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 133 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 192
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 193 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 252
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 253 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 290
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 421 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 478
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 479 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 536
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 537 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 596
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 597 QLLKEHGVWKEP 608
>gi|225159172|ref|ZP_03725476.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Diplosphaera
colitermitum TAV2]
gi|224802224|gb|EEG20492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Diplosphaera
colitermitum TAV2]
Length = 375
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 207/287 (72%), Gaps = 2/287 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + TVRR T VG V IG ++P+RVQ+MTT +T+DV TV++ + +A+ G ++V
Sbjct: 3 YCSSRYATVRRFTTEAKVGAVGIGHQNPVRVQSMTTTNTQDVEATVKQSIALAEVGCEIV 62
Query: 136 RITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+T A A +I+ L + +IPLVADIHF PS A+ E +KIRVNPGN+AD
Sbjct: 63 RVTAPNHAAARALKDIRKKLTAAGFGHIPLVADIHFLPSAAMEAVEHVEKIRVNPGNYAD 122
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F EY+D EY +ELQ I E F+PLV + K GR++RIGTNHGSLSDRIM+ YGD+
Sbjct: 123 KK-KFAVNEYSDAEYDRELQRIYEAFTPLVLRAKALGRSLRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RIC +F N + SMKASNP VM+QAYRLLVA M YPLHLGVT
Sbjct: 182 PLGMVESALEFLRICESHNFKNIVLSMKASNPKVMIQAYRLLVARMDQENMHYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
EAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI ++LA
Sbjct: 242 EAGDGEDGRIKSAIGIGSLLHDGLGDTIRVSLTEDSVYEIPVAQKLA 288
>gi|255506631|ref|ZP_05382270.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D(s)2923]
gi|389859506|ref|YP_006361746.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW5]
gi|380248826|emb|CCE14111.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW5]
gi|440531221|emb|CCP56731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis F/SotonF3]
Length = 602
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANTRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|255348420|ref|ZP_05380427.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 70]
gi|255502962|ref|ZP_05381352.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 70s]
gi|385241418|ref|YP_005809258.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/11023]
gi|385245028|ref|YP_005813851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/150]
gi|386262414|ref|YP_005815693.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis Sweden2]
gi|389857755|ref|YP_006359997.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW4]
gi|389858628|ref|YP_006360869.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis E/SW3]
gi|289525102|emb|CBJ14573.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis Sweden2]
gi|296434644|gb|ADH16822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/150]
gi|296438361|gb|ADH20514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/11023]
gi|380249702|emb|CCE13222.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW4]
gi|380250577|emb|CCE12333.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis E/SW3]
gi|440529431|emb|CCP54915.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/SotonE4]
gi|440530324|emb|CCP55808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/SotonE8]
gi|440534793|emb|CCP60303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/Bour]
Length = 602
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|76788770|ref|YP_327856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/HAR-13]
gi|237802492|ref|YP_002887686.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis B/Jali20/OT]
gi|237804407|ref|YP_002888561.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|376282067|ref|YP_005155893.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|123607202|sp|Q3KMW4.1|ISPG_CHLTA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|76167300|gb|AAX50308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A/HAR-13]
gi|231272707|emb|CAX09610.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231273726|emb|CAX10504.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis B/Jali20/OT]
gi|371908097|emb|CAX08716.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|438689975|emb|CCP49232.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/7249]
gi|438691059|emb|CCP48333.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/5291]
gi|438692431|emb|CCP47433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/363]
Length = 602
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 QHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|166155153|ref|YP_001653408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|226741008|sp|B0BB44.1|ISPG_CHLTB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|165931141|emb|CAP06706.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|440525864|emb|CCP51348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/8200/07]
gi|440535688|emb|CCP61201.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/795]
gi|440541917|emb|CCP67431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/UCH-2]
gi|440542807|emb|CCP68321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Canada2]
gi|440543699|emb|CCP69213.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/LST]
gi|440544589|emb|CCP70103.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams1]
gi|440545479|emb|CCP70993.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/CV204]
gi|440913741|emb|CCP90158.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams2]
gi|440914631|emb|CCP91048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams3]
gi|440915521|emb|CCP91938.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Canada1]
gi|440916416|emb|CCP92833.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams4]
gi|440917306|emb|CCP93723.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams5]
Length = 602
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 KHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|183220675|ref|YP_001838671.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910776|ref|YP_001962331.1| deoxyxylulose biosynthesis protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167775452|gb|ABZ93753.1| Deoxyxylulose biosynthesis protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779097|gb|ABZ97395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 675
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/286 (55%), Positives = 213/286 (74%), Gaps = 1/286 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KY ES RR TR V VG+V IG ++PIRVQ+M T++T+D +++++M + G+++
Sbjct: 4 KYNESPFFYRRRPTREVKVGDVGIGGKNPIRVQSMITSNTRDTDASIQQIMDLERAGSEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ + + +PLVADIHF P VAL+ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPNIRKKMKELGLKVPLVADIHFTPQVALKCVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE +EYTD++Y +EL IEEVF+PLV + K+ G A+RIGTNHGSLSDRIM+ +GD+
Sbjct: 124 KK-KFEIIEYTDNDYHEELARIEEVFTPLVLRAKELGVAMRIGTNHGSLSDRIMNRFGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI K + + + SMKASNP VM+QAYR+LVA Y G DYPLHLGVT
Sbjct: 183 PLGMVESALEFIRIAEKNSYRDIVVSMKASNPQVMIQAYRMLVARFYDLGMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
EAG+G+DGR+KSAIGIG+LL+DGLGDT+RVSLTE EI + L
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTVRVSLTEDAIHEIPVAKEL 288
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 126/184 (68%), Gaps = 5/184 (2%)
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
G + + R+L L E++ +P++ ++ N +D L+ A G L+DG+GD + L
Sbjct: 496 GDLLSLRKLACLLQESD--YPIVLNVSAKN---KDQLMYDASIKAGGSLLDGIGDVIRLS 550
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
+ + SF++LQ R+R TKTEY+SCPSCGRT+FDLQ +A+I+EKT HL GV
Sbjct: 551 FGDGEAEECLHLSFDILQATRLRLTKTEYISCPSCGRTMFDLQSTTAKIKEKTGHLKGVK 610
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADADFGYVG GK+ LY GK +VK+G++ +A D LI+LI+++G
Sbjct: 611 IAVMGCIVNGPGEMADADFGYVGAGVGKVHLYKGKEIVKKGVSETEAPDLLIELIRENGM 670
Query: 734 WAEP 737
W +P
Sbjct: 671 WNDP 674
>gi|440536578|emb|CCP62092.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/440/LN]
Length = 602
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQELGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 KHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|166154278|ref|YP_001654396.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 434/Bu]
gi|301335529|ref|ZP_07223773.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2tet1]
gi|226741007|sp|B0B9G5.1|ISPG_CHLT2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|165930266|emb|CAP03752.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis 434/Bu]
gi|440540139|emb|CCP65653.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2/25667R]
Length = 602
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 198/278 (71%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+TV
Sbjct: 6 IQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQELGCDIVRVTV 65
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R F
Sbjct: 66 QGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNMF 125
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GMV
Sbjct: 126 TGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMV 185
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG G
Sbjct: 186 YSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSG 245
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 246 TAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 414 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 471
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 472 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 529
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 530 KHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 589
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 590 QLLKEHGVWKEP 601
>gi|406592276|ref|YP_006739456.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci CP3]
gi|406594551|ref|YP_006741582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci MN]
gi|410858390|ref|YP_006974330.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Chlamydia
psittaci 01DC12]
gi|405782983|gb|AFS21731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci MN]
gi|405788148|gb|AFS26891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci CP3]
gi|410811285|emb|CCO01931.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Chlamydia
psittaci 01DC12]
Length = 606
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 198/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
AFE+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 AFEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I +KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHDKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|330444429|ref|YP_004377415.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pecorum E58]
gi|328807539|gb|AEB41712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pecorum E58]
Length = 600
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/280 (54%), Positives = 204/280 (72%), Gaps = 1/280 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR T +V +G++ +GS+H I++Q+MTT T DVA T+E++ +A+ G ++ R+TVQG +
Sbjct: 4 VRRPTCSVKIGHLYVGSKHSIKIQSMTTTPTADVAATLEQIYSLAECGCEIARVTVQGIK 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA AC +IK+ L+ + IPLVADIHF P A+ V + DK+R+NPGN+ D+R F +
Sbjct: 64 EAQACEKIKDQLLSRGLRIPLVADIHFFPQAAMHVVDFVDKVRINPGNYVDKRNMFSGTK 123
Query: 204 -YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
YT+ Y + L + + FSPLVEKCKK G+A+RIG NHGSLS+R+M YGD+ GMV SA
Sbjct: 124 TYTETSYAQSLVRLRDKFSPLVEKCKKLGKAMRIGVNHGSLSERVMQRYGDTIEGMVISA 183
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E+ IC +LD+H+ +FSMK+SNP VMV AYR L ++ + GW YPLHLGVTEAG G DG
Sbjct: 184 LEYVAICEELDYHDVVFSMKSSNPKVMVAAYRQLAKDLDLRGWRYPLHLGVTEAGMGMDG 243
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
+KSA+GIGTLL +GLGDTIR SLT P EI C++L N
Sbjct: 244 IIKSAVGIGTLLTEGLGDTIRCSLTGCPTTEIPVCQKLIN 283
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 88/130 (67%)
Query: 608 DGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
+ +LL+ P R+ +F LQ +R KTE++SCP CGRTLFDL E+ IR +T
Sbjct: 470 EAVLLDLPNISLSAARNIAFGTLQSSGVRLVKTEFISCPGCGRTLFDLPEVVKRIRARTQ 529
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HLPG+ IA+MGCIVNGPGEMADADFG+VG PG IDLYV VK I M A + L++L
Sbjct: 530 HLPGLKIAVMGCIVNGPGEMADADFGFVGSKPGMIDLYVKHKCVKSHIPMSDAEEELVRL 589
Query: 728 IKDHGRWAEP 737
+K+H W +P
Sbjct: 590 LKEHNVWEDP 599
>gi|456967987|gb|EMG09265.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 298
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 210/288 (72%), Gaps = 1/288 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLAD 290
>gi|406593367|ref|YP_006740546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci NJ1]
gi|405789239|gb|AFS27981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci NJ1]
Length = 606
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESL 287
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 101/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHNKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|407455260|ref|YP_006734151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci GR9]
gi|407457994|ref|YP_006736299.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WS/RT/E30]
gi|405781803|gb|AFS20552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci GR9]
gi|405784835|gb|AFS23581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WS/RT/E30]
Length = 606
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 204/304 (67%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESLLKYTETYLNLPKRNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I +KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHDKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|407456642|ref|YP_006735215.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci VS225]
gi|405783903|gb|AFS22650.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci VS225]
Length = 606
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 101/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHNKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|282877262|ref|ZP_06286094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccalis ATCC 35310]
gi|281300603|gb|EFA92940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccalis ATCC 35310]
Length = 615
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 208/307 (67%), Gaps = 3/307 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V VGN+ IG ++P+R+Q+MTT DT D +E+ RI G +LVR+T QG+RE
Sbjct: 9 RRKSNVVHVGNIDIGGDNPVRIQSMTTTDTNDTEACIEQAERIIQAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + L K Y+ PLVAD+HF +VA A+ +K+R+NPGN+ D +F QLEY
Sbjct: 69 AENLKNIHDGLHAKGYDTPLVADVHFNANVADVAAQHTEKVRINPGNYVDPARKFIQLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELKKIEDRFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN VVMVQ+ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKQQFDNVVISIKASNTVVMVQSVRLLVDTMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI + L + + RA L P KH +
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKHLVDYVAKRAGHLMIPAEP--NKHFN 306
Query: 384 YFDFQRR 390
Y QRR
Sbjct: 307 YLRPQRR 313
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 2/187 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L + N + PV+ Q + D + A ++GAL++DGL DG+ L
Sbjct: 423 RVGDQRALVHEMMNNGVYNPVVF-AQMYRHDEKSDFQLDASADMGALMIDGLTDGIWLMN 481
Query: 615 PGQDFD-FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ D L DT+FN+LQ R+R +KTEY+SCP CGRTL+DLQ+ A I++ T + G+
Sbjct: 482 DGKLSDSVLEDTAFNILQAGRLRMSKTEYISCPGCGRTLYDLQQTIAHIKDATKEMKGLK 541
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG PGK+ LY +T V++ I E+A + L++LI + +
Sbjct: 542 IGIMGCIVNGPGEMADADYGYVGAGPGKVSLYRKQTCVEKNIPTEEAVEHLLKLIHEDQK 601
Query: 734 WAEPPAE 740
A+ AE
Sbjct: 602 TAKSAAE 608
>gi|329942773|ref|ZP_08291552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Cal10]
gi|332287367|ref|YP_004422268.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|384450518|ref|YP_005663118.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|384452494|ref|YP_005665091.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 08DC60]
gi|384453470|ref|YP_005666066.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci C19/98]
gi|384454449|ref|YP_005667044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 02DC15]
gi|392376606|ref|YP_004064384.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila psittaci RD1]
gi|407453951|ref|YP_006733059.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci 84/55]
gi|407460611|ref|YP_006738386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WC]
gi|449071073|ref|YP_007438153.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Mat116]
gi|313847949|emb|CBY16945.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila psittaci RD1]
gi|325507174|gb|ADZ18812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|328815033|gb|EGF85022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Cal10]
gi|328914612|gb|AEB55445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|334692251|gb|AEG85470.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci C19/98]
gi|334694206|gb|AEG87423.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 02DC15]
gi|334695183|gb|AEG88399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 08DC60]
gi|405780710|gb|AFS19460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci 84/55]
gi|405787076|gb|AFS25820.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WC]
gi|449039581|gb|AGE75005.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Mat116]
Length = 606
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I +KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHDKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|237832095|ref|XP_002365345.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii ME49]
gi|211963009|gb|EEA98204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii ME49]
Length = 1283
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 330 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 381
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 382 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 441
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY---- 204
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 442 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 501
Query: 205 ------------TDDEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 502 GDSGRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 561
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 562 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMLR 621
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 622 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 673
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 246/495 (49%), Gaps = 134/495 (27%)
Query: 377 FEEKHRHYFDFQRRS------------GQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 787 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKRQEERILHRDGTLMVR 846
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLREL--PSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G PF+ ++VDSI + L PS D +D A
Sbjct: 847 VSPEWLEIPEVLYKALGCRVVGGKPFRTASSVDSIYVSSLSLPSSDHNDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLSE-----------QLTKP------------------------ 491
R L L + +GV+ P E ++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPKECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREK 665
LG+G+L++ P FNLLQ CR+RNTKTE++SCPSCGRTLFD+Q++SAEIR +
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRLRNTKTEFISCPSCGRTLFDIQKVSAEIRRR 1203
Query: 666 TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
T HLPGV+IA+MGCIVNG GEMADADFGYVGGAPGK+DLYV K VVKRGI+ +A DAL+
Sbjct: 1204 TGHLPGVTIAVMGCIVNGVGEMADADFGYVGGAPGKVDLYVKKKVVKRGISSAEACDALV 1263
Query: 726 QLIKDHGRWAEPPAE 740
LIK HGRW +PP E
Sbjct: 1264 DLIKQHGRWVDPPKE 1278
>gi|221506500|gb|EEE32117.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii VEG]
Length = 1283
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 331 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 382
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 383 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 442
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY---- 204
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 443 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 502
Query: 205 ------------TDDEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 503 GDSGRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 562
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 563 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMMR 622
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 623 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 674
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 246/495 (49%), Gaps = 135/495 (27%)
Query: 377 FEEKHRHYFDFQRRS------------GQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 788 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKKQEERILHRDGTLMVR 847
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLREL--PSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G P + +++VDSI + L PS DHD A
Sbjct: 848 VSPEWLEIPEVLYKALGCRVVGGKPLRTVSSVDSIYISSLSLPS-SDHDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLS-----------EQLTKP------------------------ 491
R L L + +GV+ P +++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPKECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREK 665
LG+G+L++ P FNLLQ CR+RNTKTE++SCPSCGRTLFD+Q++SAEIR +
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRLRNTKTEFISCPSCGRTLFDIQKVSAEIRRR 1203
Query: 666 TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
T HLPGV+IA+MGCIVNG GEMADADFGYVGGAPGK+DLYV K VVKRGI+ +A DAL+
Sbjct: 1204 TGHLPGVTIAVMGCIVNGVGEMADADFGYVGGAPGKVDLYVKKKVVKRGISSAEACDALV 1263
Query: 726 QLIKDHGRWAEPPAE 740
LIK HGRW +PP E
Sbjct: 1264 DLIKQHGRWVDPPKE 1278
>gi|221486797|gb|EEE25043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii GT1]
Length = 1283
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 331 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 382
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 383 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 442
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY---- 204
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 443 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 502
Query: 205 ------------TDDEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 503 GDSRRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 562
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 563 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMLR 622
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 623 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 674
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 246/495 (49%), Gaps = 135/495 (27%)
Query: 377 FEEKHRHYFDFQRRS------------GQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 788 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKRQEERILHRDGTLMVR 847
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLREL--PSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G P + +++VDSI + L PS DHD A
Sbjct: 848 VSPEWLEIPEVLYKALGCRVVGGKPLRTVSSVDSIYVSSLSLPS-SDHDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLSE-----------QLTKP------------------------ 491
R L L + +GV+ P E ++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPRECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREK 665
LG+G+L++ P FNLLQ CR+RNTKTE++SCPSCGRTLFD+Q++SAEIR +
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRLRNTKTEFISCPSCGRTLFDIQKVSAEIRRR 1203
Query: 666 TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
T HLPGV+IA+MGCIVNG GEMADADFGYVGGAPGK+DLYV K VVKRGI+ +A DAL+
Sbjct: 1204 TGHLPGVTIAVMGCIVNGVGEMADADFGYVGGAPGKVDLYVKKKVVKRGISSAEACDALV 1263
Query: 726 QLIKDHGRWAEPPAE 740
LIK HGRW +PP E
Sbjct: 1264 DLIKQHGRWVDPPKE 1278
>gi|384451521|ref|YP_005664119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 01DC11]
gi|334693231|gb|AEG86449.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 01DC11]
Length = 606
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 196/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKCLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLTAVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I +KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHDKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|196232814|ref|ZP_03131664.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chthoniobacter flavus Ellin428]
gi|196223013|gb|EDY17533.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chthoniobacter flavus Ellin428]
Length = 643
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 204/312 (65%), Gaps = 34/312 (10%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC + ++ RR TR V GNV IG +PIRVQ+M T DT D A ++++ + + G ++V
Sbjct: 22 YCLNPYRYSRRATREVRAGNVGIGGANPIRVQSMITCDTMDTAASIQQTLDLVAVGCEIV 81
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT ++A I L + +P+VADIHF P A+ A+ +K+RVNPGN+AD
Sbjct: 82 RITAPTVKDAANLQHIVAGLRAQGCEVPIVADIHFKPEAAMEAAKWVEKVRVNPGNYADS 141
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F EYTD EY EL I E FSPLV+ CK++GRA+RIGTNHGSLSDRIM+ YGDSP
Sbjct: 142 K-KFAVKEYTDTEYAAELDRIRERFSPLVQFCKEHGRAMRIGTNHGSLSDRIMNRYGDSP 200
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM--------------- 300
GMVESA EFARI R+LD+H F+FSMKASNP VM++AYRLLVA +
Sbjct: 201 LGMVESALEFARIARELDYHAFVFSMKASNPKVMIEAYRLLVARLDELGNAEGEMRNVEG 260
Query: 301 ------------------YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
H W YP+HLGVTEAG+GEDGR+KSAIGIG+LL DG+GDTI
Sbjct: 261 GMPNKGGGAEPSPNSEFRTPHSWSYPIHLGVTEAGDGEDGRIKSAIGIGSLLNDGIGDTI 320
Query: 343 RVSLTEPPEKEI 354
RVSLTE EI
Sbjct: 321 RVSLTEDSVHEI 332
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 131/221 (59%), Gaps = 31/221 (14%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVI-------------HHIQF---------PNG 584
P +E + +V A++ + L+ PVI H I PN
Sbjct: 424 PLDESAVAKVNASQDPVVVTIADGLDVPVIAAYRLLAARLEERHPILLKDTLAPSADPNA 483
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLE---APGQDFDFLRDTSFNLLQGCRMRNTKTE 641
D L+ A +G+LL DG+GD +L++ APGQ ++N+LQ R KT+
Sbjct: 484 PFLDTLLTAA-KRIGSLLCDGIGDAVLVQGEHAPGQSLRL----AYNILQAAGSRIFKTD 538
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
YV+CPSCGRTLF+LQ +A I+ TSHL GV IAIMGCIVNGPGEMADADFGYVGGAPGK
Sbjct: 539 YVACPSCGRTLFNLQTTTARIKAATSHLKGVKIAIMGCIVNGPGEMADADFGYVGGAPGK 598
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP-PAEE 741
++LYVGK VK I +A D L LI++HG+W +P PA E
Sbjct: 599 VNLYVGKKPVKFNIPEVEAVDRLQDLIREHGKWVDPAPAAE 639
>gi|407459236|ref|YP_006737339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci M56]
gi|405785775|gb|AFS24520.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci M56]
Length = 606
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 196/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
TD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTSTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESL 287
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 101/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T G LL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGTLLLDGLGEAVILDLPNIPLTVVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I +KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTKRIHDKTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME+A + L+ L+K+HG W +P
Sbjct: 580 KAHIPMEKAEEELVSLLKEHGVWKDP 605
>gi|89898391|ref|YP_515501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
felis Fe/C-56]
gi|123483227|sp|Q254D2.1|ISPG_CHLFF RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|89331763|dbj|BAE81356.1| 1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase [Chlamydophila
felis Fe/C-56]
Length = 606
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 201/304 (66%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+T RR T +V +G++ +GSEH I++Q+MTT T DV TV ++ + + D+ R+TVQG
Sbjct: 9 QTARRYTHSVKIGSLFVGSEHSIKMQSMTTTPTSDVDATVAQICSLVEAKCDIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ +IPLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 VKEAQACEHIKERLLTMGLDIPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFSG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV S
Sbjct: 129 KTYTDKNYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERIMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ ++C L + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIKVCENLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTEEIPVCESLLKHTTIYLNLPKQENPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+G++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VSIATEFGALLLDGLGEGVILDLPNIPLPTVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ IR KT HL G+ IA+MGCIVNGPGEMADADFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTTRIRNKTKHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME A + L +L+++HG W +P
Sbjct: 580 KAHIPMEDAEEELFRLLQEHGVWKDP 605
>gi|157042739|gb|ABV02021.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Nicotiana
langsdorffii x Nicotiana sanderae]
Length = 164
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/164 (91%), Positives = 155/164 (94%)
Query: 578 HIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRN 637
HI FPN HRDDLVIGAG N GALLVDGLGDG+LLEAP QDFDFLR+TSFNLLQGCRMRN
Sbjct: 1 HIHFPNDTHRDDLVIGAGANAGALLVDGLGDGILLEAPDQDFDFLRNTSFNLLQGCRMRN 60
Query: 638 TKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
TKTEYVSCPSCGRTLFDLQEISA+IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG
Sbjct: 61 TKTEYVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 120
Query: 698 APGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
APGKIDLYVGKTVVKRGI ME ATDALIQLIKD+GRW +PPAEE
Sbjct: 121 APGKIDLYVGKTVVKRGIQMEHATDALIQLIKDNGRWVDPPAEE 164
>gi|29840185|ref|NP_829291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
caviae GPIC]
gi|33301244|sp|Q823I7.1|ISPG_CHLCV RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29834533|gb|AAP05169.1| gcpE protein [Chlamydophila caviae GPIC]
Length = 606
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GSEH I++Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRHTHSVKIGNLYVGSEHSIKMQSMTTTPTADVEATVTQICALVEAKCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ IPLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLLSMGIAIPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE F+PLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKNYADSLLRLEEKFTPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGIGLD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTTEIPVCESLLKHTTTYLDLPKKENPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SETF 312
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 104/146 (71%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F+ LQ +R KTEY+SCP CGRT
Sbjct: 460 VSIATEFGALLLDGLGEAVILDLPNVSLPTVREIAFSTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ IREKT HL G+ IA+MGCIVNGPGEMAD+DFG+VG G IDLYV T V
Sbjct: 520 LFDLPEVTTRIREKTKHLVGLKIAVMGCIVNGPGEMADSDFGFVGSKTGMIDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I ME A + L++L+++HG W +P
Sbjct: 580 KAHIPMEDAEEELVRLLQEHGVWKDP 605
>gi|15618288|ref|NP_224573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae CWL029]
gi|15835906|ref|NP_300430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae J138]
gi|16752666|ref|NP_444931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae AR39]
gi|33241718|ref|NP_876659.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae TW-183]
gi|8928116|sp|Q9Z8H0.1|ISPG_CHLPN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|4376650|gb|AAD18517.1| GcpE Protein [Chlamydophila pneumoniae CWL029]
gi|7189308|gb|AAF38230.1| gcpE protein [Chlamydophila pneumoniae AR39]
gi|8978745|dbj|BAA98581.1| GcpE protein [Chlamydophila pneumoniae J138]
gi|33236227|gb|AAP98316.1| AarC [Chlamydophila pneumoniae TW-183]
Length = 613
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 207/302 (68%), Gaps = 1/302 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +GN+ IGS+H I+ Q+MTT T D+ TVE++ +A+ D+VR+TVQG +E
Sbjct: 12 RRKTHTVRIGNLYIGSDHSIKTQSMTTTLTTDIDSTVEQIYALAEHNCDIVRVTVQGIKE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE- 203
A AC +IK L+ NIPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F+ +
Sbjct: 72 AQACEKIKERLIALGLNIPLVADIHFFPQAAMLVADFADKVRINPGNYIDKRNMFKGTKI 131
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT+ Y + L +EE F+PLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV SA
Sbjct: 132 YTEASYAQSLLRLEEKFAPLVEKCKRLGKAMRIGVNHGSLSERIMQKYGDTIEGMVASAI 191
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ +C KL++ + +FSMK+SNP +MV AYR L ++ GW YPLHLGVTEAG G DG
Sbjct: 192 EYIAVCEKLNYRDVVFSMKSSNPKIMVTAYRQLAKDLDARGWLYPLHLGVTEAGMGVDGI 251
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
+KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF +H
Sbjct: 252 IKSAVGIGTLLAEGLGDTIRCSLTGCPTTEIPVCDSLLRHTKIYLDLPEKKNPFSLQHSE 311
Query: 384 YF 385
F
Sbjct: 312 NF 313
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+ +R FE ++ F N +++ I T GALL+DGLG+ ++L+ P
Sbjct: 428 IHTSRDFFEKQGHQGKPTKLVFSRDFDN---KEEAAISIATEFGALLLDGLGEAVVLDLP 484
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+ +F LQ +R KTEY+SCP CGRTLFDL+E++ IR++T HLPG+ IA
Sbjct: 485 NLPLQDVLKIAFGTLQNAGVRLVKTEYISCPMCGRTLFDLEEVTTRIRKRTQHLPGLKIA 544
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFG+VG G IDLYV T VK I ME A + LI+L+++HG W
Sbjct: 545 IMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELIRLLQEHGVWK 604
Query: 736 EP 737
+P
Sbjct: 605 DP 606
>gi|269925149|ref|YP_003321772.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermobaculum terrenum ATCC BAA-798]
gi|269788809|gb|ACZ40950.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermobaculum terrenum ATCC BAA-798]
Length = 690
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/284 (57%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
V +YC + RR T VMVGNV +G +PIRVQ+MTT TKDV TV +++ +A
Sbjct: 7 VTSNRYCVDPYSYKRRCTHEVMVGNVGVGGNNPIRVQSMTTTRTKDVESTVNQIVSLARV 66
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPG 190
G ++VR+T +A A +IK L KN +IP+VAD+HF+P A+ A DK+R+NPG
Sbjct: 67 GCEIVRVTTPTPADARAIKDIKKELQSKNIHIPIVADVHFSPHAAMEAALWADKVRINPG 126
Query: 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
NFAD + F EYTD+EY K L+ I E PLV +CK+ G ++RIGTNHGSLSDRIMS
Sbjct: 127 NFADTKL-FHIKEYTDEEYAKHLEKIAEKLYPLVMRCKERGISMRIGTNHGSLSDRIMSR 185
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310
YGD+P GMVESA EF R+C + + + + SMKASNP VM+ AYRLL A M +G YP H
Sbjct: 186 YGDTPLGMVESALEFVRMCEEWGYKDIILSMKASNPKVMIAAYRLLAARMLEYGMTYPFH 245
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
LGVTEAG GEDGR+KSAIGIGTLL+DG+GDT+RVSLTE PE EI
Sbjct: 246 LGVTEAGNGEDGRIKSAIGIGTLLEDGIGDTVRVSLTEDPENEI 289
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 120/188 (63%), Gaps = 8/188 (4%)
Query: 551 DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL 610
D+ R++A R L L E ++ ++ + DDL I A +G+LL DG+G +
Sbjct: 502 DRSYRIRAYRLLDSRLRELGKDWNLLLTVT------EDDL-IDASIGLGSLLCDGIGSMV 554
Query: 611 LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP 670
+E + ++ FN+LQ R +K E+++CPSCGRTLFDLQ + +I+ KT HL
Sbjct: 555 SIEG-NKPYEEKISLVFNILQASGARISKAEFIACPSCGRTLFDLQTTTEKIKSKTGHLK 613
Query: 671 GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
GV IA+MGCIVNG GE+ADADFGY+G GK++L+VGKT V++ + E A D L+ LIK
Sbjct: 614 GVKIAVMGCIVNGLGELADADFGYMGSGEGKVNLFVGKTCVEKNVPEEIAADKLVDLIKA 673
Query: 731 HGRWAEPP 738
HGRW +PP
Sbjct: 674 HGRWIDPP 681
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
G +V+ +A + ++ + +++ + ++AYRLL + + G D+ L L
Sbjct: 469 GKHDYSVVDELISYALKVEQFGVNDLILALRIPDRSYRIRAYRLLDSRLRELGKDWNLLL 528
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTE D + ++IG+G+LL DG+G + + +P E++I
Sbjct: 529 TVTE-----DDLIDASIGLGSLLCDGIGSMVSIEGNKPYEEKI 566
>gi|254444508|ref|ZP_05057984.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Verrucomicrobiae bacterium DG1235]
gi|198258816|gb|EDY83124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Verrucomicrobiae bacterium DG1235]
Length = 678
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 221/317 (69%), Gaps = 3/317 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S T RR +R V+VG+V +G ++PIR+Q+MTT T+DV TV++ + +A+ G ++V
Sbjct: 4 YCVSRFATQRRVSREVLVGSVGVGGDNPIRIQSMTTTLTQDVVATVKQSIALAESGCEIV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+T K A A +I+ ++ IPLVADIHF P+ A+ E +K+RVNPGN+AD
Sbjct: 64 RVTAPNKPAARALKDIRAQFSAAGFSHIPLVADIHFLPNAAMEAVEHVEKVRVNPGNYAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+ +F LEYTD EY ELQ + E FSPLV++ K+ GR++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 NK-KFAVLEYTDSEYNAELQRLYESFSPLVKRAKELGRSLRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI + F++ + SMKASNP VM++AYRLLV M YPLHLGVT
Sbjct: 183 PLGMVESALEFLRIAQSHGFYDMILSMKASNPKVMIEAYRLLVQHMDKEDMAYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE P EI + +AN M + +
Sbjct: 243 EAGDGEDGRIKSAIGIGSLLMDGLGDTIRVSLTEDPVYEIPVAQAIANKIMARWNIDAHI 302
Query: 375 APFEEKHRHYFDFQRRS 391
P ++ F FQRR+
Sbjct: 303 EPADDS-IDPFHFQRRT 318
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 112/151 (74%), Gaps = 5/151 (3%)
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT--SFNLLQGCRMRNTKTEYVSCP 646
D ++ A G+LL DGLGD + +E+ + D +R T ++N+LQG R TKTE+V+CP
Sbjct: 525 DKLLDASILTGSLLCDGLGDMVSIES---ETDLVRSTRLTYNVLQGAGSRITKTEFVACP 581
Query: 647 SCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
SCGRTLFDLQ + IREKT HL GV IAIMGCIVNGPGEMADADFGYVGGAP KI+LYV
Sbjct: 582 SCGRTLFDLQSTTQRIREKTGHLKGVKIAIMGCIVNGPGEMADADFGYVGGAPAKINLYV 641
Query: 707 GKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GKT VK I +A + LI LI++HG+W +P
Sbjct: 642 GKTCVKYNIPQAEADERLIDLIREHGKWVDP 672
>gi|381205834|ref|ZP_09912905.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [SAR324
cluster bacterium JCVI-SC AAA005]
Length = 562
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 206/283 (72%), Gaps = 1/283 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
++ +RRK+R V +GNV +G + PIR+Q+M T+DT DV +EE+ + G +++R+TV
Sbjct: 1 MNSLIRRKSRVVRIGNVLVGGQEPIRIQSMLTSDTCDVPKVIEEMESLVQAGCEIIRVTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+ +A ++I+ + + NIPLVADIHF P +A+ AE +K+R+NPGN+ D++ +F
Sbjct: 61 PNHKSVEALYKIREVMFNRGINIPLVADIHFNPQLAVNAAEIVEKVRINPGNYVDKK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
E +EYT+ +YQ+ELQ +EE PL+++ KKY R +RIGTNHGSLSDR+M+ +GD+P+GM
Sbjct: 120 EIIEYTEVQYQEELQRLEEKLLPLIKQLKKYDRCLRIGTNHGSLSDRVMNRFGDTPQGMA 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA EF RI K + + SMKASNP+VM AY+ +V +M + +YPLHLGVTEAG+G
Sbjct: 180 ESAMEFLRILEKHQYFETVISMKASNPIVMRAAYQEIVRKMDLEKMNYPLHLGVTEAGDG 239
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
DGR+KSA+GIG+LL DG+GDTIRVSLTEP EI R + N
Sbjct: 240 IDGRVKSALGIGSLLLDGIGDTIRVSLTEPATSEIPAARSILN 282
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 102/149 (68%), Gaps = 1/149 (0%)
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
+D ++G +G+L++ + GL++ + ++ +LLQ R++ K +++SCPS
Sbjct: 408 EDELMGLAAGLGSLILMKMIQGLIVPTTNLNHPTVQ-MILSLLQAARVKTYKADFISCPS 466
Query: 648 CGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
CGRT FDLQ +A+I+ KT HL GV I IMGC+VNGPGEMADADFGYVG GKI+LY G
Sbjct: 467 CGRTHFDLQTATAKIKMKTEHLKGVKIGIMGCVVNGPGEMADADFGYVGSGSGKINLYKG 526
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAE 736
+ V++ I E+A D LI+LI++HG W +
Sbjct: 527 HSCVRKNIPEEKAVDYLIELIQEHGMWQD 555
>gi|410096505|ref|ZP_11291492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides goldsteinii CL02T12C30]
gi|409226469|gb|EKN19378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides goldsteinii CL02T12C30]
Length = 612
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/278 (55%), Positives = 193/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G E+PIR+Q+M T D +V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVVNIGNTPLGGENPIRIQSMANVSTMDTEASVRQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 68 ARNLGEIRKELNAQGYTTPLVADIHFNPRAADAAAEVVEKVRINPGNYVDKVKTFDLLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P ++ CKK+G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLDICKKHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICRDENFPDVVISIKASNTVVMVRTVRLLVRTMEAEDMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L N
Sbjct: 248 KSAVGIGALLTDGIGDTIRVSLSEDPEAEIPVARKLVN 285
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 6/205 (2%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
LEILK D T + + + +G +AA L + PVI H + + ++ L
Sbjct: 411 LEILKQ-DKTAVAVLSTHHRNGVGSQRAA---MHKLLAAGCDIPVILHRDY-HEPDKEAL 465
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCG 649
+ A + G LL+DG GDG++L + + D+ F +LQ R R +KTEY+SCPSCG
Sbjct: 466 QLKAAADFGTLLLDGFGDGIMLHNNDECEALVTDSYMFGILQATRSRISKTEYISCPSCG 525
Query: 650 RTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
RTL+DLQ A I+E TSHL G+ I IMGCIVNGPGEMADAD+GYVG G+I LY GK
Sbjct: 526 RTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGQISLYKGKE 585
Query: 710 VVKRGIAMEQATDALIQLIKDHGRW 734
V + I E A + L+QLIK++G W
Sbjct: 586 CVLKNIPEEDAVERLVQLIKENGDW 610
>gi|424825092|ref|ZP_18250079.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus LLG]
gi|333410191|gb|EGK69178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus LLG]
Length = 606
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GS+H I+ Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVAQICALVEARCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KIYTDKHYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAQDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KS++GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSSVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESLLKHTTTYLNLPKKNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG G +DLYV T V
Sbjct: 520 LFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMVDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I MEQA D L+ L+K+HG W +P
Sbjct: 580 KAHIPMEQAEDELVLLLKEHGVWKDP 605
>gi|408794092|ref|ZP_11205697.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408461327|gb|EKJ85057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 661
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 203/270 (75%), Gaps = 1/270 (0%)
Query: 92 MVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEI 151
MVG V IG ++PIR+Q+M T++T+D +++++ + G+++VR+TV + +AD I
Sbjct: 1 MVGGVGIGGKNPIRIQSMITSNTRDTEASIKQISDLEKAGSEIVRLTVPSQADADNLPNI 60
Query: 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQK 211
+ + + +PLVADIHF P VAL+ E +K+R+NPGNFAD++ +FE +EYTD +Y +
Sbjct: 61 RKRMKELGLKVPLVADIHFTPQVALKCVEWVEKVRINPGNFADKK-KFEIIEYTDKDYNE 119
Query: 212 ELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271
EL+ IEEVF+PLV + K+ G A+RIGTNHGSLSDRIM+ +GD+P GMVESA EF RI +
Sbjct: 120 ELERIEEVFTPLVLRAKELGVAMRIGTNHGSLSDRIMNRFGDTPLGMVESALEFIRIAER 179
Query: 272 LDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIG 331
+ + + SMKASNP VM+QAYR+LV+ Y G DYPLHLGVTEAG+G+DGR+KS+IGIG
Sbjct: 180 NSYRDIVVSMKASNPQVMIQAYRMLVSRFYDLGMDYPLHLGVTEAGDGKDGRIKSSIGIG 239
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
+LL+DGLGDTIRVSLTE EI + L
Sbjct: 240 SLLEDGLGDTIRVSLTEDAIHEIPVAKELV 269
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 125/186 (67%), Gaps = 5/186 (2%)
Query: 552 KIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLL 611
K G + R+L L E++ ++HH + +D+L+ + +VG L+DG+GD +
Sbjct: 480 KNGDLITVRKLSYQLRESDYPIVLVHHSE-----DKDELLYESSIHVGGSLLDGIGDVVR 534
Query: 612 LEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG 671
L + + SF++LQ R+R TKTEY+SCPSCGRT+FDLQ +A I++KT HL G
Sbjct: 535 LSYGDGEPEESLHLSFDILQATRLRLTKTEYISCPSCGRTMFDLQSTTAMIKQKTGHLKG 594
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
V IA+MGCIVNGPGEMADADFGYVG GK+ LY GK +VK+G++ +A D LI LI+++
Sbjct: 595 VKIAVMGCIVNGPGEMADADFGYVGAGIGKVHLYKGKEIVKKGVSETEAADLLIDLIREN 654
Query: 732 GRWAEP 737
G W +P
Sbjct: 655 GMWNDP 660
>gi|62185038|ref|YP_219823.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus S26/3]
gi|73621088|sp|Q5L669.1|ISPG_CHLAB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|62148105|emb|CAH63862.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila abortus S26/3]
Length = 606
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GS+H I+ Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVAQICALVEARCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KIYTDKHYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KS++GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSSVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESLLKHTTTYLNLPRKNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 102/146 (69%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ T GALL+DGLG+ ++L+ P +R+ +F LQ +R KTEY+SCP CGRT
Sbjct: 460 VAIATEFGALLLDGLGEAVILDLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRT 519
Query: 652 LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
LFDL E++ I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG G +DLYV T V
Sbjct: 520 LFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMVDLYVKHTCV 579
Query: 712 KRGIAMEQATDALIQLIKDHGRWAEP 737
K I MEQA D L+ L+K+HG W +P
Sbjct: 580 KAHIPMEQAEDELVLLLKEHGVWKDP 605
>gi|384916507|ref|ZP_10016664.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Methylacidiphilum fumariolicum SolV]
gi|384526107|emb|CCG92537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Methylacidiphilum fumariolicum SolV]
Length = 584
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 211/319 (66%), Gaps = 8/319 (2%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y + + RR R V VG+V +G HPI VQ+M T+DT D ++E M + D G +V
Sbjct: 4 YKRNFFEYTRRPVREVRVGSVGLGGPHPIVVQSMLTSDTMDTDSCLKEAMELVDCGCQIV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT ++A I+ L Q N+P+VADIHF P A+ A+ +KIR+NPGNF+DR
Sbjct: 64 RITAPTVKDASNLEFIRKGLDQLGCNVPIVADIHFKPEAAMEAAKWVEKIRINPGNFSDR 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F YTD EY +EL+ IE+ F PL+E C K A+RIGTNHGSLSDRIM+ YGD+P
Sbjct: 124 K-KFIIRSYTDQEYNEELRRIEQTFLPLLEFCSKRKIALRIGTNHGSLSDRIMNRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGV 313
GMVESA E+A +CRK FH+ +FSMKASNP +M+ AYRLLV + G W+YP+H+GV
Sbjct: 183 HGMVESALEYATVCRKYGFHDIVFSMKASNPRIMIAAYRLLVERLEKLGEDWNYPIHVGV 242
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG+GEDGR+KSAIGIG+LL DG+GDTIRVSLTE EI ++L + EL
Sbjct: 243 TEAGDGEDGRIKSAIGIGSLLADGIGDTIRVSLTESSVHEIPVAKKLIAV---VEELAAA 299
Query: 374 VAPFEE--KHRHYFDFQRR 390
AP + F++ RR
Sbjct: 300 PAPKVNGFSFKPSFEYNRR 318
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+I + ++G+LL DG+GD +L+ D + ++++LQG R KTEYV+CPSCGR
Sbjct: 437 LIASSLHIGSLLCDGIGDAILIRR-DPDPSYALVLAYSILQGAGNRIVKTEYVACPSCGR 495
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLFDLQ +A I++ T HL G+ IA+MGCIVNGPGEMADADFGYVGGAPGK++LYVGK
Sbjct: 496 TLFDLQSTTARIKKATGHLKGLKIAVMGCIVNGPGEMADADFGYVGGAPGKVNLYVGKKA 555
Query: 711 VKRGIAMEQATDALIQLIKDHGRW 734
V+ I +A +ALI+LIK G+W
Sbjct: 556 VRFNIPEAEAVEALIELIKKEGKW 579
>gi|373849717|ref|ZP_09592518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Opitutaceae
bacterium TAV5]
gi|372475882|gb|EHP35891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Opitutaceae
bacterium TAV5]
Length = 738
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 220/316 (69%), Gaps = 15/316 (4%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGS------EHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
+YC S + T+RR+T V VG+V IG ++P+R+Q+MTT DT+DVA TV + + +A
Sbjct: 2 RYCPSRYHTLRRETVEVQVGSVGIGGPGGIVGKNPVRIQSMTTTDTQDVAATVRQSIALA 61
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAECFDKIRV 187
+ G ++VR+T A A +I+ L + +IPLVADIHF PS A+ E +K+RV
Sbjct: 62 EVGCEIVRVTAPNVTAARALRDIRQQLTAAGFGHIPLVADIHFLPSAAMEAVEHVEKVRV 121
Query: 188 NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
NPGN+AD++ +F EY+D +Y++ELQ I + F+PLV + K GRA+RIGTNHGSLSDRI
Sbjct: 122 NPGNYADKK-KFAVTEYSDADYERELQRIYDAFTPLVLRAKALGRALRIGTNHGSLSDRI 180
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
M+ YGD+P GMVESA EF RIC +F + + SMKASNP VM+QAYRLLVA M Y
Sbjct: 181 MNRYGDTPLGMVESALEFLRICESHNFRDIVLSMKASNPKVMIQAYRLLVARMDQEDMHY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
PLHLGVTEAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI ++LA +A
Sbjct: 241 PLHLGVTEAGDGEDGRIKSAIGIGSLLYDGLGDTIRVSLTEDSVYEIPVAQKLA---AKA 297
Query: 368 AELQQ----GVAPFEE 379
L Q GV P E
Sbjct: 298 HALWQQGGAGVPPASE 313
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 108/149 (72%), Gaps = 5/149 (3%)
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT--SFNLLQGCRMRNTKTEYVSCPSC 648
++ A G+LL DG+GD + +E D D +R ++N+LQG R TKTEYV+CPSC
Sbjct: 584 LLDAAILTGSLLCDGVGDLVSVET---DPDPVRANKLAYNILQGAGARVTKTEYVACPSC 640
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLFDLQ + IR+KT HL GV +AIMGCIVNGPGEMADADFGYVGGAPGKI+LYVGK
Sbjct: 641 GRTLFDLQTTTQRIRQKTGHLKGVKLAIMGCIVNGPGEMADADFGYVGGAPGKINLYVGK 700
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
V+ I +A LI+LIK HG+W EP
Sbjct: 701 NCVQYNIPQAEADARLIELIKQHGKWMEP 729
>gi|333029633|ref|ZP_08457694.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprosuis DSM 18011]
gi|332740230|gb|EGJ70712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprosuis DSM 18011]
Length = 615
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 194/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G + +G +PIR+Q+MT T+D +V ++ RI D GAD VR+T QG +E
Sbjct: 8 RRGSSEVQIGAIPLGKNNPIRIQSMTNTSTQDTDTSVAQIKRIVDAGADYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI +L + NY +PLVAD+HF P VA AE +K+R+NPGN+ D QF+ L Y
Sbjct: 68 ATNLKEINIALRRSNYMVPLVADVHFNPKVADVAAEFAEKVRINPGNYVDPARQFKSLSY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ I + + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYNSELEKIRTRLTSFINICKENHTAIRIGVNHGSLSDRIMSHYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F N + S+KASN V+MVQ RLLVA + +PLHLGVTEAGEGEDGR+
Sbjct: 188 FLRICRDENFLNVVISIKASNTVIMVQTIRLLVATLEKENMFFPLHLGVTEAGEGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PEKEI ++L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEKEIPVAQKLVD 285
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCP 646
++ I + ++GAL++DG DGL L G + TSF++LQ R+R KTEY+SCP
Sbjct: 462 ENFQIKSAADMGALILDGFCDGLYLFNQGTLSHAQIDSTSFSILQAGRVRTVKTEYISCP 521
Query: 647 SCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
CGRT+F+L++ A ++ T+HL G+ I IMGCIVNGPGEMAD+D+GYVG GK+ LY
Sbjct: 522 GCGRTMFNLEKTIARVKASTNHLKGLKIGIMGCIVNGPGEMADSDYGYVGAGRGKVSLYK 581
Query: 707 GKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
K +++ I E+A D LI+LIK G + E
Sbjct: 582 KKECIEKNIPEEEAVDRLIELIKSQGDYKE 611
>gi|187735881|ref|YP_001877993.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Akkermansia muciniphila ATCC BAA-835]
gi|238054454|sp|B2UKT9.1|ISPG_AKKM8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|187425933|gb|ACD05212.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Akkermansia muciniphila ATCC BAA-835]
Length = 585
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 224/326 (68%), Gaps = 6/326 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+ YC S ++ RR TR VMVGNV +G +PIR+Q+M T+DT+D V+E + +A+ G
Sbjct: 2 QSSYCPSPYRYTRRVTREVMVGNVGVGGSNPIRIQSMLTSDTRDTDACVKEALELAEAGC 61
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
+++R+T Q K A I L ++PLVADIHF P A+ A+ +KIR+NPGNF
Sbjct: 62 EIIRLTAQTKAYAANLENIARELRAAGCHVPLVADIHFKPDAAMEAAKWVEKIRINPGNF 121
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D++ +FE EY+D EY++EL ++E F+PLV C+++GRA+RIG+NHGSLSDRI++ +G
Sbjct: 122 VDKK-KFEVREYSDAEYREELDRLKEEFTPLVLFCREHGRAMRIGSNHGSLSDRILNRFG 180
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLH 310
D+P GMVESA EFA+I R LD+H+ +FSMKASN VMV AYRLLV M G W+YP+H
Sbjct: 181 DTPEGMVESAIEFAQIARDLDYHSLVFSMKASNVKVMVAAYRLLVERMNALGPDWNYPIH 240
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAEL 370
LGVTEAG GEDGR+KSA+GIG+LL DG+GDT+RVSLTE +E+ RL+N + +E
Sbjct: 241 LGVTEAGGGEDGRIKSAVGIGSLLTDGIGDTLRVSLTEDAVREVPVAYRLSN-PFQPSER 299
Query: 371 QQGVAPFEEKHRHY--FDFQRRSGQL 394
F E Y F +R G L
Sbjct: 300 SDDPVSFPEPELSYDPLKFSKRQGGL 325
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
P + +D+ + A N+G+LL DG+GD +L++ D FN+LQ R T+ +
Sbjct: 430 PGSVSGEDVPLTAARNIGSLLCDGIGDAVLIQGE-SDPRLASFLGFNILQATGTRLTRAD 488
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
YVSCPSCGRTL+++QE +A IR+ T HL GV IA+MGCIVNGPGEMADADFGYVGGAP K
Sbjct: 489 YVSCPSCGRTLYNIQEATARIRKATEHLKGVKIAVMGCIVNGPGEMADADFGYVGGAPNK 548
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I+LYV T VK I E+A + L+ LIK++GRW +P
Sbjct: 549 INLYVKHTPVKFNIPQEEAVERLVDLIKEYGRWVDP 584
>gi|423227027|ref|ZP_17213491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392625493|gb|EIY19558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 613
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 193/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAGLRRDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K DF + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEDFTDVVISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMQEGLKNPVVFFQHYAEN-EAEDLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R+R +KTEY+SCP CGRTLFDLQ A ++ TSHL G+
Sbjct: 490 QGNLTHAVVDATAFGILQAGRIRTSKTEYISCPGCGRTLFDLQSTIARVKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|189219979|ref|YP_001940619.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Methylacidiphilum infernorum V4]
gi|189186837|gb|ACD84022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Methylacidiphilum infernorum V4]
Length = 606
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 206/294 (70%), Gaps = 6/294 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ R V VG V +G +P+ +Q+M T+DT D ++E + + + G +VRIT ++
Sbjct: 35 RRQAREVAVGKVKLGGGNPVAIQSMLTSDTMDTTACLKETLELVESGCQIVRITAPTVKD 94
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + ++PLVADIHF P A+ A +K+R+NPGNFADR+ +F Y
Sbjct: 95 ASNLEFIRRGLNDRGCDVPLVADIHFKPEAAMEAARWVEKVRINPGNFADRK-KFIIRSY 153
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ F PLVE C+K A+RIGTNHGSLSDRIM+ +GD+P+GMVESA E
Sbjct: 154 TDEEYNQELQRIEQAFLPLVELCRKRKIALRIGTNHGSLSDRIMNRFGDTPQGMVESALE 213
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGVTEAGEGEDG 322
+A +CRK DFH+F+FSMKASNP +M+ AYR L+ + G W+YP+H+GVTEAG+GEDG
Sbjct: 214 YAAVCRKHDFHDFVFSMKASNPRIMISAYRKLIQTLERLGEDWNYPVHVGVTEAGDGEDG 273
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAP 376
R+KSAIGIG+LL DG+GDTIRVSLTE EI +L ++ EL Q +P
Sbjct: 274 RIKSAIGIGSLLADGIGDTIRVSLTEKSVYEIPVAAKLLSV---VDELAQAPSP 324
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 137/233 (58%), Gaps = 11/233 (4%)
Query: 513 PEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNL- 571
P G V D S L DID+ + L D P I L+ + + +L
Sbjct: 373 PPGKDFVAEFPYDPSAIVELDLDDIDSILALRDKPARLVTIKDGCPYPPLYAFRALASLL 432
Query: 572 --NFPVI-HHIQFP---NGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEA-PGQDFDFLR 623
++P++ FP G+ R+ +I + ++G+LL DG+GD +LL P + +
Sbjct: 433 DPSWPILLKDTFFPLRDQGLGDREKNLIASSLHLGSLLCDGIGDAILLRRDPDPSYGLV- 491
Query: 624 DTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNG 683
S+ +LQ R KTEYV+CPSCGRTLFDLQ +A I++ T HL G+ IA+MGCIVNG
Sbjct: 492 -LSYAILQAAGNRTVKTEYVACPSCGRTLFDLQTTTARIKKATGHLKGIKIAVMGCIVNG 550
Query: 684 PGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PGEMADADFGYVGGAPGK++LYVGK V+ I +A DALI LIK G+W +
Sbjct: 551 PGEMADADFGYVGGAPGKVNLYVGKKPVRFNIPEAEAVDALIDLIKKEGKWMD 603
>gi|304383567|ref|ZP_07366027.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
marshii DSM 16973]
gi|304335377|gb|EFM01647.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
marshii DSM 16973]
Length = 620
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 197/295 (66%), Gaps = 1/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR + +G+ +G +PIRVQ+MTT DT D +V + RIAD G + VR+T QG R
Sbjct: 8 LRRTSSVTCIGDTPMGGAYPIRVQSMTTTDTNDTEASVAQAERIADAGGEYVRLTTQGTR 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ I L Y PL+AD+HF VA A K+R+NPGN+ D F+ L+
Sbjct: 68 EAENLKAIGMRLRADGYATPLIADVHFNARVADVAAHYAQKVRINPGNYVDPARTFKTLD 127
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY KE++ IE+ F P + CK++ AVRIG NHGSLSDRIMS YGD+P G+VES
Sbjct: 128 YTDEEYAKEIEKIEQRFVPFLHICKEHHTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCM 187
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC++ F + + S+KASN VVMV++ RLLV+EM G YPLHLGVTEAGEGEDGR
Sbjct: 188 EFLRICKREHFDDVVISIKASNTVVMVRSVRLLVSEMEKEGMHYPLHLGVTEAGEGEDGR 247
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPF 377
+KSA+GIG LL DG+GDTIRVSL+E PE EI RRL + RA PF
Sbjct: 248 IKSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARRLVEYITQRAGHSMIPCEPF 302
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIH-RDDLVIGAGTNVGALLVDGLGDGLLL- 612
R+ R L + + L PVI + + ++D + A + GAL++DG +GL L
Sbjct: 437 RLGHQRALVHEMMAHGLKNPVIFSEAYRHSKEEKEDFQLEAAADTGALMIDGFCNGLWLM 496
Query: 613 ---EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 669
P D L T+ +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TS +
Sbjct: 497 NDGTLPATD---LVATALGILQAGRLRTSKTEYISCPGCGRTLYDLRSTIARIKAATSDM 553
Query: 670 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY K V+R I E+A D L++LI+
Sbjct: 554 AGLKIGIMGCIVNGPGEMADADYGYVGAGPHRVSLYRKKECVQRSIPEEEAVDRLLELIR 613
>gi|182416438|ref|YP_001821504.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Opitutus
terrae PB90-1]
gi|177843652|gb|ACB77904.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Opitutus
terrae PB90-1]
Length = 677
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 204/292 (69%), Gaps = 2/292 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
YC S TVRR++ V VG+V +G ++PIR+Q+MTT+DT+DVA TV + + +A+ G ++
Sbjct: 2 SYCSSRFHTVRRRSLEVKVGSVGVGGDNPIRIQSMTTSDTQDVAATVAQAIALAEVGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
VR+T A EI+ + +PLVADIHF P+ A+ E +K+RVNPGN+A
Sbjct: 62 VRVTAPNIAAAQCLKEIRERFTAAGFGAVPLVADIHFLPAAAMEAIEHVEKVRVNPGNYA 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +F EYTD +Y++ELQ + E FSPLV + K GR++RIGTNHGSLSDRIM+ YGD
Sbjct: 122 DKK-KFAVREYTDTDYERELQRLHETFSPLVLRAKALGRSLRIGTNHGSLSDRIMNRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF RI F + SMKASNP VM+QAYRLLV M YPLHLGV
Sbjct: 181 TPLGMVESALEFLRIAESHGFDQLILSMKASNPKVMIQAYRLLVERMQQEAMHYPLHLGV 240
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGM 365
TEAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI + LA M
Sbjct: 241 TEAGDGEDGRIKSAIGIGSLLLDGLGDTIRVSLTEDSVYEIPVAQVLAAKAM 292
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDD-----LVIGAGTNVGALLVDGLGDGL 610
V + R+L E L L P+ + I RD+ ++ A GALL DG+GD +
Sbjct: 488 VGSYRQLSEALRHAGLRAPIWIRNTARSAI-RDEPSFLSKLLEASILTGALLCDGIGDLV 546
Query: 611 LLEAPGQDFDFLRDT--SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
LE + D +R T ++N+LQG R +KTE+V+CPSCGRTLFDLQ + IR +T H
Sbjct: 547 SLE---TEADPVRATKLAYNVLQGAGARTSKTEFVACPSCGRTLFDLQTTTQRIRAQTGH 603
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
L GV +AIMGCIVNGPGEMADADFGYVGGAPGKI+LYVGK V I +A LI LI
Sbjct: 604 LKGVKLAIMGCIVNGPGEMADADFGYVGGAPGKINLYVGKQCVAYNIPQAEADARLIALI 663
Query: 729 KDHGRWAEP 737
K+HG+W +P
Sbjct: 664 KEHGKWVDP 672
>gi|282881277|ref|ZP_06289963.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
timonensis CRIS 5C-B1]
gi|281304867|gb|EFA96941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
timonensis CRIS 5C-B1]
Length = 605
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 207/308 (67%), Gaps = 5/308 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V VGN+ IG + PIR+Q+MTT DT D VE+ RI G +LVR+T QG+RE
Sbjct: 9 RRESSVVHVGNITIGGDSPIRIQSMTTTDTNDTEACVEQAERIIQAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L K ++ PLVAD+HF +VA AE +K+R+NPGN+ D +F Q+ Y
Sbjct: 69 AENLKNIHAALRAKGHHTPLVADVHFNANVADVAAEYTEKVRINPGNYVDPARKFIQIAY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELKKIEDRFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F + + S+K+SN +VMVQ+ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKEQFEDVVISIKSSNTIVMVQSVRLLVDAMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEE-KHR 382
KSA+GIG LL DG+GDTIRVSL+E PE EI + + N + RA L + P E+ K+
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKHIVNYITKRAGHL---LIPAEQNKNF 305
Query: 383 HYFDFQRR 390
Y RR
Sbjct: 306 SYLHPTRR 313
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + N ++ PV+ Q ++ + A ++GAL+VDG DG+ L
Sbjct: 423 RLGEQRALLHEIMNNGVDNPVVI-AQMYRHDEKNAFQLDAAVDMGALMVDGFVDGIWLMN 481
Query: 615 PGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
GQ L +T+FN+LQ R+R +KTEY+SCP CGRTL+DLQ+ A+I++ T + G+
Sbjct: 482 DGQLPHSVLEETAFNILQAGRLRMSKTEYISCPGCGRTLYDLQDTIAQIKDATKEMKGLK 541
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG PGK+ LY +T VK+ I E+A + L++LI D
Sbjct: 542 IGIMGCIVNGPGEMADADYGYVGAGPGKVSLYRKQTCVKKNIPTEEAVEQLLKLIHD 598
>gi|333384022|ref|ZP_08475667.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
gadei ATCC BAA-286]
gi|332826980|gb|EGJ99774.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
gadei ATCC BAA-286]
Length = 615
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/276 (52%), Positives = 191/276 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +G+ +G +P+R+Q+MT +T D + E+V+RI GAD VR+T QG RE
Sbjct: 8 RRLSSETRIGDTPLGGGNPVRIQSMTNTNTNDTEASAEQVIRIVKAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK+ + + YN PL+ADIHF P A A+ +K+R+NPGNF DR FE EY
Sbjct: 68 AENLRNIKDVVRTQGYNTPLIADIHFNPRAAEAAAKIVEKVRINPGNFVDRVKTFETFEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I PL+ CK++ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRAKLIPLLNICKEHKTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F IC +F + + SMK SN VVM +A RLL+ M G ++PLHLGVTEAG+GEDGR+
Sbjct: 188 FLHICIAEEFRDIVISMKTSNTVVMSKAVRLLITRMEKEGLNFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE E+ R+L
Sbjct: 248 KSAVGIGSLLSDGIGDTIRVSLSEDPEYEVPVARKL 283
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 135/230 (58%), Gaps = 19/230 (8%)
Query: 522 LRGDE--------SYEELE-----ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSE 568
+RGD+ SY EL+ +LK + I+ + + I V R L
Sbjct: 389 IRGDDAAIKFLRLSYPELDDNIITLLKADKSIAII----LSTNHINGVGEQRAFIHTLMN 444
Query: 569 NNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSF 627
NN + PVI + ++ +DL I A + G L +DG G+G++LE G + F
Sbjct: 445 NNCDTPVIPNRRYEEN-ETEDLQIKAAADFGTLYLDGFGNGIMLENQGSISLKNIDAYMF 503
Query: 628 NLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEM 687
+LQ R+R +KTEY+SCPSCGRTLFDLQ A ++ TSHL + I +MGCIVNGPGEM
Sbjct: 504 GILQASRIRTSKTEYISCPSCGRTLFDLQTTVALVKGATSHLKHLKIGVMGCIVNGPGEM 563
Query: 688 ADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
ADAD+GYVG GKI LY K ++++ IA E+A + L+QLIKD+G W EP
Sbjct: 564 ADADYGYVGAEKGKISLYKRKNLIEKNIASEEAVERLVQLIKDNGDWMEP 613
>gi|374386312|ref|ZP_09643812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
laneus YIT 12061]
gi|373224241|gb|EHP46581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
laneus YIT 12061]
Length = 619
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/280 (52%), Positives = 200/280 (71%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR+T V +G V + SE P+ VQ+M T D VE+ +RI + G LVRIT G +
Sbjct: 1 MRRETIAVQIGEVVLSSEQPVLVQSMLNTSTLDTEACVEQSIRIIEAGGQLVRITAPGVK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ I++ L +++Y +PL ADIHF+P+ AL A +K+R+NPGNF D+RA F+ L
Sbjct: 61 EAENLKNIRDILRERSYTVPLSADIHFSPAAALVAARYVEKVRINPGNFVDKRATFQNLV 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT++EY ELQ ++ F+ +++C+++ AVRIGTNHGSLSDRIMS YG++P GMVE+
Sbjct: 121 YTEEEYAAELQQLKCKFTEFLDECRRHHTAVRIGTNHGSLSDRIMSRYGNTPAGMVEATM 180
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ RIC+++ F + S+K+S+ +MV+A RLLV EM G YPLHLGVTEAGEGEDGR
Sbjct: 181 EYLRICQEIGFDQVVISLKSSDCRIMVEAVRLLVKEMEKAGMKYPLHLGVTEAGEGEDGR 240
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
++SA+GIG LL +G+GDTIRVSLTE PE+EI R L L
Sbjct: 241 IRSAVGIGCLLNEGIGDTIRVSLTEAPEQEIPVARTLIGL 280
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
R L I A T G L +D + GL + A + + F + S N+LQ +R KTE+VSC
Sbjct: 468 RAALQIAAHT--GGLFIDRIPYGLWITASQEENIAFTLNLSRNILQSAGLRRYKTEFVSC 525
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL++L+E A+++ SHL + IAIMGCIVNGPGEM DAD+GYVG GK++LY
Sbjct: 526 PGCGRTLYNLEEAVAKVKGAFSHLSKLKIAIMGCIVNGPGEMGDADYGYVGAGNGKVNLY 585
Query: 706 VGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
G+ +V+ + +QA AL QLI+++G W +
Sbjct: 586 KGRKMVRAAVPEQQAIAALEQLIRENGDWCD 616
>gi|423251911|ref|ZP_17232919.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T00C08]
gi|423252775|ref|ZP_17233706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T12C07]
gi|392648787|gb|EIY42474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T00C08]
gi|392659538|gb|EIY53157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T12C07]
Length = 626
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/278 (55%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINISLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL + AG ++GAL+ DGL DG+ L
Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+
Sbjct: 490 QGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|317478389|ref|ZP_07937552.1| GcpE protein [Bacteroides sp. 4_1_36]
gi|316905425|gb|EFV27216.1| GcpE protein [Bacteroides sp. 4_1_36]
Length = 622
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQTKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINIGLRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVQENFTDVVISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + + L PV+ + ++L I A ++GAL+ DGL DG+LL
Sbjct: 438 RLGEQRALVHQMMKEGLKNPVVFFEHYAES-ELENLQIKAAADMGALIFDGLCDGILLFN 496
Query: 615 PGQDFD--FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G+ + T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T HL G+
Sbjct: 497 QGETISGKVVDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKAATGHLKGL 556
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 557 KIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKSNG 616
Query: 733 RWAE 736
+AE
Sbjct: 617 DYAE 620
>gi|429725762|ref|ZP_19260579.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 473 str. F0040]
gi|429148899|gb|EKX91895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 473 str. F0040]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 207/305 (67%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
R + V VGN IG +P+R+Q+MTT T D +VE+ +RI + GADLVR+T QG REA
Sbjct: 9 RSSHAVKVGNTIIGDGNPLRLQSMTTTLTTDTEASVEQCIRIIEAGADLVRLTTQGLREA 68
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
+ I+ L ++ Y+ PLVAD+HF P VA A +K+R+NPGN+ D F+ +EYT
Sbjct: 69 ENLRNIRAELDRRGYHTPLVADVHFNPKVADLAATIIEKVRINPGNYVDPARTFKSVEYT 128
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
D+EY ELQ +E F L+E C++ G A+RIG NHGSLSDRIM +YGD+P G+VES EF
Sbjct: 129 DEEYAAELQRLETRFKKLLEICRENGTAIRIGVNHGSLSDRIMCHYGDTPAGIVESCMEF 188
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
RIC + +F + + S+KASN VVMVQ+ RLLV M G +PLHLGVTEAGEGEDGR+K
Sbjct: 189 LRICMRENFFDVVISIKASNTVVMVQSMRLLVDAMKREGMSFPLHLGVTEAGEGEDGRIK 248
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYF 385
SA+GIG LL DG+GDTIRVSL+E PE+EI +LA+ + + + ++
Sbjct: 249 SAVGIGALLADGIGDTIRVSLSEAPEQEIPVAYKLASYVLESRSGHAHIPALPCAEFNWL 308
Query: 386 DFQRR 390
+ QRR
Sbjct: 309 EPQRR 313
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R R L + L PVI Q+ + + ++D I A ++G L++DGL DG++L +
Sbjct: 437 RAGELRALVHEMWRERLTNPVIFCQQYGDTV-KEDFQIKAAADMGLLMMDGLTDGVMLAS 495
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
+ D +T+F +LQ R+R TKTEY+SCP CGRTL+DLQE A I+ TSHL G+ +
Sbjct: 496 RLAERD---ETAFGVLQAGRLRQTKTEYISCPGCGRTLYDLQETIARIKASTSHLKGLKL 552
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
IMGCIVNGPGEMADAD+GYVG PGK+ LY GK V+R I +A D L+ LI+
Sbjct: 553 GIMGCIVNGPGEMADADYGYVGAGPGKVSLYRGKVCVERNIPTAEAVDRLLSLIE 607
>gi|357060766|ref|ZP_09121530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alloprevotella rava F0323]
gi|355375599|gb|EHG22882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alloprevotella rava F0323]
Length = 632
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/283 (54%), Positives = 195/283 (68%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
R++ V VGN +G ++PIR+Q+MTT T D G V ++ I G D VR+T QG REA
Sbjct: 22 RESHEVSVGNKPLGGDNPIRLQSMTTAATTDTEGCVRQIKAIVGAGGDYVRLTTQGTREA 81
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
+ IK+ L + Y PLVADIHF P+VA A +K+R+NPGN+ D F LEYT
Sbjct: 82 ENLRNIKDELTRLGYTTPLVADIHFNPNVADVAATIVEKVRINPGNYIDPARTFRHLEYT 141
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
D+EY EL+ +E F L++ C+ A+RIG NHGSLSDRIMS YGD+P G+VES EF
Sbjct: 142 DEEYADELKRLEARFHQLLDICRANHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCMEF 201
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+C+K DF + + S+KASN VVMV++ RLL + M G D+PLHLGVTEAGEGEDGR+K
Sbjct: 202 LRVCQKEDFKDVVISIKASNTVVMVRSMRLLCSIMQAEGMDFPLHLGVTEAGEGEDGRIK 261
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAA 368
SA GIG LL DG+GDTIRVSL+E PE EI +LA+ +R A
Sbjct: 262 SAAGIGALLADGIGDTIRVSLSEAPENEIPVAYKLASHVVRRA 304
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Query: 529 EELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGI-HR 587
EE+++ + M++ +++++G ++A L + NL PV+ Q + +
Sbjct: 421 EEVKVCLRLHPEMVVIAQSNHQNRLGELRA---LVHEMWTENLQNPVVFFEQSAHSADEK 477
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLL------EAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
+D I ++GALL DGL DG+ L +A + + T+F +LQ R R T+TE
Sbjct: 478 EDFQIETAADLGALLFDGLTDGIFLFNNYQGKAQRMTYADIDATAFGILQATRQRTTRTE 537
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
Y+SCP CGRTL++LQ A I+ TSHL G+ I IMGCIVNGPGEMADAD+GYVG A GK
Sbjct: 538 YISCPGCGRTLYNLQTTIARIKAATSHLTGLKIGIMGCIVNGPGEMADADYGYVGAARGK 597
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIK 729
+ LY GK V++ IA E+A D L+ LI+
Sbjct: 598 VSLYRGKVCVEKNIAEEEAVDKLLALIE 625
>gi|383121606|ref|ZP_09942313.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_6]
gi|251837932|gb|EES66021.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_6]
Length = 613
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKEIHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLENPVVFFQHYAED-EAEDLQIKSAVDMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606
>gi|29347927|ref|NP_811430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
thetaiotaomicron VPI-5482]
gi|50401027|sp|Q8A4T0.1|ISPG_BACTN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29339829|gb|AAO77624.1| GcpE, 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides thetaiotaomicron VPI-5482]
gi|290770228|gb|ADD61985.1| putative protein [uncultured organism]
Length = 613
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLENPVVFFQHYAED-EAEDLQIKSAVDMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606
>gi|319900818|ref|YP_004160546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
helcogenes P 36-108]
gi|319415849|gb|ADV42960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
helcogenes P 36-108]
Length = 624
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 193/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RIAD G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGFNPIRIQSMTNTATQDTEACVAQAKRIADAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + Y +PL+ADIHF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAALRKDGYMVPLIADIHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYTQELQKIRDRFIPFLYICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + DF + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEQDFKDVVISIKASNTVVMVKTVRLLAAVMEKEGMHFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 114/188 (60%), Gaps = 7/188 (3%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + + L P++ + ++L I + ++GAL+ DGL DG+LL
Sbjct: 438 RLGEQRALVHQMMQERLKNPIVFFEHYSEE-EAENLQIKSAADIGALIFDGLCDGILLYN 496
Query: 615 PGQDFD------FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
G D + T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T H
Sbjct: 497 QGGKSDKAISDETIDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKSATGH 556
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
L G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LI
Sbjct: 557 LKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELI 616
Query: 729 KDHGRWAE 736
K +G + E
Sbjct: 617 KANGDYTE 624
>gi|298387830|ref|ZP_06997380.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_14]
gi|298259435|gb|EFI02309.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_14]
Length = 613
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLENPVVFFQHYAED-EAEDLQIKSAVDMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606
>gi|340347180|ref|ZP_08670292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|433652380|ref|YP_007278759.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|339609750|gb|EGQ14613.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|433302913|gb|AGB28729.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
dentalis DSM 3688]
Length = 663
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 155/287 (54%), Positives = 197/287 (68%), Gaps = 1/287 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG + +G +P+R+Q+MTT DT D +V + RI G +LVR+T QG RE
Sbjct: 9 RRETTEVHVGALGMGGGNPVRIQSMTTTDTNDTEASVAQSERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + ++ PLVAD+HF P+VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINAGIRADGFSTPLVADVHFNPNVADVAARYAEKVRVNPGNYVDPARRFVKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEARFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ F + + S+KASN VVMV++ RLLVA M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICRREQFADVVISIKASNTVVMVRSVRLLVARMEAEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL 370
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA+ +G +A L
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLADYVGRKAGHL 295
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
+++ + A ++GAL++DGL DG+ L G + DT+F +LQ R+R +KTEY+SC
Sbjct: 513 KEEFQLRAAADMGALMIDGLTDGIWLMNEGSVGTADITDTAFGILQAARLRTSKTEYISC 572
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL+DL+E A IR+ T+ + G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY
Sbjct: 573 PGCGRTLYDLRETIARIRQATTAMKGLKIGIMGCIVNGPGEMADADYGYVGAGPHRVSLY 632
Query: 706 VGKTVVKRGIAMEQATDALIQLIKDHGR 733
+ V++ I E+A D L+QLI++ R
Sbjct: 633 RRQECVEKNIPEEEAVDRLLQLIENDRR 660
>gi|380692514|ref|ZP_09857373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
faecis MAJ27]
Length = 613
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNSIRVQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 111/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + + +DL I + ++GAL+ DGL DGL L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-NAEDLQIKSAADMGALIFDGLCDGLFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D +F +LQ R+R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGSLSHAVVDGIAFGILQAGRLRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606
>gi|265767410|ref|ZP_06095076.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_16]
gi|383119673|ref|ZP_09940411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_2_5]
gi|251944715|gb|EES85190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_2_5]
gi|263252715|gb|EEZ24227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_16]
Length = 626
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL + AG ++GAL+ DGL DG+ L
Sbjct: 431 RVGEHRALAHQLAVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+
Sbjct: 490 QGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|300727466|ref|ZP_07060858.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bryantii B14]
gi|299775270|gb|EFI71870.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bryantii B14]
Length = 625
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 210/321 (65%), Gaps = 5/321 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG V IG +P+R+Q+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 9 RRQTSNVHVGAVDIGGNNPVRIQSMTTTNTNDTEACVKQAEDIIKAGGELVRLTTQGSRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PLVAD+HF P VA A + +R+NPGN+ D +F Q+EY
Sbjct: 69 AENLKNINAGLRNDGHQTPLVADVHFNPHVADVAALYAEGVRINPGNYVDPARKFIQVEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY++EL+ IEE F P + CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYEQELKKIEERFVPFLNICKEHHTAIRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K +F N + S+K+SN VVMVQ+ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKENFSNVVISIKSSNTVVMVQSVRLLVDTMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFE-EKHR 382
KSA+GIG LL DG+GDTIRVSL+E P EI + L + +G ++ + + P E K
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVAKHLVDYIGKKSGHI---IVPGEANKDF 305
Query: 383 HYFDFQRRSGQLPIQKEGEEV 403
++ RR+ Q I G V
Sbjct: 306 NWISPTRRNTQPVINIGGNHV 326
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L + + L+ PVI + + + D + A ++GAL++DGL DG+ L
Sbjct: 443 RLACQRALVHEMMNHGLHNPVIFAQMYEHTQAQKSDFQLEAAADMGALMMDGLVDGIWLM 502
Query: 614 APG----QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL 669
G QD D DT+FN+LQ R+R TKTEY+SCP CGRTL+DL+E A+IRE T +
Sbjct: 503 NNGNLAQQDVD---DTAFNILQAGRLRTTKTEYISCPGCGRTLYDLRETIAKIREATKEM 559
Query: 670 PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
G+ I IMGCIVNGPGEMADAD+GYVG ++ LY + +++ I E A + L++LI+
Sbjct: 560 KGLKIGIMGCIVNGPGEMADADYGYVGAGVNRVSLYRKQECIEKNIPEEFAVEHLLKLIE 619
>gi|375360419|ref|YP_005113191.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
638R]
gi|301165100|emb|CBW24668.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
638R]
Length = 626
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL + AG ++GAL+ DGL DG+ L
Sbjct: 431 RVGEHRALAHQLAVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+
Sbjct: 490 QGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|427388195|ref|ZP_18884078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
oleiciplenus YIT 12058]
gi|425724778|gb|EKU87652.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
oleiciplenus YIT 12058]
Length = 615
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 192/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D + +I D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEACAAQAKQIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAALRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIRDRFVPFLNICKENYTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLAAVMEKEGMHFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMKEGLKNPVVFFQHYMEN-EAEDLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R+R +KTE++SCP CGRTLFDLQ A ++ TSHL G+
Sbjct: 490 QGSLSHAVVDATAFGILQAGRVRTSKTEFISCPGCGRTLFDLQSTIARVKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKVSLYKKKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YTE 612
>gi|384449366|ref|YP_005661968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae LPCoLN]
gi|269303250|gb|ACZ33350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae LPCoLN]
Length = 613
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 207/302 (68%), Gaps = 1/302 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +GN+ IGS+H I+ Q+MTT T D+ TVE++ +A+ D+VR+TVQG +E
Sbjct: 12 RRKTHTVRIGNLYIGSDHSIKTQSMTTTSTTDIDSTVEQIYALAEHNCDIVRVTVQGIKE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE- 203
A AC +IK L+ NIPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F+ +
Sbjct: 72 AQACEKIKERLIALGLNIPLVADIHFFPQAAMLVADFADKVRINPGNYIDKRNMFKGTKI 131
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT+ Y + L +EE F+PLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV SA
Sbjct: 132 YTEASYAQSLLRLEEKFAPLVEKCKRLGKAMRIGVNHGSLSERIMQKYGDTIEGMVASAI 191
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ +C KL++ + +FSMK+SNP +MV AYR L ++ GW YPLHLGVTEAG G DG
Sbjct: 192 EYIAVCEKLNYRDVVFSMKSSNPKIMVTAYRQLAKDLDARGWLYPLHLGVTEAGMGMDGI 251
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
+KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF +H
Sbjct: 252 IKSAVGIGTLLAEGLGDTIRCSLTGCPTTEIPVCDSLLRHTKIYLDLPEKKNPFSLQHSE 311
Query: 384 YF 385
F
Sbjct: 312 NF 313
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+ +R FE ++ F N +++ I T GALL+DGLG+ ++L+ P
Sbjct: 428 IHTSRDFFEKQGHQGKPTKLVFSRDFDN---KEEAAISIATEFGALLLDGLGEAVVLDLP 484
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+ + +F LQ +R KTEY+SCP CGRTLFDL+E++ IR++T HLPG+ IA
Sbjct: 485 NLPLQDVLEIAFGTLQNAGVRLVKTEYISCPMCGRTLFDLEEVTTRIRKRTQHLPGLKIA 544
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFG+VG G IDLYV T VK I ME A + LI+L+++HG W
Sbjct: 545 IMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELIRLLQEHGVWK 604
Query: 736 EP 737
+P
Sbjct: 605 DP 606
>gi|301312366|ref|ZP_07218283.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 20_3]
gi|423337236|ref|ZP_17314980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL09T03C24]
gi|300829788|gb|EFK60441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 20_3]
gi|409238424|gb|EKN31217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL09T03C24]
Length = 611
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L +
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVD 285
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
LEILK D T+++ + + +G +AA L + PV+ H F + L
Sbjct: 411 LEILK-ADKTVVVLLSTHHRNGVGSQRAA---MHKLLMAGCDVPVVLHRDFRE-TDVELL 465
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+ + + G LL+DG GDGL+L G + F +LQ R R +KTEY+SCPSCGR
Sbjct: 466 QLKSAADFGTLLLDGFGDGLMLHNEGCEAVVSDRCMFGILQATRTRISKTEYISCPSCGR 525
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TL+DLQ A I+E TSHL G+ I IMGCIVNGPGEMADAD+GYVG G+I LY GK
Sbjct: 526 TLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGQISLYKGKEC 585
Query: 711 VKRGIAMEQATDALIQLIKDHGRW 734
V + I E A + L+QLIK++G W
Sbjct: 586 VLKNIPEEDAVERLVQLIKENGDW 609
>gi|359404901|ref|ZP_09197706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
stercorea DSM 18206]
gi|357559851|gb|EHJ41280.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
stercorea DSM 18206]
Length = 618
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG++ IG + PIRVQ+MTT +T D V + RI G +LVR+T QG+RE
Sbjct: 9 RRSTSPVQVGDIQIGGDAPIRVQSMTTTNTNDTEACVAQAERIIKAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF +VA A +K+RVNPGN+ D F+++EY
Sbjct: 69 AENLQNINAQLRADGYQTPLVADVHFNANVADVAALYAEKVRVNPGNYVDPARVFKKIEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY EL+ +E+ F P + C+++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDAEYADELKKLEDRFVPFLNICREHHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN V+MV+ RLL++EM YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKEQFDNVVISIKASNTVIMVRTVRLLISEMDQADMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R L +
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVD 286
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L L N L PV+ + + + DL + A ++GAL++DGL DGL L
Sbjct: 436 RLGEQRALAHELWSNGLFNPVVFAQMYGHSSAEKADLQLEAAADMGALMIDGLTDGLWLM 495
Query: 614 APGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G + DT+F +LQ R+R +KTEY+SCP CGRTL+DL+ A+I+ T+H+ G+
Sbjct: 496 NNGDIAVRDITDTAFAILQAARLRTSKTEYISCPGCGRTLYDLRSTIAKIKAATAHMKGL 555
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG PGKI LY K V++ I +A + L++ I++
Sbjct: 556 KIGIMGCIVNGPGEMADADYGYVGAGPGKISLYKQKMCVEKAIPESEAVEHLLRFIEE 613
>gi|160883640|ref|ZP_02064643.1| hypothetical protein BACOVA_01612 [Bacteroides ovatus ATCC 8483]
gi|423291668|ref|ZP_17270515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL02T12C04]
gi|423298337|ref|ZP_17276395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL03T12C18]
gi|156111053|gb|EDO12798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus ATCC 8483]
gi|392662791|gb|EIY56347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL02T12C04]
gi|392663249|gb|EIY56800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL03T12C18]
Length = 613
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC DF + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEDFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYSED-DAENLQIKSAVDMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKVATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLKFIR 605
>gi|423282863|ref|ZP_17261748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 615]
gi|404581472|gb|EKA86170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 615]
Length = 626
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL + AG ++GAL+ DGL DG+ L
Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+
Sbjct: 490 QGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|325299093|ref|YP_004259010.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salanitronis DSM 18170]
gi|324318646|gb|ADY36537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salanitronis DSM 18170]
Length = 612
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIRVQ+MT T D VE+ +RI + G + VR+T QG RE
Sbjct: 8 RRQASEVYVGGTPMGGTNPIRVQSMTNTPTTDTEACVEQAIRIIEAGGEYVRLTTQGTRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L K Y PL+AD+HF P VA A + +R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSKGYGTPLIADVHFNPKVAEVAALYAEGVRINPGNYTDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KE+Q I E P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAKEIQKIRERLVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN V+MV+ RLLVA+M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEQFTDVVISIKASNTVIMVKTVRLLVAQMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSLTE PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLTEAPEAEIPVARKLVD 285
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L P++ Q+ +D + A T++GALL+DGL DG+LL
Sbjct: 431 RLGEFRGLAHQLMASGLKNPLVF-FQYYKETCLEDFQLKAATDMGALLIDGLCDGILLYN 489
Query: 615 PGQDFDFLR--DTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G L+ +T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 490 DGDAISDLKLDETAFGILQAGRLRTSKTEYISCPGCGRTLYDLEATIARIKTATSHLKGL 549
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I EQA + L++LI
Sbjct: 550 KIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEQAVEKLLELI 605
>gi|423221278|ref|ZP_17207771.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae CL03T12C61]
gi|392622148|gb|EIY16286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae CL03T12C61]
Length = 610
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D V++ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVDQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-E 613
R+ R L L L PV+ + + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-NAEDLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QAGLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A D L+ LI+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVDKLLSLIQ 605
>gi|336416953|ref|ZP_08597284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus 3_8_47FAA]
gi|335936997|gb|EGM98907.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus 3_8_47FAA]
Length = 613
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/319 (49%), Positives = 205/319 (64%), Gaps = 1/319 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + + + + E +Y
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVDYVLLRQD-HPYIPGLEAPEFNY 306
Query: 385 FDFQRRSGQLPIQKEGEEV 403
+RR + GE V
Sbjct: 307 LSLERRKTKAVRNIGGEHV 325
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYSED-DAENLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|262409208|ref|ZP_06085752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_22]
gi|294647418|ref|ZP_06725006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CC 2a]
gi|294809809|ref|ZP_06768491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens SD CC 1b]
gi|345509881|ref|ZP_08789467.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D1]
gi|229446039|gb|EEO51830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D1]
gi|262352955|gb|EEZ02051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_22]
gi|292637245|gb|EFF55675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CC 2a]
gi|294442995|gb|EFG11780.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens SD CC 1b]
gi|295085289|emb|CBK66812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens XB1A]
Length = 614
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 432 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-DAENLQIKSAADMGALIFDGLCDGIFLFN 490
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 491 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 606
>gi|336406359|ref|ZP_08587015.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_30]
gi|335935021|gb|EGM97002.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_30]
Length = 614
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 432 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-DAENLQIKSAADMGALIFDGLCDGIFLFN 490
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 491 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 606
>gi|193215231|ref|YP_001996430.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chloroherpeton thalassium ATCC 35110]
gi|193088708|gb|ACF13983.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chloroherpeton thalassium ATCC 35110]
Length = 687
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/280 (51%), Positives = 202/280 (72%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y +S++ RRKT V GN+ +G PIRV++MTT DT + VE+ R+ + +++
Sbjct: 4 YTKSVYSYRRRKTVEVKFGNIKLGGMQPIRVESMTTADTMNTEAVVEQSRRLYEADCEII 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT + A+ I++ L + PLVADIHF P+ A++ E + +R+NPGN+AD+
Sbjct: 64 RITAPSIKSAENLKNIRDILRKDGIQTPLVADIHFTPNAAMKAVEFVENVRINPGNYADK 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F +++TD EYQ+EL+ + + F PLV K K+YG ++RIGTNHGSLSDRIMS YGD+P
Sbjct: 124 K-RFNHIDFTDAEYQEELERLHDEFKPLVLKAKEYGVSMRIGTNHGSLSDRIMSRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVESA EFAR+C D+++ LFSMK+SN VM++AYRLL A+ + YPLHLGVT
Sbjct: 183 LGMVESALEFARVCEMYDYYDVLFSMKSSNVRVMIEAYRLLAAQADRELKYAYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KS++GIG LL+DGLGDTIRVSLTE P KE+
Sbjct: 243 EAGDGDEGRIKSSMGIGALLEDGLGDTIRVSLTEDPVKEV 282
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 122/188 (64%), Gaps = 7/188 (3%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
V A R L +E+ LNFPV+ R +++ + G L DG+GD + L
Sbjct: 501 VFATRYLVRLFNESELNFPVMLRYNGKGISERQHVLVDSSIQAGTPLADGIGDAISLVTD 560
Query: 616 ---GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
++ +F ++++LQ R+R +KTE++SCP CGRTLFDL+E + +I+ +T+HL G+
Sbjct: 561 LTHKEELNF----AYSILQAARIRVSKTEFISCPGCGRTLFDLEEATGKIKARTAHLKGL 616
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
I IMGCIVNGPGEMADADFGYVG G+I LYVGK V+R I ++A D L++LIK+HG
Sbjct: 617 KIGIMGCIVNGPGEMADADFGYVGTGHGEISLYVGKECVQRHIPEDEAVDKLVELIKEHG 676
Query: 733 RWAEPPAE 740
+W EP E
Sbjct: 677 KWQEPKEE 684
>gi|423216348|ref|ZP_17202872.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens CL03T12C04]
gi|392690881|gb|EIY84134.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens CL03T12C04]
Length = 614
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 432 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-DAENLQIKSAADMGALIFDGLCDGIFLFN 490
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 491 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 606
>gi|237722861|ref|ZP_04553342.1| GcpE [Bacteroides sp. 2_2_4]
gi|229447383|gb|EEO53174.1| GcpE [Bacteroides sp. 2_2_4]
Length = 613
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYSED-DAENLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|345882106|ref|ZP_08833613.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oulorum F0390]
gi|343918261|gb|EGV29029.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oulorum F0390]
Length = 615
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 195/283 (68%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I + RR+T TV +G++ +GS PIRVQ+MTT +T D V + I D G +LVR+T
Sbjct: 4 IFQYKRRETSTVHIGDLEMGSAFPIRVQSMTTTNTNDTEACVHQAREIIDAGGELVRLTT 63
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG REA+ I + L Y+ PLVAD+HF P+VA + +K+R+NPGN+ D +F
Sbjct: 64 QGIREAENLKNIHDGLHALGYHTPLVADVHFNPNVADVASRFTEKVRINPGNYVDPARKF 123
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+D+EY EL+ IE F P + CK+ A+RIG NHGSLSDRI ++YGD+P G+V
Sbjct: 124 ILQEYSDEEYAGELKKIEARFVPFLNLCKENHTAIRIGVNHGSLSDRIRNHYGDTPEGIV 183
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ES EF RIC++ FH+ + S+KASN VVMV++ RLLVAEM YPLHLGVTEAGEG
Sbjct: 184 ESCMEFLRICQREAFHDVVISIKASNTVVMVRSVRLLVAEMEKENMHYPLHLGVTEAGEG 243
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
EDGR+KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 244 EDGRIKSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 286
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
+ + + A ++GAL++DGL DG+ L G + DT+F +LQ R+R +KTEY+SC
Sbjct: 463 KSEFQLEAAADLGALMIDGLTDGIWLMNDGDLSQQVITDTAFGILQAARLRTSKTEYISC 522
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL+DL+E A IRE T + G+ I IMGCIVNGPGEMADAD+GYVG ++ LY
Sbjct: 523 PGCGRTLYDLRETIARIREATKDMKGLKIGIMGCIVNGPGEMADADYGYVGAGVNRVSLY 582
Query: 706 VGKTVVKRGIAMEQATDALIQLIK 729
+ V++ I E A D L+ LI+
Sbjct: 583 RKQVCVEKNIPQEVAVDHLLALIR 606
>gi|153806077|ref|ZP_01958745.1| hypothetical protein BACCAC_00328 [Bacteroides caccae ATCC 43185]
gi|149130754|gb|EDM21960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae ATCC 43185]
Length = 610
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D V++ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVDQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-E 613
R+ R L L L PV+ + + +DL I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-NAEDLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGGLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A D L+ LI+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVDKLLSLIQ 605
>gi|383114021|ref|ZP_09934787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D2]
gi|313697285|gb|EFS34120.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D2]
Length = 613
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYSED-DAENLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|293373438|ref|ZP_06619793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CMC 3f]
gi|292631576|gb|EFF50199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CMC 3f]
Length = 613
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLLTEGLQNPVVFFQHYSED-DAENLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|299147570|ref|ZP_07040634.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_23]
gi|298514357|gb|EFI38242.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_23]
Length = 613
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQRYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + ++L I + ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYSED-DAENLQIKSAADMGALIFDGLCDGIFLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|150003981|ref|YP_001298725.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus ATCC 8482]
gi|166216867|sp|A6L089.1|ISPG_BACV8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|149932405|gb|ABR39103.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides vulgatus ATCC 8482]
Length = 614
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFQKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKAEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + DT+ F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGPLSHIVVDTTAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKTATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|423302952|ref|ZP_17280973.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii CL09T03C10]
gi|408470281|gb|EKJ88816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii CL09T03C10]
Length = 612
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQEYMVPLVADVHFNPKVADVAARYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PV+ + +DL I A ++GAL+ DGL DG+ +
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-DAEDLQIKAAADMGALIFDGLCDGIFIFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGNLSHAVIDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLTGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606
>gi|424665482|ref|ZP_18102518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 616]
gi|404574726|gb|EKA79474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 616]
Length = 655
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + +R+T QG +E
Sbjct: 49 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYIRLTTQGVKE 108
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 109 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 168
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 169 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 228
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 229 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGDGEDGRI 288
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 289 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 326
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL I AG ++GAL+ DGL DG+ L
Sbjct: 472 RVGEHRALAHQLTVEGLQNPVIFFQHYSENA-AEDLQIKAGADMGALIFDGLCDGIYLFN 530
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++ TSHL G+
Sbjct: 531 QGELSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKAATSHLKGLK 590
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK +G
Sbjct: 591 IGIMGCIVNGPGEMADADYGYVGAGRGKVSLYKRKECIEKNIPEEEAVEKLIELIKANGD 650
Query: 734 WAE 736
+ E
Sbjct: 651 YEE 653
>gi|261878898|ref|ZP_06005325.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334479|gb|EFA45265.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 644
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 204/302 (67%), Gaps = 6/302 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V VG + +G ++P+R+Q+MTT +T D V + RI G +LVR+T QG RE
Sbjct: 9 RRSSSVVHVGAIDMGGDNPVRIQSMTTTNTNDTEACVAQAERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF-DKIRVNPGNFADRRAQFEQLE 203
A+ I +L Q ++ PLVAD+HF P VA VA C+ +K+R+NPGN+ D +F + E
Sbjct: 69 AENLRNINAALRQAGFSTPLVADVHFNPKVA-DVAACYAEKVRINPGNYVDPARKFIRQE 127
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY +EL+ IEE F P + CK A+RIG NHGSLSDRI + YGD+P G+VES
Sbjct: 128 YTDEEYARELKKIEERFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCL 187
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC+ F + + S+K+SN VVMVQ+ RLLV +M YPLHLGVTEAGEGEDGR
Sbjct: 188 EFLRICKTQHFDDVVISIKSSNTVVMVQSVRLLVGKMEEEDMHYPLHLGVTEAGEGEDGR 247
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL---QQGVAPFEE 379
+KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A +L Q A F+
Sbjct: 248 IKSAVGIGALLADGIGDTIRVSLSEEPEDEIPVARHLVDYIGRKAGQLVIPGQAYAGFDW 307
Query: 380 KH 381
H
Sbjct: 308 LH 309
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF-LRDTSFNLLQGCRMRNTKTEYVSC 645
+D+ + + ++GAL++DGL DG+ L G+ D + +T+F +LQ R+R T+TEY+SC
Sbjct: 495 KDEFQLQSAADMGALMMDGLTDGIWLMNDGRIADEEIEETAFGILQAGRLRTTRTEYISC 554
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL+DL+ A I+E T L G+ I IMGCIVNGPGEMADAD+GYVG PGK+ LY
Sbjct: 555 PGCGRTLYDLRTTIARIKEATKELKGLKIGIMGCIVNGPGEMADADYGYVGAGPGKVSLY 614
Query: 706 VGKTVVKRGIAMEQATDALIQLIKD 730
+ V+ I E A D L++LI+D
Sbjct: 615 RKQECVEHNIPEEDAVDRLLKLIRD 639
>gi|294675478|ref|YP_003576094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
ruminicola 23]
gi|294473248|gb|ADE82637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
ruminicola 23]
Length = 461
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/279 (53%), Positives = 189/279 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ VG + IG ++PIR+Q+M T DT + G V + RI D G +LVR T QG RE
Sbjct: 4 RRQSSEARVGGIGIGGQNPIRIQSMGTVDTNNTEGCVAQAKRIIDAGGELVRFTTQGTRE 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PLVAD+HF A A+ +K+R+NPGN+ D F+ LEY
Sbjct: 64 AENMKNISAQLKADGYNTPLVADVHFTAHTADVAAQYCEKVRINPGNYVDPGRTFKHLEY 123
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ P + CK++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 124 TDEEYAAELQKIEKQLVPFLNICKEHHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 183
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ +F++ + S+KASN VVMV RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 184 FLRIFKRENFNDVVISIKASNTVVMVTTMRLLVKTMDKEDMHYPLHLGVTEAGEGEDGRI 243
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
KSA+GIG LL +G+GDTIRVSL+E PE EI R+L ++
Sbjct: 244 KSAVGIGALLTEGIGDTIRVSLSEEPECEIPVARKLVDM 282
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPG--QDFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
+ L + A VGALL+D L++ + L + S +LQ R++ TKTEY+SC
Sbjct: 312 ETLQLKAAMAVGALLIDKKAHNLVINSSTFKDQSSKLVELSDAILQAARIKFTKTEYISC 371
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL++LQE A+I+ T + G+ I IMGCIVNGPGEMADAD+GYVG GKI LY
Sbjct: 372 PGCGRTLYNLQETIAKIKAATKDMVGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLY 431
Query: 706 VGKTVVKRGIAMEQATDALIQLI-KDHGR 733
K +++ I E+A + LI+ I KD G+
Sbjct: 432 KAKECIEKNIPEEEAVERLIEFIRKDRGQ 460
>gi|423280824|ref|ZP_17259736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 610]
gi|404583627|gb|EKA88303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 610]
Length = 655
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 49 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 108
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 109 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 168
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 169 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 228
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 229 FLRICVDEKFTDAVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGDGEDGRI 288
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 289 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 326
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL I AG ++GAL+ DGL DG+ L
Sbjct: 472 RVGEHRALAHQLTVEGLQNPVIFFQHYSENA-AEDLQIKAGADMGALIFDGLCDGIYLFN 530
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++ TSHL G+
Sbjct: 531 QGELSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKAATSHLKGLK 590
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK +G
Sbjct: 591 IGIMGCIVNGPGEMADADYGYVGAGRGKVSLYKRKECIEKNIPEEEAVEKLIELIKANGD 650
Query: 734 WAE 736
+ E
Sbjct: 651 YEE 653
>gi|255693107|ref|ZP_05416782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii DSM 17565]
gi|260621149|gb|EEX44020.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii DSM 17565]
Length = 613
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQEYMVPLVADVHFNPKVADVAARYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDENFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 108/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-E 613
R+ R L L L PV+ + +DL I A ++GAL+ DGL DG+ L
Sbjct: 431 RLGEHRALVHQLMTEGLQNPVVFFQHYAED-DAEDLQIKAAADMGALIFDGLCDGIFLFN 489
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 490 QGGLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLTGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 605
>gi|313149353|ref|ZP_07811546.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138120|gb|EFR55480.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 614
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 187/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGNGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 285
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L L+ L PVI + +DL I AG ++GAL+ DGL DG+ L
Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYSENA-AEDLQIKAGADMGALIFDGLCDGIYLFN 489
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++ TSHL G+
Sbjct: 490 QGELSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKAATSHLKGLK 549
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GK+ LY K +++ I E+A + LI+LIK +G
Sbjct: 550 IGIMGCIVNGPGEMADADYGYVGAGRGKVSLYKRKECIEKNIPEEEAVEKLIELIKANGD 609
Query: 734 WAE 736
+ E
Sbjct: 610 YEE 612
>gi|319639782|ref|ZP_07994512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_40A]
gi|345518927|ref|ZP_08798360.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 4_3_47FAA]
gi|254833565|gb|EET13874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 4_3_47FAA]
gi|317388599|gb|EFV69448.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_40A]
Length = 614
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKAEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + DT+ F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGPLSHIVVDTTAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKTATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|423312874|ref|ZP_17290810.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus CL09T03C04]
gi|392686905|gb|EIY80204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus CL09T03C04]
Length = 614
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AEHLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKAEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + DT+ F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGPLSHIVVDTTAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKTATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|294778017|ref|ZP_06743451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus PC510]
gi|294448075|gb|EFG16641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus PC510]
Length = 614
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVQEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKAEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + DT+ F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGPLSHIVVDTTAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKTATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|298482258|ref|ZP_07000445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D22]
gi|298271545|gb|EFI13119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D22]
Length = 614
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 VENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L L PVI + ++L I + ++GAL+ DGL DG+ L
Sbjct: 432 RLGEHRALVHQLMTEGLQNPVIFFQHYAED-DAENLQIKSAADMGALIFDGLCDGIFLFN 490
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+
Sbjct: 491 QGSLSHAVVDATAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I+
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIR 606
>gi|224537631|ref|ZP_03678170.1| hypothetical protein BACCELL_02513 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520740|gb|EEF89845.1| hypothetical protein BACCELL_02513 [Bacteroides cellulosilyticus
DSM 14838]
Length = 593
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 186/269 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINAGLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC K DF +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVKEDFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
LGDTIRVSL+E PE EI R+L + M+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVDYIMQ 269
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 411 RLGEHRALVHQLMQEGLKNPVVFFQHYAEN-EAEDLQIKSAADMGALIFDGLCDGIFLFN 469
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R+R +KTEY+SCP CGRTLFDLQ A ++ TSHL G+
Sbjct: 470 QGNLTHAVVDATAFGILQAGRIRTSKTEYISCPGCGRTLFDLQSTIARVKAATSHLKGLK 529
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 530 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKANGD 589
Query: 734 WAE 736
+ E
Sbjct: 590 YEE 592
>gi|399155434|ref|ZP_10755501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR324
cluster bacterium SCGC AAA001-C10]
Length = 388
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 206/313 (65%), Gaps = 2/313 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T TV +G++ IG P+R+Q+M T+DT +V +EE+ + +++R+TV ++
Sbjct: 5 RRYTNTVSIGSIKIGGSEPVRIQSMLTSDTTNVESCIEEIAGLDAVDCEIIRLTVPNQKS 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
D+ EI+ + ++ PLVADIHF P +A+ V E +K+R+NPGN+ DR+ +FE EY
Sbjct: 65 IDSLPEIRTEMKKRGIERPLVADIHFNPQLAVNVCEFVEKVRINPGNYVDRK-KFEVREY 123
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +YQ+EL+ +EE PL++ KKYG A+RIGTNHGSLSDR+M+ +GDSP GMVESA E
Sbjct: 124 TDMQYQEELERVEEKLLPLIQNLKKYGCALRIGTNHGSLSDRLMNRFGDSPEGMVESAME 183
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK +F + SMK+SNP+VM+++YR LV M YPLHLGVTEAG DGR+
Sbjct: 184 FLRILRKHNFEETVLSMKSSNPLVMIESYRQLVRVMDDENMHYPLHLGVTEAGNELDGRI 243
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG GDTIRVSLTEP E EI P R R+ R +
Sbjct: 244 KSAVGIGALLCDGFGDTIRVSLTEPSENEI-PVARSILQSTRSRIFNADFISCPSCGRTF 302
Query: 385 FDFQRRSGQLPIQ 397
FD + + Q+ +
Sbjct: 303 FDLESTTEQIKVH 315
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 120/185 (64%), Gaps = 9/185 (4%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+++ R+L + + N+++P+ H+ + D I + +GALL DG GD + L
Sbjct: 209 IESYRQLVRVMDDENMHYPL--HLGVTEAGNELDGRIKSAVGIGALLCDGFGDTIRVSLT 266
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
E + R ++LQ R R +++SCPSCGRT FDL+ + +I+ TSHL GV
Sbjct: 267 EPSENEIPVAR----SILQSTRSRIFNADFISCPSCGRTFFDLESTTEQIKVHTSHLKGV 322
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADADFGYVG APGKI+L+ GKT V+R + E+A + LI LIK++G
Sbjct: 323 KIAVMGCIVNGPGEMADADFGYVGAAPGKINLFHGKTCVERNVPAERAVERLIDLIKENG 382
Query: 733 RWAEP 737
+WA+P
Sbjct: 383 KWADP 387
>gi|354603198|ref|ZP_09021197.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
indistinctus YIT 12060]
gi|353349075|gb|EHB93341.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
indistinctus YIT 12060]
Length = 589
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/327 (47%), Positives = 207/327 (63%), Gaps = 23/327 (7%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYC+S+ R TR V VG+V IG +P+R+Q+MT DT D + +V RIA G +
Sbjct: 2 RKYCDSLTAYARAATRPVAVGSVVIGGGNPVRIQSMTNTDTNDTEASAAQVRRIAGAGGE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VR+T QG+REA I+ L ++ ++PLVADIHF P AL AE +K+R+NPGNF
Sbjct: 62 IVRLTAQGRREAANLAAIRARLREEGCSVPLVADIHFVPEAALVAAENVEKVRINPGNFN 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
DR QF++L V C+++G A+RIG NHGSLS +M YGD
Sbjct: 122 DRGGQFDRL---------------------VALCREHGTALRIGVNHGSLSAAVMERYGD 160
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMV SA E+ +CR+ F + S+K+SN VMVQAYRLL AEM GWDYPLHLGV
Sbjct: 161 TPEGMVASAVEYLALCRERGFDPVVVSLKSSNVRVMVQAYRLLAAEMRERGWDYPLHLGV 220
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG+ +GR+KSA+GIG LL DGLGDTIRVSLTE PE+EI R+LA+ A E
Sbjct: 221 TEAGDDMEGRIKSAVGIGALLADGLGDTIRVSLTEAPEREIPVARQLADY-FAAREGHAP 279
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEG 400
+ +E ++++RR + P++ G
Sbjct: 280 IPAVDESFYSPYEYRRRRSE-PVEGVG 305
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 85/112 (75%)
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 685
S +LQ R+R +K EY++CPSCGRTL+DLQE A I+ +T+HL GV I +MGCIVNGPG
Sbjct: 478 SLAILQAARVRISKAEYIACPSCGRTLYDLQETLAAIKARTAHLVGVKIGVMGCIVNGPG 537
Query: 686 EMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
EMADAD+GYVG PG+I LY G+ VV+RGI +A D L+ L++ G+W EP
Sbjct: 538 EMADADYGYVGAGPGRITLYRGREVVRRGIPQAEALDELVALLRADGKWREP 589
>gi|423230211|ref|ZP_17216615.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T00C15]
gi|423243924|ref|ZP_17224999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T12C06]
gi|392631720|gb|EIY25689.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T00C15]
gi|392643442|gb|EIY37192.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T12C06]
Length = 614
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKTEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G DT+ F++LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGSLSHIAVDTTAFSILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|339625705|ref|YP_004717184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2c]
gi|339460545|gb|AEJ77048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2c]
Length = 568
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 178/249 (71%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADI
Sbjct: 1 MTTTATTDVDGTVRQICALQELGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P A+ V +C DK+R+NPGN+ D+R F Y+D++Y L+H+ FSPLVEKCK
Sbjct: 61 HFFPQAAIHVVDCVDKVRINPGNYVDKRNMFTGKIYSDEQYAHSLEHLMNKFSPLVEKCK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ G+A+RIG NHGSLS+R+ YG++ GMV SA E+A +C +D+H+ +FSMK+SNP V
Sbjct: 121 RLGKAMRIGVNHGSLSERVTQRYGNTIEGMVYSALEYAEVCVAMDYHDVIFSMKSSNPKV 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV AYR L E+ W YPLHLGVTEAG G G +KSA+GIGTLL +GLGDTIR SLT
Sbjct: 181 MVAAYRSLAYELDQREWSYPLHLGVTEAGSGTAGIVKSAVGIGTLLSEGLGDTIRCSLTG 240
Query: 349 PPEKEIDPC 357
P EI C
Sbjct: 241 SPINEIPIC 249
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
PF ++ + ARR F + PV + +++ +I +GALL+DGL
Sbjct: 380 PFVYFEVTDIHTARRFFSLRQHSTQ--PVCLSFSLDPHLSKNEAIIDLSARLGALLLDGL 437
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
G +LL+ D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T
Sbjct: 438 GSCVLLDF--VDIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERT 495
Query: 667 SHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
HLPG + IA+MGCIVNGPGEMADADFGYVG PG IDLYV VK I +E A + L+
Sbjct: 496 KHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELV 555
Query: 726 QLIKDHGRWAEP 737
QL+K+HG W EP
Sbjct: 556 QLLKEHGVWKEP 567
>gi|237709516|ref|ZP_04539997.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 9_1_42FAA]
gi|229456572|gb|EEO62293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 9_1_42FAA]
Length = 614
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKTEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G DT+ F++LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGSLSHIAVDTTAFSILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMAD D+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADTDYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|265754723|ref|ZP_06089775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_33FAA]
gi|345514560|ref|ZP_08794071.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei 5_1_36/D4]
gi|423241060|ref|ZP_17222174.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL03T12C01]
gi|229436628|gb|EEO46705.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei 5_1_36/D4]
gi|263234837|gb|EEZ20405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_33FAA]
gi|392643122|gb|EIY36880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL03T12C01]
Length = 614
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 432 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKTEDLQIKAAADMGALIFDGLCDGIFLYN 490
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G DT+ F++LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 491 QGSLSHIAVDTTAFSILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKAATSHLKGLK 550
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 551 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 610
Query: 734 WAE 736
+ E
Sbjct: 611 YTE 613
>gi|224025251|ref|ZP_03643617.1| hypothetical protein BACCOPRO_01985 [Bacteroides coprophilus DSM
18228]
gi|224018487|gb|EEF76485.1| hypothetical protein BACCOPRO_01985 [Bacteroides coprophilus DSM
18228]
Length = 618
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V VG +G +PIR+Q+MT T D +E+ RI D G + VR+T QG RE
Sbjct: 8 RRQSNEVYVGATPMGGANPIRIQSMTNTVTMDTEACIEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L ++ Y PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINAGLREQGYMAPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I F P ++ CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRARFVPFLQICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLL +M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEQFSDVVISIKASNTVVMVKTVRLLAEQMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 3/182 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + L PV+ QF + +DL I A ++GAL+ DG DG+L+
Sbjct: 431 RLGELRGLVHQMMVQGLENPVVF-FQFYQENNLEDLQIKAAADMGALIFDGFCDGILIYN 489
Query: 615 PGQDF--DFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G+ + +T+F +LQ R+R +KTEY+SCP CGRTL++L+ A I+ TSHL G+
Sbjct: 490 HGESIMDTKIDETAFGILQAGRIRTSKTEYISCPGCGRTLYNLESTIARIKAATSHLKGL 549
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E A + LI+LIK +G
Sbjct: 550 KIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEHAVEKLIELIKANG 609
Query: 733 RW 734
+
Sbjct: 610 DY 611
>gi|317504399|ref|ZP_07962383.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
salivae DSM 15606]
gi|315664521|gb|EFV04204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
salivae DSM 15606]
Length = 613
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/278 (52%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV +G + +GS+ P+RVQ+MTT +T D V + I G +LVR+T QGKRE
Sbjct: 10 RRETSTVHIGAIDMGSDFPVRVQSMTTTNTNDTEACVRQAEEIIKAGGELVRLTTQGKRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKNINAQLRSEGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE+ P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEDRLIPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C++ +F + + S+K+SN VVMV++ RLLV +M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRVCKRENFTDVVISIKSSNTVVMVRSVRLLVHQMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLSDGIGDTIRVSLSEEPAAEIPVARHLVD 287
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 10/181 (5%)
Query: 555 RVQAARRLFEYLSENNLNFPVI-----HHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
R+ R L + EN PV+ HH + + + + + ++GAL++DGL DG
Sbjct: 430 RLAEQRALVHEMWENGAYNPVVFAEMYHH----SAAEKSEFQLESAADMGALMIDGLTDG 485
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSH 668
L L G + DT+F +LQ R+R +KTEY+SCP CGRTL+DL+E A IRE T
Sbjct: 486 LWLMNEGDIPQSVITDTAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIARIREATKG 545
Query: 669 LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
+ G+ I IMGCIVNGPGEMADAD+GYVG + LY + V++ I E A + L+ LI
Sbjct: 546 MKGLKIGIMGCIVNGPGEMADADYGYVGAGINHVSLYRKQVCVEKNIPQEVAVEHLLALI 605
Query: 729 K 729
+
Sbjct: 606 R 606
>gi|270295400|ref|ZP_06201601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D20]
gi|270274647|gb|EFA20508.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D20]
Length = 602
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/265 (55%), Positives = 184/265 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L Q
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINIGLRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVQENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + + L PV+ + ++L I A ++GAL+ DGL DG+LL
Sbjct: 418 RLGEQRALVHQMMKEGLKNPVVFFEHYAES-ELENLQIKAAADMGALIFDGLCDGILLFN 476
Query: 615 PGQDFD--FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G+ + T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T HL G+
Sbjct: 477 QGETISGKVVDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKAATGHLKGL 536
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 537 KIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKSNG 596
Query: 733 RWAE 736
+AE
Sbjct: 597 DYAE 600
>gi|160891501|ref|ZP_02072504.1| hypothetical protein BACUNI_03952 [Bacteroides uniformis ATCC 8492]
gi|156858908|gb|EDO52339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis ATCC 8492]
Length = 602
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 183/265 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L Q
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINIGLRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVQENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLATVMEQEGMRFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + + L PV+ + ++L I A ++GAL+ DGL DG+LL
Sbjct: 418 RLGEQRALVHQMMKEGLKNPVVFFEHYAES-ELENLQIKAAADMGALIFDGLCDGILLFN 476
Query: 615 PGQDFD--FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G+ + T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T HL G+
Sbjct: 477 QGETISGKVVDATAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKAATGHLKGL 536
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 537 KIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKSNG 596
Query: 733 RWAE 736
+AE
Sbjct: 597 DYAE 600
>gi|254526525|ref|ZP_05138577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9202]
gi|221537949|gb|EEE40402.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9202]
Length = 405
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKEKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + L N+P+ H+ D I + +G LL +GLGD + L EA
Sbjct: 230 AYRMIADRLDSEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+ I
Sbjct: 288 PEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
AIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ +ALIQLIKD G W
Sbjct: 344 AIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVNALIQLIKDDGNW 402
Query: 735 AEP 737
+P
Sbjct: 403 IDP 405
>gi|298373205|ref|ZP_06983195.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroidetes
oral taxon 274 str. F0058]
gi|298276109|gb|EFI17660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroidetes
oral taxon 274 str. F0058]
Length = 384
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/270 (51%), Positives = 193/270 (71%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VGN+ IG +P+RVQTMT DT D+ G+VE++ R GA+++R+T QG+RE
Sbjct: 3 RRQTIEVRVGNIGIGGSNPVRVQTMTNTDTNDIEGSVEQIKRCVAAGAEIIRLTTQGERE 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
++ EIK L +PLVAD+HF+ SVAL+ A DK+R+NPGNF + +Y
Sbjct: 63 VNSVAEIKRRLAAVGIVVPLVADVHFSSSVALKAACVVDKVRINPGNFIKPIKKDFTTDY 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+E+++E + E F ++ CKK+ AVRIG NHGSL +R+M+ YGD+P GM ES E
Sbjct: 123 TDEEFEQERLVLRERFVEFLDVCKKHRTAVRIGVNHGSLGERMMNRYGDTPMGMAESCLE 182
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
R+CR+ +F + S+KASN V+M++A +LLV +M + +PLHLGVTEAG+GEDGR+
Sbjct: 183 LLRMCRQENFDQIVISLKASNTVLMIEAVKLLVEKMDAEDFHFPLHLGVTEAGDGEDGRI 242
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
KSA+GIG+LL G+GDTIRVSL+EPPE EI
Sbjct: 243 KSAVGIGSLLAVGIGDTIRVSLSEPPEAEI 272
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
++A + L E + + +FP+ H+ +D I + +G+LL G+GD + L
Sbjct: 208 IEAVKLLVEKMDAEDFHFPL--HLGVTEAGDGEDGRIKSAVGIGSLLAVGIGDTIRVSLS 265
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
E P + +F +LQ R R TKTEY+SCPSCGRTLFDLQ +RE+TSHL G+
Sbjct: 266 EPPEAEIP----VAFGILQATRSRITKTEYISCPSCGRTLFDLQTAVRRVRERTSHLVGL 321
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
IA+MGCIVNGPGEMADAD+GYVG GKI LY GKT V+R I ++A D L+ LI +
Sbjct: 322 KIAVMGCIVNGPGEMADADYGYVGAGKGKISLYKGKTCVERNIPEDEAIDKLLALIDKY 380
>gi|383810805|ref|ZP_09966293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 306 str. F0472]
gi|383356653|gb|EID34149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 306 str. F0472]
Length = 644
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 194/277 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTTVAHVGALNIGGENPVRIQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLQHINAGLRAAGYNTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+V S E
Sbjct: 129 TDEEYAQELKKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK +FH+ + S+K+SN VVMV++ RLLV+EM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYNFHDVVISIKSSNTVVMVRSVRLLVSEMEKEGMTYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKYLA 285
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSC 645
++ + A ++GAL++DGL DGL L G + + T+F +LQ R+R KTEY+SC
Sbjct: 493 KEQFQLEAAADMGALMMDGLTDGLWLMNNGDLAQEDVEQTAFAILQAGRLRMVKTEYISC 552
Query: 646 PSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
P CGRTL+DL+ A I+E T + G+ + IMGCIVNGPGEMADAD+GYVG P K+ LY
Sbjct: 553 PGCGRTLYDLRTTIARIKEATKGMKGLKVGIMGCIVNGPGEMADADYGYVGAGPKKVSLY 612
Query: 706 VGKTVVKRGIAMEQATDALIQLIK 729
+ V+ I E+A + L+ LIK
Sbjct: 613 RKQECVEHNIPEEEAVEHLLALIK 636
>gi|126696067|ref|YP_001090953.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9301]
gi|126543110|gb|ABO17352.1| GcpE protein [Prochlorococcus marinus str. MIT 9301]
Length = 405
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPARTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 MAAYRMIADRLDSEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRTATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ +ALIQLIKD G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVNALIQLIKDDG 400
Query: 733 RWAEP 737
+W +P
Sbjct: 401 KWIDP 405
>gi|299142083|ref|ZP_07035217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris C735]
gi|298576545|gb|EFI48417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris C735]
Length = 611
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +G + +GSE+P+RVQ+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 10 RRKTSTVHIGAIDMGSEYPVRVQSMTTTNTNDTEACVKQAEEIIKAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKPINAQLRADGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE+ P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEDRLIPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ F N + S+KASN ++MV++ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFKREKFDNVVISIKASNTIIMVRSVRLLVETMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 287
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPN-GIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L + EN + PV+ + + + D + A ++GAL++DGL DGL L
Sbjct: 430 RLAEQRALVHEMWENGVFNPVVFAQMYRHTAAEKSDFQLEAAADMGALMIDGLTDGLWLM 489
Query: 614 APGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G + DT F +LQ R+R +KTEY+SCP CGRTL+DL+E A IRE T + G+
Sbjct: 490 NDGDIPQSIITDTVFGILQAARLRTSKTEYISCPGCGRTLYDLRETIARIREATKDMKGL 549
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG ++ LY + V++ I E A + L+ LI+
Sbjct: 550 KIGIMGCIVNGPGEMADADYGYVGAGVNRVSLYRKQVCVEKNIPQEVAVEHLLALIR 606
>gi|123968266|ref|YP_001009124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. AS9601]
gi|123198376|gb|ABM70017.1| GcpE protein [Prochlorococcus marinus str. AS9601]
Length = 405
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 MAAYRMIADRLDSEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ +ALIQLIKD G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVNALIQLIKDDG 400
Query: 733 RWAEP 737
+W +P
Sbjct: 401 KWIDP 405
>gi|157413096|ref|YP_001483962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9215]
gi|157387671|gb|ABV50376.1| GcpE protein [Prochlorococcus marinus str. MIT 9215]
Length = 405
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 MAAYRMIADRLDSEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ +ALIQLIKD G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVNALIQLIKDDG 400
Query: 733 RWAEP 737
W +P
Sbjct: 401 NWIDP 405
>gi|401406670|ref|XP_003882784.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, related
[Neospora caninum Liverpool]
gi|325117200|emb|CBZ52752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, related
[Neospora caninum Liverpool]
Length = 1294
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 207/347 (59%), Gaps = 72/347 (20%)
Query: 76 YCESIHKTVRRKTRTVMVGN-------------------------------VAIGSEHPI 104
YC S T R TRTV+VG V IG HP+
Sbjct: 342 YCVSTASTQRLSTRTVVVGRGALAAPYHDFFASSSSSSSLTPPGSWREGYPVLIGGSHPL 401
Query: 105 RVQTMTTNDTKDVAGTVEE------------VMRIADQGAD-----LVRITVQGKREADA 147
VQTMT +DT+DV TVE+ +R++ + + +VR+TVQG +E +A
Sbjct: 402 VVQTMTNSDTRDVQATVEQASPAAFGPTRRDTLRLSAELSCGPRTFMVRMTVQGMKEVEA 461
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFE-QLEYT- 205
IK L + N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E ++E
Sbjct: 462 SKFIKEKLDKANLRIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEVESAT 521
Query: 206 ------------------DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
DD +++ IEE+ PL+EKCK + A+RIGTNHGSLS RI
Sbjct: 522 GSNLPDERRREAEAERRFDDGHKR----IEELLVPLIEKCKTFNTAMRIGTNHGSLSARI 577
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+ YGD+PRGMV SAFEFA IC + F NF FSMK+SNP VMV AYRLL +EM +
Sbjct: 578 LRRYGDTPRGMVASAFEFADICVRESFRNFCFSMKSSNPRVMVHAYRLLASEMLRRNELF 637
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
P+HLGVTEAGEGEDGR+KSA+GIG LLQDG+GDT+RVSLTEPP +EI
Sbjct: 638 PIHLGVTEAGEGEDGRLKSAVGIGALLQDGIGDTLRVSLTEPPWREI 684
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 120/150 (80%)
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I AG VG+LLVD LG+G+L++ PG FNLLQ CR+R+TKTE++SCPSCGR
Sbjct: 1139 AIYAGWEVGSLLVDALGEGVLVDLPGLSLPRQIRLGFNLLQACRLRSTKTEFISCPSCGR 1198
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLFD+Q++SAEIR +T HLPGV+IA+MGCIVNG GEMADADFGYVGGAPGK+DLYV K V
Sbjct: 1199 TLFDIQKVSAEIRRRTGHLPGVTIAVMGCIVNGVGEMADADFGYVGGAPGKVDLYVKKKV 1258
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
VKRGI +A DAL+ LIK HGRW +PP E
Sbjct: 1259 VKRGIPSAEACDALVALIKQHGRWVDPPKE 1288
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 42/158 (26%)
Query: 376 PFEEKHRHYFDFQRRS--------------------GQLPIQKEGEEVDYRGVLHRDGSV 415
PFEE+ R++ + ++R+ G+ Q+ G+E +LHRDG+V
Sbjct: 790 PFEERTRNFENIEKRTIRPLFSRSRATQADTDGKGEGEPESQRTGDER----ILHRDGTV 845
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR--ELPSVDD--------HD 465
++ VS L+ PE+ YK+L K+V G PF+ +A+VDSI L LPS +
Sbjct: 846 MVRVSPAMLEVPEVFYKALGCKVVGGKPFRSIASVDSIYLPSLSLPSQQEGRGLVARAAQ 905
Query: 466 ARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
AR L L + +GV+ P P LV+LQ+
Sbjct: 906 ARETLHALQEAGVGVLV--------PFPDLAYLVSLQK 935
>gi|373460579|ref|ZP_09552330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
maculosa OT 289]
gi|371955197|gb|EHO73001.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
maculosa OT 289]
Length = 619
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 188/287 (65%), Gaps = 1/287 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV VG + +GSE PIRVQ+MTT +T D V + I + G +LVR+T QG RE
Sbjct: 10 RRETTTVHVGAIDMGSEFPIRVQSMTTTNTNDTEACVRQAEEIIEAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F EY
Sbjct: 70 AENLKHINAQLRADGYQTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIVHEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+ Y EL I++ F P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEAYATELNKIDDRFVPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F N + S+K+SN V+MV A RLLV M G YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRICKRESFDNVVISIKSSNTVIMVLAVRLLVDRMAKEGIKYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL 370
KSA+GIG LL DG+GDTIRVSL+E P EI R L +G R L
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVEYIGRREGHL 296
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPN-GIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ- 617
R L + EN ++ PV+ + + + D + A ++GAL++DGL DGL L G
Sbjct: 435 RALVHEMWENGVHNPVVFAQMYRHTAAEKSDFQLEAAADMGALMIDGLTDGLWLMNDGDL 494
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIM 677
+ DTSF +LQ R+R +KTEY+SCP CGRTL++L+E A IRE T + G+ I IM
Sbjct: 495 SQSVITDTSFGILQAARLRTSKTEYISCPGCGRTLYELRETIARIREATKDMKGLKIGIM 554
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
GCIVNGPGEMADAD+GYVG ++ LY + V++ I E A + L+ LI+
Sbjct: 555 GCIVNGPGEMADADYGYVGAGINRVSLYRKQVCVEKNIPQEVAVEHLLALIR 606
>gi|373500768|ref|ZP_09591141.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
micans F0438]
gi|371951726|gb|EHO69569.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
micans F0438]
Length = 635
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/276 (56%), Positives = 192/276 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT V VG + IG ++P+R+Q+MTT T D + + RI D G +LVR+T QG+RE
Sbjct: 10 RRKTSVVHVGCLDIGGDNPVRIQSMTTTSTDDTEASTAQTERIVDAGGELVRLTTQGRRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y P+ AD+HF +VA A +K+R+NPGN+ D F+Q++Y
Sbjct: 70 AENLRNIIAQLRADGYTTPICADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKQIDY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ +E ++ CK+ G AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 130 TDEEYSRELQKLEARLVQFIDICKQNGTAVRIGVNHGSLSDRIMSRYGDTPVGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DF N + S+KASN VVMVQ+ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFRKHDFANVVISIKASNTVVMVQSVRLLVAEMDKAGMSYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG LL DG+GDTIRVSL+E PE EI R L
Sbjct: 250 KSALGIGALLSDGIGDTIRVSLSEEPECEIPVARHL 285
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLL----EAPGQDFDFLRDTSFNLLQGCRMRNTKTEY 642
+D + ++GAL++DGL DG+ L + P D + T+F +LQ R+R KTEY
Sbjct: 483 KDAFQLETAADMGALMLDGLADGIWLMNQGDLPPSDIE---QTAFGILQAARLRMVKTEY 539
Query: 643 VSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
+SCP CGRTL+DL+ A I+E T H+ G+ I IMGCIVNGPGEMADADFGYVG PGK+
Sbjct: 540 ISCPGCGRTLYDLRTTIARIKEATKHMKGLKIGIMGCIVNGPGEMADADFGYVGAGPGKV 599
Query: 703 DLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+LY K V R I +A + L++LI P
Sbjct: 600 NLYHRKECVVRNIPESEAVERLLELINSSNSPNSP 634
>gi|78184752|ref|YP_377187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9902]
gi|123581465|sp|Q3AXP3.1|ISPG_SYNS9 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|78169046|gb|ABB26143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9902]
Length = 401
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 203/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ D G +
Sbjct: 6 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVDAGCE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T+ E+ + I E F PLV+ ++ +A+RIG NHGSL++R++ YG
Sbjct: 123 VFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTMDQEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YIACP 307
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 11/216 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E + I D+D I+ + + + + A R + + + + N+P+ H+
Sbjct: 190 ESAMEFVRICDDLDFHNIVISMKASRAPV-MLSAYRLMADTMDQEGFNYPL--HLGVTEA 246
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
D I + + LL +GLGD + L EAP ++ +++LQ +R T E
Sbjct: 247 GDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIP----VCYSILQSLGLRKTMVE 302
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
Y++CPSCGRTLF+L+++ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG
Sbjct: 303 YIACPSCGRTLFNLEDVLHKVRNATSHLKGLDIAVMGCIVNGPGEMADADYGYVGKGPGI 362
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I LY G+ +++ + ++ ALIQLI++ G W +P
Sbjct: 363 IALYRGREEIRK-VPEKEGVQALIQLIQEDGLWVDP 397
>gi|189465297|ref|ZP_03014082.1| hypothetical protein BACINT_01645 [Bacteroides intestinalis DSM
17393]
gi|189437571|gb|EDV06556.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
intestinalis DSM 17393]
Length = 593
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 185/269 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + I + G + VR+T QG +EA+ I L +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKLIVNAGGEYVRLTAQGIKEAENLMNINAGLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC K +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICIKENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
LGDTIRVSL+E PE EI R+L + M+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVDYIMQ 269
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L PV+ + +DL I + ++GAL+ DGL DG+ L
Sbjct: 411 RLGEHRALVHQLMQEGLKNPVVFFQHYAEN-EAEDLQIKSAADMGALIFDGLCDGIFLFN 469
Query: 615 PGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++ TSHL G+
Sbjct: 470 QGDLSHAVVDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKAATSHLKGLK 529
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G
Sbjct: 530 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIKANGD 589
Query: 734 WAE 736
+ E
Sbjct: 590 YEE 592
>gi|323343691|ref|ZP_08083918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oralis ATCC 33269]
gi|323095510|gb|EFZ38084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oralis ATCC 33269]
Length = 612
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 210/336 (62%), Gaps = 19/336 (5%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G + +G ++ IRVQ+MTT DT D G + + RI G +LVR+T QG RE
Sbjct: 9 RRPSSVVHIGAIDMGGDNAIRVQSMTTTDTNDTEGCIAQAERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 69 AENLKNINAGLRARGYDTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARRFIKQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D+EY +EL IE F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 SDEEYAQELHKIEARFVPFINICKQNHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN V+MV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKERFSNVVISVKASNTVIMVRSVRLLVDRMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI + L + +QG +
Sbjct: 249 KSAVGIGALLADGIGDTVRVSLSEEPEMEIPVAQHLVEYVTK----RQGHLVVPAERYAN 304
Query: 385 FDF----QRRS--------GQLPI---QKEGEEVDY 405
FD+ +RR+ G +P+ KEG + DY
Sbjct: 305 FDYLRPERRRTVPVRNIGGGNVPVVITSKEGAKSDY 340
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
A ++GAL++DGL DG+ L G + +T+F +LQ R+R +KTEY+SCP CGRTL
Sbjct: 468 ASADMGALMIDGLADGIWLMNNGDLPQSVVEETAFGVLQAARLRTSKTEYISCPGCGRTL 527
Query: 653 FDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+DL+E A+I+E T + G+ I IMGCIVNGPGEMADAD+GYVG P ++ LY + V+
Sbjct: 528 YDLRETIAKIKEATEEMKGLKIGIMGCIVNGPGEMADADYGYVGAGPKRVSLYRKQQCVE 587
Query: 713 RGIAMEQATDALIQLIKD 730
+ I E A + L++LI++
Sbjct: 588 KNIPEEDAVERLLKLIRE 605
>gi|352094372|ref|ZP_08955543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8016]
gi|351680712|gb|EHA63844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8016]
Length = 397
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 205/309 (66%), Gaps = 5/309 (1%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
+ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V + R+AD
Sbjct: 1 MTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGIRRLAD 57
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVN 188
G ++VR+T A A +I+ +L + NIPLVAD+H +AL VA+ DK+R+N
Sbjct: 58 AGCEIVRVTTPSIGHAIAMGKIRAALRAQGCNIPLVADVHHNGTRIALEVAKHVDKVRIN 117
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PG F + E+ E++ +E+ I+E F+PLV K+ +A+RIG NHGSL++R++
Sbjct: 118 PGLFVFDKPDPERQEFSQEEFDAIGDRIKETFAPLVRVLKEQNKALRIGVNHGSLAERML 177
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
YGD+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YP
Sbjct: 178 FTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDREGFNYP 237
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
LHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R
Sbjct: 238 LHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGIRK 297
Query: 368 AELQQGVAP 376
++ P
Sbjct: 298 TMVEYVACP 306
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + N+P+ H+ D I + + LL +GLGD + L
Sbjct: 219 LAAYRLMADTMDREGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLT 276
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 277 EAPEKEIP----VCFSILQALGIRKTMVEYVACPSCGRTLFNLEEVLHQVRNATSHLTGL 332
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY + +++ + + AL+QLIKD G
Sbjct: 333 DIAVMGCIVNGPGEMADADYGYVGKGPGVIALYRNRDEIRK-VPESEGVAALVQLIKDDG 391
Query: 733 RWAEP 737
RW EP
Sbjct: 392 RWVEP 396
>gi|113952754|ref|YP_730878.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9311]
gi|123031690|sp|Q0I9J4.1|ISPG_SYNS3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|113880105|gb|ABI45063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9311]
Length = 398
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 208/310 (67%), Gaps = 5/310 (1%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
++ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+A
Sbjct: 1 MMTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGILRLA 57
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRV 187
D G ++VR+T A A +I+++L + IPLVAD+H +AL VA+ DK+R+
Sbjct: 58 DAGCEIVRVTTPSIGHAKAMGKIRSALRAQGCKIPLVADVHHNGTRIALEVAKHVDKVRI 117
Query: 188 NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
NPG F + ++ E++ +E+ I+E F+PLV+ K+ +A+RIG NHGSL++R+
Sbjct: 118 NPGLFVFDKPDPDRQEFSKEEFDAIGDRIKETFAPLVQVLKEQNKALRIGVNHGSLAERM 177
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+ YGD+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++Y
Sbjct: 178 LFTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDREGFNY 237
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
PLHLGVTEAG+G+ GR+KS GI TLL +GLGDT+RVSLTE PEKEI C L LG+R
Sbjct: 238 PLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTLRVSLTEAPEKEIPVCFSILQALGIR 297
Query: 367 AAELQQGVAP 376
++ P
Sbjct: 298 KTMVEYVACP 307
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + N+P+ H+ D I + + LL +GLGD L L
Sbjct: 220 LAAYRLMADTMDREGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTLRVSLT 277
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+
Sbjct: 278 EAPEKEIP----VCFSILQALGIRKTMVEYVACPSCGRTLFNLEEVLHQVRNATCHLTGL 333
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY + +++ + + +AL+QLIKD G
Sbjct: 334 DIAVMGCIVNGPGEMADADYGYVGKGPGVIALYRNRDEIRK-VPESEGVEALVQLIKDDG 392
Query: 733 RWAEP 737
RW EP
Sbjct: 393 RWVEP 397
>gi|329964277|ref|ZP_08301378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fluxus YIT 12057]
gi|328525582|gb|EGF52625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fluxus YIT 12057]
Length = 605
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 182/265 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I SL +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINASLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A +K+R+NPGN+ D F+ L+YTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAALYVEKVRINPGNYVDAARTFKHLDYTDEEYAQELQKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P ++ CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + DF +
Sbjct: 121 DRFIPFLDICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVEQDFKDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEQENMYFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 115/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L + + L+ PV+ + ++L I A ++GAL+ DGL DGLLL
Sbjct: 418 RLGEQRALVHQMMKEGLDNPVVFFEHYSED-ETENLQIKAAADMGALIFDGLCDGLLLYN 476
Query: 615 PGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G D L T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ T HL G+
Sbjct: 477 QGSIDPVLLDTTAFGILQAGRVRTSKTEYISCPGCGRTLYDLESTIARIKAATGHLKGLK 536
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LI+ +G
Sbjct: 537 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIELIRKNGD 596
Query: 734 WAE 736
+ E
Sbjct: 597 YTE 599
>gi|78779061|ref|YP_397173.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9312]
gi|78712560|gb|ABB49737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9312]
Length = 405
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 200/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNIKTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 LAAYRMIADRLDSEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ +ALIQLIKD G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVNALIQLIKDDG 400
Query: 733 RWAEP 737
+W +P
Sbjct: 401 KWIDP 405
>gi|281424689|ref|ZP_06255602.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris F0302]
gi|281401059|gb|EFB31890.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris F0302]
Length = 611
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV +G + +GSE+P+RVQ+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 10 RRETSTVHIGAIDMGSEYPVRVQSMTTTNTNDTEACVKQAEEIIKAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKPINAQLRADGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEGRLIPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ F N + S+KASN ++MV++ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFKREKFDNVVISIKASNTIIMVRSVRLLVETMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 287
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPN-GIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L + EN + PV+ + + + D + A ++GAL+VDGL DGL L
Sbjct: 430 RLAEQRALVHEMWENGVFNPVVFAQMYRHTAAEKSDFQLEAAADMGALMVDGLTDGLWLM 489
Query: 614 APGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
G + DT+F +LQ R+R +KTEY+SCP CGRTL+DL+E A IRE T + G+
Sbjct: 490 NDGDIPQSIITDTAFGILQAARLRTSKTEYISCPGCGRTLYDLRETIARIREATKDMKGL 549
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 729
I IMGCIVNGPGEMADAD+GYVG ++ LY + V++ I E A + L+ LI+
Sbjct: 550 KIGIMGCIVNGPGEMADADYGYVGAGVNRVSLYRKQVCVEKNIPQEVAVEHLLALIR 606
>gi|116070627|ref|ZP_01467896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. BL107]
gi|116066032|gb|EAU71789.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. BL107]
Length = 408
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 203/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ + G +
Sbjct: 13 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVEAGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 70 IVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLF 129
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T+ E+ + I E F PLV+ ++ +A+RIG NHGSL++R++ YG
Sbjct: 130 VFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERMLFTYG 189
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 190 DTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTMDQEGFNYPLHLG 249
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG+R ++
Sbjct: 250 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 309
Query: 372 QGVAP 376
P
Sbjct: 310 YIACP 314
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 11/216 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E + I D+D I+ + + + + A R + + + + N+P+ H+
Sbjct: 197 ESAMEFVRICDDLDFHNIVISMKASRAPV-MLSAYRLMADTMDQEGFNYPL--HLGVTEA 253
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
D I + + LL +GLGD + L EAP ++ +++LQ +R T E
Sbjct: 254 GDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIP----VCYSILQSLGLRKTMVE 309
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
Y++CPSCGRTLF+L+++ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG
Sbjct: 310 YIACPSCGRTLFNLEDVLHKVRNATSHLKGLDIAVMGCIVNGPGEMADADYGYVGKGPGT 369
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I LY G+ +++ + ++ ALIQLI++ G W +P
Sbjct: 370 IALYRGREEIRK-VPEKEGVQALIQLIQEDGLWVDP 404
>gi|123965984|ref|YP_001011065.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9515]
gi|123200350|gb|ABM71958.1| GcpE protein [Prochlorococcus marinus str. MIT 9515]
Length = 405
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 199/294 (67%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + +
Sbjct: 82 AKAVGDIKEKLIKSNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTK 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E++ I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDAEFETIKNTILKRFTPLVEVLKSKNKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMISDRLDAEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 LAAYRMISDRLDAEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ DALI+LIK+ G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVDALIRLIKEDG 400
Query: 733 RWAEP 737
+W +P
Sbjct: 401 KWIDP 405
>gi|78188327|ref|YP_378665.1| IspG protein [Chlorobium chlorochromatii CaD3]
gi|78170526|gb|ABB27622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
chlorochromatii CaD3]
Length = 688
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D A TVE+ R+ + G +++R+TV +++
Sbjct: 6 RRFTREVPFGKIALGGYQPIRVESMTNTHTMDTAATVEQCRRLYEAGCEIIRLTVPTEKD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I++ L + PLVADIHF+ A++ E + IR+NPGN+A + +F +Y
Sbjct: 66 AENLRAIRDQLRRDGITTPLVADIHFSVRAAMKAVEFVENIRINPGNYA-AKPKFSAEDY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T+ EYQ EL+H+ + F PLVEK + G ++RIGTNHGSLSDR++S YG+SP GMVE+A E
Sbjct: 125 TEAEYQAELEHVRQEFLPLVEKARSLGASMRIGTNHGSLSDRVVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGEGEDGR 323
FAR+C ++ +++ LFSMK+SN VM+QAYRLLVA+ + YPLHLGVTEAG+G++GR
Sbjct: 185 FARMCEEVGYYDLLFSMKSSNVRVMIQAYRLLVAKADAELRYAYPLHLGVTEAGDGDEGR 244
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 245 IKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 118/182 (64%), Gaps = 5/182 (2%)
Query: 560 RRLFEYLSENNLNFPVI--HHIQFPN--GIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
RRL + +E +L++P++ + ++PN +R + +I G L DG+GD L L
Sbjct: 507 RRLVQQFNEKSLHYPIVVRYRDEYPNDDNTNRLESLITIAVQTGTLFCDGIGDALALHTS 566
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
D + + ++N+LQG R+R +KTE++SCP CGRT FDL++ +A I+ + HL G+ I
Sbjct: 567 LSVDDEI-NLAYNILQGARIRMSKTEFISCPGCGRTYFDLEKATAAIKLRMGHLKGLKIG 625
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFGYVG +I LYVGK V+ + ++A D L LIK HG+W
Sbjct: 626 IMGCIVNGPGEMADADFGYVGAGKNRISLYVGKECVEENLPEDEAVDKLTMLIKAHGKWV 685
Query: 736 EP 737
+P
Sbjct: 686 DP 687
>gi|78212828|ref|YP_381607.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9605]
gi|123578218|sp|Q3AK30.1|ISPG_SYNSC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|78197287|gb|ABB35052.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. CC9605]
Length = 398
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 202/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+A+ G++
Sbjct: 6 RRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRLAEAGSE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +I+ L Q+ ++PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSMAHAKAMGQIRKELRQRGCSVPLVADVHHNGVKIALEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++ +E+ Q I E F PLV + +A+RIG NHGSL++R++ YG
Sbjct: 123 IFDKPDPNRQEFSPEEFAAIGQRIRETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EF RIC +LDFHN L SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPEGMVESAMEFVRICHELDFHNILISMKASRAPVMLAAYRLMADTMDKEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL DGLGDT+RVSLTE PEKEI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRIKSTAGIATLLADGLGDTLRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YVACP 307
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 18/207 (8%)
Query: 542 ILHDLPFNEDKIGR--------VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
I H+L F+ I + A R + + + + N+P+ H+ D I
Sbjct: 198 ICHELDFHNILISMKASRAPVMLAAYRLMADTMDKEGFNYPL--HLGVTEAGDGDYGRIK 255
Query: 594 AGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+ + LL DGLGD L L EAP ++ +++LQ +R T EYV+CPSCGR
Sbjct: 256 STAGIATLLADGLGDTLRVSLTEAPEKEIP----VCYSILQSLGLRKTMVEYVACPSCGR 311
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLF+L+E+ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 312 TLFNLEEVLHKVRNATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDE 371
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEP 737
+++ + + +ALIQLIK+ GRW EP
Sbjct: 372 IRK-VPEAEGVEALIQLIKEDGRWVEP 397
>gi|33861233|ref|NP_892794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|50400955|sp|Q7V215.1|ISPG_PROMP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33639965|emb|CAE19135.1| GcpE protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 405
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + + R+ + G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N + PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E++ + I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDAEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D I + +G LL +GLGD + L
Sbjct: 228 LAAYRMIADRLDAEGYNYPL--HLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R+ TSHL G+
Sbjct: 286 EAPEKEIPV----CYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRKATSHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ DALI+LIKD G
Sbjct: 342 DIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVDALIRLIKDDG 400
Query: 733 RWAEP 737
+W +P
Sbjct: 401 KWIDP 405
>gi|260435770|ref|ZP_05789740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8109]
gi|260413644|gb|EEX06940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8109]
Length = 409
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/311 (48%), Positives = 203/311 (65%), Gaps = 5/311 (1%)
Query: 68 PLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRI 127
P+ ++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+
Sbjct: 11 PMTALDRRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRL 67
Query: 128 ADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIR 186
A+ G+++VR+T A A +I+ L Q+ IPLVAD+H +AL VA+ DK+R
Sbjct: 68 AEAGSEIVRVTTPSMAHAKAMGQIRQELRQRGCTIPLVADVHHNGVKIALEVAQHVDKVR 127
Query: 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246
+NPG F + + E++ +E+ + I E F PLV + +A+RIG NHGSL++R
Sbjct: 128 INPGLFIFDKPDPNRQEFSPEEFASIGKRIRETFEPLVTLLRDQNKALRIGVNHGSLAER 187
Query: 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD 306
++ YGD+P GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++
Sbjct: 188 MLFTYGDTPEGMVESAMEFVRICHELDFHNIVISMKASRAPVMLAAYRLMADTMDKEGFN 247
Query: 307 YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
YPLHLGVTEAG+G+ GR+KS GI TLL DGLGDT+RVSLTE PEKEI C L +LG+
Sbjct: 248 YPLHLGVTEAGDGDYGRIKSTAGIATLLADGLGDTLRVSLTEAPEKEIPVCYSILQSLGL 307
Query: 366 RAAELQQGVAP 376
R ++ P
Sbjct: 308 RKTMVEYVACP 318
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 18/207 (8%)
Query: 542 ILHDLPFNEDKIGR--------VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
I H+L F+ I + A R + + + + N+P+ H+ D I
Sbjct: 209 ICHELDFHNIVISMKASRAPVMLAAYRLMADTMDKEGFNYPL--HLGVTEAGDGDYGRIK 266
Query: 594 AGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+ + LL DGLGD L L EAP ++ +++LQ +R T EYV+CPSCGR
Sbjct: 267 STAGIATLLADGLGDTLRVSLTEAPEKEIP----VCYSILQSLGLRKTMVEYVACPSCGR 322
Query: 651 TLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
TLF+L+E+ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 323 TLFNLEEVLHKVRNATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDE 382
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEP 737
+++ + + +ALIQLIK+ GRW EP
Sbjct: 383 IRK-VPEAEGVEALIQLIKEDGRWVEP 408
>gi|329956628|ref|ZP_08297201.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
clarus YIT 12056]
gi|328524000|gb|EGF51076.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
clarus YIT 12056]
Length = 599
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/265 (53%), Positives = 182/265 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L +
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGIKEAENLMNINAALRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E++ I
Sbjct: 61 DGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQEVRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC +F +
Sbjct: 121 DRFVPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEEFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLADIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+LA+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLAD 265
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 115/189 (60%), Gaps = 8/189 (4%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-E 613
R+ R L L L P++ + +DL I + ++GAL++DGL DG+ L
Sbjct: 411 RLGEYRGLAHQLMNEGLKNPLVFFQHYAE-TETEDLQIKSAADMGALIIDGLCDGIFLFN 469
Query: 614 APGQDFD------FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
G+ D T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I++ TS
Sbjct: 470 QSGEKGDKAISDKVTDATAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKQATS 529
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+L
Sbjct: 530 HLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIEL 589
Query: 728 IKDHGRWAE 736
IK +G + E
Sbjct: 590 IKKNGDYIE 598
>gi|167763736|ref|ZP_02435863.1| hypothetical protein BACSTE_02114 [Bacteroides stercoris ATCC
43183]
gi|167697852|gb|EDS14431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
stercoris ATCC 43183]
Length = 599
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 179/265 (67%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L Q
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINAALRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +EL+ I
Sbjct: 61 DGYMTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDSARTFKHLEYTDEEYAQELRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC F +
Sbjct: 121 DRFVPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEQFMDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLAHIMEKEGIHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLTD 265
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-E 613
R+ R L L L P++ + ++L I + ++GAL++DGL DG+ L
Sbjct: 411 RLGEYRALAHQLMNEGLKNPLVFFQHYAE-TETENLQIKSAADMGALIIDGLCDGIFLFN 469
Query: 614 APGQDFDFLRD------TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS 667
G++ D D T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I++ TS
Sbjct: 470 QTGKEGDKAIDDKVVDTTAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKQATS 529
Query: 668 HLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQL 727
HL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+L
Sbjct: 530 HLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEEEAVEKLIEL 589
Query: 728 IKDHGRWAE 736
I+ +G + E
Sbjct: 590 IRKNGDYTE 598
>gi|110598841|ref|ZP_01387097.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
ferrooxidans DSM 13031]
gi|110339549|gb|EAT58068.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
ferrooxidans DSM 13031]
Length = 679
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 199/278 (71%), Gaps = 6/278 (2%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G + +G P+RV++MT T D TV + R+ + G +++R+TV
Sbjct: 1 MYQYRRRLTREVPFGALVLGGYQPVRVESMTNTHTMDTVATVAQCRRLYEAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I++ L + PLVADIHF+P AL+ E + IRVNPGN+A R +F
Sbjct: 61 PTEKDAENLRNIRDQLRRDGIATPLVADIHFSPKAALKAVEFVENIRVNPGNYAAR-PKF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+++EY +E++H+ F+PLVEK +++G ++RIGTNHGSLSDRI+S +G+SP GMV
Sbjct: 120 SSDEYSEEEYLREIEHVRTEFTPLVEKARQFGVSMRIGTNHGSLSDRIVSRFGNSPEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM---YVHGWDYPLHLGVTEA 316
E+A EFAR C +L +++ LFSMKASN VM+QAYRLLV + H YPLHLGVTEA
Sbjct: 180 EAALEFARFCEELGYYDILFSMKASNVRVMIQAYRLLVEKADGELKHA--YPLHLGVTEA 237
Query: 317 GEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G+G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 238 GDGDEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
A+RRL + + +L++P+I + + R D +I G L DG+GD L L+ G
Sbjct: 501 ASRRLVQAFNSRSLDYPIIVRYR-ESASERLDSLISTSVQTGTLFCDGIGDMLALQT-GL 558
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIM 677
D + +FN+LQG R+R +KTE++SCP CGRT F+L++ +A I+++ +HL G+ I IM
Sbjct: 559 SVDDEVNLAFNILQGARVRMSKTEFISCPGCGRTYFELEQATAAIKKRMAHLKGLKIGIM 618
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GCIVNGPGEMADADFGYVG +I+LYVG+ V I+ + A D LI+L+K+ G+W +P
Sbjct: 619 GCIVNGPGEMADADFGYVGAGKNRINLYVGRECVDENISEQVAVDRLIELVKERGKWVDP 678
>gi|119356072|ref|YP_910716.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeobacteroides DSM 266]
gi|119353421|gb|ABL64292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeobacteroides DSM 266]
Length = 677
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D TV++ R+ + G +++R+TV +R+
Sbjct: 6 RRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTVPTERD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I++ L + PLVADIHF+ A + E + IR+NPGN+A ++ +F Y
Sbjct: 66 AENLRSIRDQLRSDGIDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQ-KFSAETY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TDDEYQ+E++ + + F PLV K +++G ++RIGTNHGSLSDRI+S YG+SP GMVE+A E
Sbjct: 125 TDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNHGSLSDRIVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGEGEDGR 323
FARIC + +H+ LFSMK+SN VM+QAYRLL + + YPLHLGVTEAG+G++GR
Sbjct: 185 FARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDGDEGR 244
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 245 VKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 2/178 (1%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDF 619
RRL ++ S+ ++P++ + + + D L I G+L DG+GD L L+ G D
Sbjct: 502 RRLVQFFSKRGFDYPLVIRFRQMDSVKLDCL-ISCAVQTGSLFSDGIGDVLALQT-GLDV 559
Query: 620 DFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGC 679
+FN+LQG R+R +KTE++SCP CGRT FDL++ +A I+ + SHL G+ + IMGC
Sbjct: 560 AAEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAASIKLRLSHLKGLKVGIMGC 619
Query: 680 IVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+VNGPGEMADADFGYVG G+I LYVGK V+ + A D L+ LI++ G+W P
Sbjct: 620 VVNGPGEMADADFGYVGSGKGRISLYVGKECVEENLPESAAVDRLVGLIQEKGKWVNP 677
>gi|189345737|ref|YP_001942266.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
limicola DSM 245]
gi|189339884|gb|ACD89287.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
limicola DSM 245]
Length = 679
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/274 (52%), Positives = 198/274 (72%), Gaps = 8/274 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D A +VE+ R+ D G +++R+TV +R+
Sbjct: 6 RRFTREVPFGPIALGGYLPIRVESMTNTHTFDTAASVEQCRRLHDAGCEIIRLTVPTERD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD +I++ L + + PLVADIHF+ A++ E + IR+NPGN+A R+ +F EY
Sbjct: 66 ADNLKQIRDQLRRDGIDTPLVADIHFSARAAMKAVEYVENIRINPGNYATRQ-KFSNNEY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T+ Y++EL + + F PLV + K+ G ++RIGTNHGSLSDRI+S YG+SP GMVE+A E
Sbjct: 125 TEAAYREELDVVRKEFLPLVSRAKELGVSMRIGTNHGSLSDRIVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLV----AEMYVHGWDYPLHLGVTEAGEGE 320
FARIC + +++ LFSMK+SN VM+QAYRLLV AE+ + YPLHLGVTEAG+G+
Sbjct: 185 FARICEEYGYYDLLFSMKSSNVRVMIQAYRLLVKRADAELR---YSYPLHLGVTEAGDGD 241
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 242 EGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 6/180 (3%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDL--VIGAGTNVGALLVDGLGDGLLLEAPGQ 617
R L +E ++P++ NG D L +I A G L DG+GD L LE
Sbjct: 503 RHLVREFNERGFDYPIVVRFNAHNG---DTLKTLIDASVQAGTLFCDGIGDILALETVLP 559
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIM 677
+ D +FN+LQG R+R +KTE++SCP CGRT FDL++ + I+++ HL G+ I IM
Sbjct: 560 ASAEI-DLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAATAIKQRLLHLKGLKIGIM 618
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GCIVNGPGEMADADFGYVG G+I LYVGK V+ + +A D LI+LI++ GRW +P
Sbjct: 619 GCIVNGPGEMADADFGYVGSGKGRISLYVGKDRVEDNLPEAEAVDRLIELIRERGRWVDP 678
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT-EAGEGEDGR 323
A R+ F +FS+ +S V + YR LV E G+DYP+ + G+
Sbjct: 477 LAEKLRERGFERIMFSISSSATVFV---YRHLVREFNERGFDYPIVVRFNAHNGDTLKTL 533
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEE---K 380
+ +++ GTL DG+GD + + P EID LA ++ A ++ F
Sbjct: 534 IDASVQAGTLFCDGIGDILALETVLPASAEID----LAFNILQGARIRMSKTEFISCPGC 589
Query: 381 HRHYFDFQR 389
R YFD ++
Sbjct: 590 GRTYFDLEK 598
>gi|229495691|ref|ZP_04389419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
endodontalis ATCC 35406]
gi|229317265|gb|EEN83170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
endodontalis ATCC 35406]
Length = 604
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 194/288 (67%), Gaps = 1/288 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T +V +G V +GSE+P+R+QTM T D + + R+A GAD +R T QG RE
Sbjct: 20 RRCTCSVSIGTVPLGSEYPLRIQTMANVSTPDTEAGIAQTERVALAGADYMRFTAQGVRE 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I+ +L +K Y+IPL+ADIHF P A + +K+R+NPGNFADR+ ++
Sbjct: 80 AECLQTIRATLDKKGYSIPLIADIHFNPQAAYEALKHVEKVRINPGNFADRKGEWSGESL 139
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D ++ + ++++F + + K+ RA+R+G NHGSLS+R++ YGD+P GMVES E
Sbjct: 140 SDADFAHGRERVQQLFGDFLREAKRLKRAIRLGVNHGSLSERMLRRYGDTPEGMVESCLE 199
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ R+ R LDF + + SMK+SN VM QA RLLV M G YPLH+GVTEAGEGEDGR+
Sbjct: 200 YLRVARSLDFEDIVISMKSSNVQVMTQAVRLLVERMDEMGVHYPLHIGVTEAGEGEDGRI 259
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQ 371
KSA+GIG+LL DGLGDT+RVSL+E PE E+ R L ++ RAA Q
Sbjct: 260 KSAVGIGSLLTDGLGDTLRVSLSEAPEAELPVARLLMEHIAERAAAPQ 307
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 120/187 (64%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV RR L+E + P+ QF + + I A T++G LL++G G ++L A
Sbjct: 410 RVGLWRRTIALLAEMGITAPIALEAQFAPHESLEKVQIAAATDLGTLLLEGAGSAIMLTA 469
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P L+ + +LQ R+R + TEY+SCP CGRTL++L+ A I++ TSHL + I
Sbjct: 470 PHLPLSSLQALALGILQATRLRFSHTEYISCPGCGRTLYNLEGTIARIKKATSHLSNLKI 529
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
IMGCIVNGPGEMADAD+GYVGGAP KIDLY G+ ++RGIA E A DALI LI+++G W
Sbjct: 530 GIMGCIVNGPGEMADADYGYVGGAPHKIDLYKGQKCMRRGIAEEDAVDALIALIRENGDW 589
Query: 735 AEPPAEE 741
EP E
Sbjct: 590 VEPKQRE 596
>gi|88808860|ref|ZP_01124369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7805]
gi|88786802|gb|EAR17960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7805]
Length = 411
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/319 (47%), Positives = 207/319 (64%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L AS+ Q+Y IH RR+TRTVMVG+V IGSEHP+ VQ+M DT D+ G
Sbjct: 5 LATASQTGNDTARSQRYDTVIH---RRRTRTVMVGDVPIGSEHPVAVQSMINEDTLDIEG 61
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
V + R+AD G ++VR+T A A +I+ +L + +PLVAD+H +AL V
Sbjct: 62 AVAGIRRLADAGCEIVRVTTPSMAHAKAMGDIRAALRSQGCGVPLVADVHHNGIRIALEV 121
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG F + ++ +++ +E+Q Q I++ F+PLVE K +A+RIG
Sbjct: 122 AKHVDKVRINPGLFVFDKPDPDRQDFSREEFQAIGQRIKDDFAPLVEVLKTQNKALRIGV 181
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF +C +LDFHN + SMKAS VM+ AYRL+
Sbjct: 182 NHGSLAERMLFTYGDTPEGMVESAMEFVHLCDELDFHNIVISMKASRAPVMLAAYRLMAD 241
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
+ G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 242 TLDREGFHYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCF 301
Query: 359 R-LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 302 SILQALGLRKTMVEYVACP 320
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L ++P+ H+ D I + + LL +GLGD + L
Sbjct: 233 LAAYRLMADTLDREGFHYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLT 290
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R+ TSHL G+
Sbjct: 291 EAPEKEIP----VCFSILQALGLRKTMVEYVACPSCGRTLFNLEEVLNQVRDATSHLTGL 346
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + + +ALIQ+IKD G
Sbjct: 347 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPETEGVEALIQIIKDDG 405
Query: 733 RWAEP 737
RW +P
Sbjct: 406 RWVDP 410
>gi|375254857|ref|YP_005014024.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
forsythia ATCC 43037]
gi|363407196|gb|AEW20882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
forsythia ATCC 43037]
Length = 609
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 183/278 (65%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V +GN +G +P+R+Q+M T D V + +R+A+ GA+ +R T QG+RE
Sbjct: 3 RRHTSVVTIGNTPLGGTNPVRIQSMADVSTMDTDAAVAQALRMAEAGAEYIRFTAQGERE 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I++ L +K PLVADIHF P A A +K+R+NPGN+ D +F +Y
Sbjct: 63 AHNLGLIRSKLREKGCETPLVADIHFNPKAAEVAAVHVEKVRINPGNYVDGVRKFRSTDY 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY LQ I + F P + C+K+ A+RIG NHGSLSDRIM+ YGD+P GMV S E
Sbjct: 123 TDEEYAAGLQKIRDRFIPFLRLCRKHRTAIRIGVNHGSLSDRIMNRYGDTPEGMVASCME 182
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F++ + S+KASN VVMV+ RLLV M YPLHLGVTEAG EDGR+
Sbjct: 183 FLRICKEEHFNDVVLSVKASNTVVMVRTVRLLVRMMEAEDMYYPLHLGVTEAGNDEDGRI 242
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS GIG LL DG+GDTIRVSL+EPPE EI R+L +
Sbjct: 243 KSVTGIGALLTDGIGDTIRVSLSEPPEAEIPVARKLVH 280
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
V AR L E P+I H + ++L I A ++G LL+DG+G+G+++ +
Sbjct: 407 VNEARAAVLRLKEAQSQTPLILHRHYKE-TDLENLQIKAAADLGVLLIDGIGNGVMITSD 465
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
G D +F +LQ R R ++TEY+SCP CGRTL++LQ + I+ TSHL G+ I
Sbjct: 466 GFDASVTDRLAFGILQAARARISRTEYISCPGCGRTLYNLQTTISRIKAATSHLTGLKIG 525
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDH 731
IMGCIVNGPGEMADAD+GYVG G+I LY GKT V + I E+A + L++LI ++
Sbjct: 526 IMGCIVNGPGEMADADYGYVGAGRGRISLYKGKTCVLKNIPEEEAVEQLLKLIAEN 581
>gi|33865708|ref|NP_897267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8102]
gi|50400949|sp|Q7U712.1|ISPG_SYNPX RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33632878|emb|CAE07689.1| GcpE protein [Synechococcus sp. WH 8102]
Length = 398
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 202/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+VAIGS+HP+ VQ+M DT D+ V ++R+A+ G++
Sbjct: 6 RRYDTQIH---RRITRTVMVGDVAIGSDHPVVVQSMINEDTLDIDAAVAGIVRLAEAGSE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ ++ + +PLVAD+H +A+ VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSMAHARAMGEIRAAVRARGCTVPLVADVHHNGVKIAMEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++D E+ I E F PLV + +A+RIG NHGSL++R++ YG
Sbjct: 123 VFDKPDPNRQEFSDKEFAAIGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPKGMVESAMEFVRICDELDFHNIVISMKASRAPVMLAAYRLMADTMDKEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL DGLGDTIRVSLTE PE+EI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRVKSTAGIATLLADGLGDTIRVSLTEAPEREIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YVACP 307
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + + N+P+ H+ D + + + LL DGLGD + L
Sbjct: 220 LAAYRLMADTMDKEGFNYPL--HLGVTEAGDGDYGRVKSTAGIATLLADGLGDTIRVSLT 277
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R+ TSHL G+
Sbjct: 278 EAPEREIP----VCYSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVRDATSHLTGL 333
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + E+ +ALIQLIK+ G
Sbjct: 334 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPEEEGVNALIQLIKEDG 392
Query: 733 RWAEP 737
RW EP
Sbjct: 393 RWVEP 397
>gi|194337669|ref|YP_002019463.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pelodictyon phaeoclathratiforme BU-1]
gi|194310146|gb|ACF44846.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pelodictyon phaeoclathratiforme BU-1]
Length = 688
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V+ GN A+G PIRV++MT T D A TVE+ R+ D G +++R+TV
Sbjct: 1 MYQYRRRLTREVVFGNRALGGYQPIRVESMTNTHTLDTAATVEQCRRLYDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+R+A+ I++ L + + PLVADIHF+ AL+ E + IR+NPGN+A + +F
Sbjct: 61 PTERDAENLRNIRDQLRRDGIDTPLVADIHFSVRAALKAVEFVENIRINPGNYATSQ-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+Y+++EY KEL H+ F+PLVEK ++ G ++RIGTNHGSLSDR++S YG+S GMV
Sbjct: 120 LNSDYSEEEYLKELDHVRLEFAPLVEKARQLGVSMRIGTNHGSLSDRVVSRYGNSAEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGE 318
E+A EFARI ++ + + LFSMK+SN VM+QAYRLLV + + YPLHLGVTEAG+
Sbjct: 180 EAALEFARISEEMGYFDILFSMKSSNVRVMIQAYRLLVEKADAELRYAYPLHLGVTEAGD 239
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 240 GDEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 113/180 (62%), Gaps = 2/180 (1%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDF 619
RRL E + L++P+I + R + +I + G L DG+GD L +
Sbjct: 508 RRLVEVFNRYALDYPLIVRFK-KESSDRLETLIDSSVQAGTLFCDGIGDMLAFHT-SLSW 565
Query: 620 DFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGC 679
D +FN+LQG R+R +KTE++SCP CGRT F+L++ +A I+++T HL G+ I IMGC
Sbjct: 566 DDEVQLAFNILQGARVRMSKTEFISCPGCGRTYFELEKATAAIKQRTVHLKGLKIGIMGC 625
Query: 680 IVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPA 739
IVNGPGEMADADFGYVG +I LYVGK V+ I+ A D LI LI++ G+W +PP
Sbjct: 626 IVNGPGEMADADFGYVGAGKNRISLYVGKECVEENISELDAVDRLIDLIRERGKWVDPPC 685
>gi|336397773|ref|ZP_08578573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multisaccharivorax DSM 17128]
gi|336067509|gb|EGN56143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multisaccharivorax DSM 17128]
Length = 619
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 197/285 (69%), Gaps = 1/285 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG + +G ++P+R+Q+MTT T D G++ + RI G +LVR+T QG RE
Sbjct: 8 RRETSVVHVGQIDMGGDNPVRIQSMTTTSTDDTEGSITQAERIIKAGGELVRLTTQGIRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PLVAD+HF P VA A +K+R+NPGN+ D +F + EY
Sbjct: 68 AENLKNISAGLRHDGFATPLVADVHFNPRVADVAALYAEKVRINPGNYVDPARKFIKHEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE P ++ CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 128 TDEEYAEELKKIEERLVPFLDICKEHHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K DF+N + S+K+SN VVMV++ RLLV M +PLHLGVTEAGEGEDGR+
Sbjct: 188 FLRICKKHDFNNVVISIKSSNTVVMVRSVRLLVETMEREDMHHPLHLGVTEAGEGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA 368
KSA+GIG LL DG+GDTIRVSLTE PE EI R L + +G +A
Sbjct: 248 KSAVGIGALLADGIGDTIRVSLTEEPEAEIPVARHLVDYIGHKAG 292
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 111/177 (62%), Gaps = 2/177 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ A R L + + PV+ Q +++ + + ++GAL++DGL DG+ L
Sbjct: 435 RLGAQRALVHEMMVAGVENPVVF-AQMYRLNDKEEFQLESAADMGALMMDGLCDGIWLMN 493
Query: 615 PGQDFDF-LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G + + DT+F +LQ R+R +KTEY+SCP CGRTL+DL++ I E T + G+
Sbjct: 494 DGNVAEADIEDTAFGILQAGRLRTSKTEYISCPGCGRTLYDLRDTIRRIHEATKDMKGLK 553
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
I IMGCIVNGPGEMADAD+GYVG PGKI LY GK V+ I +A + L++LIKD
Sbjct: 554 IGIMGCIVNGPGEMADADYGYVGAGPGKISLYKGKECVEHNIPECEAVEHLLKLIKD 610
>gi|21672988|ref|NP_661053.1| GcpE protein [Chlorobium tepidum TLS]
gi|50401066|sp|Q8KG23.1|ISPG_CHLTE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|21646050|gb|AAM71395.1| gcpE protein [Chlorobium tepidum TLS]
Length = 746
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y ++ RR TR V G + +G PIRV++M T T D A +VE+ R+ + G +++
Sbjct: 66 YPAPVYSYRRRVTREVPFGTIFLGGYLPIRVESMITAHTMDTAASVEQCRRLYEAGCEII 125
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TV +++A+ I+ L + + PLVADIHF+ A++ E + IR+NPGN+A
Sbjct: 126 RLTVPTEKDAENLKNIREQLRRDGIDTPLVADIHFSAKAAMKAVEFVENIRINPGNYATG 185
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
A+F +YTDDEY+ EL + E F+PLV K + G ++RIGTNHGSLSDRI+S YG+SP
Sbjct: 186 -AKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLSDRIVSRYGNSP 244
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVE+A EF+RIC +++ LFSMK+SN VM+QAYRLLVA + YPLHLGVT
Sbjct: 245 EGMVEAALEFSRICEDEGYYDQLFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVT 304
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 305 EAGDGDEGRIKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 344
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA--P 615
+ R+L L + L++P+ + +G R ++I + G L DG+GD + LE P
Sbjct: 568 STRKLALELKKAGLDYPIAVRYRRLDG-ERSGVLIQSAIQAGTLFCDGIGDLIALETNMP 626
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
+ L FN+LQ R+R +KTE++SCP CGRT F+L++ +A I+++ SHL G+ I
Sbjct: 627 ASEEVSL---CFNILQAARIRMSKTEFISCPGCGRTYFELEKTTALIKQRVSHLKGLKIG 683
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFGYVG G++ LYVGK V+ I +A + LI+LI+ +G+W
Sbjct: 684 IMGCIVNGPGEMADADFGYVGSGKGRVSLYVGKECVEENIPEAEALERLIELIRQNGKWV 743
Query: 736 EP 737
+P
Sbjct: 744 DP 745
>gi|148242561|ref|YP_001227718.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RCC307]
gi|147850871|emb|CAK28365.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RCC307]
Length = 410
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 193/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG++ IGSEHP+ VQ+M DT DV G ++R+ G ++VR+TV
Sbjct: 27 RRKTRSVRVGDIWIGSEHPVVVQSMINEDTLDVEGATAGILRLHQAGCEIVRLTVPSLAH 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L ++PLVAD+H +AL VA+ DK+R+NPG F + + E
Sbjct: 87 AKAVGEIRQRLEAAGASVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFDKPDPNRTE 146
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+T DE + I E F PLV K+ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 147 FTPDEVAAIGERITETFEPLVRSLKEQDKALRIGVNHGSLAERMLFSYGDTPLGMVESAL 206
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++YPLHLGVTEAG+G+ GR
Sbjct: 207 EFIRICDRLDFHNIVISMKASRAPVMLAAYRLMAHRMDAEGFNYPLHLGVTEAGDGDYGR 266
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DGLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 267 IKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYGILQSLGLRKTMVEYVACP 320
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 110/184 (59%), Gaps = 11/184 (5%)
Query: 558 AARRLFEY-LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLE 613
AA RL + + N+P+ H+ D I + + LL DGLGD + L E
Sbjct: 234 AAYRLMAHRMDAEGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLADGLGDTIRVSLTE 291
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
AP ++ + +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+
Sbjct: 292 APEKEIP----VCYGILQSLGLRKTMVEYVACPSCGRTLFNLEEVLQQVRSATDHLTGLD 347
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + ALI LIK+ GR
Sbjct: 348 IAVMGCIVNGPGEMADADYGYVGKTPGTISLYRGREEIRR-VPEAEGVQALIDLIKEDGR 406
Query: 734 WAEP 737
W +P
Sbjct: 407 WVDP 410
>gi|414076249|ref|YP_006995567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena sp.
90]
gi|413969665|gb|AFW93754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena sp.
90]
Length = 408
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 193/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V +G +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRAVQVGDVTVGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSIGH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+Q ++P+VAD+H +AL VA+ +K+R+NPG + +A + E
Sbjct: 85 AKALAEIKQKLIQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYIFEKANTSRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNVVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ +RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHVVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + Q + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKNPGYISLYRGRDEIKK-VPEAQGVEELINLIKADG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|86607013|ref|YP_475776.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-3-3Ab]
gi|123505309|sp|Q2JS69.1|ISPG_SYNJA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|86555555|gb|ABD00513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-3-3Ab]
Length = 412
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/283 (50%), Positives = 189/283 (66%), Gaps = 3/283 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+Q Y E ++ RR TRTV VGNV IGS+HP+ VQ+M DT D+ V + R+ + G+
Sbjct: 12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGS 69
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN 191
++VR+TV A A I++ L+Q +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 70 EIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGL 129
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + Q + EYT E + I E F+PLV+ K +A+RIG NHGSL++R++ Y
Sbjct: 130 FVLEKPQPGRTEYTQAELEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERMLFMY 189
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA E+A IC + DFHN + S KAS P VM+ AYRL G +YP HL
Sbjct: 190 GDTPEGMVESALEYAEICAEQDFHNVVLSFKASRPQVMLAAYRLAARRFDALGLNYPFHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+GE GR+KSA+GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 250 GVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEAPEKEI 292
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 114/184 (61%), Gaps = 14/184 (7%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
AARR F+ L LN+P H+ + I + +G LL +G+GD + L EA
Sbjct: 234 AARR-FDAL---GLNYPF--HLGVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ ++ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ I
Sbjct: 288 PEKEIP----VAYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY GK VK+ + + ALI+LIK GRW
Sbjct: 344 AVMGCIVNGPGEMADADYGYVGKTPGYISLYRGKEEVKK-VPESEGVQALIELIKADGRW 402
Query: 735 AEPP 738
+PP
Sbjct: 403 VDPP 406
>gi|116074926|ref|ZP_01472187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RS9916]
gi|116068148|gb|EAU73901.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RS9916]
Length = 406
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 200/305 (65%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGS HP+ VQ+M DT D+ V + R+AD G +
Sbjct: 14 RRYDTQIH---RRVTRTVMVGDVPIGSAHPVAVQSMINEDTLDIDAAVAGIRRLADAGCE 70
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ +L + N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 71 IVRVTTPSMAHAKAMGEIRAALRAQGCNVPLVADVHHNGIRIALEVAKHVDKVRINPGLF 130
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++ E+ Q I++ F PLVE K +A+RIG NHGSL++R++ +G
Sbjct: 131 VFDKPDPSRQEFSQSEFDAIGQRIKDDFRPLVELLKAENKALRIGVNHGSLAERMLFTHG 190
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ + G++YPLHLG
Sbjct: 191 DTPKGMVESAMEFVRICDELDFHNIVISMKASRAPVMLAAYRLMADTLDAEGFNYPLHLG 250
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 251 VTEAGDGDYGRVKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGLRKTMVE 310
Query: 372 QGVAP 376
P
Sbjct: 311 YVACP 315
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L N+P+ H+ D + + + LL +GLGD + L
Sbjct: 228 LAAYRLMADTLDAEGFNYPL--HLGVTEAGDGDYGRVKSTAGIATLLAEGLGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+
Sbjct: 286 EAPEKEIP----VCFSILQALGLRKTMVEYVACPSCGRTLFNLEEVLNQVRNATAHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + ++ +ALIQLIKD G
Sbjct: 342 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPEQEGVEALIQLIKDDG 400
Query: 733 RWAEP 737
RW EP
Sbjct: 401 RWVEP 405
>gi|427725899|ref|YP_007073176.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptolyngbya
sp. PCC 7376]
gi|427357619|gb|AFY40342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptolyngbya
sp. PCC 7376]
Length = 407
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G+V IGS+ P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 21 RRKTRPVKIGSVTIGSDFPVVVQSMINEDTLDIEGSVAGIRRLHEIGCEIVRVTVPSMAH 80
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A + +IK L +PLVAD+H +AL VA+ DK+R+NPG + + E++E
Sbjct: 81 AKSLAKIKEKLAATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFENSSDERIE 140
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+DDE++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 141 YSDDEFKAIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 200
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF IC+ LDFHN + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 201 EFIHICQDLDFHNLIISMKASRVPVMLAAYRLMARRMDELGMDYPLHLGVTEAGDGEYGR 260
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 261 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 314
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 131/222 (59%), Gaps = 17/222 (7%)
Query: 525 DESYEELEILKDIDATMILHDL--PFNEDKIGRVQAARRLF-EYLSENNLNFPVIHHIQF 581
+ + E + I +D+D H+L ++ + AA RL + E +++P+ H+
Sbjct: 197 ESALEFIHICQDLD----FHNLIISMKASRVPVMLAAYRLMARRMDELGMDYPL--HLGV 250
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
+ I + +G LL +G+GD + L EAP ++ +++LQ +R T
Sbjct: 251 TEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKT 306
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
EYV+CPSCGRTLF+L+E+ ++RE T+HL G+ IA+MGCIVNGPGEMADAD+GYVG
Sbjct: 307 MVEYVACPSCGRTLFNLEEVLHKVREATNHLTGLDIAVMGCIVNGPGEMADADYGYVGKT 366
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
PG I LY G+ +++ + +Q + LI LIK RW EPP E
Sbjct: 367 PGYISLYRGREEIRK-VPEDQGVEELINLIKSDDRWVEPPTE 407
>gi|193213530|ref|YP_001999483.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlorobaculum parvum NCIB 8327]
gi|193087007|gb|ACF12283.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlorobaculum parvum NCIB 8327]
Length = 694
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y ++ RR TR V G + +G PIRV++MT T D A TVE+ R+ + G +++
Sbjct: 14 YPVPVYSYRRRFTREVPFGRITLGGHQPIRVESMTNTHTMDTAATVEQCRRLYEAGCEII 73
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TV +R+A+ I++ L + + PLVADIHF+ A++ E + IR+NPGN+A
Sbjct: 74 RLTVPTERDAENLRNIRDQLRRDGIDTPLVADIHFSVKAAMKAVEFVENIRINPGNYATG 133
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
A+F +YTD++YQ EL + E F+PLV+K G ++RIGTNHGSLSDRI+S G+SP
Sbjct: 134 -AKFSSEDYTDEQYQAELDKVREEFTPLVKKAMSLGVSMRIGTNHGSLSDRIVSRLGNSP 192
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVE+A EFARI +++ LFSMK+SN VM+QAYRLLVA + YPLHLGVT
Sbjct: 193 EGMVEAALEFARISEDEGYYDILFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVT 252
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KSA+GIG+LL+DGLGDTIRVSLTE P E+
Sbjct: 253 EAGDGDEGRIKSAMGIGSLLEDGLGDTIRVSLTEDPVNEV 292
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
A R+L L + +++P++ + G R ++I + G L DG+GD L L+
Sbjct: 516 AVRKLALELKKAEIDYPLVVRYRRREG-ERSGVMIESAIQTGTLFCDGIGDILALDTKLS 574
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIM 677
D + FN+LQ R+R +KTE++SCP CGRT F+L++ +A I+++ SHL G+ I IM
Sbjct: 575 VTDEVA-LGFNILQAARIRMSKTEFISCPGCGRTYFELEKTTALIKQRVSHLKGLKIGIM 633
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GCIVNGPGEMADADFGYVG G+I LYVGK V+ + + A + LI+LI+ +G+W +P
Sbjct: 634 GCIVNGPGEMADADFGYVGSGKGRISLYVGKECVEENLPEDVALERLIELIRQNGKWVDP 693
>gi|170077366|ref|YP_001734004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7002]
gi|238054449|sp|B1XHZ7.1|ISPG_SYNP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|169885035|gb|ACA98748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7002]
Length = 406
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IGS++P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 18 TIH---RRKTRAVKVGNVTIGSDYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVT 74
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A + +IK L + +P+VAD+H +AL VA+ DK+R+NPG + +A
Sbjct: 75 VPSMAHARSLAQIKAKLAETYQAVPIVADVHHNGMKIALEVAKHVDKVRINPGLYVFEQA 134
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ YT+ E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 135 SGDRTGYTEAEFAAIGEKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 194
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC+ LDFHN + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 195 MVESALEFIRICQSLDFHNLIISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAG 254
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 255 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 314
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 10/184 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 229 AYRLMAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 286
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T+HL G+ I
Sbjct: 287 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATNHLTGLDI 342
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + Q + LI LIK GRW
Sbjct: 343 AVMGCIVNGPGEMADADYGYVGKTPGVISLYRGREEIRK-VPEAQGVEELINLIKADGRW 401
Query: 735 AEPP 738
+PP
Sbjct: 402 VDPP 405
>gi|254416093|ref|ZP_05029848.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Coleofasciculus chthonoplastes PCC 7420]
gi|196177026|gb|EDX72035.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Coleofasciculus chthonoplastes PCC 7420]
Length = 426
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 195/294 (66%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 43 RRQTRPVSVGNITIGGGHPVVVQSMINEDTLDLEGSVAGIRRLHEIGCEIVRVTVPSMAH 102
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L+Q +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 103 AKALAQIKQKLIQTYQEVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSDRTE 162
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ I+E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 163 YTQAEFEQIGAKIKETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 222
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 223 EFIRICESLDFRNLVISLKASRVPVMLAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 282
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 283 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 336
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 251 AYRLMVRRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 308
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T HL G+ I
Sbjct: 309 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATKHLTGLDI 364
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q + LI LIK RW
Sbjct: 365 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEIKK-VPEDQGVEELINLIKADDRW 423
Query: 735 AEP 737
+P
Sbjct: 424 IDP 426
>gi|148239811|ref|YP_001225198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7803]
gi|147848350|emb|CAK23901.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7803]
Length = 411
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 207/319 (64%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L AS+ Q+Y IH RR+TRTVMVG+V IGSEHP+ VQ+M DT D+ G
Sbjct: 5 LATASQTGNDTARNQRYDTVIH---RRRTRTVMVGDVPIGSEHPVAVQSMINEDTLDIEG 61
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
V + R+AD G ++VR+T A A +I+ +L + +PLVAD+H +AL V
Sbjct: 62 AVAGIRRLADAGCEIVRVTTPSMAHAKAMGDIRAALRAQGCGVPLVADVHHNGIRIALEV 121
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG F + + +++ +E++ + I++ F+PLVE K +A+RIG
Sbjct: 122 AKHVDKVRINPGLFVFDKPDPGRQDFSREEFEAIGRRIKDDFAPLVEVLKTQNKALRIGV 181
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF R+C +LDFHN + SMKAS VM+ AYRL+
Sbjct: 182 NHGSLAERMLFTYGDTPEGMVESAMEFVRLCDELDFHNIVISMKASRAPVMLAAYRLMAD 241
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
+ G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 242 TLDREGFHYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCF 301
Query: 359 R-LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 302 SILQALGLRKTMVEYVACP 320
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L ++P+ H+ D I + + LL +GLGD + L
Sbjct: 233 LAAYRLMADTLDREGFHYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLT 290
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R+ TSHL G+
Sbjct: 291 EAPEKEIP----VCFSILQALGLRKTMVEYVACPSCGRTLFNLEEVLNQVRDATSHLTGL 346
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + + +ALIQLIKD G
Sbjct: 347 DIAVMGCIVNGPGEMADADYGYVGKTPGIISLYRGREEIRK-VPETEGVEALIQLIKDDG 405
Query: 733 RWAEP 737
RW +P
Sbjct: 406 RWVDP 410
>gi|87125792|ref|ZP_01081635.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. RS9917]
gi|86166601|gb|EAQ67865.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. RS9917]
Length = 403
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 196/305 (64%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHP+ VQ+M DT D+ V + R+AD G +
Sbjct: 11 RRYDTQIH---RRVTRTVMVGDVPIGSEHPVVVQSMINEDTLDIEAAVAGIRRLADAGCE 67
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ +L + +PLVAD+H +AL VA DK+R+NPG F
Sbjct: 68 IVRVTTPSMAHAKAMKEIRAALRSQGCGVPLVADVHHNGIRIALEVANHVDKVRINPGLF 127
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T E+ I + F+PLVE K +A+RIG NHGSL++R++ YG
Sbjct: 128 VFDKPDPSRQEFTQAEFDAIGARIRDDFAPLVEVLKAQNKALRIGVNHGSLAERMLFTYG 187
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF R+C LDFHN + SMKAS VM+ AYRL+ M G+ YPLHLG
Sbjct: 188 DTPKGMVESAMEFVRLCDALDFHNIVISMKASRAPVMLAAYRLMADTMDAEGFRYPLHLG 247
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 248 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGLRKTMVE 307
Query: 372 QGVAP 376
P
Sbjct: 308 YVACP 312
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + +P+ H+ D I + + LL +GLGD + L
Sbjct: 225 LAAYRLMADTMDAEGFRYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLT 282
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R TSHL G+
Sbjct: 283 EAPEKEIP----VCFSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVRSATSHLTGL 338
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + + +ALIQLIKD G
Sbjct: 339 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPESEGVEALIQLIKDDG 397
Query: 733 RWAEP 737
RW EP
Sbjct: 398 RWVEP 402
>gi|428310685|ref|YP_007121662.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Microcoleus sp. PCC 7113]
gi|428252297|gb|AFZ18256.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Microcoleus sp. PCC 7113]
Length = 405
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 195/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGN+ IG +P+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRPVKVGNITIGGGYPVVVQSMINEDTLDVEGSVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L+Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHAKALAEIKQKLIQTYQEVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KADRNEYTQAEFEEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIRICESLDFRNIVISLKASRAPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGLAPLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 228 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGLAPLLADGIGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 286 EAPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK G
Sbjct: 342 DIAVMGCIVNGPGEMADADYGYVGKQAGFISLYRGREEIKK-VPEDQGVEELINLIKADG 400
Query: 733 RWAEP 737
RW +P
Sbjct: 401 RWVDP 405
>gi|209523493|ref|ZP_03272048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira maxima CS-328]
gi|376006324|ref|ZP_09783605.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira sp. PCC 8005]
gi|423064688|ref|ZP_17053478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis C1]
gi|209496235|gb|EDZ96535.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira maxima CS-328]
gi|375325215|emb|CCE19358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira sp. PCC 8005]
gi|406713931|gb|EKD09099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis C1]
Length = 405
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 22 RRQTRPVRVGNITIGGGYPVVVQSMINEDTMDIEGSVASIRRLHEMGCEIVRVTVPSVGH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 82 AKAVGEIKQKLAATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKGDRSE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+Q+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 142 YTDTEFQEIGEKIRETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 202 EFIRICESLDFQNLVISLKASRVPVMLAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 315
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 99/149 (66%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 262 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPV----CYSILQSLGLRKTMVEYVACPSC 317
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 318 GRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR 377
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + +Q + LI LIK GRW EP
Sbjct: 378 EEIKK-VPEDQGVEELINLIKADGRWVEP 405
>gi|443323667|ref|ZP_21052671.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gloeocapsa
sp. PCC 73106]
gi|442786649|gb|ELR96378.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gloeocapsa
sp. PCC 73106]
Length = 406
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG++ IG +P+ VQ+M DT ++ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVKVGDITIGGSYPVVVQSMINEDTLNIEGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L++ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHAKALAEIKEKLIKTYKYVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EYT+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KANRTEYTESEFSEIGEQIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC+ LDFHN + S+KA+ VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICQSLDFHNLVISLKAARVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LGMR ++ P
Sbjct: 257 DGEYGRIKSTTGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGMRKTMVEYVACP 316
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + T +G LL +G+GD + L EA
Sbjct: 231 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTTGIGTLLAEGIGDTIRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ MR T EYV+CPSCGRTLF+L+++ ++RE T HL G+ I
Sbjct: 289 PEKEIPV----CYSILQALGMRKTMVEYVACPSCGRTLFNLEDVLHQVREATKHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY GK +K+ + Q LI LIK GRW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKQAGYISLYRGKEEIKK-VPESQGVQELISLIKADGRW 403
Query: 735 AEP 737
+P
Sbjct: 404 IDP 406
>gi|78187812|ref|YP_375855.1| IspG protein [Chlorobium luteolum DSM 273]
gi|78167714|gb|ABB24812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
luteolum DSM 273]
Length = 688
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 195/278 (70%), Gaps = 6/278 (2%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G +++G PIRV++M T D +VE+ R+ D G +++R+TV
Sbjct: 1 MYEYRRRLTREVPFGPISLGGYLPIRVESMLNTHTSDTRASVEQCRRLHDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I++ L + PLVADIHF+ A++ E + IR+NPGN+A R+ +F
Sbjct: 61 PTEKDAENLRAIRDQLRRDGIRTPLVADIHFSARAAMKAVEFVENIRINPGNYATRK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+YT+DEYQ+EL H+ + F PLVEK + G ++RIGTNHGSLSDRI+S G+SP GMV
Sbjct: 120 SNGDYTEDEYQQELLHVRQEFLPLVEKARSLGVSMRIGTNHGSLSDRIVSRRGNSPDGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM---YVHGWDYPLHLGVTEA 316
E+A EFARIC +++ LFSMK+SN VM+QAYRLLV +H YPLHLGVTEA
Sbjct: 180 EAALEFARICEDAGYYDILFSMKSSNVRVMIQAYRLLVQRADKELLHA--YPLHLGVTEA 237
Query: 317 GEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G+G++ R+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 238 GDGDEARVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
AARRL ++ PV + + R +I A G L DGLGD L L+ P
Sbjct: 505 AARRLALEFRRRSIRAPVSVRFSGSDPL-RLSTIIDASVQAGPLFSDGLGDMLSLQTPLS 563
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIM 677
D + FN+LQG R R +KTE++SCP CGRT FDL+ +A I+ + SHL G+ I IM
Sbjct: 564 AEDEI-SLGFNILQGARARMSKTEFISCPGCGRTYFDLERAAASIKTRLSHLKGLKIGIM 622
Query: 678 GCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
GC+VNGPGEMADADFGYVG +I LYVGK V + +A D LI LI++HGRW EP
Sbjct: 623 GCVVNGPGEMADADFGYVGAGKNRISLYVGKECVAENLPEVEAVDRLIDLIREHGRWVEP 682
Query: 738 PA 739
A
Sbjct: 683 SA 684
>gi|194333124|ref|YP_002014984.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Prosthecochloris aestuarii DSM 271]
gi|194310942|gb|ACF45337.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Prosthecochloris aestuarii DSM 271]
Length = 677
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 198/276 (71%), Gaps = 2/276 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V GN+++G PIRV++MTT T D A +VE+ R+ + G +++R+TV
Sbjct: 1 MYQYHRRLTREVGFGNISLGGYQPIRVESMTTTHTMDTAASVEQCRRLYEAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I+ L + PLVADIHF+ A++ E D IR+NPGN+A+R+ +F
Sbjct: 61 PTEKDAENLKYIREQLRRDGIETPLVADIHFSRKAAMKAVEYVDNIRINPGNYANRK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+D ++Q EL+ + + F PL+ K +++G ++RIGTNHGSLSDRI+S YG++P GMV
Sbjct: 120 SNPEYSDADFQAELEKVRDEFIPLIAKAREFGVSMRIGTNHGSLSDRIVSRYGNTPEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVTEAGE 318
E+A EFARIC + LFSMK+SN VM++AYR+LV + + YPLHLGVTEAG+
Sbjct: 180 EAALEFARICESEGYEEILFSMKSSNVRVMIEAYRMLVVKSDAQLRNAYPLHLGVTEAGD 239
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G++GR+KS++GIG LL++GLGDTIRVSLTE P E+
Sbjct: 240 GDEGRIKSSMGIGALLEEGLGDTIRVSLTEDPVNEV 275
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 5/209 (2%)
Query: 532 EILKDIDATMI---LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
E+L I M + + F+ + V A RRL + S + ++ PVI + + R
Sbjct: 470 EVLAHIARAMAGRGVRRMMFSIESAEAVYAYRRLLQRFSASGIDAPVIIRYRGDDA-DRL 528
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+I + G+L DG+GD + LE G + D +FN+LQ R+R +KTE++SCP C
Sbjct: 529 STLIESSIQTGSLFCDGIGDMIALET-GLEADDELALAFNILQAARVRMSKTEFISCPGC 587
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRT F+L++ + I+ K +HL G+ I IMGCIVNGPGEMADADFGYVG G++ LYVGK
Sbjct: 588 GRTYFELEKTAGMIKSKMAHLKGLKIGIMGCIVNGPGEMADADFGYVGAGKGRVCLYVGK 647
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
V I A + LI L+K GRW +P
Sbjct: 648 ECVAPNIPERDAVEKLIDLVKSRGRWVDP 676
>gi|409993502|ref|ZP_11276641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis str. Paraca]
gi|291566342|dbj|BAI88614.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis NIES-39]
gi|409935650|gb|EKN77175.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis str. Paraca]
Length = 406
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRQTRPVRVGNITIGGGYPVVVQSMINEDTMDIEGSVASIRRLHEMGCEIVRVTVPSVGH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKAVGEIKQKLAATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSDRSE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+Q+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDTEFQEIGEKIRETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIRICESLDFQNLVISLKASRVPVMLAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 263 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVEYVACPSC 318
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 319 GRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR 378
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + +Q LI LIK GRW +P
Sbjct: 379 EEIKK-VPQDQGVQELINLIKGDGRWVDP 406
>gi|428776582|ref|YP_007168369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halothece sp.
PCC 7418]
gi|428690861|gb|AFZ44155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halothece sp.
PCC 7418]
Length = 403
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 198/300 (66%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 16 TIH---RRKTRPVPVGDVTIGGGHPVVVQSMINEDTLDIEGSVNGIRRLHEIGCEIVRVT 72
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 73 VPSMAHARALADIKTRLQETYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 132
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 133 KTDRTEYSQAEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 192
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC L+FHN + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 193 MVESALEFIKICESLNFHNLIISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 252
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTEPPEKEI C L +LG+R ++ P
Sbjct: 253 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEPPEKEIPVCYSILQSLGLRKTMVEYVACP 312
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L E
Sbjct: 227 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEP 284
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+ I
Sbjct: 285 PEKEIPV----CYSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLEKVRAATNHLTGLDI 340
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + E+ + LI LIK+ GRW
Sbjct: 341 AVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPEEKGVEELINLIKEDGRW 399
Query: 735 AEP 737
+P
Sbjct: 400 VDP 402
>gi|86607623|ref|YP_476385.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|123504173|sp|Q2JPZ9.1|ISPG_SYNJB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|86556165|gb|ABD01122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 409
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/283 (50%), Positives = 189/283 (66%), Gaps = 3/283 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+Q Y E ++ RR TRTV V +V IGS+HP+ VQ+M DT DV V + R+ + G+
Sbjct: 12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGS 69
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN 191
++VR+TV A A I+ L+Q +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 70 EIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGL 129
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + Q + EYT E++ I E F+PLV+ K +A+RIG NHGSL++R++ Y
Sbjct: 130 FVFEKPQPGRTEYTQAEFEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERMLFTY 189
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA EFA+IC + DFHN + S KAS P VM+ AYRL G +YP HL
Sbjct: 190 GDTPEGMVESALEFAQICAEQDFHNVVLSFKASRPQVMLAAYRLAARRFDALGLNYPFHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+GE GR+KSA+GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 250 GVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEAPEKEI 292
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 114/185 (61%), Gaps = 14/185 (7%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
AARR F+ L LN+P H+ + I + +G LL +G+GD + L EA
Sbjct: 234 AARR-FDAL---GLNYPF--HLGVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ ++ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ I
Sbjct: 288 PEKEIP----VAYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY GK VKR + + ALI LIK GRW
Sbjct: 344 AVMGCIVNGPGEMADADYGYVGKTPGVISLYRGKEEVKR-VPESEGVQALIDLIKADGRW 402
Query: 735 AEPPA 739
+PP+
Sbjct: 403 VDPPS 407
>gi|428220313|ref|YP_007104483.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 7502]
gi|427993653|gb|AFY72348.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 7502]
Length = 412
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D++G++ + R+ + G ++VR+TV
Sbjct: 29 RRKTRPVKVGSVTIGGNNPVVVQSMINEDTLDISGSIAGIRRLHEIGCEIVRVTVPSLAH 88
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L++ N+P+VAD+H +AL VA+ DK+R+NPG + + + + E
Sbjct: 89 AHALAEIRAGLIRTYQNVPIVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKPNRTE 148
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+Q+ I E SPLV + G+A+RIG NHGSL++R++ YGD+P+GMVESA
Sbjct: 149 YTASEFQEIGDKIAETLSPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPQGMVESAI 208
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VMV AY+L+V M G DYPLHLGVTEAG+GE GR
Sbjct: 209 EFIRICESLDFRNLVISLKASRVPVMVAAYKLMVKRMDELGMDYPLHLGVTEAGDGEYGR 268
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 269 IKSTAGIATLLSQGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 322
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A + + + + E +++P+ H+ + I + + LL G+GD + L
Sbjct: 235 VAAYKLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLSQGIGDTIRVSLT 292
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 293 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 348
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY GK +K+ ++ ++ LI LIK
Sbjct: 349 DIAVMGCIVNGPGEMADADYGYVGKTPGMISLYRGKEEIKKVPEVDGVSE-LIALIKSDD 407
Query: 733 RWAEP 737
RW +P
Sbjct: 408 RWVDP 412
>gi|428773373|ref|YP_007165161.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium stanieri PCC 7202]
gi|428687652|gb|AFZ47512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium stanieri PCC 7202]
Length = 405
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRAVKVGNVTIGGNNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHARALAEIKQKLADTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT+ E+++ I+E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KGDRTEYTETEFKEIGAKIKETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF N + S+KAS VM+ AYRL+V +M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIKICESLDFKNLIISLKASRVPVMLSAYRLMVKKMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 228 LSAYRLMVKKMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 286 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + EQ + LIQLIKD G
Sbjct: 342 DIAVMGCIVNGPGEMADADYGYVGRQPGFISLYRGREEIRK-VPEEQGVEQLIQLIKDDG 400
Query: 733 RWAEP 737
RW +P
Sbjct: 401 RWVDP 405
>gi|354568651|ref|ZP_08987814.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fischerella
sp. JSC-11]
gi|353539905|gb|EHC09385.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fischerella
sp. JSC-11]
Length = 408
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG HP+ VQ+M DT DV G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGHPVVVQSMINEDTLDVDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNPNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMV+SA
Sbjct: 145 YTKVEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVQSAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISLKASRVPVMIAAYRLMVQRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 IAAYRLMVQRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
E+P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 ESPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + E + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEEHGVEELINLIKADG 403
Query: 733 RWAEP 737
RW EP
Sbjct: 404 RWVEP 408
>gi|17229993|ref|NP_486541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7120]
gi|20138560|sp|P58666.1|ISPG_ANASP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|17131593|dbj|BAB74200.1| all2501 [Nostoc sp. PCC 7120]
Length = 408
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRESTKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + ++ + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDKGVEELINLIKADG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|434395313|ref|YP_007130260.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeocapsa
sp. PCC 7428]
gi|428267154|gb|AFZ33100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeocapsa
sp. PCC 7428]
Length = 408
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 22 TIH---RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDVDGSVAAIRRLHEIGCEIVRVT 78
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 79 VPSMAHAKALAEIKQKLHQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 138
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 139 KTDRTEYTQAEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 198
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 199 MVESALEFIRICESLDFRNLVVSLKASRVPVMLAAYRLMAQRMDELGMDYPLHLGVTEAG 258
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 259 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 233 AYRLMAQRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 290
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 291 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 346
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + Q + LI LIK GRW
Sbjct: 347 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRDEIKR-VPEAQGVEELINLIKADGRW 405
Query: 735 AEP 737
EP
Sbjct: 406 VEP 408
>gi|440681630|ref|YP_007156425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
cylindrica PCC 7122]
gi|428678749|gb|AFZ57515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
cylindrica PCC 7122]
Length = 408
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTSRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKAEFDEIGEKISETLAPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNLVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ +RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHTVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + Q + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEAQGVEELINLIKADG 403
Query: 733 RWAEP 737
RW EP
Sbjct: 404 RWVEP 408
>gi|428781121|ref|YP_007172907.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dactylococcopsis salina PCC 8305]
gi|428695400|gb|AFZ51550.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dactylococcopsis salina PCC 8305]
Length = 407
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RR+TR V VGNV IG HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRQTRPVPVGNVTIGGGHPVVVQSMINEDTLDVEGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHGRALADIKARLQETYQPVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT+ E+ + Q I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KPDRTEYTEAEFNEIGQKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LD+ N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLDYRNLIISLKASRVPVMLAAYRLMVKRMDDLGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTEPPEKEI C L +LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEPPEKEIPVCYSILQSLGLRKTMVEYVACP 316
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LL +G+GD + L E P ++ +++LQ +R T EYV+CPSC
Sbjct: 263 IKSTAGIGTLLAEGIGDTIRVSLTEPPEKEIPV----CYSILQSLGLRKTMVEYVACPSC 318
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+
Sbjct: 319 GRTLFNLEEVLEKVRAATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGR 378
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+KR + E+ + LI LIK GRW +P
Sbjct: 379 EEIKR-VPEEKGVEELINLIKADGRWVDP 406
>gi|75906658|ref|YP_320954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
variabilis ATCC 29413]
gi|123610732|sp|Q3MG27.1|ISPG_ANAVT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|75700383|gb|ABA20059.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
variabilis ATCC 29413]
Length = 408
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKLITTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRESTKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + ++ + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDKGVEELINLIKADG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|159903331|ref|YP_001550675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9211]
gi|159888507|gb|ABX08721.1| GcpE protein [Prochlorococcus marinus str. MIT 9211]
Length = 412
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/283 (50%), Positives = 191/283 (67%), Gaps = 6/283 (2%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG++ IGS HP+ VQ+M DT D+ + + R+ + G +
Sbjct: 16 RRYSTQIH---RRPTRTVMVGDIPIGSAHPVSVQSMINEDTLDIEASTAAIRRLHEIGCE 72
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHF-APSVALRVAECFDKIRVNPGN 191
+VR+TV A A EIK L ++NY +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 73 IVRLTVPSLSHAKAVGEIKQKL-ERNYKPVPLVADVHHNGMKIALEVAKHVDKVRINPGL 131
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + E++++E Q + I F P+V K +A+RIG NHGSL++R++ Y
Sbjct: 132 FVFETPDPNRTEFSEEEMQLIKEKIVSKFEPIVNTLKAQNKALRIGVNHGSLAERMLFAY 191
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA EF RIC LDFHN + SMKAS P VM+ AYR++ M G++YPLHL
Sbjct: 192 GDTPLGMVESAMEFVRICDSLDFHNIVISMKASRPPVMLAAYRMMADRMDKEGFNYPLHL 251
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 252 GVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 294
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + + N+P+ H+ D I + +G LL +G+GD + L
Sbjct: 230 LAAYRMMADRMDKEGFNYPL--HLGVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLT 287
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ ++++LQ +R T EY+SCPSCGRTLF+L+E+ A++R+ TSHL G+
Sbjct: 288 EAPEKEIP----VAYSILQTVGLRKTMVEYISCPSCGRTLFNLEEVVAKVRDATSHLTGL 343
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +++ + E AL+ LIK G
Sbjct: 344 DIAVMGCIVNGPGEMADADYGYVGKGKGVIALYRGRDEIRK-VPEEDGVSALVDLIKQDG 402
Query: 733 RWAEP 737
+W EP
Sbjct: 403 KWLEP 407
>gi|282896992|ref|ZP_06304994.1| IspG protein [Raphidiopsis brookii D9]
gi|281197644|gb|EFA72538.1| IspG protein [Raphidiopsis brookii D9]
Length = 391
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V V R+ + G ++VR+TV
Sbjct: 25 RRKTRAVKVGDVIIGGGYPVVVQSMINEDTLDIDGSVSAVRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + ++ E
Sbjct: 85 AKALAEIKQKLQQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNSDRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F+N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLNFYNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAP 699
IA+MGCIVNGPGEMADAD+GYVG P
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKIP 371
>gi|300868031|ref|ZP_07112669.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
sp. PCC 6506]
gi|300333951|emb|CBN57847.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
sp. PCC 6506]
Length = 406
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +PI VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRKTRPVKVGSVTIGGGYPIVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKALAEIKQKLHATYQVVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRSE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT DE+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTPDEFDEIGAKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDF N + SMKAS VM+ AYRL+ M HG DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIKICESLDFRNIVISMKASRVPVMLAAYRLMARRMDEHGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DGLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 13/217 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF-EYLSENNLNFPVIHHIQFPN 583
+ + E ++I + +D I+ + ++ + AA RL + E+ +++P+ H+
Sbjct: 199 ESALEFIKICESLDFRNIV--ISMKASRVPVMLAAYRLMARRMDEHGMDYPL--HLGVTE 254
Query: 584 GIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKT 640
+ I + + LL DGLGD + L EAP ++ +++LQ +R T
Sbjct: 255 AGDGEYGRIKSTAGIATLLADGLGDTIRVSLTEAPEKEIP----VCYSILQALGLRKTMV 310
Query: 641 EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 700
EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G
Sbjct: 311 EYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAG 370
Query: 701 KIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I LY G+ +KR + ++ + LI LIK RW +P
Sbjct: 371 YISLYRGREEIKR-VPEDRGVEELINLIKSDDRWVDP 406
>gi|427705975|ref|YP_007048352.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7107]
gi|427358480|gb|AFY41202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7107]
Length = 408
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGHPVVVQSMINEDTLDIDGSVAAIRRLHEVGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK +++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKIIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGDKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRLL M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVVSMKASRVPVMVAAYRLLAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PE EI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACP 318
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R L + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLLAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP + +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPENEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + + + LI+LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPETEGVEELIRLIKTDG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|124025441|ref|YP_001014557.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL1A]
gi|123960509|gb|ABM75292.1| GcpE [Prochlorococcus marinus str. NATL1A]
Length = 407
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 196/299 (65%), Gaps = 7/299 (2%)
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
IA L+ EG+ L Q+Y I +RR TR VMVG++ IG ++P+RVQ+M DT D
Sbjct: 2 IATLEKNMEGNNL---SQRYSTRI---IRRDTRPVMVGDIGIGGDNPVRVQSMINEDTMD 55
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175
+ G+ + R+ + G ++VR+TV A A EIK L +PLVAD+H +A
Sbjct: 56 IEGSTAAIRRLHEVGCEIVRLTVPTLASAKAVGEIKKLLASTYQPVPLVADVHHNGMKIA 115
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
L VA+ DK+R+NPG F + + E+T DE + I + F P+V K+ +A+R
Sbjct: 116 LEVAKHVDKVRINPGLFVFEKPDPNRTEFTKDEIDVIKEKIIQKFKPIVNTLKEQNKALR 175
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IG NHGSLS+R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ AYR+
Sbjct: 176 IGVNHGSLSERMLFAYGDTPFGMVESAMEFIRICHSLDFHNIVISMKASRAPVMLAAYRM 235
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+ M G++YPLHLGVTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 236 MADTMDKEGFNYPLHLGVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 294
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + N+P+ H+ D I + +G LL +G+GD + L EA
Sbjct: 232 AYRMMADTMDKEGFNYPL--HLGVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEA 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ ++++LQ +R T EY+SCPSCGRTLF+L+E+ A +R+ T HL G+ I
Sbjct: 290 PEKEIP----VAYSILQAVGLRKTMVEYISCPSCGRTLFNLEEVVARVRDATQHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY + +KR + ++ AL+ LIK+ G+W
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKGVGTIALYRNRDEIKR-VPEDEGVQALVDLIKEDGKW 404
Query: 735 AEP 737
+P
Sbjct: 405 VDP 407
>gi|428770151|ref|YP_007161941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium aponinum PCC 10605]
gi|428684430|gb|AFZ53897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium aponinum PCC 10605]
Length = 405
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 195/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV +G +P+ VQ+M DT DV +V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRPVKVGNVTVGGNNPVVVQSMINEDTLDVDASVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSLAHAKAVGEIKAKLAQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ Y+ +E+ + + I+E PLV ++ G+A+RIG NHGSLS+R++ YGD+P G
Sbjct: 136 SSDRTSYSAEEFAQIGEKIKETLEPLVVSLREQGKAMRIGVNHGSLSERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIKICESLDFRNLVISMKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 230 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 288 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + + LI LIK G+W
Sbjct: 344 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEIKK-VPETEGVKELINLIKADGKW 402
Query: 735 AEP 737
+P
Sbjct: 403 VDP 405
>gi|428297590|ref|YP_007135896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 6303]
gi|428234134|gb|AFY99923.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 6303]
Length = 408
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDITIGGGYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLKQTYKDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPSTTRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTPAEFAEIGEKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDFHN + SMKAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIKICESLDFHNIVISMKASRVPVMVAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLTDGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMVRRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLTDGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGRDEIKK-VPENMGVEELINLIKADG 403
Query: 733 RWAEP 737
RW EP
Sbjct: 404 RWVEP 408
>gi|119489558|ref|ZP_01622318.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Lyngbya sp.
PCC 8106]
gi|119454470|gb|EAW35618.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Lyngbya sp.
PCC 8106]
Length = 406
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 193/297 (64%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RR+TR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 KIHRRQTRPVQVGDVTIGGGHPVVVQSMINEDTMDIDGSVAGIRRLHEIGCEIVRVTVPS 79
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + + + +
Sbjct: 80 VGHAKAVGEIKQKLAQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSD 139
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + + I E PLV ++ G+A+RIG NHGSL++R++ YGD+P GMVE
Sbjct: 140 RNEYTQAEFDEIGEKIRETLEPLVVSLREQGKAMRIGVNHGSLAERMLFTYGDTPEGMVE 199
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE
Sbjct: 200 SALEFIRICESLDFQNLVISLKASRVPVMLAAYRLMAQRMDELGMDYPLHLGVTEAGDGE 259
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 260 YGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 115/183 (62%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 231 AYRLMAQRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T+HL G+ I
Sbjct: 289 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATNHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ VK+ + +Q + LI LIK GRW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEVKK-VPEDQGVEELINLIKADGRW 403
Query: 735 AEP 737
+P
Sbjct: 404 IDP 406
>gi|67925456|ref|ZP_00518798.1| IspG protein [Crocosphaera watsonii WH 8501]
gi|416409857|ref|ZP_11688552.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Crocosphaera watsonii WH 0003]
gi|67852699|gb|EAM48116.1| IspG protein [Crocosphaera watsonii WH 8501]
gi|357260544|gb|EHJ09944.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Crocosphaera watsonii WH 0003]
Length = 412
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 200/312 (64%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P ++ + + +IH RRKTR V VGN+ IG P+ VQ+M DT D+ G+V + R
Sbjct: 9 TPKIISQPDFDTTIH---RRKTRPVKVGNITIGGGFPVVVQSMINEDTLDIEGSVAAIRR 65
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H ++AL VA+ DK+
Sbjct: 66 LHEIGCEIVRVTVPSMGHAKALATIKEKLAQVYQPVPLVADVHHNGLNIALEVAKHVDKV 125
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + + EY+ +E++K I + PLV + G+A+RIG NHGSL++
Sbjct: 126 RINPGLYVFEKPRATRTEYSQEEFEKIGDKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 185
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF IC LDF+N + S+KAS VM+ AYRL+V M G
Sbjct: 186 RMLFTYGDTPEGMVESALEFIHICESLDFYNLIVSLKASRVPVMLAAYRLMVKRMDELGM 245
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 246 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 305
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 306 LRKTMVEYVACP 317
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 232 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 290 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + EQ + LI LIK GRW
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VHEEQGVEELINLIKADGRW 404
Query: 735 AEPPA 739
+P +
Sbjct: 405 VDPSS 409
>gi|218442210|ref|YP_002380539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 7424]
gi|226722782|sp|B7KJJ4.1|ISPG_CYAP7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218174938|gb|ACK73671.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7424]
Length = 406
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 198/300 (66%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRGVKVGDITIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L++ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAKALAEIKEKLIKTYKAVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+++ + I E PLV K+ +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 RADRTEYTPTEFEEIGEKIRETLKPLVLTLKEQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC L+F+N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICESLEFYNIVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 229 LAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDQGVEELINLIKADG 401
Query: 733 RWAEP 737
RW +P
Sbjct: 402 RWVDP 406
>gi|33240465|ref|NP_875407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|50400962|sp|Q7VBS7.1|ISPG_PROMA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33237993|gb|AAQ00060.1| deoxyxylulose pathway of isoprenoid biosynthesis-related protein
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 407
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/271 (51%), Positives = 183/271 (67%), Gaps = 1/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+VMVGN+ IGS++P+ VQ+M DT D+ + + R+ + G ++VR+TV
Sbjct: 24 RRKTRSVMVGNIGIGSDYPVAVQSMINEDTLDIEASTSAIRRLHEIGCEIVRLTVPSLSH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG F + E
Sbjct: 84 AKAVGEIKRRLEQNYLPVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFSNPDPSRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+++ E + I F P+V K +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 FSNSEISAIKEKIINNFEPIVNTLKAQNKALRIGVNHGSLAERMLFQYGDTPLGMVESAM 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS P VM+ AYRL+ M G++YPLHLGVTEAG+G+ GR
Sbjct: 204 EFVRICDSLDFHNIVISMKASRPPVMLAAYRLMADAMDKEGFNYPLHLGVTEAGDGDYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS +GIGTLL +GLGDTIRVSLTE PEKEI
Sbjct: 264 IKSTVGIGTLLTEGLGDTIRVSLTEAPEKEI 294
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + N+P+ H+ D I + +G LL +GLGD + L EA
Sbjct: 232 AYRLMADAMDKEGFNYPL--HLGVTEAGDGDYGRIKSTVGIGTLLTEGLGDTIRVSLTEA 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ ++++LQ +R T EY+SCPSCGRTLF+L+E+ A++R+ TSHL G+ I
Sbjct: 290 PEKEIP----VAYSILQTVGLRKTMVEYISCPSCGRTLFNLEEVVAKVRDATSHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +++ + ++ AL++LIK G+W
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKGKGIIALYRGREEIRK-VPEDEGVSALVELIKSDGKW 404
Query: 735 AEP 737
+P
Sbjct: 405 IDP 407
>gi|428307743|ref|YP_007144568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Crinalium
epipsammum PCC 9333]
gi|428249278|gb|AFZ15058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Crinalium
epipsammum PCC 9333]
Length = 411
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNITIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 85 AKALAEIKQKLIATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YAQAEFDEIGEKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFSYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLIISMKASRVPVMLAAYRLMAQRMDECGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 233 AYRLMAQRMDECGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 290
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 291 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDI 346
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + Q + LI LIK GRW
Sbjct: 347 AVMGCIVNGPGEMADADYGYVGKQPGFISLYRGREEIKK-VPESQGVEELINLIKGDGRW 405
Query: 735 AEP 737
EP
Sbjct: 406 VEP 408
>gi|33863049|ref|NP_894609.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9313]
gi|50400961|sp|Q7V7G9.1|ISPG_PROMM RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33634966|emb|CAE20952.1| GcpE protein [Prochlorococcus marinus str. MIT 9313]
Length = 406
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 205/325 (63%), Gaps = 13/325 (4%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
S+ +AE Q ++ ++Y IH RR TRTV VG V IGS+HP+RVQ+M D
Sbjct: 2 SATMAEYQSSTS--------RRYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINED 50
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-AP 172
T DV G + R+ + G ++VR+TV A A EI L + +PLVAD+H
Sbjct: 51 TLDVEGATAGIRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGM 110
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+AL VA DK+R+NPG F +A ++ E++ +E + I E F PLV + K+ +
Sbjct: 111 KIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDK 170
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIG NHGSL++R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ A
Sbjct: 171 ALRIGVNHGSLAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAA 230
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRL+ M G++YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEK
Sbjct: 231 YRLMADTMDQEGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEK 290
Query: 353 EIDPCRR-LANLGMRAAELQQGVAP 376
EI C L ++G+R ++ P
Sbjct: 291 EIPVCYSILQSIGLRKTMVEYISCP 315
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + N+P+ H+ D I + + LL +GLGD + L EA
Sbjct: 230 AYRLMADTMDQEGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R+ TSHL G+ I
Sbjct: 288 PEKEIP----VCYSILQSIGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ ++ + DALIQLIKD GRW
Sbjct: 344 AVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRK-VSESEGVDALIQLIKDDGRW 402
Query: 735 AEPP 738
+PP
Sbjct: 403 VDPP 406
>gi|332710435|ref|ZP_08430382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Moorea
producens 3L]
gi|332350766|gb|EGJ30359.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Moorea
producens 3L]
Length = 363
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RR+TR V V NV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRQTRPVRVANVTIGGGYPVVVQSMINEDTLDINGSVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHAKALAEIKEKLAATYQSVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EYT+ E+++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KANRSEYTEAEFEEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIRICESLDFRNLVISLKASRVPVMLAAYRLMVRRMNQLGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL +G+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 262 IKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVEYVACPSC 317
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIA 675
GRTLF+L+E+ ++RE T HL G+ IA
Sbjct: 318 GRTLFNLEEVLHKVREATKHLTGLDIA 344
>gi|443476946|ref|ZP_21066825.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
biceps PCC 7429]
gi|443018007|gb|ELS32335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
biceps PCC 7429]
Length = 422
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 205/331 (61%), Gaps = 12/331 (3%)
Query: 48 RNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQ 107
+N + + + A +P +GS E++ VRRKTR V VGN+ IG P+ VQ
Sbjct: 12 QNGTQNGTQKATAEPIVDGS----------ENLGVIVRRKTRPVQVGNITIGGGAPVVVQ 61
Query: 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD 167
+M DT D+ G+V + R+ + G ++VR+TV A A EI+ L + ++PLVAD
Sbjct: 62 SMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAHAAALSEIRQKLKRTYLDVPLVAD 121
Query: 168 IHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEK 226
+H +AL VA+ K+R+NPG + + + + EYT E+ + + + + PLV
Sbjct: 122 VHHNGMKIALEVAKHIHKVRINPGLYVFEKPKANRTEYTQSEFDEIAEKVRDTLKPLVLS 181
Query: 227 CKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286
K+ G+A+RIG NHGSL++R++ YGD+P+GMVESA EF RIC LDF N + SMKAS
Sbjct: 182 LKEQGKAMRIGVNHGSLAERMLFTYGDTPQGMVESAIEFIRICEDLDFKNIVISMKASRV 241
Query: 287 VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSL 346
VM+ AY+L+ M G DYPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSL
Sbjct: 242 PVMIAAYQLMAKRMDQLGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLSQGIGDTIRVSL 301
Query: 347 TEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
TE PEKEI C L +LG+R ++ P
Sbjct: 302 TEAPEKEIPVCYSILQSLGLRKTMVEYVACP 332
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL G+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 279 IKSTAGIATLLSQGIGDTIRVSLTEAPEKEIPV----CYSILQSLGLRKTMVEYVACPSC 334
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++RE TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY GK
Sbjct: 335 GRTLFNLEEVLHKVREATSHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGTISLYRGK 394
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+KR + + + LI LIK RW +P
Sbjct: 395 EEIKR-VPEAEGVEQLIALIKSDDRWVDP 422
>gi|434406189|ref|YP_007149074.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Cylindrospermum stagnale PCC 7417]
gi|428260444|gb|AFZ26394.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Cylindrospermum stagnale PCC 7417]
Length = 435
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 52 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 111
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL V++ +K+R+NPG + + + E
Sbjct: 112 AKALAEIKQKLIKTYRDVPIVADVHHNGMKIALEVSKHIEKVRINPGLYVFEKPNTNRTE 171
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT +E+ + + I E +PLV + G+++RIG NHGSL++R++ YGD+P+GMVESA
Sbjct: 172 YTQNEFDEIGEKIRETLAPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPQGMVESAI 231
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+FHN + SMKAS VMV AYRL+ + G DYPLHLGVTEAG+GE GR
Sbjct: 232 EFIRICESLNFHNLVISMKASRVPVMVAAYRLMAKRLDDLGMDYPLHLGVTEAGDGEYGR 291
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 292 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 345
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + L + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 258 VAAYRLMAKRLDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 315
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 316 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 371
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
+A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + + LI LIK G
Sbjct: 372 DVAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEALGVEELINLIKADG 430
Query: 733 RWAEP 737
RW EP
Sbjct: 431 RWVEP 435
>gi|428201337|ref|YP_007079926.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pleurocapsa sp. PCC 7327]
gi|427978769|gb|AFY76369.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pleurocapsa sp. PCC 7327]
Length = 407
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ L + +PLVAD+H +AL VA+ DK+RVNPG + + + + E
Sbjct: 84 AKAMAEIKDKLTKTYKPVPLVADVHHNGLKIALEVAKHVDKVRVNPGLYVFEKPKANRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV ++ G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 YTQAEFDEIGEKIRETLEPLVISLREQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAI 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICESLDFKNLVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL +G+GD + L EA
Sbjct: 232 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLTEA 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 290 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + + LI LIK GRW
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPQDNGVEELINLIKADGRW 404
Query: 735 AEP 737
+P
Sbjct: 405 VDP 407
>gi|282900471|ref|ZP_06308420.1| IspG protein [Cylindrospermopsis raciborskii CS-505]
gi|281194664|gb|EFA69612.1| IspG protein [Cylindrospermopsis raciborskii CS-505]
Length = 408
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRAVKVGDVIIGGGYPVVVQSMINEDTLDIDGSVSAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLQQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F+N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLNFYNIVISMKASRVPVMVAAYRLMSKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLMSKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
E+P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 ESPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKNPGFISLYRGREEIKK-VPEDQGVEELINLIKADG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWIDP 408
>gi|124023138|ref|YP_001017445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9303]
gi|123963424|gb|ABM78180.1| GcpE protein [Prochlorococcus marinus str. MIT 9303]
Length = 406
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 198/312 (63%), Gaps = 6/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
SP+ R +Y IH RR TRTV VG V IGS+HP+RVQ+M DT DV G + R
Sbjct: 8 SPISTSR-RYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRR 63
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++ R+TV A A EI L Q +PLVAD+H +AL VA+ DK+
Sbjct: 64 LHEIGCEIARLTVPSLGHAKAVGEICKRLKQTYQPVPLVADVHHNGMKIALEVAKHVDKV 123
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG F +A + E++ +E + I E F PLV K+ +A+RIG NHGSL++
Sbjct: 124 RINPGLFVFDKADPNRTEFSSEEIASIRERIAENFEPLVTLLKQQDKALRIGVNHGSLAE 183
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G+
Sbjct: 184 RMLFAYGDTPLGMVESAMEFVRICDALDFHNIVISMKASRAPVMLAAYRLMADTMDQEGF 243
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG
Sbjct: 244 NYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLG 303
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 304 LRKTMVEYISCP 315
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + N+P+ H+ D I + + LL +GLGD + L EA
Sbjct: 230 AYRLMADTMDQEGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEA 287
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R+ TSHL G+ I
Sbjct: 288 PEKEIP----VCYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDI 343
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ ++ + DALIQLIKD GRW
Sbjct: 344 AVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRK-VSESEGVDALIQLIKDDGRW 402
Query: 735 AEPP 738
+PP
Sbjct: 403 VDPP 406
>gi|427735481|ref|YP_007055025.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Rivularia
sp. PCC 7116]
gi|427370522|gb|AFY54478.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Rivularia
sp. PCC 7116]
Length = 409
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 ARALSEIKQKLKQTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPDANRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I + PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGDKIADTLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNIVISLKASRVPVMLAAYRLMAQRMDAEGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 99/149 (66%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD + L E+P ++ +++LQ +R T EYV+CPSC
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIP----VCYSILQALGLRKTMVEYVACPSC 320
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++RE TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 321 GRTLFNLEEVLHKVREATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGFISLYRGR 380
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + ++ + LI LIK RW EP
Sbjct: 381 EEIKK-VPEDKGVEELINLIKADERWVEP 408
>gi|172037227|ref|YP_001803728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. ATCC 51142]
gi|354553888|ref|ZP_08973194.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. ATCC 51472]
gi|226741009|sp|B1WQF1.1|ISPG_CYAA5 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171698681|gb|ACB51662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. ATCC 51142]
gi|353554605|gb|EHC23995.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. ATCC 51472]
Length = 404
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 198/312 (63%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG++ IG P+ VQ+M DT D+ G+V + R
Sbjct: 6 TPQTTSKPEFDTTIH---RRKTRPVKVGDITIGGGFPVVVQSMINEDTLDIEGSVSAIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEMGCEIVRVTVPSMAHAKALATIKEKLAQVYQPVPLVADVHHNGLKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + EYT E+++ + I + PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPSPTRSEYTQAEFEEIGEKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDF+N + S+KAS VM+ AYRL+V M G
Sbjct: 183 RMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELGM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 229 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 286
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 287 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 342
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK GRW
Sbjct: 343 AVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDQGVEELINLIKADGRW 401
Query: 735 AEP 737
+P
Sbjct: 402 IDP 404
>gi|434398651|ref|YP_007132655.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Stanieria
cyanosphaera PCC 7437]
gi|428269748|gb|AFZ35689.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Stanieria
cyanosphaera PCC 7437]
Length = 406
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVQVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAKALAEIKQKLAETYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ EYT E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 TGDRTEYTQAEFDEIGAKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF+N + S+KAS VM+ AYRL+V M G +YPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELGMEYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E + +P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 231 AYRLMVKRMDELGMEYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 289 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + ++ + LI LIK GRW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKQSGYIALYRGREEIKR-VPEDRGVEELINLIKTDGRW 403
Query: 735 AEP 737
+P
Sbjct: 404 VDP 406
>gi|313205142|ref|YP_004043799.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paludibacter
propionicigenes WB4]
gi|312444458|gb|ADQ80814.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paludibacter
propionicigenes WB4]
Length = 595
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 191/306 (62%), Gaps = 1/306 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + T+ +G + +G P+RVQ+M DT DV +V + +RI + G ++VR T QG RE
Sbjct: 12 RRPSDTIQIGKLLLGGNQPVRVQSMANTDTNDVENSVAQCLRIVEAGGEMVRFTTQGVRE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A++ +I +L K +PLVADIHF + A A +K+R+NPGN+ + +Y
Sbjct: 72 AESIGKIHEALRDKGCEVPLVADIHFNANAADVAATNVEKVRINPGNYVGSIKIGDTSDY 131
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T +E++ E Q I F P + CK A+RIG NHGSLS+R+M+ YGD+ GMVES E
Sbjct: 132 TAEEFELEYQKIRARFIPFLNICKANNTAIRIGVNHGSLSERMMNKYGDTSLGMVESCME 191
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F +IC + +F N + SMK SN V+MV RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 192 FLKICNEENFSNVVISMKTSNTVMMVHTVRLLVDRMEKEGLHFPLHLGVTEAGDGEDGRI 251
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P RL + QQ + E
Sbjct: 252 KSAVGIGGLLADGIGDTIRVSLSEEPEAEI-PVGRLLVSYVAGRGKQQPIVATEHVLHSR 310
Query: 385 FDFQRR 390
F++ RR
Sbjct: 311 FEYSRR 316
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
Query: 590 LVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
L I + ++G L +DG GDG+LLE G + + +F +LQ R+R TKTE++SCP C
Sbjct: 448 LQIKSAADLGVLFIDGFGDGILLENTGAISVEAVNSVAFGILQASRVRVTKTEFISCPGC 507
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRT+F LQ + A ++ +TSHL G+ I IMGC+VNGPGEMADAD+GYVG GK+ LY K
Sbjct: 508 GRTMFKLQHVIARVKAQTSHLKGLKIGIMGCVVNGPGEMADADYGYVGAGRGKVSLYKKK 567
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRW 734
++R I + A + L++LIK +G W
Sbjct: 568 ECLERNIPEDDAVNKLVELIKVNGDW 593
>gi|427729408|ref|YP_007075645.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc sp.
PCC 7524]
gi|427365327|gb|AFY48048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc sp.
PCC 7524]
Length = 423
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 40 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 99
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 100 AVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNANRTE 159
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 160 YTPAEFNEIGEKIRGTLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 219
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 220 EFIRICESLDFRNLVISMKASRVPVMVAAYRLMAKRMDELGMDYPLHLGVTEAGDGEYGR 279
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 280 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 333
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 246 VAAYRLMAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 303
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 304 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 359
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q + LI LIK G
Sbjct: 360 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDQGVEELINLIKADG 418
Query: 733 RWAEP 737
RW +P
Sbjct: 419 RWVDP 423
>gi|443315911|ref|ZP_21045379.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 6406]
gi|442784484|gb|ELR94356.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 6406]
Length = 407
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+AG+V + R+ + G ++VR+TV
Sbjct: 23 RRQTRPVPVGNITIGGGNPVVVQSMINEDTLDIAGSVAAIQRLHELGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A I+ +L +PLVAD+H +AL VA+ DK+R+NPG + + Q + E
Sbjct: 83 AKALATIRQTLEATYRPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPQAGRTE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + Q I + PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTPTEFDEIGQKIRDTLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIRICESLDFRNLVISLKASRVPVMVAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVRRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q LI LI+ G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDQGVAELINLIQADG 401
Query: 733 RWAEP 737
RW +P
Sbjct: 402 RWVDP 406
>gi|186685139|ref|YP_001868335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc
punctiforme PCC 73102]
gi|238055491|sp|B2J1G1.1|ISPG_NOSP7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|186467591|gb|ACC83392.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc
punctiforme PCC 73102]
Length = 408
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL V++ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYQDVPIVADVHHNGLKIALEVSKHIEKVRINPGLYVFEKPNVNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQSEFDEIGDKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISMKASRVPVMLAAYRLIAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL DG+GD + L EA
Sbjct: 233 AYRLIAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLTEA 290
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 291 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 346
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + ++ + LI LIK RW
Sbjct: 347 AVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDKGVEELINLIKADERW 405
Query: 735 AEP 737
EP
Sbjct: 406 VEP 408
>gi|428205658|ref|YP_007090011.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Chroococcidiopsis thermalis PCC 7203]
gi|428007579|gb|AFY86142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Chroococcidiopsis thermalis PCC 7203]
Length = 408
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VGNV IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRQTRPIQVGNVTIGGSHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +P+VAD+H +AL VA+ DK+R+NPG + + + + E
Sbjct: 85 AQALAEIKQKLYASYQPVPIVADVHHNGMKIALEVAKHIDKVRINPGLYVFEKPKSNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+ E+++ I + PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YSQTEFEEIGDKIRQTLEPLVVCLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISLKASRVPVMIAANRLMVKRMNELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 265 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 318
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + ++E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 231 IAANRLMVKRMNELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + ++ + LI LIK
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEIKR-VPEDRGVEELINLIKADD 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|427717090|ref|YP_007065084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 7507]
gi|427349526|gb|AFY32250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 7507]
Length = 408
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGNYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIHTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRSE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKAEFDEIGEKICETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFVRICESLNFRNIVISMKASRVPVMVAAYRLIAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 VAAYRLIAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q + LI LIK G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDQGVEELIDLIKADG 403
Query: 733 RWAEP 737
RW EP
Sbjct: 404 RWVEP 408
>gi|254421770|ref|ZP_05035488.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7335]
gi|196189259|gb|EDX84223.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7335]
Length = 416
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 203/325 (62%), Gaps = 8/325 (2%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
SS A+ +P + +P V + +IH RRKTR V VG++ IG HP+ VQ+M D
Sbjct: 5 SSPAAKPKPTTTSAPAEV---AFDTTIH---RRKTRPVKVGDITIGGGHPVVVQSMINED 58
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-AP 172
T D+ G+V + R+ + G ++VR+TV A A EIK+ L + +PLVAD+H
Sbjct: 59 TLDIEGSVAAIRRLHEVGCEIVRVTVPSMAHARALSEIKDRLAKTYQPVPLVADVHHNGM 118
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+AL VA+ DK+R+NPG + +A+ ++ EYT E+ + I E PLV + +
Sbjct: 119 KIALEVAKHVDKVRINPGLYVFEKAESDRTEYTQAEFDAIGEKIRETLEPLVISLRDQNK 178
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIG NHGSL++R++ YGD+P GMVESA EF RIC L+F N + S+KAS VM+ A
Sbjct: 179 AMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLNFRNIVLSLKASRVPVMLAA 238
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRL+V M G YPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSLTE PEK
Sbjct: 239 YRLMVQRMDELGMSYPLHLGVTEAGDGEYGRIKSTAGIATLLAMGIGDTIRVSLTEAPEK 298
Query: 353 EIDPCRR-LANLGMRAAELQQGVAP 376
EI C L LG+R ++ P
Sbjct: 299 EIPVCYSILQALGLRKTMVEYVACP 323
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL G+GD + L EA
Sbjct: 238 AYRLMVQRMDELGMSYPL--HLGVTEAGDGEYGRIKSTAGIATLLAMGIGDTIRVSLTEA 295
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++RE TSHL G+ I
Sbjct: 296 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHKVREATSHLTGLDI 351
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG I LY G+ +KR + E + LI LIK GRW
Sbjct: 352 AVMGCIVNGPGEMADADYGYVGKQANTIALYRGREEIKR-VPEENGVEELINLIKSDGRW 410
Query: 735 AEP 737
EP
Sbjct: 411 VEP 413
>gi|72381949|ref|YP_291304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL2A]
gi|72001799|gb|AAZ57601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL2A]
Length = 399
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 188/282 (66%), Gaps = 4/282 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+Y I +RR TR VMVG++ IG ++P+RVQ+M DT D+ G+ + R+ + G +
Sbjct: 8 QRYSTRI---IRRDTRPVMVGDIGIGGDNPVRVQSMINEDTMDIEGSTAAIRRLHEVGCE 64
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+TV A A EIK L +PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 65 IVRLTVPTLASAKAVGEIKKLLASTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLF 124
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T DE + I + F P+V K+ +A+RIG NHGSLS+R++ YG
Sbjct: 125 VFEKPDPNRTEFTKDEIDVIKEKIIQKFKPIVNTLKEQNKALRIGVNHGSLSERMLFAYG 184
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EF RIC LDFHN + SMKAS VM+ AYR++ M G++YPLHLG
Sbjct: 185 DTPFGMVESAMEFIRICHSLDFHNIVISMKASRAPVMLAAYRMMADTMDKEGFNYPLHLG 244
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 245 VTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 286
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + N+P+ H+ D I + +G LL +G+GD + L EA
Sbjct: 224 AYRMMADTMDKEGFNYPL--HLGVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEA 281
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ ++++LQ +R T EY+SCPSCGRTLF+L+E+ A +R+ T HL G+ I
Sbjct: 282 PEKEIP----VAYSILQAVGLRKTMVEYISCPSCGRTLFNLEEVVARVRDATQHLTGLDI 337
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY + +KR + ++ AL+ LIK+ G+W
Sbjct: 338 AVMGCIVNGPGEMADADYGYVGKGVGTIALYRNRDEIKR-VPEDEGVQALVDLIKEDGKW 396
Query: 735 AEP 737
+P
Sbjct: 397 VDP 399
>gi|317970145|ref|ZP_07971535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CB0205]
Length = 407
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/309 (48%), Positives = 195/309 (63%), Gaps = 4/309 (1%)
Query: 72 PRQKYCESIHKTV--RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
P S + TV RR+TR+V VG++ IGSEHP+ VQ+M DT D+ G + R+ +
Sbjct: 9 PEAGQLSSRYDTVIRRRQTRSVRVGDLWIGSEHPVVVQSMINEDTLDIEGATAGIRRLHE 68
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVN 188
G ++VR+TV A A EI+ L +PLVAD+H +AL VA DK+R+N
Sbjct: 69 AGCEIVRVTVPSLAHAKAMGEIRKRLEDTYQPVPLVADVHHNGMKIALEVANHVDKVRIN 128
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PG F + + E+T +E + I E F PLV K +A+RIG NHGSL++R++
Sbjct: 129 PGLFVFDKPDPNRTEFTPEEIAQIGDRITETFEPLVSLLKAQDKALRIGVNHGSLAERML 188
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
YGD+P GMVESA EF RIC +LDFHN + SMKAS VM+ AYR++ M G++YP
Sbjct: 189 FTYGDTPLGMVESALEFIRICDRLDFHNIVVSMKASRAPVMLAAYRMMADRMDAEGFNYP 248
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
LHLGVTEAG+G+ GR+KS GI TLL DGLGDTIRVSLTE PEKEI C L +LG+R
Sbjct: 249 LHLGVTEAGDGDYGRIKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRK 308
Query: 368 AELQQGVAP 376
++ P
Sbjct: 309 TMVEYVSCP 317
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + N+P+ H+ D I + + LL DGLGD + L
Sbjct: 230 LAAYRMMADRMDAEGFNYPL--HLGVTEAGDGDYGRIKSTAGIATLLADGLGDTIRVSLT 287
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYVSCPSCGRTLF+L+++ ++R TSHL G+
Sbjct: 288 EAPEKEIP----VCYSILQSLGLRKTMVEYVSCPSCGRTLFNLEDVLNKVRNATSHLTGL 343
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + +ALI LIKD G
Sbjct: 344 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRR-VPEAEGVEALIALIKDDG 402
Query: 733 RWAEP 737
RW +P
Sbjct: 403 RWVDP 407
>gi|212692828|ref|ZP_03300956.1| hypothetical protein BACDOR_02327 [Bacteroides dorei DSM 17855]
gi|212664617|gb|EEB25189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei DSM 17855]
Length = 583
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 173/254 (68%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MT T D VE+ RI D G + VR+T QG REA+ I L + Y+ PLVAD+
Sbjct: 1 MTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVREAENLKNINIGLRSQGYDTPLVADV 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P VA A+ +K+R+NPGN+ D F +LEYTD+EY +E++ I F P + CK
Sbjct: 61 HFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEYTDEEYAQEIEKIRARFVPFLNICK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ A+RIG NHGSLSDRIMS+YGD+P GMVES EF RIC F++ + S+KASN VV
Sbjct: 121 ENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCMEFLRICVAEHFNDVVISIKASNTVV 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV+ RLLV EM +PLHLGVTEAG+GEDGR+KS++GIG LL DGLGDTIRVSL+E
Sbjct: 181 MVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRIKSSLGIGALLADGLGDTIRVSLSE 240
Query: 349 PPEKEIDPCRRLAN 362
PE EI R+L +
Sbjct: 241 APENEIPVARKLVD 254
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R + L L PV+ Q+ +DL I A ++GAL+ DGL DG+ L
Sbjct: 401 RLGEYRAMTHELMNEGLENPVVF-FQYYQETKTEDLQIKAAADMGALIFDGLCDGIFLYN 459
Query: 615 PGQDFDFLRDTS-FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
G DT+ F++LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+
Sbjct: 460 QGSLSHIAVDTTAFSILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKAATSHLKGLK 519
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G
Sbjct: 520 IGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGD 579
Query: 734 WAE 736
+ E
Sbjct: 580 YTE 582
>gi|298489830|ref|YP_003720007.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ['Nostoc
azollae' 0708]
gi|298231748|gb|ADI62884.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ['Nostoc
azollae' 0708]
Length = 407
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRAVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +A+ VA+ +K+R+NPG + + + E
Sbjct: 84 AKALAEIKPKLIKTYRDVPIVADVHHNGMKIAMEVAKHIEKVRINPGLYVFEKPNTSRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 YTKVEFDEIGEKIRETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC DF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICESFDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DGLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + + +++P+ H+ + I + + LL DGLGD + L
Sbjct: 230 VAAYRLMAKRMDDLGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGLGDTIRVSLT 287
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ +RE T HL G+
Sbjct: 288 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHTVREATKHLTGL 343
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +K+ + + LI LIK G
Sbjct: 344 DIAVMGCIVNGPGEMADADYGYVGKTPSYISLYRGREEIKK-VPENLGVEELINLIKADG 402
Query: 733 RWAEP 737
RW EP
Sbjct: 403 RWVEP 407
>gi|428219222|ref|YP_007103687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
sp. PCC 7367]
gi|427991004|gb|AFY71259.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
sp. PCC 7367]
Length = 412
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 199/318 (62%), Gaps = 10/318 (3%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q A +PL E++ RRKTR V VGNV IG +P+ VQ+M DT D+ G
Sbjct: 13 QSAPAAAPL--------ENLGTIQRRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGA 64
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVA 179
V + R+ + G +++R+TV A A EI+ L + N+PLVAD+H +AL VA
Sbjct: 65 VAGIRRLHEIGCEIMRVTVPSMAHARALAEIRTKLQRTYVNVPLVADVHHNGMKIALEVA 124
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
+ DK+R+NPG + + + ++ EYT E+ + I E PLV K+ G+A+RIG N
Sbjct: 125 KHVDKVRINPGLYVFEKPKDDRTEYTQAEFDEIGDKIRETLKPLVLSLKEQGKAMRIGVN 184
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSL++R++ YGD+P+GMVESA EF RIC +LDF N + S+KAS VM+ AY+L+
Sbjct: 185 HGSLAERMLFTYGDTPQGMVESALEFIRICEELDFRNLVISLKASRVPVMIAAYQLMARR 244
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M G DYPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSLTE PEKEI C
Sbjct: 245 MDQLGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLAQGIGDTIRVSLTEAPEKEIPVCYG 304
Query: 360 -LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 305 ILQALGLRKTMVEYVACP 322
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 95/149 (63%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL G+GD + L EAP ++ + +LQ +R T EYV+CPSC
Sbjct: 269 IKSTAGIATLLAQGIGDTIRVSLTEAPEKEIPV----CYGILQALGLRKTMVEYVACPSC 324
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++R T+HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY GK
Sbjct: 325 GRTLFNLEEVLHKVRSATAHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGK 384
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+KR + E LI LIKD RW EP
Sbjct: 385 EEIKR-VPEEDGVAELIALIKDDDRWVEP 412
>gi|425471132|ref|ZP_18849992.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9701]
gi|389883027|emb|CCI36555.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9701]
Length = 406
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|428213317|ref|YP_007086461.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoria acuminata PCC 6304]
gi|428001698|gb|AFY82541.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoria acuminata PCC 6304]
Length = 408
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 192/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 22 TIH---RRKTRPVPVGNITIGGGNPVVVQSMINEDTLDIEGSVAGIRRLHEIGCEIVRVT 78
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 79 VPSMAHAKALAEIKQRLARTYLLVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 138
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ EYT E+ + + I PLV + G+++RIG NHGSL++R++ YGD+P G
Sbjct: 139 NPNRTEYTPTEFAEIGEKIRATLEPLVISLRDQGKSMRIGVNHGSLAERMLFSYGDTPEG 198
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 199 MVESALEFIRICESLDFRNLVISMKASRVPVMLAAYRLMVQRMDHLGMDYPLHLGVTEAG 258
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 259 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LL +G+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 265 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVEYVACPSC 320
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 321 GRTLFNLEEVLHQVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR 380
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + Q D LI+LI+ GRW +P
Sbjct: 381 DEIKK-VPESQGVDELIKLIQADGRWVDP 408
>gi|158333377|ref|YP_001514549.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
marina MBIC11017]
gi|229485800|sp|B0C6E1.1|ISPG_ACAM1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|158303618|gb|ABW25235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
marina MBIC11017]
Length = 408
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIEGSVAAIRRLHELGCEIVRVTVPSMAH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + +A+ ++ E
Sbjct: 84 AKALATIKEKLTATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKAKDDRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++ E++ I E PLV + +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 FSQSEFENIGDKIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC+ LDF+N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICQSLDFNNLVISMKASRVPVMLAAYRLMARRMDELGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDT+RVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLADGIGDTLRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD L L E+P ++ +++LQ +R T EYV+CPSC
Sbjct: 264 IKSTAGIATLLADGIGDTLRVSLTESPEKEIPV----CYSILQALGLRKTMVEYVACPSC 319
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++R T+HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 320 GRTLFNLEEVLHQVRSATNHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR 379
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
VK+ + + + LI LIK GRW +P
Sbjct: 380 EEVKK-VPETEGVEELINLIKSDGRWVDP 407
>gi|425461830|ref|ZP_18841304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9808]
gi|389825252|emb|CCI25137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9808]
Length = 406
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|334118766|ref|ZP_08492854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcoleus
vaginatus FGP-2]
gi|333458996|gb|EGK87611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcoleus
vaginatus FGP-2]
Length = 406
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRKTRPVKVGSVTIGGGNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKALAEIKQKLHATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRSE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDSEFAEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIKICESLDFRNIVLSLKASRAPVMVAAYRLMVHRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGLAPLLTDGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 11/216 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++I + +D I+ L + + V A R + + E +++P+ H+
Sbjct: 199 ESALEFIKICESLDFRNIVLSLKASRAPV-MVAAYRLMVHRMDELGMDYPL--HLGVTEA 255
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
+ I + + LL DG+GD + L EAP ++ +++LQ +R T E
Sbjct: 256 GDGEYGRIKSTAGLAPLLTDGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVE 311
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
YV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG
Sbjct: 312 YVACPSCGRTLFNLEEVLHQVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGY 371
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I LY G+ +K+ + ++ LI LIK RW +P
Sbjct: 372 ISLYRGREEIKK-VPEDRGVAELIDLIKSDDRWVDP 406
>gi|425451309|ref|ZP_18831131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 7941]
gi|440753455|ref|ZP_20932658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa TAIHU98]
gi|389767458|emb|CCI07148.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 7941]
gi|440177948|gb|ELP57221.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa TAIHU98]
Length = 406
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR E T+ LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKRVPESEGVTE-LINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|428315815|ref|YP_007113697.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
nigro-viridis PCC 7112]
gi|428239495|gb|AFZ05281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
nigro-viridis PCC 7112]
Length = 406
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRKTRPVKVGSVTIGGGNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKALAEIKQKLHATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRTE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDAEFAEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIKICESLDFRNIVLSLKASRAPVMVAAYRLMVHRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGLAPLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 11/216 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++I + +D I+ L + + V A R + + E +++P+ H+
Sbjct: 199 ESALEFIKICESLDFRNIVLSLKASRAPV-MVAAYRLMVHRMDELGMDYPL--HLGVTEA 255
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
+ I + + LL DG+GD + L EAP ++ +++LQ +R T E
Sbjct: 256 GDGEYGRIKSTAGLAPLLADGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVE 311
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGK 701
YV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG
Sbjct: 312 YVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGY 371
Query: 702 IDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
I LY G+ +K+ + ++ LI LIK RW +P
Sbjct: 372 ISLYRGREEIKK-VPEDRGVAELIDLIKSDDRWVDP 406
>gi|427417323|ref|ZP_18907506.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 7375]
gi|425760036|gb|EKV00889.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 7375]
Length = 408
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K +RRKTR V VGNV IG P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 KIIRRKTRPVPVGNVIIGGGAPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPS 79
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + + +
Sbjct: 80 MAHAKALATIKEKLAATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPSDD 139
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + I E PLV + +++RIG NHGSL++R++ YGD+P GMVE
Sbjct: 140 RTEYTQAEFDAIGEKIRETLEPLVIALRDQNKSMRIGVNHGSLAERMLFTYGDTPEGMVE 199
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC L+FHN + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE
Sbjct: 200 SALEFIRICESLNFHNLVISLKASRVPVMLAAYRLMAQRMDQLGMDYPLHLGVTEAGDGE 259
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 260 YGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LL +G+GD + L EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 263 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPV----CYSILQALGLRKTMVEYVACPSC 318
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 319 GRTLFNLEEVLHKVRAATDHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGR 378
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+KR + E + LI LIK GRW EP
Sbjct: 379 EEIKR-VPEESGVEELINLIKSDGRWIEP 406
>gi|359460349|ref|ZP_09248912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
sp. CCMEE 5410]
Length = 408
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 IRRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIDGSVAAIRRLHELGCEIVRVTVPSMA 82
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + +A+ ++
Sbjct: 83 HAKALATIKEKLTTTYQKVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKAKDDRT 142
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
E++ E+ I E PLV + +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 EFSQSEFDDIGDKIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEGMVESA 202
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC+ LDF+N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE G
Sbjct: 203 LEFIRICQSLDFNNLVISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAGDGEYG 262
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL DG+GDT+RVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 RIKSTAGIATLLADGIGDTLRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL DG+GD L L E+
Sbjct: 232 AYRLMAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTLRVSLTES 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+ I
Sbjct: 290 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVRSATNHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ VK+ + + + LI LIK GRW
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEVKK-VPETEGVEELINLIKSDGRW 404
Query: 735 AEP 737
+P
Sbjct: 405 VDP 407
>gi|119510040|ref|ZP_01629181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nodularia
spumigena CCY9414]
gi|119465364|gb|EAW46260.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nodularia
spumigena CCY9414]
Length = 408
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 189/297 (63%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 22 KIKRRKTRPVKVGNVTIGGNYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPS 81
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + +
Sbjct: 82 MAHAKVMAEIKQRLIKTYQDVPIVADVHHNGMRIALEVAKHIEKVRINPGLYVFEKPNSN 141
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVE
Sbjct: 142 RSEYTKTEFDEIGDKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVE 201
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC L+F N + SMKAS VM+ AYR++ + G DYPLHLGVTEAG+GE
Sbjct: 202 SALEFIRICESLNFRNLVISMKASRVPVMIAAYRMMAKRLDELGMDYPLHLGVTEAGDGE 261
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 262 YGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + L E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 231 IAAYRMMAKRLDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 289 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
+A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + Q + LI LIK G
Sbjct: 345 DVAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEAQGVEELINLIKADG 403
Query: 733 RWAEP 737
RW EP
Sbjct: 404 RWVEP 408
>gi|126656414|ref|ZP_01727675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. CCY0110]
gi|126622100|gb|EAZ92807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. CCY0110]
Length = 404
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 197/312 (63%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG++ IG P+ VQ+M DT D+ G+V + R
Sbjct: 6 TPQTNSKPEFDTTIH---RRKTRPVKVGDITIGGGFPVVVQSMINEDTLDIEGSVSAIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEMGCEIVRVTVPSMAHAKALATIKEKLAQVYQPVPLVADVHHNGLKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + EYT E+++ + I + PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPSPTRSEYTQAEFEEIGEKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDF+N + S+KAS VM+ AYRL+V M
Sbjct: 183 RMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELAM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + +G LL +G+GD + L EA
Sbjct: 229 AYRLMVKRMDELAMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEA 286
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 287 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 342
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + +Q LI LIK GRW
Sbjct: 343 AVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEIKK-VPEDQGVQELINLIKVDGRW 401
Query: 735 AEP 737
+P
Sbjct: 402 IDP 404
>gi|307151431|ref|YP_003886815.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7822]
gi|306981659|gb|ADN13540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7822]
Length = 406
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 196/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAVALAKIKEQLAKTYKPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I E PLV K+ +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KDDRSEYTQAEFNEIGEKIRETLKPLVLTLKEQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC L+F+N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICESLEFYNIVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 229 LAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ +R+ T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLDRVRKATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + ++ + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDKGVEELINLIKADG 401
Query: 733 RWAEP 737
RW +P
Sbjct: 402 RWVDP 406
>gi|425436437|ref|ZP_18816873.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9432]
gi|389678876|emb|CCH92329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9432]
Length = 406
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSLS+R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQDKAMRIGVNHGSLSERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|218247583|ref|YP_002372954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 8801]
gi|257061083|ref|YP_003138971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 8802]
gi|226722783|sp|B7K5R5.1|ISPG_CYAP8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218168061|gb|ACK66798.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 8801]
gi|256591249|gb|ACV02136.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 8802]
Length = 406
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 197/319 (61%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
+Q PL ++ +IH RR+TR V VG++ IG +P+ VQ+M DT D+ G
Sbjct: 1 MQTLETPKPLTNTSPEFDTTIH---RRQTRPVKVGDITIGGGYPVVVQSMINEDTLDIEG 57
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
+V + R+ + G ++VR+TV A A EI L + +PLVAD+H +AL V
Sbjct: 58 SVAGIRRLHEIGCEIVRVTVPSMAHAKALAEINQKLAEVYRRVPLVADVHHNGLKIALEV 117
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG + + + EYT E+ + + I E PLV + G+A+RIG
Sbjct: 118 AKHVDKVRINPGLYVFEKPSTTRSEYTQAEFDEIGEKISETLKPLVVSLRDQGKAMRIGV 177
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF RIC LDF N + S+KAS VM+ AYRL+V
Sbjct: 178 NHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNLVISLKASRVPVMLAAYRLMVK 237
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
M G DYPLHLGVTEAG+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C
Sbjct: 238 RMDELGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCY 297
Query: 359 R-LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 298 SILQALGLRKTMVEYVACP 316
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL +G+GD + L EA
Sbjct: 231 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 289 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + +Q LI+LIK GRW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPEDQGVQELIELIKADGRW 403
Query: 735 AEP 737
EP
Sbjct: 404 VEP 406
>gi|443648674|ref|ZP_21130062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa DIANCHI905]
gi|159029945|emb|CAO90324.1| ispG [Microcystis aeruginosa PCC 7806]
gi|443335128|gb|ELS49608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa DIANCHI905]
Length = 406
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVIIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLTTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV YRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVISLKASRVPVMVATYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VATYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|422303390|ref|ZP_16390741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9806]
gi|389791661|emb|CCI12560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9806]
Length = 406
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|443325072|ref|ZP_21053785.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Xenococcus
sp. PCC 7305]
gi|442795328|gb|ELS04702.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Xenococcus
sp. PCC 7305]
Length = 406
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 195/312 (62%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R
Sbjct: 6 NPNVTVTSEFDTTIH---RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A EIK L Q N+PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEIGCEIVRVTVPSMAHAKALAEIKEKLQQTYQNVPLVADVHHNGMKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + ++ EY E++ I PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPKSDRTEYNQAEFEDIGSKIRATLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF IC LDF N + S+KAS VM+ AY+L+V M
Sbjct: 183 RMLFTYGDTPEGMVESALEFIHICESLDFRNLVISLKASRVPVMIAAYKLMVQRMNELSM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAAGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A + + + ++E ++++P+ H+ + I + +G LL G+GD + L
Sbjct: 227 IAAYKLMVQRMNELSMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAAGIGDTIRVSLT 284
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE TSHL G+
Sbjct: 285 EAPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATSHLTGL 340
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + E + LI LIK
Sbjct: 341 DIAVMGCIVNGPGEMADADYGYVGKQPGYIALYRGREEIKR-VPEENGVEELINLIKADD 399
Query: 733 RWAEP 737
RW EP
Sbjct: 400 RWVEP 404
>gi|318041680|ref|ZP_07973636.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CB0101]
Length = 408
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG++ +GS+HP+ VQ+M DT D+ G + R+ + G ++VR+TV
Sbjct: 25 RRKTRSVRVGDLWMGSDHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG F + + E
Sbjct: 85 AKAMGEIRQRLESAYKPVPLVADVHHNGMKIALEVAQHVDKVRINPGLFVFDKPDPNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++D E I E F PLV+ K+ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 FSDAEIAAIGDRITETFEPLVKLLKEQDKALRIGVNHGSLAERMLFRYGDTPLGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 205 EFIRICDRLDFHNIVISMKASRAPVMLAAYRMMADRMDAEGFHYPLHLGVTEAGDGDYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLSEGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVSCP 318
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + ++P+ H+ D I + + LL +GLGD + L
Sbjct: 231 LAAYRMMADRMDAEGFHYPL--HLGVTEAGDGDYGRIKSTAGIATLLSEGLGDTIRVSLT 288
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYVSCPSCGRTLF+L+E+ ++R T+HL G+
Sbjct: 289 EAPEKEIP----VCYSILQALGLRKTMVEYVSCPSCGRTLFNLEEVLHKVRSATAHLTGL 344
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + DALI LIK+ G
Sbjct: 345 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGREEIRR-VPEAEGVDALIALIKEDG 403
Query: 733 RWAEP 737
RW +P
Sbjct: 404 RWVDP 408
>gi|166365559|ref|YP_001657832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa NIES-843]
gi|425467392|ref|ZP_18846675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9809]
gi|189045790|sp|B0JJJ8.1|ISPG_MICAN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166087932|dbj|BAG02640.1| GcpE protein homolog [Microcystis aeruginosa NIES-843]
gi|389829852|emb|CCI28492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9809]
Length = 406
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVQVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|425446591|ref|ZP_18826594.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9443]
gi|389733115|emb|CCI03078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9443]
Length = 406
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVQVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|16330309|ref|NP_441037.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|383322050|ref|YP_005382903.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383325219|ref|YP_005386072.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491103|ref|YP_005408779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384436370|ref|YP_005651094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|451814467|ref|YP_007450919.1| GcpE protein [Synechocystis sp. PCC 6803]
gi|8928139|sp|P73672.1|ISPG_SYNY3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|1652798|dbj|BAA17717.1| GcpE protein [Synechocystis sp. PCC 6803]
gi|339273402|dbj|BAK49889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|359271369|dbj|BAL28888.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359274539|dbj|BAL32057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359277709|dbj|BAL35226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|451780436|gb|AGF51405.1| GcpE protein [Synechocystis sp. PCC 6803]
Length = 403
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 191/300 (63%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG V +G HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 17 TIH---RRKTRPVPVGAVTVGGGHPVVVQSMINEDTLDVDGSVAGIRRLHEIGCEIVRVT 73
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 74 VPSMAHAKALADIKQKLQATYQAVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 133
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ Y+D E+ + + I E PLV + G+++RIG NHGSLS+R++ YGD+P G
Sbjct: 134 DAQREGYSDQEFAEIGEKIRETLEPLVISLRDQGKSMRIGVNHGSLSERMLFTYGDTPEG 193
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF +IC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 194 MVQSALEFIKICESLDFRNLVVSMKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 253
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 254 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 313
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 109/183 (59%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL DG+GD + L EA
Sbjct: 228 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLTEA 285
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T HL G+ I
Sbjct: 286 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATKHLTGLDI 341
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + LI LIK GRW
Sbjct: 342 AVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPETDGVQELINLIKADGRW 400
Query: 735 AEP 737
+P
Sbjct: 401 VDP 403
>gi|390437784|ref|ZP_10226303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
sp. T1-4]
gi|389838824|emb|CCI30427.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
sp. T1-4]
Length = 406
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATKHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR E T+ LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKRVPESEGVTE-LINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|425457671|ref|ZP_18837369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9807]
gi|389800907|emb|CCI19854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9807]
Length = 406
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHAAALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFSYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|443312891|ref|ZP_21042505.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechocystis sp. PCC 7509]
gi|442777041|gb|ELR87320.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechocystis sp. PCC 7509]
Length = 397
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 192/300 (64%), Gaps = 7/300 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR+V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 13 TIH---RRKTRSVKVGNIIIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 69
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 70 VPSMAHAKALAEIKQKLALTYQSVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 129
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ +YT ++ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 130 KTS--DYTQADFDEIGEKIRETLAPLVVSLRDRGKAMRIGVNHGSLAERMLFTYGDTPEG 187
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VMV AYRL+ M G DYPLHLGVTEAG
Sbjct: 188 MVESALEFIRICESLDFGNIVISLKASRVPVMVAAYRLMAQRMDALGMDYPLHLGVTEAG 247
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI LL DG+GDTIRVS+TE PEKEI C L LG+R ++ P
Sbjct: 248 DGEYGRIKSTAGIAPLLADGIGDTIRVSITEAPEKEISVCYSILQALGLRKTMVEYVACP 307
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD + + EAP ++ +++LQ +R T EYV+CPSC
Sbjct: 254 IKSTAGIAPLLADGIGDTIRVSITEAPEKEISV----CYSILQALGLRKTMVEYVACPSC 309
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+E+ E+RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 310 GRTLFNLEEVLHEVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR 369
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + + LI LIK RW +P
Sbjct: 370 EEIKK-VPEAEGVKELINLIKADDRWIDP 397
>gi|428223580|ref|YP_007107677.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geitlerinema
sp. PCC 7407]
gi|427983481|gb|AFY64625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geitlerinema
sp. PCC 7407]
Length = 407
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 188/300 (62%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 21 TIH---RRKTRPVPVGSVTIGGGHPVAVQSMINEDTLDVDGSVAAIRRLHEAGCEIVRVT 77
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A IK L +PLVAD+H +AL VA+ DK+R+NPG +
Sbjct: 78 VPSMAHAKALAVIKQKLADTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFENR 137
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ YT E+++ Q I E PLV + G+++RIG NHGSL++R++ YGD+P G
Sbjct: 138 KSGSGAYTQAEFEEIGQKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEG 197
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LD+ N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 198 MVESALEFIRICESLDYRNLVISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAG 257
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 258 DGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + + LL +G+GD + L
Sbjct: 230 LAAYRLMAKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLT 287
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+
Sbjct: 288 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATNHLTGL 343
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + +Q LI LIK G
Sbjct: 344 DIAVMGCIVNGPGEMADADYGYVGKTPGYIALYRGRDEIKR-VPEDQGVQELINLIKADG 402
Query: 733 RWAEP 737
RW +P
Sbjct: 403 RWVDP 407
>gi|434387661|ref|YP_007098272.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chamaesiphon minutus PCC 6605]
gi|428018651|gb|AFY94745.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chamaesiphon minutus PCC 6605]
Length = 406
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V +G+V IG +P+ VQ+M DT D+ G V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVAIGSVIIGGNNPVVVQSMINEDTLDIDGAVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHARALAEIKQKLIDTYQIVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I ++ PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KPDRTEYTPTEFAEIGEQIRDMLEPLVVSLRNQNKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA E RIC+ DFHN + SMKAS VM+ AYRLL M G DYP+HLGVTEAG
Sbjct: 197 MVESALECIRICQSFDFHNLVVSMKASRVPVMLAAYRLLAQRMDKAGMDYPIHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDT+RVSLTE PEKEI C L +LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLAEGIGDTLRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 316
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R L + + + +++P+ H+ + I + + LL +G+GD L L EA
Sbjct: 231 AYRLLAQRMDKAGMDYPI--HLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTLRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ I
Sbjct: 289 PEKEIP----VCYSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + LI LIK RW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKTPGYISLYRGRDEIER-VPEAEGVAKLIALIKADDRW 403
Query: 735 AEP 737
+P
Sbjct: 404 VDP 406
>gi|425443332|ref|ZP_18823552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9717]
gi|389715394|emb|CCI00228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9717]
Length = 406
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLTTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V A R + + + E +++P+ H+ + I + + LL DG+GD + L
Sbjct: 229 VAAYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 286
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+
Sbjct: 287 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGL 342
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK G
Sbjct: 343 DIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADG 401
Query: 733 RWAEP 737
RW EP
Sbjct: 402 RWVEP 406
>gi|113477916|ref|YP_723977.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Trichodesmium
erythraeum IMS101]
gi|122964399|sp|Q10W70.1|ISPG_TRIEI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|110168964|gb|ABG53504.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Trichodesmium
erythraeum IMS101]
Length = 406
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR+V VG++ IG HP+ VQ+M DT D+ +V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRSVKVGDITIGGGHPVVVQSMINEDTLDIERSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A + EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSIAHAKSLGEIKQKLAETYKPVPLVADVHHNGMKIALEVAKQVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
Q E+ EYT E+++ I + PLV + +A+RIG NHGSLS+R++ YGD+P G
Sbjct: 137 QAERNEYTQAEFEEIGDKIRQTLKPLVVSLRDQNKAMRIGVNHGSLSERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC L ++N + S+KAS VM+ AYRL+V M G YPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLKYYNLVISLKASRVPVMLAAYRLMVKRMDELGMPYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+G+ GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGDYGRVKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E + +P+ H+ D + + +G LL +G+GD + L EA
Sbjct: 231 AYRLMVKRMDELGMPYPL--HLGVTEAGDGDYGRVKSTAGIGTLLAEGIGDTIRVSLTEA 288
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+ + E+RE T HL G+ I
Sbjct: 289 PEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLENVLHEVREATKHLTGLDI 344
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + Q + LI LIK GRW
Sbjct: 345 AVMGCIVNGPGEMADADYGYVGKQSGYISLYRGREEIKK-VHESQGVEELINLIKADGRW 403
Query: 735 AEP 737
EP
Sbjct: 404 VEP 406
>gi|56750826|ref|YP_171527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 6301]
gi|81299524|ref|YP_399732.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 7942]
gi|73621106|sp|Q5N3W3.1|ISPG_SYNP6 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|123557259|sp|Q31QC4.1|ISPG_SYNE7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|56685785|dbj|BAD79007.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168405|gb|ABB56745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 7942]
Length = 407
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR+V VG++ IGS HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 RRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLGH 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L ++PLVAD+H +AL VA+ DK+R+NPG + + +
Sbjct: 80 AKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPDPNRQG 139
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT +E+++ + I + PLV ++ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 140 YTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 199
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF R+C ++DF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+G+ GR
Sbjct: 200 EFLRLCEEMDFRNLVISMKASRAPVMMAAYRLMAKRMDDLGMDYPLHLGVTEAGDGDYGR 259
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS +GIGTLL +G+GDTIRVSLTE PE EI C L LG+R ++ P
Sbjct: 260 IKSTVGIGTLLAEGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACP 313
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + + +++P+ H+ D I + +G LL +G+GD + L EA
Sbjct: 228 AYRLMAKRMDDLGMDYPL--HLGVTEAGDGDYGRIKSTVGIGTLLAEGIGDTIRVSLTEA 285
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P + +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+ I
Sbjct: 286 PENEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATNHLVGLDI 341
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + EQ + LI LIK GRW
Sbjct: 342 AVMGCIVNGPGEMADADYGYVGKTPGTIALYRGRDEIKR-VPEEQGVEELINLIKADGRW 400
Query: 735 AEP 737
EP
Sbjct: 401 VEP 403
>gi|209402477|gb|ACI45961.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase precursor [Pyropia yezoensis]
Length = 484
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 186/280 (66%), Gaps = 1/280 (0%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S +RRKTR V VG+++IG +P+ VQ+M DT DV + + + G ++VR+T
Sbjct: 83 STGAVIRRKTRAVRVGDISIGGGNPVVVQSMINEDTLDVDNATASIRALHEIGCEMVRVT 142
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
A A IK L + ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 143 CVSMAHAHAVGFIKEKLRAEYQDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 202
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EY+D+E+ + ++ +PLV K+ G+A+RIG NHGSL++R+M YGD+PRG
Sbjct: 203 KEGRTEYSDEEFNRLKDKLKATLTPLVLSLKEQGKAMRIGVNHGSLAERMMFTYGDTPRG 262
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA E ICR+LDFHN + SMKAS VM+ AYR L + G+DYP+HLGVTEAG
Sbjct: 263 MVESAMECIEICRELDFHNLVISMKASKVPVMIAAYRQLALRLDAEGYDYPIHLGVTEAG 322
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
+GE GR+KS+IGIGTLL +G+GDT+RVSLTE P KEI C
Sbjct: 323 DGEYGRVKSSIGIGTLLGEGIGDTLRVSLTENPMKEIPVC 362
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 128/223 (57%), Gaps = 15/223 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E +EI +++D ++ + ++ + + A R+L L ++P+ H+
Sbjct: 265 ESAMECIEICRELDFHNLVISMKASKVPV-MIAAYRQLALRLDAEGYDYPI--HLGVTEA 321
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
+ + + +G LL +G+GD L L E P ++ + +LQ +R T TE
Sbjct: 322 GDGEYGRVKSSIGIGTLLGEGIGDTLRVSLTENPMKEIPV----CYGILQALNLRRTMTE 377
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHL----PGVSIAIMGCIVNGPGEMADADFGYVGG 697
+V+CPSCGRTLFDL+++ A++R T HL P +SI+++GCIVNGPGEMADAD+GYVG
Sbjct: 378 WVACPSCGRTLFDLEDVLADVRAATKHLDKLDPPISISVLGCIVNGPGEMADADYGYVGS 437
Query: 698 APGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
G I LY K V+K + + AL++L++ G W +PP E
Sbjct: 438 KAGYITLYRRKEVIKT-VPQAEGVKALVELLQSDGVWLDPPVE 479
>gi|87302162|ref|ZP_01084987.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 5701]
gi|87283087|gb|EAQ75043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 5701]
Length = 414
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y IH RRKTR+V VG+V +GSEHP+ VQ+M DT D+ G + R+ + G ++
Sbjct: 24 RYDTLIH---RRKTRSVRVGDVWVGSEHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEI 80
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFA 193
VR+TV A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG +
Sbjct: 81 VRLTVPSLAHAKAVGEIRKRLEDSYQPVPLVADVHHNGMKIALEVAQHVDKVRINPGLYV 140
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
+ + E+T +E + I+ PLV ++ +A+RIG NHGSL++R++ YGD
Sbjct: 141 FDKPDPNRTEFTPEEVEAIGARIQATLEPLVSLLREQDKALRIGVNHGSLAERMLFTYGD 200
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF IC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGV
Sbjct: 201 TPLGMVESAMEFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMADRMDAGGFHYPLHLGV 260
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQ 372
TEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 261 TEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEY 320
Query: 373 GVAP 376
P
Sbjct: 321 VACP 324
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + ++P+ H+ D I + + LL +GLGD + L
Sbjct: 237 LAAYRMMADRMDAGGFHYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLT 294
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ +R T+HL G+
Sbjct: 295 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHVVRNATAHLTGL 350
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + ALI LIK+ G
Sbjct: 351 DIAVMGCIVNGPGEMADADYGYVGKTPGTISLYRGRDEIRR-VPEAEGVQALIALIKEDG 409
Query: 733 RWAEP 737
RW +P
Sbjct: 410 RWVDP 414
>gi|194477281|ref|YP_002049460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paulinella
chromatophora]
gi|171192288|gb|ACB43250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paulinella
chromatophora]
Length = 415
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 188/294 (63%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG V IGSEHP+ VQ+M DT D+ V + ++D G ++VR+T
Sbjct: 31 RRPTRTVMVGRVPIGSEHPVVVQSMINEDTLDIDKAVISIRSLSDAGCEIVRLTTPSIAH 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L ++ +PLVAD+H +AL DKIR+NPG F +A +
Sbjct: 91 AKAVGEIRRRLREQKCYVPLVADVHHNGIKIALEALNHVDKIRINPGLFIFDKADSNRDG 150
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++ +EYQ + I F PLV+ K+ +A+RIG NHGSL++R++ +GD+P+GMVESA
Sbjct: 151 FSAEEYQAIGERIRLSFEPLVQSLKEKNKALRIGVNHGSLAERMLFIHGDTPKGMVESAM 210
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS +M+ AYRL+ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 211 EFIRICHRLDFHNIVVSMKASRTAIMLAAYRLMAQTMDNEGFRYPLHLGVTEAGDGDYGR 270
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI LL DGLGDTIRVSLTE PE EI L +LG+R ++ P
Sbjct: 271 IKSTAGIAPLLCDGLGDTIRVSLTEAPENEIPVGYSILQSLGLRKTMVEYVACP 324
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + +P+ H+ D I + + LL DGLGD + L
Sbjct: 237 LAAYRLMAQTMDNEGFRYPL--HLGVTEAGDGDYGRIKSTAGIAPLLCDGLGDTIRVSLT 294
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP + +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+
Sbjct: 295 EAPENEIP----VGYSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATAHLTGL 350
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ + + + + DALI LIK+ G
Sbjct: 351 DIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGREEICK-VPETEGVDALISLIKEDG 409
Query: 733 RWAEP 737
RW +P
Sbjct: 410 RWIDP 414
>gi|411119074|ref|ZP_11391454.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoriales cyanobacterium JSC-12]
gi|410710937|gb|EKQ68444.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoriales cyanobacterium JSC-12]
Length = 411
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 28 RRKTRPVPVGSITIGGGYPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAH 87
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI++ + Q +PLVAD+H +AL A+ D +R+NPG + + + ++ E
Sbjct: 88 AKAMEEIRHKINQSYKPVPLVADVHHNGLKIALEAAKHVDNVRINPGLYVFEKPKSDRTE 147
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I E PLV K+ +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 148 YTQAEFDDIGEKIRETLEPLVLTLKEQDKSMRIGVNHGSLAERMLFTYGDTPEGMVESAL 207
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 208 EFIRICESLDFYNLEISLKASKVPVMIAANRLMVERMDALGMDYPLHLGVTEAGDGEYGR 267
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 268 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 321
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + E + +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 234 IAANRLMVERMDALGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 291
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ + +LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 292 EAPEKEIPV----CYGILQALGLRRTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 347
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
+IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + E+ LI LIK G
Sbjct: 348 NIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPEEEGVQELINLIKSDG 406
Query: 733 RWAEP 737
W +P
Sbjct: 407 LWIDP 411
>gi|22298539|ref|NP_681786.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermosynechococcus elongatus BP-1]
gi|32129680|sp|Q8DK70.1|ISPG_THEEB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|22294719|dbj|BAC08548.1| tlr0996 [Thermosynechococcus elongatus BP-1]
Length = 402
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/295 (47%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V +G+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 18 VRRKTRPVPIGSVVIGGGHPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSLA 77
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI++ L + +PLVAD+H +AL VA+ D +R+NPG + + + +
Sbjct: 78 HAKAMEEIRDRLYKTYKPVPLVADVHHNGMKIALEVAKYVDNVRINPGLYVFEKPKPNRT 137
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 138 EYTQAEFDEIGAKIRETLEPLVISLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESA 197
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC L+F+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 198 LEFIRICESLNFYNLEISLKASRVPVMIAANRLMVKRMDELGMDYPLHLGVTEAGDGEYG 257
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 258 RIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 312
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + + LL +G+GD + L
Sbjct: 225 IAANRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLT 282
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ + +LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 283 EAPEKEIPV----CYGILQALGLRRTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 338
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
+IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ VK+ + + AL++LIK G
Sbjct: 339 NIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEVKK-VPEAEGVAALVELIKADG 397
Query: 733 RWAEP 737
RW +P
Sbjct: 398 RWVDP 402
>gi|449017461|dbj|BAM80863.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanidioschyzon merolae strain 10D]
Length = 507
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G V + R+ + G ++VR+TV
Sbjct: 94 RRKTRAVRVGDVYIGGGNPVVVQSMINEDTLDIEGCVASIRRLHEAGCEVVRLTVPSMAH 153
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L + ++PLVAD+H ++AL VA+ DK+R+NPG + + + E
Sbjct: 154 AHAVGFIKQRLRETYRDVPLVADVHHNGMNIALEVAKHVDKVRINPGLYVFEKPDPNRTE 213
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+ +++ Q ++E PL+ ++ +A+RIG NHGSLS+R++ YGD+P GMVESA
Sbjct: 214 YSRADFEAAAQKLKETLKPLILSLREQDKAMRIGVNHGSLSERMLFTYGDTPEGMVESAL 273
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E R+CR+LDFHN + SMKAS VM+ AYRLL + DYP+HLGVTEAG+GE GR
Sbjct: 274 ECIRVCRELDFHNLVISMKASKVPVMMAAYRLLAKRLDQESMDYPIHLGVTEAGDGEYGR 333
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS+IGIG LL +G+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 334 IKSSIGIGGLLAEGIGDTIRVSLTEDPVKEIPVCYGILQALGLRRTMVEYVACP 387
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 132/221 (59%), Gaps = 17/221 (7%)
Query: 525 DESYEELEILKDIDATMILHDL--PFNEDKIGRVQAARRLF-EYLSENNLNFPVIHHIQF 581
+ + E + + +++D H+L K+ + AA RL + L + ++++P+ H+
Sbjct: 270 ESALECIRVCRELD----FHNLVISMKASKVPVMMAAYRLLAKRLDQESMDYPI--HLGV 323
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
+ I + +G LL +G+GD + L E P ++ + +LQ +R T
Sbjct: 324 TEAGDGEYGRIKSSIGIGGLLAEGIGDTIRVSLTEDPVKEIPV----CYGILQALGLRRT 379
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
EYV+CPSCGRTLF+++E+ ++R+ T H+PG+SIA+MGCIVNGPGEMADAD+GYVG
Sbjct: 380 MVEYVACPSCGRTLFNIEEVLHKVRDATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKT 439
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPA 739
PGKI LY G+ + R + Q LI+L+K+ G W +PPA
Sbjct: 440 PGKISLYRGREEI-RTVPENQGVAELIKLMKEDGVWVDPPA 479
>gi|254432225|ref|ZP_05045928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanobium sp.
PCC 7001]
gi|197626678|gb|EDY39237.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanobium sp.
PCC 7001]
Length = 417
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/318 (45%), Positives = 196/318 (61%), Gaps = 4/318 (1%)
Query: 63 ASEGSPLLVPRQKYCESIHKTV--RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
++ SP +P + TV RRKTR+V VG+V +GS+HP+ VQ+M DT DV G
Sbjct: 10 SAASSPAGLPADWASNPRYDTVIRRRKTRSVRVGDVWVGSDHPVVVQSMINEDTLDVEGA 69
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVA 179
+ R+ + G ++VR+TV A A EI+ L +PLVAD+H +AL VA
Sbjct: 70 TAGIRRLHEAGCEIVRLTVPSLAHAKAVGEIRRRLEDTYRPVPLVADVHHNGMKIALEVA 129
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
+ DK+R+NPG + + + E+T +E + I+ PLV K+ + +RIG N
Sbjct: 130 QHVDKVRINPGLYVFDKPDPNRTEFTAEEVAAIGERIQTTLEPLVSLLKEQDKGLRIGVN 189
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSL++R++ YGD+P GMVESA EF IC +LDFHN + SMKAS VM+ AYR++
Sbjct: 190 HGSLAERMLFTYGDTPLGMVESAMEFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMADR 249
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 250 MDADGFPYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYS 309
Query: 360 -LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 310 ILQALGLRKTMVEYVACP 327
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 8/169 (4%)
Query: 572 NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFN 628
FP H+ D I + + LL +GLGD + L EAP ++ ++
Sbjct: 254 GFPYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPV----CYS 309
Query: 629 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMA 688
+LQ +R T EYV+CPSCGRTLF+L+E+ +R T+HL G+ IA+MGCIVNGPGEMA
Sbjct: 310 ILQALGLRKTMVEYVACPSCGRTLFNLEEVLHTVRSATAHLTGLDIAVMGCIVNGPGEMA 369
Query: 689 DADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
DAD+GYVG PG I LY G+ ++R + + DALI LIK+ GRW +P
Sbjct: 370 DADYGYVGKTPGTISLYRGREEIRR-VPEAEGVDALIALIKEDGRWVDP 417
>gi|427701994|ref|YP_007045216.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanobium
gracile PCC 6307]
gi|427345162|gb|AFY27875.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanobium
gracile PCC 6307]
Length = 417
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 186/294 (63%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG+V +GSEHP+ VQ+M DT D+ G + R+ + G ++VR+TV
Sbjct: 34 RRKTRSVRVGDVWVGSEHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEIVRLTVPSLAH 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG + + + E
Sbjct: 94 AKAVKEIRQRLEDTYQPVPLVADVHHNGMKIALEVAQHVDKVRINPGLYVFDKPDPNRTE 153
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+T +E + I+ PLV K + +RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 154 FTPEELAAIGERIQATLEPLVSLLKDQDKGLRIGVNHGSLAERMLFTYGDTPLGMVESAM 213
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF IC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 214 EFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMAFRMDAEGFHYPLHLGVTEAGDGDYGR 273
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +GLGDTIRVSLTE PEKEI C L +G+R ++ P
Sbjct: 274 IKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYAILQAMGLRKTMVEYVACP 327
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 111/184 (60%), Gaps = 11/184 (5%)
Query: 558 AARRLFEY-LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLE 613
AA R+ + + ++P+ H+ D I + + LL +GLGD + L E
Sbjct: 241 AAYRMMAFRMDAEGFHYPL--HLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTE 298
Query: 614 APGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS 673
AP ++ + +LQ +R T EYV+CPSCGRTLF+L+E+ +R T+HL G+
Sbjct: 299 APEKEIPV----CYAILQAMGLRKTMVEYVACPSCGRTLFNLEEVLHTVRNATAHLTGLD 354
Query: 674 IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ ++R + + +ALI LIK+ GR
Sbjct: 355 IAVMGCIVNGPGEMADADYGYVGKTPGTISLYRGREEIRR-VPEAEGVEALIALIKEDGR 413
Query: 734 WAEP 737
W +P
Sbjct: 414 WVDP 417
>gi|402846789|ref|ZP_10895098.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
sp. oral taxon 279 str. F0450]
gi|402267481|gb|EJU16876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
sp. oral taxon 279 str. F0450]
Length = 598
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 179/279 (64%), Gaps = 4/279 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V +G+ +G ++P+RVQ+M T T D V + RI GA+ +R T Q KR
Sbjct: 19 RRRAALVHIGDTPLGGDYPVRVQSMATASTLDTEAAVAQAERIISAGAEYLRYTAQDKRV 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + PLVADIHF P+ A E +K+RVNPGN+ D + E+
Sbjct: 79 ATNLGVIHKELRARGITTPLVADIHFNPTAADTALEYVEKVRVNPGNYVDSKGT---TEW 135
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
D+ Y+ + + E F VE+ K RA+RIG NHGSLS+R++ YGD+P GMV+S E
Sbjct: 136 NDEVYRAMHEKVRERFGAFVERAKTLKRAIRIGVNHGSLSERMVMLYGDTPEGMVQSCLE 195
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGR 323
+ +CR+ DFH+ + SMK+SN VVM A RLLVA + G+ YPLHLGVTEAGEGEDGR
Sbjct: 196 YLDVCREHDFHDIVISMKSSNTVVMTAAVRLLVARLDELGYPAYPLHLGVTEAGEGEDGR 255
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
+KSA+GIG+LL DG+GDTIRVSL+E PE EI R L +
Sbjct: 256 IKSAVGIGSLLADGIGDTIRVSLSEEPECEIPVARALVD 294
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 103/144 (71%)
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A + G++ +DG G+GL LEAP + + T +LQ R+R +KTE++SCP CGRTL+
Sbjct: 454 AAADCGSIFLDGWGNGLCLEAPHLPAEEIIKTELGILQAARLRMSKTEFISCPGCGRTLY 513
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
+LQ AEI+ TSHL G+ + IMGCIVNGPGEMADAD+GYVG APGKIDLY G+ +K+
Sbjct: 514 NLQNTIAEIKAATSHLKGLKVGIMGCIVNGPGEMADADYGYVGAAPGKIDLYKGQECIKK 573
Query: 714 GIAMEQATDALIQLIKDHGRWAEP 737
G+ QA + LI LIK+ G W +P
Sbjct: 574 GVPQAQAVEHLIDLIKEGGDWKDP 597
>gi|188994862|ref|YP_001929114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
gi|188594542|dbj|BAG33517.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
Length = 581
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 179/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P VA +K+R+NPGNF + ++ E
Sbjct: 69 AANLQHIHAGLCRLGYHIPLVADIHFSPKVAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
Query: 521 SLRGDESYEE-LEILKDI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHH 578
S+R D+ ++ L+ ++ I D +IL + N V R + L PVI H
Sbjct: 369 SIRQDDLTDDCLQTIEAISDTVIILESVGINP-----VAEWRAMLHRLELAGCRCPVILH 423
Query: 579 IQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
++ + +DL + A ++GA+L++G G+GL++ A + +F +LQ R+R +
Sbjct: 424 RRY-DCTDLEDLQLQASADMGAILLEGRGNGLMITADKLPSVAVNHLAFGILQATRLRMS 482
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
+TEY+SCPSCGRTL++LQE A I+ T+HL + I IMGCIVNGPGEMADAD+GYVG
Sbjct: 483 RTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAG 542
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PG+IDLY K V+RGI EQA LI+LIK++G W E
Sbjct: 543 PGRIDLYKQKICVRRGIPQEQAVQQLIELIKENGDWKE 580
>gi|427711938|ref|YP_007060562.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 6312]
gi|427376067|gb|AFY60019.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 6312]
Length = 405
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 190/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V VG++ IG +P+ VQ+M DT D+ G V + R+ + G ++VR+TV
Sbjct: 21 VRRKTRPVPVGSITIGGGYPVAVQSMINEDTLDIPGAVAGIRRLHEIGCEIVRVTVPSMA 80
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI+ +L + +PLVAD+H +AL V++ D +R+NPG + + + ++
Sbjct: 81 HAKAMAEIRATLEKTYQPVPLVADVHHNGMKIALEVSKYVDNVRINPGLYVFEKPKADRT 140
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + + I E PLV + +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 141 EYTQAEFDEIGEKIRETLEPLVISLRDQNKSMRIGVNHGSLAERMLFTYGDTPAGMVESA 200
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF R+C ++F+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 201 LEFIRLCEDMNFYNLEISLKASRVPVMIAANRLMVKRMDELGMDYPLHLGVTEAGDGEYG 260
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 261 RIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 315
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 228 IAANRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 285
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ + +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+
Sbjct: 286 EAPEKEIPV----CYGILQALGLRRTMVEYVACPSCGRTLFNLEEVLQKVRNATNHLTGL 341
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
+IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ V + + +Q ALI LIK
Sbjct: 342 NIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRDEVTK-VPEDQGVAALIDLIKSDD 400
Query: 733 RWAEP 737
RW +P
Sbjct: 401 RWVDP 405
>gi|334146672|ref|YP_004509600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis TDC60]
gi|333803827|dbj|BAK25034.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis TDC60]
Length = 581
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P A +K+R+NPGNF + ++ E
Sbjct: 69 AANLQHIHAGLCRLGYHIPLVADIHFSPKAAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
Query: 521 SLRGDESYEE-LEILKDI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHH 578
S+R D+ ++ L+ ++ I D +IL + N V R + L PVI H
Sbjct: 369 SIRQDDLTDDCLQTIEAISDTVIILESVGLNP-----VAEWRAMLHRLELAGCRCPVILH 423
Query: 579 IQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
++ + +DL + A ++GA+L++G G+GL++ A + +F +LQ R+R +
Sbjct: 424 RRY-DCTDLEDLQLQASADMGAILLEGRGNGLMITADKLPSVAVNHLAFGILQATRLRMS 482
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
+TEY+SCPSCGRTL++LQE A I+ T+HL + I IMGCIVNGPGEMADAD+GYVG
Sbjct: 483 RTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAD 542
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PG+IDLY K V+RGI EQA LI+LIK++G W E
Sbjct: 543 PGRIDLYKQKICVRRGIPQEQAVQQLIELIKENGDWKE 580
>gi|34540704|ref|NP_905183.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W83]
gi|419970797|ref|ZP_14486274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W50]
gi|50400933|sp|Q7MVT7.1|ISPG_PORGI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|34397018|gb|AAQ66082.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Porphyromonas gingivalis W83]
gi|392610020|gb|EIW92812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W50]
Length = 581
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P A +K+R+NPGNF + ++ E
Sbjct: 69 AVNLQHIHAGLCRLGYHIPLVADIHFSPKAAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
Query: 521 SLRGDESYEE-LEILKDI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHH 578
S+R D+ ++ L+ ++ I D +IL + N V R + L PVI H
Sbjct: 369 SIRQDDLTDDCLQTIEAISDTVIILESVGINP-----VAEWRAMLHRLELAGCRCPVILH 423
Query: 579 IQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNT 638
++ + +DL + A ++GA+L++G G+GL++ A + +F +LQ R+R +
Sbjct: 424 RRY-DCTDLEDLQLQASADMGAILLEGRGNGLMITADKLPSVAVNHLAFGILQATRLRMS 482
Query: 639 KTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGA 698
+TEY+SCPSCGRTL++LQE A I+ T+HL + I IMGCIVNGPGEMADAD+GYVG
Sbjct: 483 RTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAG 542
Query: 699 PGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 736
PG+IDLY K V+RGI EQA LI+LIK++G W E
Sbjct: 543 PGRIDLYKQKICVRRGIPQEQAVQQLIELIKENGDWKE 580
>gi|220909019|ref|YP_002484330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 7425]
gi|254806874|sp|B8HSI6.1|ISPG_CYAP4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|219865630|gb|ACL45969.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7425]
Length = 407
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 VRRKTRPVPVGSITIGGGNPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMA 82
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI+ L + +PLVAD+H +AL VA D +R+NPG + + + ++
Sbjct: 83 HAKAMAEIRAKLHRTYKPVPLVADVHHNGLKIALEVANHVDNVRINPGLYVFEKPKADRT 142
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + I E PLV K +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 EYTQAEFDEIGAKIRETLEPLVLSLKTQNKSMRIGVNHGSLAERMLFTYGDTPEGMVESA 202
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC L +++ S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 203 LEFIRICESLGYYHLEISLKASRVPVMLAANRLMVQRMDELGMDYPLHLGVTEAGDGEYG 262
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 RIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
+ A R + + + E +++P+ H+ + I + +G LL +G+GD + L
Sbjct: 230 LAANRLMVQRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLT 287
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGV 672
EAP ++ +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+
Sbjct: 288 EAPEKEIPV----CYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGL 343
Query: 673 SIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHG 732
IA+MGCIVNGPGEMADAD+GYVG G I LY G+ VK+ + +Q + LI LIK G
Sbjct: 344 DIAVMGCIVNGPGEMADADYGYVGKQAGHISLYRGREEVKK-VPEDQGVEELINLIKADG 402
Query: 733 RWAEP 737
RW +P
Sbjct: 403 RWVDP 407
>gi|404404690|ref|ZP_10996274.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
sp. JC136]
Length = 499
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 175/283 (61%), Gaps = 21/283 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ + +RR V +G VAIG +HP+ VQ+MT DT D A +V ++ RI G +VR+T
Sbjct: 8 NLSEFIRRPACEVRIGGVAIGGKHPVAVQSMTNTDTNDTAASVAQIERIDRAGGHIVRLT 67
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L + +VADIHF P VA A+ DK+R+NPGN+ +
Sbjct: 68 AQGRREGENLGNIVRQLRADGFRTAVVADIHFVPEVAAVAAKYVDKVRINPGNYRTDHGE 127
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
FE L +E+C++ G A+RIG NHGSL+ R+ +GD+P+GM
Sbjct: 128 FEAL---------------------IEQCRERGVALRIGVNHGSLAKRVFDEWGDTPQGM 166
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ DF + SMK+SN VMV AYRLLV M YP+HLGVTEAG
Sbjct: 167 VVSAMEFLRVCRERDFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGN 226
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
G +GR+KSA+GIG L+ DG+GDTIRVSLTE PE EI R LA
Sbjct: 227 GIEGRVKSAVGIGALMADGIGDTIRVSLTEAPENEIPVARLLA 269
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 96/128 (75%)
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
DG+ ++APG + +R+ +LQ R+R ++TEY++CPSCGRTL+D+++ A+IR +T
Sbjct: 370 ADGIWIDAPGFSEESIREIELMILQAARVRFSRTEYIACPSCGRTLYDIEKTLADIRART 429
Query: 667 SHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
SHL + I +MGCIVNGPGEMADAD+GYVG PG+I LY G+ VV+R I E+A D LI+
Sbjct: 430 SHLKNLRIGVMGCIVNGPGEMADADYGYVGAGPGRITLYKGREVVERNIPQEEALDRLIE 489
Query: 727 LIKDHGRW 734
LI+ +G W
Sbjct: 490 LIRANGDW 497
>gi|452822762|gb|EME29778.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Galdieria
sulphuraria]
Length = 445
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 185/294 (62%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG P+ VQ+M DT + V + + + G ++VR+TV
Sbjct: 40 RRKTRPVWVGDVCIGGGSPVVVQSMINEDTLQIDRCVTAIRNLHEAGCEIVRLTVPSLAH 99
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L + ++PLVAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 100 AYAVGFIKQKLKETYQDVPLVADVHHNGLKIALEVAKHVEKVRINPGLYVFEKRDPNRTE 159
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+Q ++E PL+ + G+A+RIG NHGSLS+R++ +GD+P+GMVESA
Sbjct: 160 YTKKEFQSMKDKLKETLKPLIVTLRDQGKAMRIGVNHGSLSERMLFTFGDTPQGMVESAL 219
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E R+C +LDFHN + SMKAS VM+ AYRLL M G+ YP HLGVTEAG+GE GR
Sbjct: 220 ECIRVCEELDFHNLVISMKASKVPVMLAAYRLLAKRMDEEGFHYPFHLGVTEAGDGEYGR 279
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS +GIGTLL +G+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 280 IKSTLGIGTLLAEGIGDTIRVSLTEDPVKEISVCYGILQGLGLRRTMVEYVACP 333
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R L + + E ++P H+ + I + +G LL +G+GD + L E
Sbjct: 248 AYRLLAKRMDEEGFHYPF--HLGVTEAGDGEYGRIKSTLGIGTLLAEGIGDTIRVSLTED 305
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ + +LQG +R T EYV+CPSCGRTLF ++++ ++RE T H+PG+SI
Sbjct: 306 PVKEIS----VCYGILQGLGLRRTMVEYVACPSCGRTLFHIEDVLHQVREATKHMPGLSI 361
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY GK + R + E LI L+K G W
Sbjct: 362 AVMGCIVNGPGEMADADYGYVGKTRGYISLYRGKEEI-RVVKEEYGVKELINLLKQDGVW 420
Query: 735 AEPPAE 740
+PP E
Sbjct: 421 KDPPYE 426
>gi|167754010|ref|ZP_02426137.1| hypothetical protein ALIPUT_02297 [Alistipes putredinis DSM 17216]
gi|167658635|gb|EDS02765.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
putredinis DSM 17216]
Length = 501
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 171/276 (61%), Gaps = 21/276 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ K RR +R V +G V IG + PI VQ+MT DTKD + ++ RI G +VR+T
Sbjct: 2 NLTKYERRPSREVRIGRVVIGGDRPIAVQSMTNTDTKDTEACIRQIERIFRAGGPIVRLT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L ++ + +VADIHF P VA A+ DK+R+NPGN+ +
Sbjct: 62 AQGRREGENLERIVRRLREEGCDAAVVADIHFVPEVAAIAAKYVDKVRINPGNYNSSHGE 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
FE L +++C++ G A+RIG NHGSLS R+ +GD+P GM
Sbjct: 122 FEAL---------------------IDRCRERGVAIRIGVNHGSLSKRVFDEWGDTPEGM 160
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ F + SMK+SN VMV AYRLL M G DYPLHLGVTEAG
Sbjct: 161 VASAMEFLRVCREKAFDQVVVSMKSSNTRVMVAAYRLLAEAMEREGMDYPLHLGVTEAGN 220
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +GR+KSA+GIG LL DG+GDTIRVSLTE PE EI
Sbjct: 221 GIEGRIKSAVGIGALLADGIGDTIRVSLTEAPENEI 256
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 104/141 (73%)
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
++G+L +DGL DG+ ++AP + + +LQ R+R ++TEY++CPSCGRTL+D++
Sbjct: 354 DLGSLFLDGLADGIRIDAPHLSEKEIAEIELMILQAARVRMSRTEYIACPSCGRTLYDIE 413
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
A IR +TSHL + I +MGCIVNGPGEMADAD+GYVG APG+I LY G+TVV++ I
Sbjct: 414 GTLAAIRARTSHLKNLKIGVMGCIVNGPGEMADADYGYVGAAPGRITLYKGRTVVEKNIP 473
Query: 717 MEQATDALIQLIKDHGRWAEP 737
E+A D L+ LIK +G WA+P
Sbjct: 474 QEEALDRLVALIKANGDWADP 494
>gi|284929237|ref|YP_003421759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[cyanobacterium UCYN-A]
gi|284809681|gb|ADB95378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[cyanobacterium UCYN-A]
Length = 407
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 191/308 (62%), Gaps = 5/308 (1%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
V +Q+ +IH RR+TR V VG++ IG P+ VQ+M DT D+ +V + ++ +
Sbjct: 13 VSKQEIDTTIH---RRQTRPVKVGDITIGGGFPVVVQSMINEDTLDIESSVNAIRKLHEI 69
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNP 189
G ++VR+TV A A IK L + +PLVAD+H +AL VA+ DK+RVNP
Sbjct: 70 GCEIVRVTVPSMAHAKALAAIKRRLNETYQPVPLVADVHHNGLKIALEVAKHVDKVRVNP 129
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
G + + + +Y+ E+++ + I + PL+ + G+A+RIG NHGSL++R++
Sbjct: 130 GLYVFEKHDINRSDYSQKEFKEIGEIIRKTLEPLIISLRDQGKAMRIGVNHGSLAERMLF 189
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YGD+P GMVESA EF RIC L+F+N + S+KAS M+ AYRL+ M +YPL
Sbjct: 190 TYGDTPLGMVESALEFIRICESLEFYNLVISLKASRVPTMLAAYRLMAQRMNELNMNYPL 249
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAA 368
HLGVTEAG+GE GR+KS GI TLL + +GDT+RVSLTE PEKEI C L LG+R
Sbjct: 250 HLGVTEAGDGEYGRIKSTAGIATLLAESIGDTLRVSLTESPEKEISVCYGILQALGLRKT 309
Query: 369 ELQQGVAP 376
++ P
Sbjct: 310 MVEYIACP 317
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + ++E N+N+P+ H+ + I + + LL + +GD L L E+
Sbjct: 232 AYRLMAQRMNELNMNYPL--HLGVTEAGDGEYGRIKSTAGIATLLAESIGDTLRVSLTES 289
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ + +LQ +R T EY++CPSCGRTLF+L+ + ++R T HL G+ I
Sbjct: 290 PEKEIS----VCYGILQALGLRKTMVEYIACPSCGRTLFNLENVLHKVRNATQHLTGLDI 345
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + ++ + L+ LIK GRW
Sbjct: 346 AVMGCIVNGPGEMADADYGYVGKQAGYISLYRGQEEIKK-VPEDKGVEELVNLIKADGRW 404
Query: 735 AEP 737
EP
Sbjct: 405 IEP 407
>gi|261416776|ref|YP_003250459.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|385791608|ref|YP_005822731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373232|gb|ACX75977.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327389|gb|ADL26590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 579
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 187/329 (56%), Gaps = 5/329 (1%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y + K VRR+T V VG+ IG PI VQ+MTT KDV TV E + +A G LV
Sbjct: 9 YVDDRFKAVRRETVQVRVGDALIGGNAPILVQSMTTTKPKDVEKTVAETLALAKVGCGLV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +A E+ + +P+ ADIHF P A + +K+R+NPGNF D
Sbjct: 69 RITAPTFADAAGLEEVMKRVRAAGCTVPVSADIHFQPKAAFEALKWVEKVRINPGNFVDT 128
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ TD +++ + + E F+P V++ K+ GRA+RIG NHGSLS R++ YGD+
Sbjct: 129 -GILTLDQQTDKSFEEGKEKVAEAFTPFVQEAKRLGRAIRIGVNHGSLSARMIYRYGDTV 187
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV-HGWDYPLHLGVT 314
GMVESA E+ +C F + S+K+SNP V + AYRLL A + H YP H+GVT
Sbjct: 188 EGMVESAIEYLAVCEAEHFDQVVLSLKSSNPRVAISAYRLLAARLKQEHFKPYPFHVGVT 247
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG G DGR+KSA GIG LL DGL DTIRVSLTE P E+ + L A+ +
Sbjct: 248 EAGAGSDGRLKSAAGIGALLLDGLADTIRVSLTEDPVAEVPVAQELIKACELKADAPKFA 307
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEV 403
P EK ++++ R +P+ G ++
Sbjct: 308 VPVLEKDPYHYE---RRETVPVTLAGVKI 333
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 118/182 (64%), Gaps = 4/182 (2%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
V R L L N P++ + + + +D L + A ++G+L+ DGLGD ++++
Sbjct: 402 VMGVRALASALYAANRKDPILLYAKITDS-EKDTLRVSA--DIGSLVTDGLGDAVVIDGY 458
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIA 675
D + +F++LQ R +KT ++SCPSCGRTL+D+Q++ +I+ + HL +SI
Sbjct: 459 KSPKDSVI-LAFDILQAAYCRRSKTNFISCPSCGRTLYDIQQVMGKIKARFGHLQDISIG 517
Query: 676 IMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWA 735
IMGCIVNGPGEMADADFGYVGG PG+I L+ GKT VK+ I E A + L+ LIK+ GRW
Sbjct: 518 IMGCIVNGPGEMADADFGYVGGGPGRITLFEGKTAVKKNIPEEDAIEELVNLIKERGRWQ 577
Query: 736 EP 737
EP
Sbjct: 578 EP 579
>gi|291514395|emb|CBK63605.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
shahii WAL 8301]
Length = 494
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 166/276 (60%), Gaps = 21/276 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ K +RR T V +G IG HP+ Q+MT DT D A +V ++ RI G +VR+T
Sbjct: 2 NLSKFMRRTTCEVRIGRTTIGGGHPVACQSMTNTDTNDTAASVAQIERIDRAGGKIVRLT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L + +VADIHF P VA A DK+RVNPGN+ R
Sbjct: 62 AQGRREGENLENIVRQLRADGFRTAVVADIHFVPEVAAIAARYVDKVRVNPGNYRLDRGD 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
+ L + +C++ G A+R+G NHGSL+ R+ +GD+P+GM
Sbjct: 122 LQSL---------------------IAQCRERGVALRVGVNHGSLAKRVFDEWGDTPQGM 160
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ DF + SMK+SN VMV AYRLLV M YP+HLGVTEAG
Sbjct: 161 VVSAMEFLRVCRECDFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGN 220
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +GR+KSA+GIG L+ DG+GDTIRVSLTE PE EI
Sbjct: 221 GIEGRVKSAVGIGALMADGIGDTIRVSLTEAPENEI 256
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 95/128 (74%)
Query: 607 GDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT 666
DG+ ++APG +RD +LQ R+R + TEY++CPSCGRTL+D+++ A+I+ +T
Sbjct: 364 ADGIWIDAPGFAESEIRDIELMILQAVRVRFSHTEYIACPSCGRTLYDIEKALADIKART 423
Query: 667 SHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
SHL + I +MGCIVNGPGEMADAD+GYVG PG+I LY G+TVV+R I E+A D L++
Sbjct: 424 SHLKNLRIGVMGCIVNGPGEMADADYGYVGAGPGRITLYKGRTVVERNIPQEEALDRLVE 483
Query: 727 LIKDHGRW 734
LIK +G W
Sbjct: 484 LIKKNGDW 491
>gi|407958228|dbj|BAM51468.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Synechocystis
sp. PCC 6803]
Length = 360
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 171/270 (63%), Gaps = 2/270 (0%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
M DT DV G+V + R+ + G ++VR+TV A A +IK L +PLVAD+
Sbjct: 1 MINEDTLDVDGSVAGIRRLHEIGCEIVRVTVPSMAHAKALADIKQKLQATYQAVPLVADV 60
Query: 169 HF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKC 227
H +AL VA+ DK+R+NPG + + ++ Y+D E+ + + I E PLV
Sbjct: 61 HHNGMKIALEVAKHVDKVRINPGLYVFEKPDAQREGYSDQEFAEIGEKIRETLEPLVISL 120
Query: 228 KKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287
+ G+++RIG NHGSLS+R++ YGD+P GMV+SA EF +IC LDF N + SMKAS
Sbjct: 121 RDQGKSMRIGVNHGSLSERMLFTYGDTPEGMVQSALEFIKICESLDFRNLVVSMKASRVP 180
Query: 288 VMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
VM+ AYRL+V M G DYPLHLGVTEAG+GE GR+KS GI TLL DG+GDTIRVSLT
Sbjct: 181 VMLAAYRLMVKRMDELGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 240
Query: 348 EPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
E PEKEI C L LG+R ++ P
Sbjct: 241 EAPEKEIPVCYSILQALGLRKTMVEYVACP 270
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 109/183 (59%), Gaps = 10/183 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEA 614
A R + + + E +++P+ H+ + I + + LL DG+GD + L EA
Sbjct: 185 AYRLMVKRMDELGMDYPL--HLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLTEA 242
Query: 615 PGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 674
P ++ +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T HL G+ I
Sbjct: 243 PEKEIP----VCYSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATKHLTGLDI 298
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRW 734
A+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + LI LIK GRW
Sbjct: 299 AVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPETDGVQELINLIKADGRW 357
Query: 735 AEP 737
+P
Sbjct: 358 VDP 360
>gi|406965083|gb|EKD90757.1| hypothetical protein ACD_30C00092G0025 [uncultured bacterium]
Length = 398
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 180/286 (62%), Gaps = 5/286 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG V IG + PI VQTM T DV V +++ + GA+LVR+TV+ R+
Sbjct: 8 RRQTRAVRVGEVFIGGDSPILVQTMANEKTYDVPKVVSQIVNLKRAGAELVRVTVETMRD 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPG--NFADRRAQFEQ 201
A A I+ L +PL ADIH +AL + DK+RVNPG F D R + +
Sbjct: 68 AKALPGIRQGLNDLGVGVPLSADIHHRGTGLALEAVKWVDKVRVNPGLLAFGDGRTETKD 127
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
EYT E ++ + ++ P+++ CK+ G A+RIG NHGSLS+ +M +GD+P GMVES
Sbjct: 128 -EYTPLEIEQRHEENKKALEPIIKSCKERGVAMRIGVNHGSLSNMMMVRFGDTPLGMVES 186
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ ++C +LDF + + S+KAS VM A RL+V M DYPLHLG+TEAG G++
Sbjct: 187 ALEYIKLCEELDFKDIIVSLKASRVSVMQGANRLMVKRMDQESMDYPLHLGLTEAGNGQE 246
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMR 366
GR+KS +G LLQ+G+GDTIRVSLTE P E+ C L LG+R
Sbjct: 247 GRVKSVAALGPLLQEGIGDTIRVSLTENPINELSVCFDLLQALGIR 292
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 126/220 (57%), Gaps = 12/220 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF-EYLSENNLNFPVIHHIQFPN 583
+ + E +++ +++D I+ + ++ +Q A RL + + + ++++P+ H+
Sbjct: 185 ESALEYIKLCEELDFKDII--VSLKASRVSVMQGANRLMVKRMDQESMDYPL--HLGLTE 240
Query: 584 GIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKT 640
+ + + + +G LL +G+GD + L E P + F+LLQ +R K
Sbjct: 241 AGNGQEGRVKSVAALGPLLQEGIGDTIRVSLTENPINELSV----CFDLLQALGIRKEKA 296
Query: 641 EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 700
E + CPSCGRT +L+ E++++ +HL ++++ MGC+VNGPGE AD+D+G++G G
Sbjct: 297 EIIGCPSCGRTKINLEPHLNELKKRAAHLKDLTLSGMGCVVNGPGESADSDYGFIGLGEG 356
Query: 701 KIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
K+ + G V G+ +QA +++I+LIK GRW +PP +
Sbjct: 357 KVAITRGAEQVLAGVNEDQAVESIIELIKADGRWVDPPKD 396
>gi|37523191|ref|NP_926568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeobacter
violaceus PCC 7421]
gi|50400938|sp|Q7NFA4.1|ISPG_GLOVI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|35214194|dbj|BAC91563.1| gll3622 [Gloeobacter violaceus PCC 7421]
Length = 396
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 4/295 (1%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR V VG + IG P+ VQ+M DT D G V + + G +LVR+TV
Sbjct: 14 LRRVTRPVQVGALTIGGNAPVVVQSMINEDTLDTPGAVAAIRALHKAGCELVRVTVPSLA 73
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A I+ +L +PLVAD+H +AL VA DK+R+NPG F RRA+
Sbjct: 74 HARALERIRKTLEDTYRPVPLVADVHHDGGPIALEVARHVDKVRINPGLFVFRRARLG-- 131
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
+YT ++ ++ I E PLV+ +A+RIG NHGSLS+R++ +GD+P GMV+SA
Sbjct: 132 DYTAEDVERARAQIREELKPLVDVLGAQDKAMRIGVNHGSLSERMLYIHGDTPEGMVQSA 191
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF IC +L +HN + S+KAS VM+ YRL + G YP HLGVTEAG+GE G
Sbjct: 192 VEFVEICEQLGYHNLVISLKASRVPVMIAVYRLAAKLLDARGMHYPFHLGVTEAGDGEYG 251
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL DG+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 252 RIKSTAGIATLLADGIGDTIRVSLTEDPLKEIPVCYGILQALGLRRTMVEYVACP 306
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + + LL DG+GD + L E P ++ + +LQ +R T EYV+CPSC
Sbjct: 253 IKSTAGIATLLADGIGDTIRVSLTEDPLKEIPV----CYGILQALGLRRTMVEYVACPSC 308
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
GRTLF+L+ + +RE T HL G++IA+MGCIVNGPGEMADAD+GYVG PG I LY G+
Sbjct: 309 GRTLFNLETVLHRVREATRHLTGLNIAVMGCIVNGPGEMADADYGYVGKTPGTISLYRGR 368
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+K+ + + +AL+ LIK GRW +P
Sbjct: 369 EEIKK-VPEARGVEALVDLIKSDGRWVDP 396
>gi|334364747|ref|ZP_08513727.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes sp.
HGB5]
gi|390946536|ref|YP_006410296.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
finegoldii DSM 17242]
gi|313159123|gb|EFR58498.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes sp.
HGB5]
gi|390423105|gb|AFL77611.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
finegoldii DSM 17242]
Length = 493
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 173/312 (55%), Gaps = 44/312 (14%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G V IG HP+ VQ+MT DT D ++ RI G +VR+T QG+RE
Sbjct: 8 RRPSGEVRIGRVVIGGGHPVAVQSMTNTDTNDTEACAAQIERIDRAGGGIVRLTAQGRRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
+ I + + ++ +VADIHF P VA A+ DK+R+NPGN+ + E L
Sbjct: 68 GENLANIVRRVREDGFDTAIVADIHFVPEVAAIAAKYVDKVRINPGNYRTDHGELEAL-- 125
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +C++ G A+RIG NHGSLS R+ +GD+P+GMV SA E
Sbjct: 126 -------------------IAQCRERGVALRIGVNHGSLSKRVFDRWGDTPQGMVVSAME 166
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C+ F + SMK+SN VMV AYRLLV M YP+HLGVTEAG G +GR+
Sbjct: 167 FLRVCKAQGFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGNGIEGRI 226
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG L+ DG+GDTIRVSLTE PE EI VA KH
Sbjct: 227 KSAVGIGALMADGIGDTIRVSLTEAPENEIP------------------VAELLVKH--- 265
Query: 385 FDFQRRSGQLPI 396
F RR G+ P+
Sbjct: 266 --FARRPGKFPV 275
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 111/150 (74%)
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
+ L + A ++G L +DGL DG+ ++APG + +R+ +LQ R+R + TEY++CPS
Sbjct: 344 ETLAVKAAADLGVLFLDGLADGIWIDAPGFAEEEIRNIELMILQAARVRFSHTEYIACPS 403
Query: 648 CGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
CGRTL+D+++ A ++ +TSHL + I +MGCIVNGPGEMADAD+GYVG APG+I LY G
Sbjct: 404 CGRTLYDIEKTLAAVKSRTSHLKNLKIGVMGCIVNGPGEMADADYGYVGAAPGRITLYKG 463
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAEP 737
+TVV+R I E+A D L++LI+D+G W EP
Sbjct: 464 RTVVERNIPQEEALDRLVELIRDNGDWVEP 493
>gi|332300592|ref|YP_004442513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica DSM 20707]
gi|332177655|gb|AEE13345.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica DSM 20707]
Length = 571
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 167/276 (60%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR + T+ VG +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 2 SLCRYQRRHSYTIPVGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + DK+R+NPGNF ++A
Sbjct: 62 AQGVREATNLGVIAERLHAEGCRMPLVADIHFRSEPAFEALKHVDKVRINPGNFLHQKAS 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + RA+RIG NHGSLS+RI++ YG++P GM
Sbjct: 122 L------DDETARA--EIAEVFGRFVREAQARHRAIRIGVNHGSLSERILAQYGNTPEGM 173
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M V W YPLHLGVTEAG
Sbjct: 174 VASCMEYLEVCDSLGMRDVVISMKASNVLVMTQAVRLLVERMDVLDWHYPLHLGVTEAGA 233
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 234 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 269
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
Query: 575 VIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCR 634
++H+ G DD++I T +G+LL++G+G+ + A D +LQ R
Sbjct: 408 LLHYTSHARGY--DDILIDCATQLGSLLLEGIGNAVAFSAAAMSPKARLDLLNGILQAVR 465
Query: 635 MRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGY 694
++ T TE++SCP CGRTLFDLQ+ A+++++ +HLP + I +MGCIVNGPGEMADAD+GY
Sbjct: 466 IKMTHTEFISCPGCGRTLFDLQQTVAQVKKRLAHLPNLKIGVMGCIVNGPGEMADADYGY 525
Query: 695 VGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
VGG GK+DLY G+ + GI +A D LI+LIK G+W +PP +
Sbjct: 526 VGGGVGKVDLYRGQERLVHGIPSAEAVDRLIELIKSDGKWCDPPQQ 571
>gi|313885895|ref|ZP_07819635.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924650|gb|EFR35419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 571
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 166/276 (60%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR + T+ VG +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 2 SLCRYQRRHSYTIPVGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + DK+R+NPGNF ++A
Sbjct: 62 AQGVREATNLGVIAERLHAEECRMPLVADIHFRSEPAFEALKHVDKVRINPGNFLHQKAS 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + RA+RIG NHGSLS+RI++ YG++P GM
Sbjct: 122 L------DDETARA--EIAEVFGRFVREAQARHRAIRIGVNHGSLSERILAQYGNTPEGM 173
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M W YPLHLGVTEAG
Sbjct: 174 VASCMEYLEVCDSLRMRDVVISMKASNVLVMTQAVRLLVERMDALDWHYPLHLGVTEAGA 233
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 234 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 269
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 109/166 (65%), Gaps = 2/166 (1%)
Query: 575 VIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCR 634
++H+ G DD++I T +G+LL++G+G+ + A D +LQ R
Sbjct: 408 LLHYTSHARGY--DDILIDCATQLGSLLLEGIGNAVAFSAAAMSPKARLDLLNGILQAVR 465
Query: 635 MRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGY 694
++ T TE++SCP CGRTLFDLQ+ A+++ + +HLP + I +MGCIVNGPGEMADAD+GY
Sbjct: 466 IKMTHTEFISCPGCGRTLFDLQQTVAQVKRRLAHLPNLKIGVMGCIVNGPGEMADADYGY 525
Query: 695 VGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
VGG GK+DLY G+ + GI +A D LI+LIK G+W +PP +
Sbjct: 526 VGGGVGKVDLYRGQERLVHGIPSAEAVDRLIELIKSDGKWCDPPQQ 571
>gi|429741394|ref|ZP_19275055.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
catoniae F0037]
gi|429158872|gb|EKY01400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
catoniae F0037]
Length = 559
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 175/286 (61%), Gaps = 6/286 (2%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
M T T D V + RI GA+ +R T Q KR A I ++L K PLVADI
Sbjct: 1 MATASTLDTEAAVAQAERIISAGAEYLRYTAQDKRVATNLGAIHHALRAKGITTPLVADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P+ A E +K+R+NPGN+ D + + + ++ Y+ + + E F VE+ K
Sbjct: 61 HFNPTAADTALEYVEKVRINPGNYVDSKGN---VAWDEEVYKSMHEKVCERFGAFVERAK 117
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ RA+RIG NHGSLS+R++ YGD+P GMV+S E+ +CR+ DFH+ + SMK+SN VV
Sbjct: 118 ELKRALRIGVNHGSLSERMVMLYGDTPEGMVQSCLEYLDVCREHDFHDIVISMKSSNTVV 177
Query: 289 MVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
M A RLLV + G+ YPLHLGVTEAGEGEDGR+K A+GIG+LL DG+GDTIRVSL+
Sbjct: 178 MTAAVRLLVERLDELGYPAYPLHLGVTEAGEGEDGRIKRAVGIGSLLADGIGDTIRVSLS 237
Query: 348 EPPEKEIDPCRRLANLGMRAAELQ--QGVAPFEEKHRHYFDFQRRS 391
E PE EI R L + + + +G P ++R+ RR+
Sbjct: 238 EEPECEIPVARALVDYIAQRETMSPPKGELPLWSEYRNLCRDARRN 283
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 106/144 (73%)
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A + G++L+DG G+GL L+ P D + TSF +LQ R+R +KTE++SCP CGRTL+
Sbjct: 409 AAADCGSILLDGWGNGLCLDNPYLSADEITKTSFGILQATRLRMSKTEFISCPGCGRTLY 468
Query: 654 DLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
+LQ AEI+ T+HL G+ I IMGCIVNGPGEMADAD+GYVG APGKIDLY G+ +K+
Sbjct: 469 NLQNTIAEIKAATAHLKGLKIGIMGCIVNGPGEMADADYGYVGAAPGKIDLYKGQECIKK 528
Query: 714 GIAMEQATDALIQLIKDHGRWAEP 737
G+ QA + LI LIK+HG W +P
Sbjct: 529 GVPQAQAVEHLINLIKEHGDWKDP 552
>gi|406883835|gb|EKD31350.1| hypothetical protein ACD_77C00344G0001 [uncultured bacterium]
Length = 451
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 166/268 (61%), Gaps = 17/268 (6%)
Query: 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREAD 146
K +V VGN+ IG+ P+ +QTM T ++ + + + +A +G+ ++R+T QG +E +
Sbjct: 2 KRVSVRVGNIIIGNTRPVVIQTMCNTPTGNIDASFNQCLELARKGSQIIRLTTQGIKEVN 61
Query: 147 ACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTD 206
A EIK L PLVAD+HF+ VA+ AE DK+R+NPGNF+ A
Sbjct: 62 ALREIKLRLHNAGITTPLVADVHFSSDVAIAAAEVADKVRINPGNFSKDPA------IAL 115
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266
+EY+K L+ CKK A+RIG NHGSL ++I+ YGDSP GM E+A E+
Sbjct: 116 EEYKK-----------LISICKKRDVAIRIGINHGSLGEKIIEKYGDSPLGMKEAALEWI 164
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
++ ++ DF + S+KASN +M AYRLL +G YPLHLGVTEAG GE GR+KS
Sbjct: 165 KMSQENDFDQIIISLKASNTRIMTDAYRLLYESFKKNGVSYPLHLGVTEAGNGESGRIKS 224
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+G+ TLL +G+GDTIRVSLTE P E+
Sbjct: 225 VVGLATLLGEGIGDTIRVSLTEDPANEL 252
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLL-------EAPGQDFDFLRDTSFNLLQGCRMRNTKT 640
++ ++ A ++G +L+D L D + L EA D RD LLQ R + TK
Sbjct: 294 EEFLLRASCDLGPMLLDNLIDDISLSVSIGGKEAAENDLLRFRD---ELLQAARRKFTKP 350
Query: 641 EYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 700
EY++CP CGRTLF+L+E+ E++++TSHL G +IA+MGCIVNGPGEMADAD+GYVG
Sbjct: 351 EYIACPGCGRTLFNLEEVFEEVKKRTSHLTGYNIAVMGCIVNGPGEMADADYGYVGAGRD 410
Query: 701 KIDLYVGKTVVKRGIAMEQATDALIQLIKDHGR 733
K+ +Y GKT V + A D L+++I++ R
Sbjct: 411 KVTIYRGKTAVFMNVPQTDAIDKLLEIIEEDRR 443
>gi|228470214|ref|ZP_04055121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
uenonis 60-3]
gi|228308165|gb|EEK17028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
uenonis 60-3]
Length = 596
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 165/276 (59%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR++ +V +G +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 26 SLCRYQRRQSYSVPIGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 85
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + +K+R+NPGNF ++A
Sbjct: 86 AQGVREATNLGVIAEQLRAEGCRMPLVADIHFRSEPAFEALKHVEKVRINPGNFLHQKAS 145
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + R +RIG NHGSLS+RI++ YG++P GM
Sbjct: 146 L------DDETARA--EIAEVFGRFVREAQARHRTIRIGVNHGSLSERILARYGNTPEGM 197
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M YPLHLGVTEAG
Sbjct: 198 VASCMEYLEVCDSLRMRDVVISMKASNVLVMTQAVRLLVERMDALDLHYPLHLGVTEAGA 257
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 258 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 293
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 2/166 (1%)
Query: 575 VIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCR 634
++H+ + G DD++I T +G+LL++G+G+ + A D +LQ R
Sbjct: 433 LLHYASYARGY--DDILIDCATQLGSLLLEGIGNAVAFSAVAMSPKARLDLLNGILQAVR 490
Query: 635 MRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGY 694
++ T TE++SCP CGRTLFDLQ+ A+++++ +HLP + I +MGCIVNGPGEMADAD+GY
Sbjct: 491 IKMTHTEFISCPGCGRTLFDLQQTVAQVKQRLAHLPNLKIGVMGCIVNGPGEMADADYGY 550
Query: 695 VGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
VGG GK+DLY G+ + GI +A D LI+LIK G+W +PP +
Sbjct: 551 VGGGVGKVDLYRGQERLVHGIPSAEAVDHLIELIKSDGKWCDPPQQ 596
>gi|110456071|gb|ABG74579.1| isoprenoid biosynthesis-like protein [Musa acuminata AAA Group]
Length = 120
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/120 (90%), Positives = 116/120 (96%)
Query: 611 LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP 670
LLEA Q+++FLR+TSFNLLQGCRMRNTK EYVSCPSCGRTLFDLQEISA+IREKTSHLP
Sbjct: 1 LLEASDQEYEFLRNTSFNLLQGCRMRNTKAEYVSCPSCGRTLFDLQEISAQIREKTSHLP 60
Query: 671 GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
GVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVVKRGIAME AT+ALIQLIK+
Sbjct: 61 GVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLIKE 120
>gi|209402451|gb|ACI45948.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase precursor [Guillardia theta]
Length = 276
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
G+ VG LVDG GDG+L++AP DFLR +SF LLQGCRMRNTKTEYVSCPSCGRTL
Sbjct: 123 GSIDQVGCSLVDGNGDGVLMQAP-LPLDFLRLSSFGLLQGCRMRNTKTEYVSCPSCGRTL 181
Query: 653 FDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
FDLQ ++ +I + T HLPG +IA+MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK +V+
Sbjct: 182 FDLQTVTDQISKATGHLPGATIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKELVR 241
Query: 713 RGIAMEQATDALIQLIKDHGRWAEPPAEE 741
+ I E+A D LI+LIK++GRW EP E
Sbjct: 242 KAIPSEKACDELIELIKENGRWVEPSKNE 270
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
YC+S++KT RRKTRTV G+V IGSEHPI +QTMTT T D+ G++++V
Sbjct: 80 YCDSVYKTTRRKTRTVQCGDVPIGSEHPIALQTMTTAMTTDIQGSIDQV 128
>gi|20807847|ref|NP_623018.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter tengcongensis MB4]
gi|22095778|sp|Q8RA30.1|ISPG_THETN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|20516410|gb|AAM24622.1| Essential bacterial protein, involved in density-dependent
regulation of peptidoglycan biosynthesis
[Thermoanaerobacter tengcongensis MB4]
Length = 355
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 174/294 (59%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++
Sbjct: 4 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEK 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A + EIK K+ NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 64 AAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VE K+ G +RIG N GSL I++ YG +P +VES
Sbjct: 111 --------------EENIKKVVEAAKERGIPIRIGVNAGSLEKEILNKYGGITPEAVVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ KL F++ + S+K SN + ++AY+L +++ DYPLHLG+TEAG E
Sbjct: 157 ALKSVRLLEKLGFYDIVISLKTSNVPLTIEAYKLASSKV-----DYPLHLGITEAGTLES 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L LG+ L++GV
Sbjct: 212 GTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVRVGRQILRALGL----LKEGV 261
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 190 LASSKVDYPL--HLGITEAGTLESGTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVR-V 246
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT D+ +++ E+ +TSH+ + +A+MGC+VNGP
Sbjct: 247 GRQILRALGLLKEGVEVISCPTCGRTKIDVIKLATEVERRTSHIKKPLKVAVMGCVVNGP 306
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 307 GEAKEADIGIAGG 319
>gi|254479456|ref|ZP_05092783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Carboxydibrachium pacificum DSM 12653]
gi|214034599|gb|EEB75346.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Carboxydibrachium pacificum DSM 12653]
Length = 352
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 174/294 (59%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++
Sbjct: 1 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A + EIK K+ NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VE K+ G +RIG N GSL I++ YG +P +VES
Sbjct: 108 --------------EENIKKVVEAAKERGIPIRIGVNAGSLEKEILNKYGGITPEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ KL F++ + S+K SN + ++AY+L +++ DYPLHLG+TEAG E
Sbjct: 154 ALKSVRLLEKLGFYDIVISLKTSNVPLTIEAYKLASSKV-----DYPLHLGITEAGTLES 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVRVGRQILRALGL----LKEGV 258
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HLGITEAGTLESGTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT D+ +++ E+ +TSH+ + +A+MGC+VNGP
Sbjct: 244 GRQILRALGLLKEGVEVISCPTCGRTKIDVIKLATEVERRTSHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|294506673|ref|YP_003570731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber M8]
gi|294343001|emb|CBH23779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber M8]
Length = 398
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 167/284 (58%), Gaps = 35/284 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGNV IG PI VQTMT + T +V T+EE+ R+AD GAD+VR+ V +
Sbjct: 5 RRSSRPVQVGNVQIGGGAPISVQTMTVSKTHEVETTLEEIERVADAGADIVRVAVPRPED 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I + +P+VADIHF AL+ E K+R+NPGN R
Sbjct: 65 ADALEDI-----VQGAPVPVVADIHFNYQYALKAIEAGIHKVRINPGNIGKR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E+++E+ +E K+ G +RIG N GSL + I+ +G P+ + ESA
Sbjct: 112 ----EWEREV----------LEAAKEAGVPIRIGVNSGSLEEDILDKHGYPKPQALFESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+CR+ DF + + S+K S+P +M+QAYR + E DYPLHLGVTE+G + G
Sbjct: 158 MRHVEVCRRNDFEDIVISVKHSDPYMMIQAYRKVAEET-----DYPLHLGVTESGSLDTG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
+KS+IGIG+LL DG+GDTIRVSL P +E+ R L +LG+
Sbjct: 213 TVKSSIGIGSLLADGIGDTIRVSLAADPVEEVKVGHRILKSLGI 256
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+QA R++ E ++P+ H+ D + + +G+LL DG+GD + +
Sbjct: 185 IQAYRKVAE-----ETDYPL--HLGVTESGSLDTGTVKSSIGIGSLLADGIGDTIRVSLA 237
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR---TLFDLQEISAEIREKTSHLPGV 672
+ ++ +L+ + ++CP+CGR LF + E E + S +
Sbjct: 238 ADPVEEVK-VGHRILKSLGIGRPGVNIIACPTCGRLVGDLFSVVEEVEEAVAEKSFDKNL 296
Query: 673 SIAIMGCIVNGPGEMADADFG 693
+A+MGC VNGPGE AD G
Sbjct: 297 DVALMGCAVNGPGEAEGADLG 317
>gi|192358785|ref|YP_001981968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
japonicus Ueda107]
gi|238054438|sp|B3PDM1.1|ISPG_CELJU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|190684950|gb|ACE82628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
japonicus Ueda107]
Length = 374
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 162/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES VRRK+R +MVGNV +G PI VQ+MT +T DVA TVE++ RI GAD+V
Sbjct: 2 HCES--PIVRRKSRQIMVGNVPVGGGAPISVQSMTNTETTDVAATVEQIRRIQTAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A L++K NIPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 60 RVSVPTMEAAEAF-----GLIRKQVNIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+K + +RIG N GSL + YG+
Sbjct: 115 ----------------------EKRIKAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA I L+F+NF S+KAS+ + V AYR L A + + PLHLG+
Sbjct: 153 TPDALVESALRHVEILDGLNFYNFKVSVKASDIFMAVAAYRKLAALI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSAIG+G LL DG+GDTIRVSL P +EI
Sbjct: 208 TEAGGLRAGTVKSAIGLGALLMDGIGDTIRVSLAADPVEEI 248
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL+DG+GD + + + ++ +++L+ ++R+ +++CPSC R
Sbjct: 218 VKSAIGLGALLMDGIGDTIRVSLAADPVEEIK-VGWDMLRSLKIRSKGVNFIACPSCSRQ 276
Query: 652 LFDLQEI--SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
FD+ + E+R + +P + +A++GC+VNGPGE +AD G GG P + G+
Sbjct: 277 NFDVIKTMNDLELRVEDITVP-LDVAVIGCVVNGPGEAKEADLGLAGGTPSNLIYIDGEP 335
Query: 710 VVKRGIAMEQATDALIQLIK 729
K + E D L +LI+
Sbjct: 336 SQK--LTNENLVDNLERLIR 353
>gi|374296766|ref|YP_005046957.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium clariflavum DSM 19732]
gi|359826260|gb|AEV69033.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium clariflavum DSM 19732]
Length = 354
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 38/291 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V VG +IG + PI VQ+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 8 RKKTRKVCVGGTSIGGDSPITVQSMTNTDTRDAVSTINQIKRLEEAGCDIVRVAVPDIQA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK ++ IPLVADIHF +A+ + DKIR+NPGN DR
Sbjct: 68 AEAIKEIKKAI-----RIPLVADIHFDYRLAIESIKSGADKIRINPGNIGDR-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +VE K+ +RIG N GSL IM+ YG +P MVESA
Sbjct: 115 --------------DRVKAVVEAAKERKIPIRIGVNSGSLEKDIMAKYGGVTPEAMVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A+I LDFH+ + S+KAS+ + + AYR ++ + DYPLH+GVTEAG G
Sbjct: 161 LGHAKILEDLDFHDIVISLKASSVSMTIAAYRRMIEK-----SDYPLHIGVTEAGTVYRG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
+KSA+G+G LL +G+GDTIRVSLT P +EI R N ++A L++G
Sbjct: 216 TIKSAVGLGCLLAEGIGDTIRVSLTGDPIEEI----RAGNEILKALGLKKG 262
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 542 ILHDLPFNEDKIG--------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
IL DL F++ I + A RR+ E ++P+ + ++R I
Sbjct: 166 ILEDLDFHDIVISLKASSVSMTIAAYRRMIE-----KSDYPLHIGVTEAGTVYRG--TIK 218
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
+ +G LL +G+GD + + G + +R +L+ ++ E VSCP+CGR
Sbjct: 219 SAVGLGCLLAEGIGDTIRVSLTGDPIEEIR-AGNEILKALGLKKGGVELVSCPTCGRCQV 277
Query: 654 DLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
DL +I+++I E S + + +A+MGC VNGPGE +AD G GG G++ L+ +++
Sbjct: 278 DLIDIASKIEESLSKVDKDIKVAVMGCAVNGPGEAREADIGIAGG-KGEVLLFKKGEIIR 336
Query: 713 R 713
+
Sbjct: 337 K 337
>gi|83815534|ref|YP_444820.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber DSM 13855]
gi|83756928|gb|ABC45041.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber DSM 13855]
Length = 457
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 167/284 (58%), Gaps = 35/284 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VG+V IG PI VQTMT + T +V T+EE+ R+AD GAD+VR+ V +
Sbjct: 64 RRSSRPVQVGDVQIGGGAPISVQTMTVSKTHEVETTLEEIERVADAGADIVRVAVPRPED 123
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I + +P+VADIHF AL+ E K+R+NPGN R
Sbjct: 124 ADALEDI-----VQGAPVPVVADIHFNYQYALKAIEAGIHKVRINPGNIGKR-------- 170
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E+++E+ +E K+ G +RIG N GSL + I+ +G P+ + ESA
Sbjct: 171 ----EWEREV----------LEAAKEAGVPIRIGVNSGSLEEDILDKHGYPKPQALFESA 216
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+CR+ DF + + S+K S+P +M+QAYR + E DYPLHLGVTE+G + G
Sbjct: 217 MRHVEVCRRNDFEDIVISVKHSDPYMMIQAYRKVAEET-----DYPLHLGVTESGSLDTG 271
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
+KS+IGIG+LL DG+GDTIRVSL P +E+ R L +LG+
Sbjct: 272 TVKSSIGIGSLLADGIGDTIRVSLAADPVEEVKVGHRILKSLGI 315
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+QA R++ E ++P+ H+ D + + +G+LL DG+GD + +
Sbjct: 244 IQAYRKVAE-----ETDYPL--HLGVTESGSLDTGTVKSSIGIGSLLADGIGDTIRVSLA 296
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR---TLFDLQEISAEIREKTSHLPGV 672
+ ++ +L+ + ++CP+CGR LF + E E + S +
Sbjct: 297 ADPVEEVK-VGHRILKSLGIGRPGVNIIACPTCGRLVGDLFSVVEEVEEAVAEKSFDKNL 355
Query: 673 SIAIMGCIVNGPGEMADADFG 693
+A+MGC VNGPGE AD G
Sbjct: 356 DVALMGCAVNGPGEAEGADLG 376
>gi|307243225|ref|ZP_07525396.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus stomatis DSM 17678]
gi|306493353|gb|EFM65335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus stomatis DSM 17678]
Length = 351
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGN+ IG + PI VQ+MTT DT+D T+ ++ R+ + G DLVR+ V +
Sbjct: 5 RRKTRMVRVGNLNIGGDSPISVQSMTTTDTRDAKATISQIHRLEEVGCDLVRVAVV---D 61
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
DA I N ++K NIP+VADIHF +AL V D IR+NPGN
Sbjct: 62 MDAAKNIAN--IKKEINIPIVADIHFDHRLALEAVKSQVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
L +EV S CK +RIG N GSL +++ YG MVESA
Sbjct: 110 --------SLAKTKEVVSA----CKDNNIPIRIGVNGGSLEKDLLNQYGGPVAEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
RI LDFH+ + S+K S+ + ++AYRL+ + DYPLHLG+TEAG + G
Sbjct: 158 MRHVRILEDLDFHDIVISLKNSDVIRSIEAYRLMSKTV-----DYPLHLGITEAGGIKRG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G+LL DG+GDTIR+SLT P +EI
Sbjct: 213 TIKSAIGVGSLLADGIGDTIRISLTGDPTEEI 244
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 525 DESYEELEILKDIDATMILHDLPF---NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQF 581
+ + + IL+D+D HD+ N D I ++A R L +++P+ I
Sbjct: 155 ESAMRHVRILEDLD----FHDIVISLKNSDVIRSIEAYR-----LMSKTVDYPLHLGITE 205
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
GI R I + VG+LL DG+GD + + G + + + +L+ + N K +
Sbjct: 206 AGGIKRG--TIKSAIGVGSLLADGIGDTIRISLTGDPTEEI-PVAKEILRSLDILNDKIK 262
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPG 700
VSCP+CGR +L ++++E+ EK S + +++AIMGC VNGPGE +AD G GG
Sbjct: 263 IVSCPTCGRCNINLIDLASEVEEKISSIDKDITVAIMGCAVNGPGEAREADIGIAGG--D 320
Query: 701 KIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
K+ L K + R I E D L++ I +
Sbjct: 321 KVGLLFKKGEIIRKIPQETIVDTLLEEINN 350
>gi|429728257|ref|ZP_19262989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius VPI 4330]
gi|429150248|gb|EKX93187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius VPI 4330]
Length = 351
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 185/323 (57%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G++ IG ++PI VQ+MTT+DT+D T+++++ + + G D+VRI V
Sbjct: 5 RRKTRVVNIGSIKIGGDNPIAVQSMTTSDTRDPQATIDQILALEEVGCDIVRIAVPDLTA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A IK + NIP+VADIHF +AL E D IR+NPGN D ++
Sbjct: 65 AKAIGTIKAA-----TNIPIVADIHFNYRLALEAVEQGIDAIRINPGNIGD-------ID 112
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
T +V+ CK +RIG N GSL I+ YG + P MVESA
Sbjct: 113 RT---------------KAVVDACKAKNIPIRIGVNGGSLEKSILEKYGHACPEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AYRL+ ++ DYPLHLG+TE+G E G
Sbjct: 158 LGHIKILEDLDFHDIVISLKNSDIRKSVEAYRLMSEKV-----DYPLHLGITESGGVEKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KS+IG+G+LL DG+GDTIR+SLT P +EI ++ L ++G+ +++ P
Sbjct: 213 TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIKVGKQILRSIGLLNDKIKIVSCP--TCG 270
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D + +GQ I+KE E+++
Sbjct: 271 RCNIDLIKFAGQ--IEKEIEDIE 291
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 531 LEILKDIDATMILHDLPF---NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR 587
++IL+D+D HD+ N D V+A R + E +++P+ I G+ +
Sbjct: 161 IKILEDLD----FHDIVISLKNSDIRKSVEAYRLMSE-----KVDYPLHLGITESGGVEK 211
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
I + VG+LLVDG+GD + + G + ++ +L+ + N K + VSCP+
Sbjct: 212 G--TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIK-VGKQILRSIGLLNDKIKIVSCPT 268
Query: 648 CGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
CGR DL + + +I ++ + +++A+MGC VNGPGE +AD G GG
Sbjct: 269 CGRCNIDLIKFAGQIEKEIEDIEKDITVAVMGCAVNGPGEAREADIGVAGG 319
>gi|289423525|ref|ZP_06425326.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius 653-L]
gi|289156027|gb|EFD04691.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius 653-L]
Length = 351
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 185/323 (57%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G++ IG ++PI VQ+MTT+DT+D T+++++ + + G D+VRI V
Sbjct: 5 RRKTRVVNIGSIKIGGDNPIAVQSMTTSDTRDPQATIDQILALEEVGCDIVRIAVPDLTA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A IK + NIP+VADIHF +AL E D IR+NPGN D ++
Sbjct: 65 AKAIGTIKAA-----TNIPIVADIHFNYRLALEAVEQGIDAIRINPGNIGD-------ID 112
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
T +V+ CK +RIG N GSL I+ YG + P MVESA
Sbjct: 113 RT---------------KAVVDACKAKNIPIRIGVNGGSLEKSILEKYGHACPEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AYRL+ ++ DYPLHLG+TE+G E G
Sbjct: 158 LGHIKILEDLDFHDIVISLKNSDIRKSVEAYRLMSEKV-----DYPLHLGITESGGVEKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KS+IG+G+LL DG+GDTIR+SLT P +EI ++ L ++G+ +++ P
Sbjct: 213 TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIKVGKQILRSIGLLNDKIKIVSCP--TCG 270
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D + +GQ I+KE E+++
Sbjct: 271 RCNIDLIKFAGQ--IEKEIEDIE 291
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 531 LEILKDIDATMILHDLPF---NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR 587
++IL+D+D HD+ N D V+A R + E +++P+ I G+ +
Sbjct: 161 IKILEDLD----FHDIVISLKNSDIRKSVEAYRLMSE-----KVDYPLHLGITESGGVEK 211
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
I + VG+LLVDG+GD + + G + ++ +L+ + N K + VSCP+
Sbjct: 212 G--TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIK-VGKQILRSIGLLNDKIKIVSCPT 268
Query: 648 CGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
CGR DL + + +I ++ + +++A+MGC VNGPGE +AD G GG
Sbjct: 269 CGRCNIDLIKFAGQIEKEIEDIEKDITVAVMGCAVNGPGEAREADIGVAGG 319
>gi|385678469|ref|ZP_10052397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
sp. ATCC 39116]
Length = 383
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 177/325 (54%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GSEHPI VQ+MTT T DV T++++ ++ G D+VR+ +
Sbjct: 18 RRKTRQLMVGNVGVGSEHPISVQSMTTTLTADVNATLQQIAQLTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLMKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PV+MV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVIMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGMEVPLR 309
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPEHQIVETLIE 360
>gi|380293391|gb|AFD50343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria varia]
Length = 112
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 107/112 (95%)
Query: 388 QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
QRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDL
Sbjct: 1 QRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDL 60
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
ATVDSIL+RELP DD +ARL LKRL+DISMGVITPLSEQLTKPLP+A+VLV
Sbjct: 61 ATVDSILVRELPPQDDKNARLVLKRLIDISMGVITPLSEQLTKPLPNALVLV 112
>gi|422346362|ref|ZP_16427276.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens WAL-14572]
gi|373225907|gb|EHP48234.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens WAL-14572]
Length = 349
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKAGKEILKNFG 253
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-AGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|18310674|ref|NP_562608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens str. 13]
gi|20138561|sp|P58667.1|ISPG_CLOPE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|18145355|dbj|BAB81398.1| peptidoglycan acetylation protein [Clostridium perfringens str. 13]
Length = 349
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLTKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|269468797|gb|EEZ80401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [uncultured
SUP05 cluster bacterium]
Length = 358
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 157/277 (56%), Gaps = 34/277 (12%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+H RRK+R + VG+VAIG + PI VQ+MT DT DV T+ ++ IAD GADLVR++V
Sbjct: 4 VHSIKRRKSRQIFVGDVAIGGDAPISVQSMTNTDTCDVGATLNQIQSIADAGADLVRVSV 63
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQ 198
A+A EIK K NIPL+ DIHF +AL+VAE D +R+NPGN
Sbjct: 64 PTMEAAEAFKEIK-----KRANIPLITDIHFDYKIALKVAEYGADCLRINPGNIGR---- 114
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRG 257
E+ +V K +G +RIG N GSL + Y + +P
Sbjct: 115 ------------------EDRVREVVASAKDHGIPIRIGVNAGSLEKDLQKKYTEPTPEA 156
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESAF I KL+F NF S+KAS + V AY+ L +++ D PLHLG+TEAG
Sbjct: 157 MVESAFRHIDILDKLNFDNFKISLKASEIFMTVFAYKQLASQI-----DNPLHLGITEAG 211
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IG+G LL +G+GDTIRVSL P E+
Sbjct: 212 SFRAGAVKSSIGLGLLLSEGIGDTIRVSLASDPVDEV 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + D ++ F++L+ +R ++CPSC R
Sbjct: 218 VKSSIGLGLLLSEGIGDTIRVSLASDPVDEVK-VGFDILKSLHLRKKGINLIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKT 709
FD+ + E+ + + + +A++GC+VNGPGE + G GG+P LY+ GKT
Sbjct: 277 KFDVISVVNELESRLEDITDPIDVAVIGCVVNGPGEAKEVSVGLTGGSPNL--LYINGKT 334
>gi|110803791|ref|YP_698979.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens SM101]
gi|110684292|gb|ABG87662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens SM101]
Length = 349
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V +GN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKIGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYKLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|168208109|ref|ZP_02634114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens E str. JGS1987]
gi|170660602|gb|EDT13285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens E str. JGS1987]
Length = 349
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVEAMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+A + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVEAMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|110800593|ref|YP_696379.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens ATCC 13124]
gi|168211420|ref|ZP_02637045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens B str. ATCC 3626]
gi|422874613|ref|ZP_16921098.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens F262]
gi|110675240|gb|ABG84227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens ATCC 13124]
gi|170710596|gb|EDT22778.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens B str. ATCC 3626]
gi|380304254|gb|EIA16543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens F262]
Length = 349
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ ++ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEQRLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|168214475|ref|ZP_02640100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens CPE str. F4969]
gi|168216979|ref|ZP_02642604.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens NCTC 8239]
gi|182627139|ref|ZP_02954854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens D str. JGS1721]
gi|170714038|gb|EDT26220.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens CPE str. F4969]
gi|177907476|gb|EDT70142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens D str. JGS1721]
gi|182380924|gb|EDT78403.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens NCTC 8239]
Length = 349
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|169342689|ref|ZP_02863730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens C str. JGS1495]
gi|169299195|gb|EDS81265.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens C str. JGS1495]
Length = 349
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWIG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D HD+ + K V+ + S+ N+P+ H+
Sbjct: 153 ESALEHVKILEELD----FHDIVISM-KSSNVETMIESYRIASQKT-NYPL--HLGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+GD + + G + ++ +L+ E++S
Sbjct: 205 GTPWIGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIK-VGKEILKNFGYVKEGIEFIS 263
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG +
Sbjct: 264 CPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLI 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
G+ + K + E + LI++I+
Sbjct: 324 FRKGEIIKK--VKEEDLVEELIKIIE 347
>gi|380293387|gb|AFD50341.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria varia]
Length = 111
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 106/111 (95%)
Query: 388 QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
QRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDL
Sbjct: 1 QRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDL 60
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
ATVDSIL+RELP DD +ARL LKRL+DISMGVITPLSEQLTKPLP+A+VL
Sbjct: 61 ATVDSILVRELPPQDDKNARLVLKRLIDISMGVITPLSEQLTKPLPNALVL 111
>gi|345017709|ref|YP_004820062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344033052|gb|AEM78778.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 353
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN +
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGKK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVES 261
E +VE K+ G +RIG N GSL I+S Y G + +VES
Sbjct: 109 ---------------ENIKKVVEIAKERGIPIRIGVNSGSLEKEILSKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRHILRSLGL----LKEGV 258
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
++L+ + E +SCP+CGR DL +++ E+ ++T+++ + +A+MGC+VNGP
Sbjct: 244 GRHILRSLGLLKEGVEIISCPTCGRAKIDLIKLAEEVEKRTTNIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|392375509|ref|YP_003207342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Methylomirabilis oxyfera]
gi|258593202|emb|CBE69541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Candidatus Methylomirabilis oxyfera]
Length = 358
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 167/295 (56%), Gaps = 35/295 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V IG E P+ VQ+MT DT+DV TV+++ + G D+VRI V K
Sbjct: 4 RRKTRQIQVGAVKIGGETPVSVQSMTKTDTRDVRATVDQIWALEVAGCDIVRIGVPEKEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ +EI+ K IPL+ADIHF +AL E D +R+NPGN DR
Sbjct: 64 AEKLWEIR-----KQIRIPLIADIHFDYRLALIALEQGVDGLRLNPGNIGDR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+EE+ E+ +RIG N GSL +++ G +P+GMVESA
Sbjct: 111 ----------SRVEEIVKAATERKIP----IRIGVNAGSLEKDLLARDGGPTPKGMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
RI L++ S+KAS+P++M++AYRLL ++ +YPLHLGVTEAG G
Sbjct: 157 LRHIRILEDLNYPEMKVSLKASDPLMMIEAYRLLAEKI-----EYPLHLGVTEAGTPGVG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP-CRRLANLGMRAAELQQGVAP 376
++SA+GIGTLL +G+GDTIRVSL+ P +EI L +LG+R L P
Sbjct: 212 TIRSAVGIGTLLAEGIGDTIRVSLSADPVEEIKAGVEILKSLGLRRGGLTLVACP 266
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 542 ILHDLPFNEDKIG--------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
IL DL + E K+ ++A R L E + +P+ H+ I
Sbjct: 162 ILEDLNYPEMKVSLKASDPLMMIEAYRLLAE-----KIEYPL--HLGVTEAGTPGVGTIR 214
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
+ +G LL +G+GD + + + ++ +L+ +R V+CPSC R
Sbjct: 215 SAVGIGTLLAEGIGDTIRVSLSADPVEEIK-AGVEILKSLGLRRGGLTLVACPSCARADI 273
Query: 654 DLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
DL ++ E+ + + + + +A+MGC VNGPGE AD G GG I K
Sbjct: 274 DLVPLAQEVERRLAGITKEIHVAVMGCEVNGPGEARGADIGVAGGK--GIGWIFRKGEAA 331
Query: 713 RGIAMEQATDALIQ 726
R + + DAL++
Sbjct: 332 RKVKESEIVDALVE 345
>gi|114566426|ref|YP_753580.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337361|gb|ABI68209.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 351
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 171/294 (58%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R + VG V +G E+P+ VQ+MT+ DT+D+ TV+++ ++ G +LVR+ V +
Sbjct: 1 MRRKSRVIKVGTVPVGGEYPVVVQSMTSTDTRDIERTVKQIKQMEAAGCELVRVAVVDEE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A A IK + NIPL+ADIHF +AL+ E D +R+NPGN +
Sbjct: 61 AAQAISRIKQKI-----NIPLIADIHFDHRLALKSIEAGADGLRINPGNIGE-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ C++ +RIG N GSL RI+ +G S + MV S
Sbjct: 108 --------------EKKLCEVVKACQEKKTPIRIGVNAGSLDKRILDRFGGISAQAMVAS 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E ++ +DFH S+KAS+ ++ V+AYRLL A++ DYPLHLG+TEAG +
Sbjct: 154 ALENVKLLEDMDFHEIKLSLKASSVMLTVEAYRLLAAKV-----DYPLHLGITEAGTKDR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
+KSA+GIG LL +G+GDTIRVSLT P E+ L +LG+R Q+G+
Sbjct: 209 ALIKSALGIGMLLYEGIGDTIRVSLTADPVDEVWAAYEILRSLGLR----QRGI 258
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 542 ILHDLPFNEDKIGRVQAARRLFEY----LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
+L D+ F+E K+ ++A+ + L +++P+ H+ +D +I +
Sbjct: 160 LLEDMDFHEIKLS-LKASSVMLTVEAYRLLAAKVDYPL--HLGITEAGTKDRALIKSALG 216
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + D + ++ +L+ +R E +SCPSCGR DL E
Sbjct: 217 IGMLLYEGIGDTIRVSLTADPVDEVW-AAYEILRSLGLRQRGIELISCPSCGRCEIDLIE 275
Query: 658 ISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
+ E+ K H + +A+MGC+VNGPGE +AD G GG
Sbjct: 276 TAEEVDRKIRHYQQALKVAVMGCVVNGPGEAREADLGIAGG 316
>gi|395786976|gb|AFN70969.1| hydroxymethyl butenyl diphosphate synthase, partial [Picrorhiza
kurrooa]
Length = 120
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 109/120 (90%)
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
MPFKDLATVDSILLRELP VDD DARLALKRL+DISMGVITPLSEQLTKPLP+A+ +V L
Sbjct: 1 MPFKDLATVDSILLRELPPVDDKDARLALKRLIDISMGVITPLSEQLTKPLPNALAMVTL 60
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
+ELS+GA+KLLPEGTRLVVS+RGDE EELEILK DATMILH+LP++E+K RV AARR
Sbjct: 61 KELSSGAHKLLPEGTRLVVSVRGDEPEEELEILKSTDATMILHELPYSEEKTSRVHAARR 120
>gi|256750784|ref|ZP_05491669.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus CCSD1]
gi|256750367|gb|EEU63386.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus CCSD1]
Length = 353
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT DL +++ E+ ++T H+ + +A+MGC+VNGP
Sbjct: 244 GRQILRSLGLLKEGVEIISCPTCGRTKIDLIKLAEEVEKRTRHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGGA 698
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGGV 317
>gi|387129966|ref|YP_006292856.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Methylophaga sp. JAM7]
gi|386271255|gb|AFJ02169.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Methylophaga sp. JAM7]
Length = 375
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 163/279 (58%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E ++ RR++R + VGNVAIG + PI VQ+MT +T DVA TV+++ R+ GADLVR+
Sbjct: 2 EGGYQIKRRQSRKIYVGNVAIGGDAPIAVQSMTNTETTDVAATVKQIERLQQVGADLVRV 61
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V A+A EIK K +PL+ADIHF +ALRVAE D +R+NPGN
Sbjct: 62 SVPSLDAAEAFGEIK-----KQVTLPLIADIHFDYRIALRVAELGVDCLRINPGNIGR-- 114
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +++K + YG +RIG N GSL + YG+ +P
Sbjct: 115 --------------------EDRVRAVIDKARDYGIPIRIGVNAGSLEKELQKKYGEPTP 154
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL++ +F S+KAS+ + V AYR L +++ + PLHLG+TE
Sbjct: 155 EALVESAMRHIDILDKLNYPDFKVSLKASDVFMTVMAYRQLASQI-----EQPLHLGITE 209
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 210 AGGLRSGSVKSAIGLGMLLAEGIGDTIRVSLAADPLEEI 248
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + +R F++L+ R+R+ ++CPSC R
Sbjct: 218 VKSAIGLGMLLAEGIGDTIRVSLAADPLEEIR-VGFDILKSLRIRSKGVNLIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ E+ + + + +A++GC+VNGPGE +A G GG+P
Sbjct: 277 QFDVIATVNELETRLEDIIEPMDVAVIGCVVNGPGEAKEAGVGLAGGSP 325
>gi|167037628|ref|YP_001665206.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040289|ref|YP_001663274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter sp. X514]
gi|300914373|ref|ZP_07131689.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X561]
gi|307724391|ref|YP_003904142.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X513]
gi|320116043|ref|YP_004186202.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854529|gb|ABY92938.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X514]
gi|166856462|gb|ABY94870.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300889308|gb|EFK84454.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X561]
gi|307581452|gb|ADN54851.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X513]
gi|319929134|gb|ADV79819.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 353
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT DL ++ E+ ++T ++ + +A+MGC VNGP
Sbjct: 244 GRQILRSLGLLKEGVEIISCPTCGRTKIDLIRLAEEVEKRTRNIKKPLKVAVMGCAVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|373496660|ref|ZP_09587206.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 12_1B]
gi|404368521|ref|ZP_10973871.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
ulcerans ATCC 49185]
gi|313687816|gb|EFS24651.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
ulcerans ATCC 49185]
gi|371965549|gb|EHO83049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 12_1B]
Length = 356
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 163/289 (56%), Gaps = 35/289 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
+KTR V VGN+ IG E+ I +Q+MT T DV TV ++ R+ + G LVR+T+ A
Sbjct: 2 KKTRAVKVGNIIIGGENNIVIQSMTNTMTSDVEATVAQIKRLEEAGCQLVRMTINNMEAA 61
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K IPL ADIHF +AL E DK+R+NPGN
Sbjct: 62 EAIKEIK-----KKVTIPLAADIHFDYKLALAAMENGIDKLRINPGNIGA---------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+E + +V+K K+ +RIG N GSL I+ YG + MVESA
Sbjct: 107 ------------DENVAKVVQKAKEKNIPIRIGVNSGSLEKEILKKYGSPTADAMVESAM 154
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K DFH+ + S+K+SN +MV+AYR + ++ +YPLHLGVTEAG G
Sbjct: 155 YHIGLLEKNDFHDIIVSLKSSNVKMMVEAYRKISEKV-----NYPLHLGVTEAGTAFQGT 209
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSAIGIG+LL DG+G+TIRVSLTE P +EI + L LG+ A ++
Sbjct: 210 VKSAIGIGSLLVDGIGNTIRVSLTEDPVEEIKVAKEILKVLGLMEAGVE 258
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LL 612
V+A R++ E +N+P+ H+ + + +G+LLVDG+G+ + L
Sbjct: 181 VEAYRKISE-----KVNYPL--HLGVTEAGTAFQGTVKSAIGIGSLLVDGIGNTIRVSLT 233
Query: 613 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-G 671
E P ++ ++ +L+ + E VSCP+CGRT DL ++ ++ ++
Sbjct: 234 EDPVEEIKVAKE----ILKVLGLMEAGVEIVSCPTCGRTEIDLIGLAKKVEKEFEKENRK 289
Query: 672 VSIAIMGCIVNGPGEMADADFGYVGG 697
+ IA+MGC+VNGPGE +AD+G GG
Sbjct: 290 IKIAVMGCVVNGPGEAREADYGVAGG 315
>gi|406575783|ref|ZP_11051474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janibacter
hoylei PVAS-1]
gi|404554825|gb|EKA60336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janibacter
hoylei PVAS-1]
Length = 385
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 165/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VG+V +GSE PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRQTRQIKVGSVGVGSESPISVQSMTTTLTSDVNTTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI ++ IP++ADIHF P + E +RVNPGN +
Sbjct: 78 ADALAEIA-----QHSQIPVIADIHFQPKYVFQAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IANAAKDHGTSIRIGVNAGSLDKRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEAGLFEEHDFHDFKISVKHNDPVTMVRAYELLA-----EAGDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +EI ++ L +LG+R +L+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGQQILQSLGLRPRKLE 276
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 200 RAYELLAEAG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+++ A+
Sbjct: 257 EIK-VGQQILQSLGLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMTVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|359411430|ref|ZP_09203895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. DL-VIII]
gi|357170314|gb|EHI98488.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. DL-VIII]
Length = 349
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 156/274 (56%), Gaps = 38/274 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R V VGN+ +G + PI VQ+MTT TKD+ GT++++ ++ D G D+VR V +
Sbjct: 3 RRKSRKVKVGNIYVGGDAPITVQSMTTTRTKDIEGTLKQIEKLYDAGCDIVRCAVLDMDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA--DRRAQFEQ 201
A++ EI + +IP+VADIHF +ALR E +R+NPGN DR
Sbjct: 63 AESLGEI-----TRRASIPVVADIHFDYKLALRAIENGVSALRINPGNIGSVDR------ 111
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ E C K +RIG N GSL I+ YG + G+VE
Sbjct: 112 ------------------IKAVKEACSKKQIPIRIGVNSGSLEKDILEKYGMPTAEGLVE 153
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDF + + S+K+SN +M++ YRL+ + DYPLHLGVTEAG +
Sbjct: 154 SALRHVKILEDLDFRDIVISIKSSNVQMMIECYRLIAEK-----CDYPLHLGVTEAGTAQ 208
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IGIGTLL +G+GDTIRVSLT P E+
Sbjct: 209 KGTIKSSIGIGTLLSEGIGDTIRVSLTSDPVNEV 242
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 542 ILHDLPFNED----KIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F + K VQ + ++E ++P+ H+ I +
Sbjct: 161 ILEDLDFRDIVISIKSSNVQMMIECYRLIAEK-CDYPL--HLGVTEAGTAQKGTIKSSIG 217
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + + ++ +L+ ++ E++SCP+CGRT +L +
Sbjct: 218 IGTLLSEGIGDTIRVSLTSDPVNEVK-VGIEILKALGLKKKGIEFISCPTCGRTQINLIK 276
Query: 658 ISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADF 692
I+ E+ ++ + + +A+MGCIVNGPGE + D
Sbjct: 277 IAEEVEKRLENCKKDIKVAVMGCIVNGPGEARECDL 312
>gi|297544669|ref|YP_003676971.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842444|gb|ADH60960.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 353
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIRRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKERGVPIRIGVNSGSLEKEILYKYKGITAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKSVLILEKLGFYDIVISLKTPNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT DL +++ E+ ++T H+ + +A+MGC+VNGP
Sbjct: 244 GRQILRSLGLLKEGVEVISCPTCGRTKIDLIKLAQEVEKRTRHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|331005907|ref|ZP_08329255.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [gamma
proteobacterium IMCC1989]
gi|330420263|gb|EGG94581.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [gamma
proteobacterium IMCC1989]
Length = 370
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ I GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISVQSMTNTETTDVVATVGQIQAIQQAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI+ K ++PLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 69 ADAFGEIR-----KQVDVPLVADIHFDYRIALRVADLGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++K K +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EKRILAVIDKAKDLNIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KL+FH+F S+KAS+ + V+AYR L + D PLHLG+TEAG G
Sbjct: 162 MRHVDILDKLNFHDFKVSVKASDVFMAVEAYRQLATRI-----DQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDT+RVSL P +E+
Sbjct: 217 TVKSSVGLGILLMDGIGDTMRVSLAADPVQEV 248
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + ++ ++++L+ ++R+ +++CPSC R
Sbjct: 218 VKSSVGLGILLMDGIGDTMRVSLAADPVQEVK-VAWDMLRSLKLRSKGINFIACPSCSRQ 276
Query: 652 LFDLQEI--SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GK 708
FD+ + E R + +P + +A++GC+VNGPGE +AD G GG P + LY+ GK
Sbjct: 277 NFDVIATMNALETRLEDIVVP-MDVAVIGCVVNGPGEAKEADLGLAGGTPNNL-LYIDGK 334
Query: 709 TVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
K IA E D L + I++ E E
Sbjct: 335 PSQK--IAKETLIDDLERHIREKASQKEKALE 364
>gi|415885530|ref|ZP_11547458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus MGA3]
gi|387591199|gb|EIJ83518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus MGA3]
Length = 370
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGNNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAISEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVQEVKVAREL 252
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GA+L G+G+ L L P Q+ R+ LL+ + + +SCP+C
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVQEVKVARE----LLKAFGLSSNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ E+ E + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEVEEYIEKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRK 330
Query: 708 KTVVKR---GIAMEQATDALIQLIKDH-GRWAEPPAEE 741
+V++ +E+ + QL K++ + AE E+
Sbjct: 331 GQIVRKVPEETMVEELKKEIDQLAKEYFAKQAEQTVEK 368
>gi|289578393|ref|YP_003477020.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter italicus Ab9]
gi|289528106|gb|ADD02458.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter italicus Ab9]
Length = 353
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIRRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKERGVPIRIGVNSGSLEKEILYKYKGITAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKSVLILEKLGFYDVVISLKTPNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ + E +SCP+CGRT DL +++ E+ ++T H+ + +A+MGC+VNGP
Sbjct: 244 GRQILRSLGLLKEGVEVISCPTCGRTKIDLIKLAQEVEKRTRHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|403746137|ref|ZP_10954794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121021|gb|EJY55359.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus hesperidum URH17-3-68]
Length = 361
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG H + +Q+MTT T DV TVEE+ R+ D G +VR+TV +
Sbjct: 4 REETKPVRVGDVVIGGNHQVIIQSMTTTKTADVKATVEEIHRLEDAGCQVVRVTVNTRDA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AAAIKEIK-----RQIHIPLVADIHFDHRLALEAIRNGIDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG +P+GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTPQGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYRL + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIIISMKASDVPMAIEAYRLAAERFH-----YPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+T+RVSL+ P +EI R L
Sbjct: 212 TIKSAAGLGTLLSMGIGNTMRVSLSADPVEEIKVAREL 249
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + + VSCP+CGR
Sbjct: 213 IKSAAGLGTLLSMGIGNTMRVSLSADPVEEIK-VARELLKTFHIVSDAVTIVSCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ EI + ++ + ++++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 DIDLISIANEIEDYVQNIRAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|302525241|ref|ZP_07277583.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. AA4]
gi|302434136|gb|EFL05952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. AA4]
Length = 383
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLMVGSVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDKRLLEKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 MWEASLFAEHDFHDIKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 285 RAQVDVYTLADQVTAGLEGMEIPLR 309
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ ++ T+ L G+ I A+
Sbjct: 257 EVK-VGAQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLADQV---TAGLEGMEIPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|334705276|ref|ZP_08521142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
caviae Ae398]
Length = 376
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 158/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR++V
Sbjct: 14 VRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVRVSVPTME 73
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 74 AAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 120
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +V+ + Y +RIG N GSL + YG+ +P ++ES
Sbjct: 121 --------------EERVRAVVDCARHYNIPIRIGVNGGSLERDLQEKYGEPTPEALLES 166
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF NF S+KAS+ + V AYRLL ++ D PLHLG+TEAG
Sbjct: 167 AMRHVDYLDRLDFQNFKVSVKASDVFLAVGAYRLLAKQI-----DQPLHLGITEAGGFRA 221
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL +G+GDT+R+SL P +E+
Sbjct: 222 GAVKSAIGLGMLLSEGIGDTLRISLAADPVEEV 254
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 224 VKSAIGLGMLLSEGIGDTLRISLAADPVEEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 282
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 283 EFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 341
Query: 711 VKR 713
V R
Sbjct: 342 VDR 344
>gi|300783956|ref|YP_003764247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei U32]
gi|384147200|ref|YP_005530016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|399535841|ref|YP_006548503.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|299793470|gb|ADJ43845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei U32]
gi|340525354|gb|AEK40559.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|398316611|gb|AFO75558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
Length = 389
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 24 RRKTRQLQVGSVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 84 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 128
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 129 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 177
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 178 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 232
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L ++ +L+ P
Sbjct: 233 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLKQRKLEIVSCP--SCG 290
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 291 RAQVDVYTLAEQVTAGLEGMEIPLR 315
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 206 RAYELLAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 262
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ ++ K E VSCPSCGR D+ ++ ++ T+ L G+ I A+
Sbjct: 263 EVK-VGIQILQSLNLKQRKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGMEIPLRVAV 318
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 319 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 353
>gi|381164880|ref|ZP_09874110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora azurea NA-128]
gi|418461556|ref|ZP_13032628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora azurea SZMC 14600]
gi|359738426|gb|EHK87314.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora azurea SZMC 14600]
gi|379256785|gb|EHY90711.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora azurea NA-128]
Length = 383
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNSTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----KKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQSAKDHGTPIRIGVNAGSLDPRLMKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSSPPVEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGLEVPLR 309
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSSPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGHQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGLEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|326389442|ref|ZP_08211009.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus JW 200]
gi|325994447|gb|EGD52872.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus JW 200]
Length = 353
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ ++ L +LG L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGKQILRSLGF----LKEGV 258
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ E +SCP+CGRT DL ++ E+ ++T H+ + +A+MGC+VNGP
Sbjct: 244 GKQILRSLGFLKEGVEIISCPTCGRTKIDLIRLAEEVEKRTRHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|224542116|ref|ZP_03682655.1| hypothetical protein CATMIT_01291 [Catenibacterium mitsuokai DSM
15897]
gi|224524953|gb|EEF94058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Catenibacterium mitsuokai DSM 15897]
Length = 355
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 162/273 (59%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR+V VGN+ IG + + +Q+M TKDV T++++ + G +LVR+ V K
Sbjct: 2 LREETRSVQVGNLTIGGNNHVVIQSMCNTKTKDVEATIKQINALQQAGCELVRVAVFDKE 61
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A A EIK K +IPLVADIHF +AL E DK+R+NPGN
Sbjct: 62 DAYAIKEIK-----KGIHIPLVADIHFDYKLALIAIESGIDKVRINPGNIGS-------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
IE+V +V+ CKK +RIG N GSL I+ YG+ +P GMVES
Sbjct: 109 -------------IEKV-KAVVDACKKKHIPIRIGVNGGSLEKDILEKYGEPTPEGMVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I LDFH+ + S+K+SN ++ ++AY E+ + YPLH+GVTEAG
Sbjct: 155 AMKHVKILEDLDFHDIVISLKSSNTMLTIKAY-----ELASKTFPYPLHVGVTEAGTALG 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS++GIGTLL +G+G+TIRVSL++ P +EI
Sbjct: 210 GTIKSSLGIGTLLYEGIGNTIRVSLSDDPVEEI 242
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + + ++IL+D+D HD+ + K + +E S+ FP H+
Sbjct: 153 ESAMKHVKILEDLD----FHDIVISL-KSSNTMLTIKAYELASKT---FPYPLHVGVTEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G LL +G+G+ + + + ++ L + ++ T VS
Sbjct: 205 GTALGGTIKSSLGIGTLLYEGIGNTIRVSLSDDPVEEIKVAKILLKELGLLKGVPT-LVS 263
Query: 645 CPSCGRTLFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
CP+CGR +DL I+ E+ + K HL +++AIMGC VNGPGE AD G GG +
Sbjct: 264 CPTCGRIQYDLIPIAKEMEDFLKDIHLD-ITVAIMGCAVNGPGEARHADIGIAGGVGEGL 322
Query: 703 DLYVGKTV--VKRGIAMEQATDALIQLIKD 730
+ G+ V VK+ ++ D +++++++
Sbjct: 323 LIKHGEIVKRVKQEDMVQTLKDEILKMVEE 352
>gi|363423275|ref|ZP_09311344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
gi|359732019|gb|EHK81046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
Length = 384
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 174/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGNVGVGSDHPVSVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----PIIAKKSKIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M+ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMAKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 GRAQVDVYSLANEVTAGLEGMEVPLR 310
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 236 GALLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYSL 294
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 295 ANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVIKT- 349
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 350 VPEAQIVETLIE 361
>gi|421495453|ref|ZP_15942736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
media WS]
gi|407185528|gb|EKE59302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
media WS]
Length = 371
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 161/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RR++R +MVGNV +G PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRQSRQIMVGNVPVGGNAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLERDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ D PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFENFKVSVKASDVFLAVGAYRLLAKQI-----DQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL DG+GDTIR+SL P +E+
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLADGIGDTIRISLAADPVEEV 249
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLADGIGDTIRISLAADPVEEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|423083963|ref|ZP_17072491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 002-P50-2011]
gi|423087338|ref|ZP_17075726.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 050-P50-2011]
gi|357543761|gb|EHJ25776.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 002-P50-2011]
gi|357544756|gb|EHJ26743.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 050-P50-2011]
Length = 351
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL E D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATTEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+SN V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSNIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
++IL+D+D I+ L K + +E +S+ +++P+ I +H+
Sbjct: 161 IKILEDLDFHNIVISL-----KSSNIYKTVDAYELISKK-VDYPLHIGITESGSVHKG-- 212
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I + VGALL+ G+GD + + G + + +L+ + N K + +SCP+CGR
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEVI-VGKQILRSLGLLNDKIKVISCPTCGR 271
Query: 651 TLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
DL + E+ EK + +++AIMGC VNGPGE +AD G GG
Sbjct: 272 CNIDLISVVNEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGG 319
>gi|138896040|ref|YP_001126493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196248933|ref|ZP_03147633.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. G11MC16]
gi|166217108|sp|A4IQZ4.1|ISPG_GEOTN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|134267553|gb|ABO67748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus thermodenitrificans NG80-2]
gi|196211809|gb|EDY06568.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. G11MC16]
Length = 374
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 160/285 (56%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG++ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGSLTIGGNNEVIIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R ADA EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 EGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIR+SL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRISLSADPVEEVKVAREI 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +GA+L G+G+ + + + ++ + +L+ + + +SCP+CGR
Sbjct: 216 IKSAVGLGAILSKGIGNTIRISLSADPVEEVK-VAREILKTFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ EI + + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEIEDYIAKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGKI 333
Query: 711 VKRGIAMEQATDAL 724
V++ + EQ + L
Sbjct: 334 VRK-VPEEQMVEEL 346
>gi|311030791|ref|ZP_07708881.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
m3-13]
Length = 368
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGDITIGGSNELFIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ CK+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKACKEKGIPIRIGVNAGSLEKRIIEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLSSNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ E S + + +A++GC VNGPGE +AD G G
Sbjct: 275 EIDLISIANEVEEYISTIKAPIKVAVLGCAVNGPGEAREADIGIAGA 321
>gi|348169323|ref|ZP_08876217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora spinosa NRRL 18395]
Length = 384
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 177/325 (54%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHP+ VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGAVGVGSEHPVSVQSMTTTVTADINSTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEAL----PAIAQKS-KIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLMQKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGTQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EIK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLAEEV---TAGLEGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPEHQIVETLIE 360
>gi|418357102|ref|ZP_12959806.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|356689898|gb|EHI54432.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 371
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIRRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + + AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAIGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAVGLGMLLADGIGDTIRISLAADPVEEI 249
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAVGLGMLLADGIGDTIRISLAADPVEEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFD-LQEISA-EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
FD + ++A E R + P + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIATVNALEARLEDIITP-MDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQ 335
Query: 710 VVKR 713
V R
Sbjct: 336 RVDR 339
>gi|306821540|ref|ZP_07455140.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550434|gb|EFM38425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 348
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 160/284 (56%), Gaps = 34/284 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V G++ +G ++ I +Q+MT T DVA TV +++++ +G +VR++V K
Sbjct: 4 RRKTRAVRCGDIFVGGDNDIVIQSMTNTKTSDVASTVNQILQLEKEGCQMVRVSVPDKDS 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A +IK + +IPLVADIHF +AL E DK+R+NPGN D
Sbjct: 64 AKAISKIKEKI-----HIPLVADIHFDYLLALESIENGIDKLRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+E + K K+Y +RIG N GSL I YG +P+ MVESA
Sbjct: 110 -------------DERVRQVAIKAKQYNVPIRIGVNMGSLEKNIQEKYGRTPKAMVESAM 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF++ + S+KAS M+++Y E + DYPLHLGVTEAG G
Sbjct: 157 YNIRLLEKYDFNDIIVSLKASEIETMIESY-----ESFAQISDYPLHLGVTEAGTLRGGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+GIG LL +G+GDTIRVSLT P +EI + L N+G +
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKMILQNIGYK 255
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL++G+GD + + + + +LQ + VSCP+C RT
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKM-ILQNIGYKFGAV-VVSCPTCART 269
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ ++ ++ E T + + IA+MGCIVNGPGE DAD G GG + GKT+
Sbjct: 270 NIDIINLANKVEEATKDIKKDIKIAVMGCIVNGPGEAKDADIGIAGGKGEALFFAKGKTL 329
Query: 711 VK 712
K
Sbjct: 330 KK 331
>gi|402310869|ref|ZP_10829828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
sp. AS15]
gi|400366798|gb|EJP19822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
sp. AS15]
Length = 348
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 160/284 (56%), Gaps = 34/284 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V G++ +G ++ I +Q+MT T DVA TV +++++ +G +VR++V K
Sbjct: 4 RRKTRAVRCGDIFVGGDNDIVIQSMTNTKTSDVASTVNQILQLEKEGCQMVRVSVPDKDS 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A +IK + +IPLVADIHF +AL E DK+R+NPGN D
Sbjct: 64 AKAISKIKEKI-----HIPLVADIHFDYLLALESIENGIDKLRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+E + K K+Y +RIG N GSL I YG +P+ MVESA
Sbjct: 110 -------------DERVRQVAIKAKQYNVPIRIGVNMGSLEKNIQEKYGRTPKAMVESAM 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF++ + S+KAS M+++Y E + DYPLHLGVTEAG G
Sbjct: 157 YNIRLLEKYDFNDIIVSLKASEIETMIESY-----ESFAQISDYPLHLGVTEAGTLRGGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+GIG LL +G+GDTIRVSLT P +EI + L N+G +
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKMILQNIGYK 255
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL++G+GD + + + + +LQ + VSCP+C RT
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKM-ILQNIGYKFGAV-IVSCPTCART 269
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ ++ ++ E T + + IA+MGCIVNGPGE DAD G GG + GKT+
Sbjct: 270 NIDIINLANKVEEATKDIKKDIKIAVMGCIVNGPGEAKDADIGIAGGKGEALFFAKGKTL 329
Query: 711 VK 712
K
Sbjct: 330 KK 331
>gi|373859052|ref|ZP_09601784.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
sp. 1NLA3E]
gi|372451143|gb|EHP24622.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
sp. 1NLA3E]
Length = 368
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EMIHRT---KTRPIKVGNLTIGGNSELVIQSMTTTKTHDVEATVAEIKRLEEAGCQMVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRR 196
+R A+A EIK K NIPLV DIHF +AL +A DKIR+NPGN R
Sbjct: 60 ACPDERAANAISEIK-----KRINIPLVVDIHFDYKLALIAIAGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVTLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKVFGLSSNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYIQKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|94501125|ref|ZP_01307648.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oceanobacter
sp. RED65]
gi|94426701|gb|EAT11686.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oceanobacter
sp. RED65]
Length = 373
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 160/279 (57%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
+ I RRK+R +MVGNV +G + PI VQ+MT DT DVA TV ++ + D GAD+VR+
Sbjct: 4 QGISPIKRRKSRQIMVGNVPVGGDAPIAVQSMTNTDTCDVAATVAQIKALEDVGADIVRV 63
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V A+A +I+ K N+PLV+DIHF +ALRVAE D +R+NPGN
Sbjct: 64 SVPTMDAAEAFGQIR-----KQVNVPLVSDIHFDYKIALRVAELGVDCLRINPGNIGR-- 116
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +V+ K G +RIG N GSL + YG+ +P
Sbjct: 117 --------------------EDRVRAVVDAAKDKGIPIRIGVNAGSLEKDLQKKYGEPTP 156
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL+F +F S+KAS+ + V AYR + +++ + PLHLG+TE
Sbjct: 157 EALVESAMRHIDILDKLNFPDFKLSLKASDVFMTVAAYRQIASQI-----EQPLHLGITE 211
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KS++G+G LL DG+GDT+RVSL P +EI
Sbjct: 212 AGGLRSGTVKSSVGLGMLLMDGIGDTLRVSLAADPVEEI 250
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD L + + ++ F++L+ ++RN +++CPSC R
Sbjct: 220 VKSSVGLGMLLMDGIGDTLRVSLAADPVEEIK-VGFDILKSLKLRNKGINFIACPSCSRQ 278
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + ++++GC+VNGPGE + D G GG+P + GK
Sbjct: 279 NFDVVKTMNELESRVEDILTPLDVSVIGCVVNGPGEAKETDLGLTGGSPNNLVYENGKPS 338
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
K G E D L +I+ + AE AEE
Sbjct: 339 SKLG--NENLVDELEAMIRR--KVAEKQAEE 365
>gi|145299531|ref|YP_001142372.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142852303|gb|ABO90624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 383
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIRRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + + AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAIGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAVGLGMLLADGIGDTIRISLAADPVEEI 249
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAVGLGMLLADGIGDTIRISLAADPVEEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFD-LQEISA-EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
FD + ++A E R + P + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIATVNALEARLEDIITP-MDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQ 335
Query: 710 VVKR 713
V R
Sbjct: 336 RVDR 339
>gi|452950197|gb|EME55661.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
decaplanina DSM 44594]
Length = 383
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 123 KFDDQVKE-----------IARAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDVKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L ++ +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLKERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGMEVPLR 309
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ ++ K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 257 EVK-VGIQILQSLNLKERKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|15598998|ref|NP_252492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO1]
gi|116051828|ref|YP_789329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218889913|ref|YP_002438777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa LESB58]
gi|254236707|ref|ZP_04930030.1| hypothetical protein PACG_02717 [Pseudomonas aeruginosa C3719]
gi|254242494|ref|ZP_04935816.1| hypothetical protein PA2G_03244 [Pseudomonas aeruginosa 2192]
gi|296387682|ref|ZP_06877157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAb1]
gi|313109221|ref|ZP_07795189.1| putative isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa 39016]
gi|355639720|ref|ZP_09051330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. 2_1_26]
gi|386057202|ref|YP_005973724.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa M18]
gi|386067894|ref|YP_005983198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa NCGM2.S1]
gi|392982470|ref|YP_006481057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa DK2]
gi|416865667|ref|ZP_11915779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 138244]
gi|416875227|ref|ZP_11918571.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 152504]
gi|418585958|ref|ZP_13150004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P1]
gi|418589835|ref|ZP_13153754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P2]
gi|419757099|ref|ZP_14283444.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PADK2_CF510]
gi|420137997|ref|ZP_14645940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CIG1]
gi|421152385|ref|ZP_15611965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 14886]
gi|421158387|ref|ZP_15617646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 25324]
gi|421165946|ref|ZP_15624224.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 700888]
gi|421172945|ref|ZP_15630700.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CI27]
gi|421179027|ref|ZP_15636624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa E2]
gi|421518348|ref|ZP_15965022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO579]
gi|424939330|ref|ZP_18355093.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa NCMG1179]
gi|451985681|ref|ZP_21933894.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas aeruginosa 18A]
gi|20138742|sp|Q9HXJ4.1|ISPG_PSEAE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|122260975|sp|Q02RV7.1|ISPG_PSEAB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226722791|sp|B7UWI8.1|ISPG_PSEA8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|9949976|gb|AAG07190.1|AE004798_13 probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa PAO1]
gi|115587049|gb|ABJ13064.1| putative isoprenoid biosynthetic protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168638|gb|EAZ54149.1| hypothetical protein PACG_02717 [Pseudomonas aeruginosa C3719]
gi|126195872|gb|EAZ59935.1| hypothetical protein PA2G_03244 [Pseudomonas aeruginosa 2192]
gi|218770136|emb|CAW25898.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa LESB58]
gi|310881691|gb|EFQ40285.1| putative isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa 39016]
gi|334834351|gb|EGM13322.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 138244]
gi|334842196|gb|EGM20808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 152504]
gi|346055776|dbj|GAA15659.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa NCMG1179]
gi|347303508|gb|AEO73622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa M18]
gi|348036453|dbj|BAK91813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa NCGM2.S1]
gi|354831768|gb|EHF15775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. 2_1_26]
gi|375043632|gb|EHS36248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P1]
gi|375051371|gb|EHS43840.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P2]
gi|384396854|gb|EIE43272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PADK2_CF510]
gi|392317975|gb|AFM63355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa DK2]
gi|403249262|gb|EJY62775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CIG1]
gi|404347830|gb|EJZ74179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO579]
gi|404525145|gb|EKA35421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 14886]
gi|404536616|gb|EKA46252.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CI27]
gi|404539449|gb|EKA48930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 700888]
gi|404547545|gb|EKA56539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa E2]
gi|404549674|gb|EKA58521.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 25324]
gi|451756730|emb|CCQ86417.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas aeruginosa 18A]
gi|453043517|gb|EME91247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA21_ST175]
Length = 371
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 161/281 (57%), Gaps = 37/281 (13%)
Query: 79 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
SIH +RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+V
Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIV 61
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 62 RVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR 116
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ ++ +RIG N GSL + YG+
Sbjct: 117 ----------------------EDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEP 154
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA KLDF NF S+KAS+ + V AYRLL ++ + PLHLG+
Sbjct: 155 TPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQI-----EQPLHLGI 209
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 210 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 250
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 220 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 278
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P
Sbjct: 279 NFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTP 327
>gi|30022358|ref|NP_833989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 14579]
gi|206971260|ref|ZP_03232211.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1134]
gi|218234695|ref|YP_002369086.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus B4264]
gi|228923030|ref|ZP_04086323.1| hypothetical protein bthur0011_40110 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954562|ref|ZP_04116587.1| hypothetical protein bthur0006_39320 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229047996|ref|ZP_04193572.1| hypothetical protein bcere0027_39710 [Bacillus cereus AH676]
gi|229071781|ref|ZP_04204996.1| hypothetical protein bcere0025_39500 [Bacillus cereus F65185]
gi|229081538|ref|ZP_04214036.1| hypothetical protein bcere0023_41710 [Bacillus cereus Rock4-2]
gi|229111752|ref|ZP_04241300.1| hypothetical protein bcere0018_39970 [Bacillus cereus Rock1-15]
gi|229129556|ref|ZP_04258526.1| hypothetical protein bcere0015_39990 [Bacillus cereus BDRD-Cer4]
gi|229146864|ref|ZP_04275229.1| hypothetical protein bcere0012_40040 [Bacillus cereus BDRD-ST24]
gi|229152479|ref|ZP_04280671.1| hypothetical protein bcere0011_40170 [Bacillus cereus m1550]
gi|229180556|ref|ZP_04307898.1| hypothetical protein bcere0005_39010 [Bacillus cereus 172560W]
gi|229192488|ref|ZP_04319451.1| hypothetical protein bcere0002_41410 [Bacillus cereus ATCC 10876]
gi|296504774|ref|YP_003666474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis BMB171]
gi|365158931|ref|ZP_09355119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
7_6_55CFAA_CT2]
gi|423411922|ref|ZP_17389042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3O-2]
gi|423426414|ref|ZP_17403445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-2]
gi|423432292|ref|ZP_17409296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4O-1]
gi|423437727|ref|ZP_17414708.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X12-1]
gi|423503033|ref|ZP_17479625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HD73]
gi|423582489|ref|ZP_17558600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD014]
gi|423585240|ref|ZP_17561327.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD045]
gi|423634895|ref|ZP_17610548.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD156]
gi|423640639|ref|ZP_17616257.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD166]
gi|423657236|ref|ZP_17632535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD200]
gi|449091242|ref|YP_007423683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|50400988|sp|Q818H8.1|ISPG_BACCR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806867|sp|B7HCQ3.1|ISPG_BACC4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29897915|gb|AAP11190.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus ATCC 14579]
gi|206734032|gb|EDZ51203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1134]
gi|218162652|gb|ACK62644.1| gcpE protein [Bacillus cereus B4264]
gi|228591065|gb|EEK48921.1| hypothetical protein bcere0002_41410 [Bacillus cereus ATCC 10876]
gi|228602980|gb|EEK60459.1| hypothetical protein bcere0005_39010 [Bacillus cereus 172560W]
gi|228631087|gb|EEK87724.1| hypothetical protein bcere0011_40170 [Bacillus cereus m1550]
gi|228636692|gb|EEK93157.1| hypothetical protein bcere0012_40040 [Bacillus cereus BDRD-ST24]
gi|228653873|gb|EEL09741.1| hypothetical protein bcere0015_39990 [Bacillus cereus BDRD-Cer4]
gi|228671746|gb|EEL27042.1| hypothetical protein bcere0018_39970 [Bacillus cereus Rock1-15]
gi|228701743|gb|EEL54231.1| hypothetical protein bcere0023_41710 [Bacillus cereus Rock4-2]
gi|228711376|gb|EEL63336.1| hypothetical protein bcere0025_39500 [Bacillus cereus F65185]
gi|228723453|gb|EEL74822.1| hypothetical protein bcere0027_39710 [Bacillus cereus AH676]
gi|228805219|gb|EEM51813.1| hypothetical protein bthur0006_39320 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228836663|gb|EEM82011.1| hypothetical protein bthur0011_40110 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|296325826|gb|ADH08754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis BMB171]
gi|363626095|gb|EHL77099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
7_6_55CFAA_CT2]
gi|401103990|gb|EJQ11967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3O-2]
gi|401111161|gb|EJQ19060.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-2]
gi|401117048|gb|EJQ24886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4O-1]
gi|401120882|gb|EJQ28678.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X12-1]
gi|401213368|gb|EJR20109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD014]
gi|401233883|gb|EJR40369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD045]
gi|401278881|gb|EJR84811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD156]
gi|401279700|gb|EJR85622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD166]
gi|401289979|gb|EJR95683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD200]
gi|402459254|gb|EJV90991.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HD73]
gi|449024999|gb|AGE80162.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 370
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|392940947|ref|ZP_10306591.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter siderophilus SR4]
gi|392292697|gb|EIW01141.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter siderophilus SR4]
Length = 336
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ ++ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKKLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ ++ L +LG L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGKQILRSLGF----LKEGV 258
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ + +++P+ H+ + I + +G LL G+GD + + G +R
Sbjct: 187 LASSKVDYPL--HVGITEAGTIEAGTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVR-V 243
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGP 684
+L+ E +SCP+CGRT DL ++ E+ ++T H+ + +A+MGC+VNGP
Sbjct: 244 GKQILRSLGFLKEGVEIISCPTCGRTKIDLIRLAEEVEKRTRHIKKPLKVAVMGCVVNGP 303
Query: 685 GEMADADFGYVGG 697
GE +AD G GG
Sbjct: 304 GEAKEADIGIAGG 316
>gi|423650145|ref|ZP_17625715.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD169]
gi|401282563|gb|EJR88462.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD169]
Length = 370
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|228960544|ref|ZP_04122193.1| hypothetical protein bthur0005_40100 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|423631003|ref|ZP_17606750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD154]
gi|228799144|gb|EEM46112.1| hypothetical protein bthur0005_40100 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|401264370|gb|EJR70482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD154]
Length = 370
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|291191893|gb|ADD83000.1| PtnM2 [Streptomyces platensis]
Length = 366
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 162/291 (55%), Gaps = 34/291 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR +M+G V +GS HP+ VQ+MTT T D T++++ + G D+VR+ +
Sbjct: 6 LRRPTRQLMLGGVGVGSRHPVSVQSMTTTVTADAQATLQQIAELTAAGCDIVRVACPSRD 65
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A+A EI + IP++ADIHF P E +RVNPGN
Sbjct: 66 DAEALAEIA-----QKSKIPVIADIHFQPRYVFAAIEAGCAGVRVNPGNI---------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +++ I + K+ G +RIG N GSL RIM +G +P + ES
Sbjct: 111 ----KEFDDKIKEI-------AQAAKEAGTPIRIGVNAGSLDPRIMRKFGKATPEALAES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +P+VM++AY LL A+ DYPLHLGVTEAG
Sbjct: 160 ALREAELFAEHDFHDFKISVKHHDPMVMIRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KS++ G LL+ G+GDTIRVSL+ PP +E+ + L +LG+R L+
Sbjct: 215 GTVKSSVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLGLRPRRLE 265
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +LQ +R + E VSCPSCGR D+ ++
Sbjct: 224 GALLRQGIGDTIRVSLSAPPVEEVK-VGIQILQSLGLRPRRLEIVSCPSCGRAQVDVYKL 282
Query: 659 SAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ E+ LP + +A+MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 283 AEEVSAGLEGLPVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVVK 336
>gi|218899445|ref|YP_002447856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus G9842]
gi|228902802|ref|ZP_04066947.1| hypothetical protein bthur0014_39730 [Bacillus thuringiensis IBL
4222]
gi|228941443|ref|ZP_04103994.1| hypothetical protein bthur0008_40810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967344|ref|ZP_04128379.1| hypothetical protein bthur0004_41470 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974374|ref|ZP_04134943.1| hypothetical protein bthur0003_41280 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980967|ref|ZP_04141270.1| hypothetical protein bthur0002_41300 [Bacillus thuringiensis Bt407]
gi|384188352|ref|YP_005574248.1| 4-hydroxy-3-methylbut-2-en-1-yldiphosphate synthase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|402564256|ref|YP_006606980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-771]
gi|410676669|ref|YP_006929040.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
thuringiensis Bt407]
gi|423358682|ref|ZP_17336185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD022]
gi|423385782|ref|ZP_17363038.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-2]
gi|423527861|ref|ZP_17504306.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB1-1]
gi|434377446|ref|YP_006612090.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-789]
gi|452200744|ref|YP_007480825.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|254806865|sp|B7IYD0.1|ISPG_BACC2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218545235|gb|ACK97629.1| gcpE protein [Bacillus cereus G9842]
gi|228778758|gb|EEM27022.1| hypothetical protein bthur0002_41300 [Bacillus thuringiensis Bt407]
gi|228785424|gb|EEM33434.1| hypothetical protein bthur0003_41280 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792379|gb|EEM39946.1| hypothetical protein bthur0004_41470 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818224|gb|EEM64298.1| hypothetical protein bthur0008_40810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856811|gb|EEN01326.1| hypothetical protein bthur0014_39730 [Bacillus thuringiensis IBL
4222]
gi|326942061|gb|AEA17957.1| 4-hydroxy-3-methylbut-2-en-1-yldiphosphate synthase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401084554|gb|EJP92800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD022]
gi|401635838|gb|EJS53593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-2]
gi|401792908|gb|AFQ18947.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-771]
gi|401876003|gb|AFQ28170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-789]
gi|402451524|gb|EJV83343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB1-1]
gi|409175798|gb|AFV20103.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
thuringiensis Bt407]
gi|452106137|gb|AGG03077.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 370
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|254490118|ref|ZP_05103310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Methylophaga
thiooxidans DMS010]
gi|224464706|gb|EEF80963.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Methylophaga
thiooxydans DMS010]
Length = 374
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + P+ VQ+MT +T DVA TV ++ + + GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPVAVQSMTNTETTDVAATVAQIQALQNVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K +IPLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGQIK-----KQVSIPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+K + YG +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDKARDYGIPIRIGVNAGSLEKELQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L++ +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHIDILDRLNYPDFKVSLKASDVFMTVHAYRKLADQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDTIRVSL P +EI
Sbjct: 217 SVKSSIGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+RN ++CPSC R
Sbjct: 218 VKSSIGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRIRNKGINLIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + + L + +A++GC+VNGPGE +A G GG P
Sbjct: 277 QFDVISTVNALEARLEDILEPMDVAVIGCVVNGPGEAKEAAIGLTGGTP 325
>gi|119505389|ref|ZP_01627463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2080]
gi|119458844|gb|EAW39945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2080]
Length = 375
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNVA+G + PI VQ+MT +T DVA TV +V IAD GAD+VRI+V
Sbjct: 9 RRKSRQIMVGNVAVGGDAPISVQSMTNTETCDVAATVAQVQAIADAGADIVRISVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I+ + +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 ADAFRDIRTQV-----TVPLVADIHFDHKIALKVAEYGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE ++ CK G +RIG N GSL +M Y + + +VESA
Sbjct: 115 -------------EEKVKEVIAACKDRGIPIRIGVNAGSLGKELMRKYPEPTAEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF +F S+KAS + AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRNVDILNRYDFEDFKVSVKASEIFMAQAAYRSLSTQI-----EQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGALLLDGIGDTIRISLAADPVEEV 248
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL+DG+GD + + + ++ F +L+ ++R +++CPSC R
Sbjct: 218 VKSAVGLGALLLDGIGDTIRISLAADPVEEVK-VGFEILKSLKLRANGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
FD+ E+ + + + +A++GCIVNGPGE +AD G G P + G+
Sbjct: 277 NFDVIGTMNELERRLEDIRTPMDVAVIGCIVNGPGEAREADVGLTGATPSNLIYLAGE 334
>gi|423395421|ref|ZP_17372622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-1]
gi|423406296|ref|ZP_17383445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-3]
gi|401654832|gb|EJS72371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-1]
gi|401660290|gb|EJS77772.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-3]
Length = 368
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|228910112|ref|ZP_04073932.1| hypothetical protein bthur0013_42610 [Bacillus thuringiensis IBL
200]
gi|228849629|gb|EEM94463.1| hypothetical protein bthur0013_42610 [Bacillus thuringiensis IBL
200]
Length = 368
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|198283713|ref|YP_002220034.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666696|ref|YP_002426342.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|415974293|ref|ZP_11558748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus sp. GGI-221]
gi|226722778|sp|B7JC30.1|ISPG_ACIF2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226741005|sp|B5EJF3.1|ISPG_ACIF5 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|198248234|gb|ACH83827.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518909|gb|ACK79495.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|339833839|gb|EGQ61649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus sp. GGI-221]
Length = 366
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG VAIG + PI VQ+MT +T+D+A TV ++ R+ GAD+VRI+V
Sbjct: 9 RRKTRQIHVGKVAIGGDAPISVQSMTNTETRDIAATVAQIRRLEAVGADIVRISVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V E D +R+NPGN L+
Sbjct: 69 AEAFKTIRAQV-----ETPLVADIHFDHRIALQVMEDGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDIFLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIRVSL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRVSLAADPVEEI 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 542 ILHDLPFNEDKIGRVQA-----ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
IL +L F++ KI V+A A + LSE +++P+ I G+ + +
Sbjct: 167 ILDELNFHDVKIS-VKASDIFLAVSAYRLLSEK-VDYPLHLGITEAGGLRSG--TVKSAI 222
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD-L 655
+G LL DG+GD + + + +R F++L+ +R ++CPSC R FD +
Sbjct: 223 GLGLLLRDGIGDTIRVSLAADPVEEIR-VGFDILKSLHLRQKGINLIACPSCSRQEFDVI 281
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
I+A L + ++++GC+VNG GE +AD G GG I Y GK V
Sbjct: 282 TTINALEARLEDILEPMDVSVIGCVVNGIGEAKEADIGLAGGDKRSILYYRGKQV 336
>gi|423561251|ref|ZP_17537527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A1]
gi|401201508|gb|EJR08373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A1]
Length = 370
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|117620831|ref|YP_856295.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562238|gb|ABK39186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 371
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL +G+GDT+R+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLSEGIGDTLRISLAADPVEEI 249
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLSEGIGDTLRISLAADPVEEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|254975724|ref|ZP_05272196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-66c26]
gi|255093111|ref|ZP_05322589.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CIP 107932]
gi|255314853|ref|ZP_05356436.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-76w55]
gi|255517527|ref|ZP_05385203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-97b34]
gi|255650638|ref|ZP_05397540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-37x79]
gi|260683728|ref|YP_003215013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CD196]
gi|260687388|ref|YP_003218522.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile R20291]
gi|306520566|ref|ZP_07406913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-32g58]
gi|384361357|ref|YP_006199209.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile BI1]
gi|260209891|emb|CBA63822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CD196]
gi|260213405|emb|CBE05044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile R20291]
Length = 351
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL + + D IR+NPGN R
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIGSR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +VEKCK+ +RIG N GSL ++ +G + +VESA
Sbjct: 112 --------------ERVKMVVEKCKERNLKIRIGVNGGSLEKELLKKHGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
++IL+D+D I+ L ++ + +E +S+ +++P+ I +H+
Sbjct: 161 IKILEDLDFHNIVISLKSSD-----IYKTVDAYELISKK-VDYPLHIGITESGSVHKG-- 212
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I + VGALL+ G+GD + + G + + +L+ + N K + +SCP+CGR
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEVI-VGKQILRSLGLLNDKIKVISCPTCGR 271
Query: 651 TLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
DL + E+ EK + +++AIMGC VNGPGE +AD G GG
Sbjct: 272 CNIDLISVVNEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGG 319
>gi|312110208|ref|YP_003988524.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y4.1MC1]
gi|336234672|ref|YP_004587288.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423719239|ref|ZP_17693421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidans TNO-09.020]
gi|311215309|gb|ADP73913.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y4.1MC1]
gi|335361527|gb|AEH47207.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368142|gb|EID45417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 363
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 164/293 (55%), Gaps = 38/293 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ ++ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNLTIGGNNEVVIQSMTTTKTHDVEATVAQIKQLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVQLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+G G +KSA+GIG +L G+G+TIRVSL+ P +E+ R L + G+ A
Sbjct: 208 SGTLFAGTIKSAVGIGAILSKGIGNTIRVSLSADPVEEVKVAREILKSFGLAA 260
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GA+L G+G+ + L P ++ R+ +L+ + VSCP+C
Sbjct: 216 IKSAVGIGAILSKGIGNTIRVSLSADPVEEVKVARE----ILKSFGLAANAATLVSCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI E + + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEIEEYIAKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRH 330
Query: 708 KTVVKR 713
++++
Sbjct: 331 GKIIRK 336
>gi|126699745|ref|YP_001088642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 630]
gi|115251182|emb|CAJ69013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 630]
Length = 351
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL + + D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIKQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
++IL+D+D I+ L ++ + +E +S+ +++P+ I +H+
Sbjct: 161 IKILEDLDFHNIVISLKSSD-----IYKTVDAYELISKK-VDYPLHIGITESGSVHKG-- 212
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I + VGALL+ G+GD + + G + + +L+ + N K + +SCP+CGR
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEVI-VGKQILRSLGLLNDKIKVISCPTCGR 271
Query: 651 TLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
DL + E+ EK + +++AIMGC VNGPGE +AD G GG
Sbjct: 272 CNIDLISVVNEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGG 319
>gi|152990086|ref|YP_001355808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitratiruptor
sp. SB155-2]
gi|166217117|sp|A6Q1U2.1|ISPG_NITSB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|151421947|dbj|BAF69451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitratiruptor
sp. SB155-2]
Length = 352
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 169/315 (53%), Gaps = 48/315 (15%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + VG+VA+G + PI VQ+MT + T DV TVE++ R+ GAD+VR+ V + +
Sbjct: 3 RYPTKKIFVGDVAVGGDAPISVQSMTFSKTADVEATVEQINRLHFAGADIVRVAVPEEED 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A EIK K ++PLVADIHF +AL AE D IR+NPGN +
Sbjct: 63 AKALKEIK-----KRTSLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSK--------- 108
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ I+EV V+ CK+ +RIG N GSL I + YG + MV+SA
Sbjct: 109 ---------ERIKEV----VKACKERNIPIRIGVNAGSLEKEIEAKYGATSEAMVQSALY 155
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
++ LDF + SMKAS+ V+AYR L + YP HLGVTEAG +
Sbjct: 156 HIKLLEDLDFTDIKVSMKASDVERTVEAYRKLRPLV-----PYPFHLGVTEAGTVFHATI 210
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE--------------- 369
KSAIGIG LL +G+GDTIRVS+T EKEI+ R + RA+E
Sbjct: 211 KSAIGIGALLLEGIGDTIRVSITGELEKEIEVGRAIIKDAGRASEGLNIISCPTCGRIEA 270
Query: 370 -LQQGVAPFEEKHRH 383
L + VA EEK +H
Sbjct: 271 DLVKAVAEVEEKTKH 285
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 542 ILHDLPFNEDKIG-RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
+L DL F + K+ + R E + P H+ I + +GA
Sbjct: 159 LLEDLDFTDIKVSMKASDVERTVEAYRKLRPLVPYPFHLGVTEAGTVFHATIKSAIGIGA 218
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
LL++G+GD + + G+ + + +++ + +SCP+CGR DL + A
Sbjct: 219 LLLEGIGDTIRVSITGE-LEKEIEVGRAIIKDAGRASEGLNIISCPTCGRIEADLVKAVA 277
Query: 661 EIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
E+ EKT H+ +++++MGC+VN GE AD G + + G+ V K
Sbjct: 278 EVEEKTKHIKTPLNVSVMGCVVNAIGEAKHADVAIAYGKGSGLIMVKGEVVAK 330
>gi|228993022|ref|ZP_04152945.1| hypothetical protein bpmyx0001_37590 [Bacillus pseudomycoides DSM
12442]
gi|228999072|ref|ZP_04158654.1| hypothetical protein bmyco0003_36290 [Bacillus mycoides Rock3-17]
gi|229006620|ref|ZP_04164255.1| hypothetical protein bmyco0002_35220 [Bacillus mycoides Rock1-4]
gi|228754669|gb|EEM04079.1| hypothetical protein bmyco0002_35220 [Bacillus mycoides Rock1-4]
gi|228760689|gb|EEM09653.1| hypothetical protein bmyco0003_36290 [Bacillus mycoides Rock3-17]
gi|228766670|gb|EEM15310.1| hypothetical protein bpmyx0001_37590 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L GLG+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGLGNTLRISLSADPVEEVKVAREL 252
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L GLG+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGLGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|421525815|ref|ZP_15972425.1| GcpE protein [Fusobacterium nucleatum ChDC F128]
gi|402258384|gb|EJU08856.1| GcpE protein [Fusobacterium nucleatum ChDC F128]
Length = 354
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVANLKIGGSNPIIIQSMTNTNSTDVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|255101264|ref|ZP_05330241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-63q42]
gi|255307140|ref|ZP_05351311.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile ATCC 43255]
gi|255656106|ref|ZP_05401515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-23m63]
gi|296450463|ref|ZP_06892219.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP08]
gi|296879413|ref|ZP_06903407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP07]
gi|423088618|ref|ZP_17076997.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 70-100-2010]
gi|296260724|gb|EFH07563.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP08]
gi|296429559|gb|EFH15412.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP07]
gi|357559504|gb|EHJ40952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 70-100-2010]
Length = 351
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL E D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
++IL+D+D I+ L ++ + +E +S+ +++P+ I +H+
Sbjct: 161 IKILEDLDFHNIVISLKSSD-----IYKTVDAYELISKK-VDYPLHIGITESGSVHKG-- 212
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I + VGALL+ G+GD + + G + + +L+ + N K + +SCP+CGR
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEVI-VGKQILRSLGLLNDKIKVISCPTCGR 271
Query: 651 TLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
DL + E+ EK + +++AIMGC VNGPGE +AD G GG
Sbjct: 272 CNIDLISVVNEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGG 319
>gi|134102436|ref|YP_001108097.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
gi|291004178|ref|ZP_06562151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
gi|133915059|emb|CAM05172.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
Length = 385
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT +T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLKVGPVGVGSEHPISVQSMTTTNTADINATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ +G +P + ESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLLKKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +EI + L ++ +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGAQILQSMNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGMEVPLR 309
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EIK-VGAQILQSMNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPEHQIVETLIE 360
>gi|335043887|ref|ZP_08536912.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Methylophaga aminisulfidivorans MP]
gi|333787133|gb|EGL53017.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Methylophaga aminisulfidivorans MP]
Length = 376
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNVA+G + P+ VQ+MT +T DVA TV ++ + + GAD+VR++V
Sbjct: 11 RRKSRQIMVGNVAVGGDAPVAVQSMTNTETTDVAATVAQIKALQNVGADIVRVSVPTMDA 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + +IPLVADIHF +ALRVAE D +R+NPGN
Sbjct: 71 AEAFGKIK-----QQVSIPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -------------EERVRAVVDSARDHGIPIRIGVNAGSLEKELQKKYGEPTPDALVESA 163
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L++ +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 164 LRHIDILDRLNYPDFKVSLKASDVFMTVHAYRKLAQQI-----EQPLHLGITEAGGLRSG 218
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 219 SVKSAIGLGMLLSEGIGDTIRVSLAADPVEEI 250
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ ++CPSC R
Sbjct: 220 VKSAIGLGMLLSEGIGDTIRVSLAADPVEEIK-VGFDILKSLRIRSKGINLIACPSCSRQ 278
Query: 652 LFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ + A + + T + +A++GC+VNGPGE +A G GG P LYV
Sbjct: 279 QFDVISTVNALEARLEDITEPM---DVAVIGCVVNGPGEAKEAAIGLTGGTPNL--LYV 332
>gi|411009715|ref|ZP_11386044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
aquariorum AAK1]
Length = 371
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLERDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL +G+GDT+R+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLSEGIGDTLRISLAADPVEEI 249
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLSEGIGDTLRISLAADPVEEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|410663505|ref|YP_006915876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025862|gb|AFU98146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simiduia
agarivorans SA1 = DSM 21679]
Length = 370
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI +Q+MT +T DV TV ++ R+A GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISIQSMTNTETTDVQATVAQIQRLAQAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A L++K +PLVADIHF +ALRVA+ D +R+NPGN +
Sbjct: 69 AEAF-----GLIRKQSPVPLVADIHFDYRIALRVADLGVDCLRINPGNIGREK------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V S K K G +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -----------RIEAVVS----KAKDLGIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ DF +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEFLDRYDFQDFKVSVKASDVFMAVAAYRKLATQI-----EQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVEEV 248
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ +++L+ R+R+ +++CPSC R
Sbjct: 218 VKSSIGLGLLLMDGIGDTIRVSLAADPVEEVK-VGWDMLKSLRLRSKGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + + +A++GC+VNGPGE +AD G GG P + G+
Sbjct: 277 NFDVVKTMNELENRLEDITTPMDVAVIGCVVNGPGEAKEADIGLAGGTPNNLVYIDGEPN 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + + D L QLI+
Sbjct: 337 SK--LKADNLVDELEQLIR 353
>gi|363890064|ref|ZP_09317410.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM5]
gi|361966020|gb|EHL18967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM5]
Length = 348
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVRCGNVKIGGNNPIVIQSMTNTKTSDYTSTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEKNDFYNTVVSLKASDIKTTIQAY-----EKFSKISNYPLHLGVTEAGTARAGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 598 VGALLVDGLGDGL---LLEAPGQDFD----FLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+G LL++G+GD + L P ++ D L++ +N + +SCP+C R
Sbjct: 218 IGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIGYNF---------GVQVISCPTCAR 268
Query: 651 TLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
T D+ ++ + T + + +A+MGC+VNGPGE DAD G GG + GKT
Sbjct: 269 TDIDIINLANNVENATRGIKKDIKVAVMGCVVNGPGEAKDADIGIAGGKGEALFFKDGKT 328
Query: 710 VVK 712
+ K
Sbjct: 329 LKK 331
>gi|312139249|ref|YP_004006585.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ispg
[Rhodococcus equi 103S]
gi|311888588|emb|CBH47900.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Rhodococcus equi 103S]
Length = 387
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGNVGVGSDHPVSVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S + K IP++ADIHF P A C +RVNPGN
Sbjct: 82 ADAL-----SAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 126 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMQKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 175 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 230 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGMEVPLR 313
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + G+LL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 232 IKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRA 290
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 291 QVDVYTLANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 346
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 347 GKVIKT-VPEAQIVETLIE 364
>gi|152986154|ref|YP_001346695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA7]
gi|166217121|sp|A6V0W0.1|ISPG_PSEA7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|150961312|gb|ABR83337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA7]
Length = 371
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 160/281 (56%), Gaps = 37/281 (13%)
Query: 79 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
SIH RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+V
Sbjct: 2 SIHSASPITRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIV 61
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 62 RVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR 116
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ ++ +RIG N GSL + YG+
Sbjct: 117 ----------------------EDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEP 154
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA KLDF NF S+KAS+ + V AYRLL ++ + PLHLG+
Sbjct: 155 TPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQI-----EQPLHLGI 209
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 210 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 250
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 220 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 278
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P
Sbjct: 279 NFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTP 327
>gi|344199657|ref|YP_004783983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus ferrivorans SS3]
gi|343775101|gb|AEM47657.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus ferrivorans SS3]
Length = 366
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VGNVAIG + PI VQ+MT +T+DVA TV ++ R+ GAD+VR+++
Sbjct: 9 RRKTRQIHVGNVAIGGDAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV-AECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V A+ D +R+NPGN L+
Sbjct: 69 AEAFKAIRAQV-----ETPLVADIHFDHRIALQVMADGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ + +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTAEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDIYLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRISLAADPVEEI 248
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 542 ILHDLPFNEDKIG----RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL +L F++ KI + A + LSE +++P+ I G+ + +
Sbjct: 167 ILDELNFHDVKISVKASDIYLAVSAYRLLSEK-VDYPLHLGITEAGGLRSG--TVKSAIG 223
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD-LQ 656
+G LL DG+GD + + + +R F++L+ +R ++CPSC R FD +
Sbjct: 224 LGLLLRDGIGDTIRISLAADPVEEIR-VGFDILKSLHLRQKGINLIACPSCSRQEFDVIT 282
Query: 657 EISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
I+A L + ++++GC+VNG GE +AD G GG I Y GK V
Sbjct: 283 TINALEARLEDILEPMDVSVIGCVVNGIGEAKEADIGLAGGDKRSILYYRGKQV 336
>gi|229086847|ref|ZP_04219009.1| hypothetical protein bcere0022_34240 [Bacillus cereus Rock3-44]
gi|228696491|gb|EEL49314.1| hypothetical protein bcere0022_34240 [Bacillus cereus Rock3-44]
Length = 385
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 21 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 80
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 81 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 133
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 134 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 173
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 174 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASRAFDYPLHLGITESGTLF 228
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 229 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 268
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 232 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 290
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 291 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKV 349
Query: 711 VKR 713
V++
Sbjct: 350 VRK 352
>gi|423518981|ref|ZP_17495462.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-4]
gi|423673929|ref|ZP_17648868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM062]
gi|401160036|gb|EJQ67415.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-4]
gi|401310295|gb|EJS15620.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM062]
Length = 368
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|387929745|ref|ZP_10132422.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus PB1]
gi|387586563|gb|EIJ78887.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus PB1]
Length = 369
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + + +Q+MTT T DV TV E+ R+ D G +VR+
Sbjct: 3 EIIHRT---KTRPIKVGNLTIGGNNELVIQSMTTTKTHDVESTVAEIKRLEDAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+ A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDEIAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVQEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GA+L G+G+ L L P Q+ R+ LL+ + + +SCP+C
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVQEVKVARE----LLKAFGLSSNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ E+ E + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEVEEYIEKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRK 330
Query: 708 KTVVKR 713
+V++
Sbjct: 331 GKIVRK 336
>gi|75762216|ref|ZP_00742109.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490301|gb|EAO53624.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 342
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV--GK 708
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ LY GK
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGE-GLYSVKGK 332
Query: 709 TVVK 712
+ VK
Sbjct: 333 SFVK 336
>gi|261417673|ref|YP_003251355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. Y412MC61]
gi|297529368|ref|YP_003670643.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. C56-T3]
gi|319767521|ref|YP_004133022.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC52]
gi|261374130|gb|ACX76873.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC61]
gi|297252620|gb|ADI26066.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. C56-T3]
gi|317112387|gb|ADU94879.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC52]
Length = 374
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GA+L G+G+ + L P ++ R+ +L+ + + +SCP+C
Sbjct: 216 IKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVARE----ILKTFGLASNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI + + + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEIEDYIAKIQAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRH 330
Query: 708 KTVVKRGIAMEQATDAL 724
+V++ + EQ + L
Sbjct: 331 GKIVRK-VPEEQMVEEL 346
>gi|380293393|gb|AFD50344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria tenuis]
Length = 106
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 102/106 (96%)
Query: 392 GQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVD 451
GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDLATVD
Sbjct: 1 GQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDLATVD 60
Query: 452 SILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMV 497
SIL+RELP DD +ARLALKRL+DISMGVITPLSEQLTKPLP+A+V
Sbjct: 61 SILVRELPPQDDKNARLALKRLIDISMGVITPLSEQLTKPLPNALV 106
>gi|392403404|ref|YP_006440016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Turneriella
parva DSM 21527]
gi|390611358|gb|AFM12510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Turneriella
parva DSM 21527]
Length = 383
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 162/287 (56%), Gaps = 35/287 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTRTVM+ V IGS HP+ VQ+MT T D TVE+++R + G +VR T
Sbjct: 28 KVERRKTRTVMMAGVPIGSGHPVPVQSMTKTKTADWKSTVEQILRYEEAGCQVVRCTAND 87
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFE 200
+ A A +IK +N +IPLVADIHF +AL V DKIR+NPGN ++
Sbjct: 88 EDAAHALKKIK-----ENIHIPLVADIHFQHKLALIAVKSGVDKIRINPGNIGNK----- 137
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMV 259
+ S ++ CK G +RIG N GSL IM G + GMV
Sbjct: 138 -----------------DKVSEVLRACKDNGIPIRIGVNAGSLEKDIMRKVGYPTSDGMV 180
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA IC + +F + + S+K+S+ +M++AYR L A++ DYP HLGVTEAG
Sbjct: 181 ESALRHIEICNEHNFDDVIVSLKSSDVFMMMEAYRKL-AKL----CDYPFHLGVTEAGTS 235
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
G +KS+IGIG LL +G+GDTIRVSLT +E+ R L +LG+
Sbjct: 236 WQGTIKSSIGIGGLLSEGIGDTIRVSLTTDGTEEVKVGREILRSLGL 282
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL +G+GD + + + ++ +L+ + + +SCP+CGR
Sbjct: 240 IKSSIGIGGLLSEGIGDTIRVSLTTDGTEEVK-VGREILRSLGLVSFGVTLISCPTCGRL 298
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
DL I+ E+ E +H+ + +A+MGC+VNGPGE +AD G GA G LYV
Sbjct: 299 EVDLFRIAKEVEEAVAHIKTPLKVAVMGCLVNGPGESKEADIGISAGA-GSAILYV 353
>gi|326333628|ref|ZP_08199865.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Nocardioidaceae bacterium Broad-1]
gi|325948534|gb|EGD40637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Nocardioidaceae bacterium Broad-1]
Length = 384
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GSE PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIKVGSVGVGSESPISVQSMTTTLTSDVNSTLQQIAELTASGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA I K IP++ADIHF P E +RVNPGN +
Sbjct: 79 ADALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAAKDHGTSIRIGVNAGSLDKRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 173 IWEASLFEEHGFHDFKISVKHNDPVVMVRAYELLA-----ESGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ G+LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSSVAFGSLLSKGIGDTIRVSLSAPPVEEV 259
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E+ ++P+ H+ I + G+LL G+GD + + +
Sbjct: 201 RAYELLAESG-DWPL--HLGVTEAGPAFQGTIKSSVAFGSLLSKGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ +R + E VSCPSCGR D+ +++ + T+ L G+ + A+
Sbjct: 258 EVK-VGLQILESLNLRPRRLEIVSCPSCGRAQVDVYKLADAV---TAGLDGLEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 348
>gi|410461825|ref|ZP_11315464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
azotoformans LMG 9581]
gi|409925157|gb|EKN62382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
azotoformans LMG 9581]
Length = 362
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR + VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+ +
Sbjct: 5 THRTKTRPIKVGNLTIGGNNEVVIQSMTTTKTHDVDATVAQINRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+ A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 KAANAIAEIK-----KRINIPLVVDIHFDYRLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGVPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFHN + S+KAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHNIIVSLKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+TIR+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTIRISLSADPVEEVKVAREL 252
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTIRISLSADPVEEVK-VARELLKTFGLAANAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ EI E S + + +A++GC VNGPGE +AD G G
Sbjct: 275 EIDLISIANEIEEYISKIKAPIKVAVLGCAVNGPGEAREADIGIAGA 321
>gi|295396365|ref|ZP_06806531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium mcbrellneri ATCC 49030]
gi|294970805|gb|EFG46714.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium mcbrellneri ATCC 49030]
Length = 381
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ GT++++ + G D+VR+ +
Sbjct: 18 RRKTRQIKVGSVGVGSDYPVSVQSMTTTKTTDINGTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL----PAIAQKS-QIPVIADIHFQPKYVYAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL RIM +G +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDKRIMQKFGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PV+MV+AYR L D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHHDPVIMVEAYRQLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 258
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL +G+GD + + + ++ +LQ ++ K E VSCPSCGR
Sbjct: 228 IKSATAFGALLSEGIGDTIRVSLSAPPVEEVK-VGTQILQSLNLKQRKLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
D+ E++ ++ E K +P + +A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYELADKVTEGLKGLDVP-LRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGE 344
Query: 710 VVK 712
V+K
Sbjct: 345 VIK 347
>gi|212638715|ref|YP_002315235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anoxybacillus
flavithermus WK1]
gi|226722779|sp|B7GH89.1|ISPG_ANOFW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|212560195|gb|ACJ33250.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Anoxybacillus flavithermus WK1]
Length = 364
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDF + + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFQDIIVSLKASDVRLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTVRVSLSADPVEEVKVAREL 252
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTVRVSLSADPVEEVK-VARELLKAFGLAANAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ EI E + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEIEEYIAQIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|433444391|ref|ZP_20409310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Anoxybacillus
flavithermus TNO-09.006]
gi|432001683|gb|ELK22556.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Anoxybacillus
flavithermus TNO-09.006]
Length = 364
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDF + + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFQDIIVSLKASDVRLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTVRVSLSADPVEEVKVAREL 252
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GA+L G+G+ + L P ++ R+ LL+ + +SCP+C
Sbjct: 216 VKSAAGLGAILSKGIGNTVRVSLSADPVEEVKVARE----LLKAFGLAANAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI E + + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEIEEYIAQIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRH 330
Query: 708 KTVVKR 713
+V++
Sbjct: 331 GKIVRK 336
>gi|218288358|ref|ZP_03492648.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius LAA1]
gi|218241331|gb|EED08505.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius LAA1]
Length = 361
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 162/278 (58%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I +LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEELDFDDIVISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + + VSCP+CGR
Sbjct: 213 IKSAAGLGTLLHMGIGNTIRVSLSADPVEEVK-VARELLKVFHIVSDAVTIVSCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I E+ + ++ + ++++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 DIDLISIVNELEDYVQNIRAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|225791081|gb|ACO31285.1| PtmM2 [Streptomyces platensis]
Length = 366
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 164/291 (56%), Gaps = 34/291 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR +M+G V +GS HP+ VQ+MTT T D T++++ + G D+VR+ +
Sbjct: 6 LRRPTRQLMLGGVGVGSRHPVSVQSMTTTVTADAQATLQQIAELTAAGCDIVRVACPSRD 65
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A+A EI QK+ IP++ADIHF P E +RVNPGN
Sbjct: 66 DAEALAEI----AQKS-KIPVIADIHFQPRYVFAAIEAGCAGVRVNPGNI---------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +++ I + K+ G +RIG N GSL RI+ +G +P + ES
Sbjct: 111 ----KEFDDKIKEI-------AQAAKETGTPIRIGVNAGSLDPRILRKFGKATPEALAES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +P+VM++AY LL A+ DYPLHLGVTEAG
Sbjct: 160 ALREAELFAEHDFHDFKISVKHHDPMVMIRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KS++ G LL+ G+GDTIRVSL+ PP +E+ + L +LG+R L+
Sbjct: 215 GTVKSSVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLGLRPRRLE 265
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +LQ +R + E VSCPSCGR D+ ++
Sbjct: 224 GALLRQGIGDTIRVSLSAPPVEEVK-VGIQILQSLGLRPRRLEIVSCPSCGRAQVDVYKL 282
Query: 659 SAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ E+ LP + +A+MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 283 AEEVSAGLEGLPVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVVK 336
>gi|448238745|ref|YP_007402803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. GHH01]
gi|445207587|gb|AGE23052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. GHH01]
Length = 374
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GA+L G+G+ + L P ++ R+ +L+ + + +SCP+C
Sbjct: 216 IKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVARE----ILKTFGLASNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI + + + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEIEDYIAKIQAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRH 330
Query: 708 KTVVKRGIAMEQATDAL 724
+V++ + EQ + L
Sbjct: 331 GKIVRK-VPEEQMVEEL 346
>gi|152976711|ref|YP_001376228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cytotoxicus NVH 391-98]
gi|189045581|sp|A7GSX5.1|ISPG_BACCN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|152025463|gb|ABS23233.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cytotoxicus NVH 391-98]
Length = 368
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|410455470|ref|ZP_11309349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
bataviensis LMG 21833]
gi|409929164|gb|EKN66251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
bataviensis LMG 21833]
Length = 369
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + I +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPIKVGNLTIGGSNEIIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIQILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G ++ G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFSGTVKSAAGLGAIISKGIGNTLRISLSADPVEEVKVAREL 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA++ G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAIISKGIGNTLRISLSADPVEEVK-VARELLKVFGLSSNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + ++++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISTIKAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|423206311|ref|ZP_17192867.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC34]
gi|404621863|gb|EKB18728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC34]
Length = 371
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVEYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLTDGIGDTLRISLAADPVEEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|56421001|ref|YP_148319.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
kaustophilus HTA426]
gi|375009551|ref|YP_004983184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|73621094|sp|Q5KX35.1|ISPG_GEOKA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|56380843|dbj|BAD76751.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus kaustophilus HTA426]
gi|359288400|gb|AEV20084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 374
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GA+L G+G+ + L P ++ R+ +L+ + + +SCP+C
Sbjct: 216 IKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVARE----ILKTFGLASNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI + + + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLIRIANEIEDYIAKIQAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRH 330
Query: 708 KTVVKRGIAMEQATDAL 724
+V++ + EQ + L
Sbjct: 331 GKIVRK-VPEEQMVEEL 346
>gi|340354634|ref|ZP_08677336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Sporosarcina
newyorkensis 2681]
gi|339623157|gb|EGQ27662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Sporosarcina
newyorkensis 2681]
Length = 386
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 162/293 (55%), Gaps = 37/293 (12%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L R+ E IH R TR V VGN+ IG + + +Q+MTT T DV TV E+ R+ +
Sbjct: 7 LKERKAMTEMIH---RANTRPVKVGNLTIGGSNELFIQSMTTTKTHDVEATVAEINRLEE 63
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVN 188
G +VR+ +R A + EIK K NIPLV DIHF +AL + + DKIR+N
Sbjct: 64 AGCQIVRVACPDERAAYSIGEIK-----KRINIPLVVDIHFDYKLALIAIEQGADKIRIN 118
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN R+++ E +V K G +RIG N GSL +I+
Sbjct: 119 PGNIG-RQSKVE---------------------AVVNAAKAKGIPIRIGVNAGSLEKKIL 156
Query: 249 SYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
YG + GMVESA +I LDFH+ + S+KAS+ + ++AY+L A +DY
Sbjct: 157 EKYGYPTAEGMVESALHHIKILEDLDFHDIIVSLKASDVNLAIEAYKLAAA-----AFDY 211
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
PLHLG+TE+G G +KSA G+GTLL G+G+T+RVSL+ P +EI R L
Sbjct: 212 PLHLGITESGTLFAGSIKSAAGLGTLLSAGIGNTMRVSLSADPVQEIKVAREL 264
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LL G+G+ + L P Q+ R+ LL+ + + +SCP+C
Sbjct: 228 IKSAAGLGTLLSAGIGNTMRVSLSADPVQEIKVARE----LLKVFGLSSNAATLISCPTC 283
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV- 706
GR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L++
Sbjct: 284 GRIEIDLISIANEVEEYISTIKAPLKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFMH 342
Query: 707 GKTVVK 712
GKTV K
Sbjct: 343 GKTVRK 348
>gi|423512395|ref|ZP_17488926.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-1]
gi|402449366|gb|EJV81203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-1]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229061974|ref|ZP_04199300.1| hypothetical protein bcere0026_40470 [Bacillus cereus AH603]
gi|228717283|gb|EEL68956.1| hypothetical protein bcere0026_40470 [Bacillus cereus AH603]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229135105|ref|ZP_04263907.1| hypothetical protein bcere0014_40080 [Bacillus cereus BDRD-ST196]
gi|229169028|ref|ZP_04296744.1| hypothetical protein bcere0007_39800 [Bacillus cereus AH621]
gi|423470497|ref|ZP_17447241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-2]
gi|423558136|ref|ZP_17534438.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MC67]
gi|423591723|ref|ZP_17567754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD048]
gi|423598402|ref|ZP_17574402.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD078]
gi|423669865|ref|ZP_17644894.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM034]
gi|228614437|gb|EEK71546.1| hypothetical protein bcere0007_39800 [Bacillus cereus AH621]
gi|228648334|gb|EEL04367.1| hypothetical protein bcere0014_40080 [Bacillus cereus BDRD-ST196]
gi|401191404|gb|EJQ98426.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MC67]
gi|401231856|gb|EJR38358.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD048]
gi|401236672|gb|EJR43129.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD078]
gi|401298992|gb|EJS04592.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM034]
gi|402436163|gb|EJV68195.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-2]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|30264350|ref|NP_846727.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Ames]
gi|47529797|ref|YP_021146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47567840|ref|ZP_00238548.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus G9241]
gi|50400990|sp|Q81LV7.1|ISPG_BACAN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|30259008|gb|AAP28213.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Bacillus
anthracis str. Ames]
gi|47504945|gb|AAT33621.1| gcpE protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47555517|gb|EAL13860.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus G9241]
Length = 367
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 249
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 213 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|423612492|ref|ZP_17588353.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD107]
gi|401246081|gb|EJR52433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD107]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|196041627|ref|ZP_03108919.1| gcpE protein [Bacillus cereus NVH0597-99]
gi|229093348|ref|ZP_04224456.1| hypothetical protein bcere0021_40740 [Bacillus cereus Rock3-42]
gi|229157892|ref|ZP_04285966.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 4342]
gi|423549977|ref|ZP_17526304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ISP3191]
gi|196027615|gb|EDX66230.1| gcpE protein [Bacillus cereus NVH0597-99]
gi|228625551|gb|EEK82304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 4342]
gi|228690034|gb|EEL43834.1| hypothetical protein bcere0021_40740 [Bacillus cereus Rock3-42]
gi|401189593|gb|EJQ96643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ISP3191]
Length = 368
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229098751|ref|ZP_04229689.1| hypothetical protein bcere0020_39770 [Bacillus cereus Rock3-29]
gi|407706806|ref|YP_006830391.1| hypothetical protein MC28_3570 [Bacillus thuringiensis MC28]
gi|423440970|ref|ZP_17417876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X2-1]
gi|423448862|ref|ZP_17425741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5O-1]
gi|423464035|ref|ZP_17440803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-1]
gi|423533398|ref|ZP_17509816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB2-9]
gi|423541347|ref|ZP_17517738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB4-10]
gi|423615378|ref|ZP_17591212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD115]
gi|228684595|gb|EEL38535.1| hypothetical protein bcere0020_39770 [Bacillus cereus Rock3-29]
gi|401129456|gb|EJQ37139.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5O-1]
gi|401172535|gb|EJQ79756.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB4-10]
gi|401261057|gb|EJR67224.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD115]
gi|402417631|gb|EJV49931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X2-1]
gi|402420302|gb|EJV52573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-1]
gi|402463617|gb|EJV95317.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB2-9]
gi|407384491|gb|AFU14992.1| gcpE protein [Bacillus thuringiensis MC28]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|206978021|ref|ZP_03238907.1| gcpE protein [Bacillus cereus H3081.97]
gi|217961769|ref|YP_002340339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH187]
gi|229141015|ref|ZP_04269558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BDRD-ST26]
gi|384182100|ref|YP_005567862.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|402555585|ref|YP_006596856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus FRI-35]
gi|423373842|ref|ZP_17351181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AND1407]
gi|423570521|ref|ZP_17546766.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A12]
gi|423574039|ref|ZP_17550158.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-D12]
gi|423604069|ref|ZP_17579962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD102]
gi|226722781|sp|B7HPH8.1|ISPG_BACC7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|206743821|gb|EDZ55242.1| gcpE protein [Bacillus cereus H3081.97]
gi|217065837|gb|ACJ80087.1| gcpE protein [Bacillus cereus AH187]
gi|228642448|gb|EEK98736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BDRD-ST26]
gi|324328184|gb|ADY23444.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|401095243|gb|EJQ03303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AND1407]
gi|401203717|gb|EJR10552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A12]
gi|401212608|gb|EJR19351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-D12]
gi|401245755|gb|EJR52108.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD102]
gi|401796795|gb|AFQ10654.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus FRI-35]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|384134689|ref|YP_005517403.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339288774|gb|AEJ42884.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 361
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 161/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIIISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + + VSCP+CGR
Sbjct: 213 IKSAAGLGTLLHMGIGNTIRVSLSADPVEEVK-VARELLKVFHIVSDAVTIVSCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I E+ + ++ + ++++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 DIDLISIVNELEDYVQNIRAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|229104909|ref|ZP_04235566.1| hypothetical protein bcere0019_40470 [Bacillus cereus Rock3-28]
gi|228678483|gb|EEL32703.1| hypothetical protein bcere0019_40470 [Bacillus cereus Rock3-28]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|49187177|ref|YP_030429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Sterne]
gi|49481588|ref|YP_038337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|65321654|ref|ZP_00394613.1| COG0821: Enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Bacillus anthracis str. A2012]
gi|118479451|ref|YP_896602.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis str. Al Hakam]
gi|165872042|ref|ZP_02216682.1| gcpE protein [Bacillus anthracis str. A0488]
gi|167634574|ref|ZP_02392894.1| gcpE protein [Bacillus anthracis str. A0442]
gi|167638524|ref|ZP_02396800.1| gcpE protein [Bacillus anthracis str. A0193]
gi|170687462|ref|ZP_02878679.1| gcpE protein [Bacillus anthracis str. A0465]
gi|170707407|ref|ZP_02897861.1| gcpE protein [Bacillus anthracis str. A0389]
gi|177655049|ref|ZP_02936715.1| gcpE protein [Bacillus anthracis str. A0174]
gi|190566052|ref|ZP_03018971.1| gcpE protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034828|ref|ZP_03102235.1| gcpE protein [Bacillus cereus W]
gi|218905415|ref|YP_002453249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH820]
gi|225866260|ref|YP_002751638.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 03BB102]
gi|227817054|ref|YP_002817063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CDC 684]
gi|228916911|ref|ZP_04080473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228929322|ref|ZP_04092347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935598|ref|ZP_04098413.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228947992|ref|ZP_04110278.1| hypothetical protein bthur0007_41190 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987528|ref|ZP_04147647.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123817|ref|ZP_04253011.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 95/8201]
gi|229186519|ref|ZP_04313681.1| hypothetical protein bcere0004_40630 [Bacillus cereus BGSC 6E1]
gi|229604914|ref|YP_002868568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A0248]
gi|254684037|ref|ZP_05147897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CNEVA-9066]
gi|254721871|ref|ZP_05183660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A1055]
gi|254736386|ref|ZP_05194092.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Western North America USA6153]
gi|254741423|ref|ZP_05199110.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Kruger B]
gi|254753940|ref|ZP_05205975.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Vollum]
gi|254757812|ref|ZP_05209839.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Australia 94]
gi|376268176|ref|YP_005120888.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus F837/76]
gi|386738168|ref|YP_006211349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. H9401]
gi|421506534|ref|ZP_15953457.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. UR-1]
gi|421638357|ref|ZP_16078953.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. BF1]
gi|73621079|sp|Q6HDN9.1|ISPG_BACHK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166216866|sp|A0RIQ2.1|ISPG_BACAH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226722780|sp|B7JN03.1|ISPG_BACC0 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806863|sp|C3P8I5.1|ISPG_BACAA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806864|sp|C3LKV7.1|ISPG_BACAC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806866|sp|C1ES01.1|ISPG_BACC3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|49181104|gb|AAT56480.1| gcpE protein [Bacillus anthracis str. Sterne]
gi|49333144|gb|AAT63790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118418676|gb|ABK87095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis str. Al Hakam]
gi|164712173|gb|EDR17710.1| gcpE protein [Bacillus anthracis str. A0488]
gi|167513372|gb|EDR88742.1| gcpE protein [Bacillus anthracis str. A0193]
gi|167530026|gb|EDR92761.1| gcpE protein [Bacillus anthracis str. A0442]
gi|170127651|gb|EDS96524.1| gcpE protein [Bacillus anthracis str. A0389]
gi|170668657|gb|EDT19403.1| gcpE protein [Bacillus anthracis str. A0465]
gi|172080310|gb|EDT65399.1| gcpE protein [Bacillus anthracis str. A0174]
gi|190562971|gb|EDV16937.1| gcpE protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195992367|gb|EDX56328.1| gcpE protein [Bacillus cereus W]
gi|218535321|gb|ACK87719.1| gcpE protein [Bacillus cereus AH820]
gi|225787003|gb|ACO27220.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 03BB102]
gi|227007253|gb|ACP16996.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CDC 684]
gi|228596950|gb|EEK54608.1| hypothetical protein bcere0004_40630 [Bacillus cereus BGSC 6E1]
gi|228659638|gb|EEL15284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 95/8201]
gi|228772260|gb|EEM20707.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811682|gb|EEM58017.1| hypothetical protein bthur0007_41190 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824038|gb|EEM69855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830336|gb|EEM75948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228842735|gb|EEM87821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229269322|gb|ACQ50959.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A0248]
gi|364513976|gb|AEW57375.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus F837/76]
gi|384388020|gb|AFH85681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. H9401]
gi|401823527|gb|EJT22674.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. UR-1]
gi|403394783|gb|EJY92023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. BF1]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|423521860|ref|ZP_17498333.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA4-10]
gi|401176522|gb|EJQ83717.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA4-10]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|423368332|ref|ZP_17345764.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD142]
gi|423452416|ref|ZP_17429269.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X1-1]
gi|423660874|ref|ZP_17636043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM022]
gi|401080931|gb|EJP89212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD142]
gi|401140054|gb|EJQ47611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X1-1]
gi|401300915|gb|EJS06504.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM022]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|42783404|ref|NP_980651.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 10987]
gi|222097723|ref|YP_002531780.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus Q1]
gi|375286285|ref|YP_005106724.1| gcpE protein [Bacillus cereus NC7401]
gi|50400906|sp|Q730Q8.1|ISPG_BACC1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806868|sp|B9IY45.1|ISPG_BACCQ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|42739333|gb|AAS43259.1| gcpE protein [Bacillus cereus ATCC 10987]
gi|221241781|gb|ACM14491.1| gcpE protein [Bacillus cereus Q1]
gi|358354812|dbj|BAL19984.1| gcpE protein [Bacillus cereus NC7401]
Length = 367
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 249
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 213 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|163942037|ref|YP_001646921.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
weihenstephanensis KBAB4]
gi|229485805|sp|A9VH61.1|ISPG_BACWK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|163864234|gb|ABY45293.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
weihenstephanensis KBAB4]
Length = 365
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 249
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 213 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|423389402|ref|ZP_17366628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-3]
gi|423417794|ref|ZP_17394883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-1]
gi|401106965|gb|EJQ14922.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-1]
gi|401641493|gb|EJS59210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-3]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229019503|ref|ZP_04176320.1| hypothetical protein bcere0030_40060 [Bacillus cereus AH1273]
gi|229025745|ref|ZP_04182146.1| hypothetical protein bcere0029_40360 [Bacillus cereus AH1272]
gi|229031927|ref|ZP_04187914.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1271]
gi|423400872|ref|ZP_17378045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-2]
gi|423457470|ref|ZP_17434267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X2-1]
gi|228729391|gb|EEL80381.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1271]
gi|228735545|gb|EEL86139.1| hypothetical protein bcere0029_40360 [Bacillus cereus AH1272]
gi|228741759|gb|EEL91942.1| hypothetical protein bcere0030_40060 [Bacillus cereus AH1273]
gi|401147854|gb|EJQ55347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X2-1]
gi|401653862|gb|EJS71405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-2]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229174952|ref|ZP_04302472.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MM3]
gi|228608620|gb|EEK65922.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MM3]
Length = 374
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|423483864|ref|ZP_17460554.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-2]
gi|401141415|gb|EJQ48970.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-2]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|119717426|ref|YP_924391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardioides
sp. JS614]
gi|119538087|gb|ABL82704.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardioides
sp. JS614]
Length = 387
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 175/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS++P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 23 RRKTRQIRVGKVGVGSDYPVSVQSMTTTQTSDVNSTLQQIAELTATGCDIVRVACPSQDD 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ QK+ IP++ADIHF P A C +RVNPGN +
Sbjct: 83 ADAL----PAIAQKS-QIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 126
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 127 RKFDDQVKE-----------IARAAKDRGTSIRIGVNAGSLDKRLLEKYGKATPEALVES 175
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG
Sbjct: 176 AVWEASLFEEHDFHDFKISVKHNDPVVMVRAY-----EMLAERGDWPLHLGVTEAGPAFQ 230
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 231 GTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCP--SC 288
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 289 GRAQVDVYTLAEQVTAGLEGLEVPLR 314
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 205 RAYEMLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSQGIGDTIRVSLSAPPVE 261
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 262 EVK-VGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGLEVPLRVAV 317
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 318 MGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIK 352
>gi|394987685|ref|ZP_10380524.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Sulfuricella
denitrificans skB26]
gi|393792904|dbj|GAB70163.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Sulfuricella
denitrificans skB26]
Length = 363
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+VA+G + PI VQTMT +T DV T+ ++ R A G D+VR++V
Sbjct: 8 RRKSRKIMVGSVAVGGDAPISVQTMTNTETCDVEATLAQIDRAARAGVDIVRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +PL+ DIHF +ALRVAE D +R+NPGN
Sbjct: 68 AEAFGEIK-----KRSQVPLITDIHFDYKIALRVAELGADCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ K +G ++RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRVQAVVQSAKDHGISIRIGVNAGSLEKDLQKKYGEPTPEALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+F +F S+KAS+ V+AY++L A++ + PLHLG+TEAG G
Sbjct: 161 MRHIEILDRLNFPDFKVSLKASDVFTTVEAYKILAAQI-----EQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL G+GDTIRVSL P +E+
Sbjct: 216 SVKSAIGLGMLLAAGIGDTIRVSLAADPVEEV 247
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL G+GD + + + ++ F++L+ +R+ ++CPSC R
Sbjct: 217 VKSAIGLGMLLAAGIGDTIRVSLAADPVEEVK-VGFDILKSLHIRSKGINIIACPSCSRQ 275
Query: 652 LFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + A + + H+ +A+MGC+VNGPGE +A+FG GG+P
Sbjct: 276 EFDVIKTVNALEARLEDVLEHM---DVAVMGCVVNGPGEAREANFGIAGGSP 324
>gi|196046334|ref|ZP_03113560.1| gcpE protein [Bacillus cereus 03BB108]
gi|196022804|gb|EDX61485.1| gcpE protein [Bacillus cereus 03BB108]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|409385673|ref|ZP_11238232.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lactococcus raffinolactis 4877]
gi|399206964|emb|CCK19147.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lactococcus raffinolactis 4877]
Length = 378
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 163/286 (56%), Gaps = 42/286 (14%)
Query: 83 TVRRKTRTVMVGN----VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
T RRKTR V VG+ V IG + + +Q+M T T+DVA TVE++ ++ + G LVR+
Sbjct: 4 THRRKTRAVKVGDGPNAVIIGGRNKVILQSMCTTKTQDVAATVEQINQLEEAGCQLVRVA 63
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA--DR 195
V A A EIK + NIPLVADIHF +AL+ E DKIR+NPGN DR
Sbjct: 64 VPDMEAAIAIKEIKAQI-----NIPLVADIHFDYRLALQAIESGVDKIRINPGNIGRKDR 118
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DS 254
A+ +VE CK + +RIG N GSL + + YG +
Sbjct: 119 VAK------------------------VVEACKAHNIPIRIGVNAGSLEKKFLQKYGYPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
+GM+ESA E I +LDFH+ + SMKASN + ++AY+L AE + DYPLHLG+T
Sbjct: 155 AQGMLESAIEHVEILEELDFHDIIISMKASNVELALEAYKL-AAERF----DYPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
EAG G +KSA G+G LL G+GDT+R+SL+ P +EI R +
Sbjct: 210 EAGPLFSGSVKSAAGMGALLSLGIGDTMRISLSADPREEIKVGREV 255
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E +EIL+++D HD+ + K V+ A ++ +E ++P+ I
Sbjct: 160 ESAIEHVEILEELD----FHDIIISM-KASNVELALEAYKLAAER-FDYPLHLGITEAGP 213
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDT--SFNLLQGCRMRNTK 639
+ + AG +GALL G+GD + L P ++ R+ SF L+ +
Sbjct: 214 LFSGSVKSAAG--MGALLSLGIGDTMRISLSADPREEIKVGREVIKSFGLI------DNA 265
Query: 640 TEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGA 698
VSCP+CGR DL I+ E+ E +++ +++AI+GC VNGPGE +AD G GGA
Sbjct: 266 ATLVSCPTCGRIEIDLIPIAQELEEYIANIKAPITVAILGCGVNGPGEAREADIGLAGGA 325
Query: 699 PGKIDLYVGKTVVK 712
GK L+ ++K
Sbjct: 326 -GKGMLFKKGKIIK 338
>gi|325001857|ref|ZP_08122969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia sp. P1]
Length = 385
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 165/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL----PAIAQKS-QIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ KE+ H + +G +RIG N GSL R+M +G +P + ESA
Sbjct: 123 KFDDQV-KEIAH----------AARDHGTPIRIGVNAGSLDKRLMEKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+ G LL+ G+GDTIRVSL+ PP +EI ++ L +L +R +L+
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGQQILESLNLRPRKLE 276
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYELLAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ +R K E VSCPSCGR D+ ++ E+ T+ L G+ + A+
Sbjct: 257 EIK-VGQQILESLNLRPRKLEIVSCPSCGRAQVDVYTLADEV---TAGLTGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|229198405|ref|ZP_04325111.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus m1293]
gi|228585105|gb|EEK43217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus m1293]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|52141219|ref|YP_085608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus E33L]
gi|73621076|sp|Q634Q9.1|ISPG_BACCZ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|51974688|gb|AAU16238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus cereus E33L]
Length = 378
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|383809973|ref|ZP_09965485.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia aeria
F0474]
gi|383447293|gb|EID50278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia aeria
F0474]
Length = 389
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 169/310 (54%), Gaps = 39/310 (12%)
Query: 64 SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEE 123
S G P+L P + RRKTR VG V IGSE P+ VQ+MTT T D+ T+++
Sbjct: 4 SLGMPVLKPAPQVLAP-----RRKTRQFKVGTVGIGSESPVSVQSMTTTKTHDIGSTLQQ 58
Query: 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECF 182
+ + G D+VR+ ++A+A ++ K NIP++ADIHF P V +
Sbjct: 59 IAELTAAGCDIVRVACPTDKDAEAL-----PIIAKQSNIPVIADIHFQPKYVYAAIKAGC 113
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
+RVNPGN + DD+ ++ + E +G ++RIG N GS
Sbjct: 114 GAVRVNPGN----------IRKFDDQVKE-----------IAEMASDHGTSIRIGVNAGS 152
Query: 243 LSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
L R++ YG +P +VESA A + + F +F S+K ++PV+MV+AYR L A
Sbjct: 153 LDKRLLEKYGKATPEALVESAVWEASLFEEHGFRDFKISVKHNDPVIMVEAYRQLAAS-- 210
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRL 360
D+PLHLGVTEAG G +KS++ GTLL G+GDTIRVSL+ PP +E+ + L
Sbjct: 211 ---GDWPLHLGVTEAGPAFQGTIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVKVGTKIL 267
Query: 361 ANLGMRAAEL 370
+L +R +L
Sbjct: 268 ESLNLRERKL 277
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
G LL G+GD + + + ++ +L+ +R K + VSCPSCGR ++ E+
Sbjct: 237 GTLLSQGIGDTIRVSLSAPPVEEVK-VGTKILESLNLRERKLDIVSCPSCGRAQVNVWEL 295
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ + T L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 296 AENV---TKGLEGMKVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT- 350
Query: 715 IAMEQATDALIQ 726
+ +Q + LI+
Sbjct: 351 VPEDQIVETLIE 362
>gi|229163223|ref|ZP_04291178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus R309803]
gi|228620286|gb|EEK77157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus R309803]
Length = 376
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|393200305|ref|YP_006462147.1| hypothetical protein SSIL_1578 [Solibacillus silvestris StLB046]
gi|406668045|ref|ZP_11075793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
isronensis B3W22]
gi|327439636|dbj|BAK16001.1| enzyme [Solibacillus silvestris StLB046]
gi|405384156|gb|EKB43607.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
isronensis B3W22]
Length = 369
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E +H+T KTR V VGN+ IG + + +Q+M T T DV TV E+ R+ + G +VRI
Sbjct: 3 EIVHRT---KTRPVRVGNLTIGGNNEVVIQSMCTTKTHDVEATVAEIKRLEEAGCQIVRI 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
V +R A+A EIK K NIPLVADIHF +AL+ E DK+R+NPGN R
Sbjct: 60 AVPDERAANAIPEIK-----KQINIPLVADIHFDYKLALKAIEGGIDKVRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V K G +RIG N GSL I+ YG +
Sbjct: 114 ---------------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFNYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ N+P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKAAQA-FNYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEIK-VARELLKSFGLASNMATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKLNVPLKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L++ GKTV K
Sbjct: 327 LFMKGKTVRK 336
>gi|423478423|ref|ZP_17455138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-1]
gi|402428585|gb|EJV60682.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-1]
Length = 376
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|301055772|ref|YP_003793983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus biovar anthracis str. CI]
gi|300377941|gb|ADK06845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus biovar anthracis str. CI]
Length = 365
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 249
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 213 VKSAAGLGAILNKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|258510916|ref|YP_003184350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257477642|gb|ACV57961.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 361
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 161/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIVISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + + VSCP+CGR
Sbjct: 213 IKSAAGLGTLLHMGIGNTIRVSLSADPVEEVK-VARELLKVFHIVSDAVTIVSCPTCGRI 271
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I E+ + ++ + ++++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 272 DIDLISIVNELEDYVQNIRAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 330
Query: 711 VKR 713
V++
Sbjct: 331 VRK 333
>gi|388543574|ref|ZP_10146864.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M47T1]
gi|388278131|gb|EIK97703.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M47T1]
Length = 369
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D GAD+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVRVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFKDFKVSVKASDVFMAVEAYRLLATQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEV 248
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ +++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLADGIGDTIRISLAADPVEEVK-VGYDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|330504679|ref|YP_004381548.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina NK-01]
gi|328918965|gb|AEB59796.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina NK-01]
Length = 370
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCESPIK--RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A L+++ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMEAAEAF-----GLIKQQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPEALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELETRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIKD 730
K + E D L +LI+D
Sbjct: 337 SK--LTNENLVDELEKLIRD 354
>gi|325673446|ref|ZP_08153137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
equi ATCC 33707]
gi|325555467|gb|EGD25138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
equi ATCC 33707]
Length = 387
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGNVGVGSDHPVSVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 82 ADAL-----AAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 126 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMQKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 175 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 230 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGMEVPLR 313
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + G+LL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 232 IKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRA 290
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 291 QVDVYTLANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 346
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 347 GKVIKT-VPEAQIVETLIE 364
>gi|300743961|ref|ZP_07072981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa M567]
gi|311113211|ref|YP_003984433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa ATCC 17931]
gi|300380322|gb|EFJ76885.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa M567]
gi|310944705|gb|ADP40999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa ATCC 17931]
Length = 386
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 34/289 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG V IGSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQFKVGAVGIGSESPISVQSMTTTKTHDIGSTLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K NIP++ADIHF P V + +RVNPGN +
Sbjct: 78 AEAL-----PIIAKQSNIPVIADIHFQPKYVYAAIKAGCGAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + E +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAEMASDHGTSIRIGVNAGSLDKRLLEKYGHATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L A D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAAR-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAEL 370
+KS++ GTLL G+GDTIRVSL+ PP +E+ + L +L +R +L
Sbjct: 227 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVKVGTKILESLNLRPRKL 275
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
G LL G+GD + + + ++ +L+ +R K + VSCPSCGR ++ E+
Sbjct: 235 GTLLSQGIGDTIRVSLSAPPVEEVK-VGTKILESLNLRPRKLDIVSCPSCGRAQVNVWEL 293
Query: 659 SAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAM 717
+ + + H+ + +A+MGC+VNGPGE +AD G G GK ++V V+K +
Sbjct: 294 AENVTKGLEHMKVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPE 351
Query: 718 EQATDALIQ 726
+Q + L++
Sbjct: 352 DQIVETLLE 360
>gi|29829103|ref|NP_823737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
avermitilis MA-4680]
gi|50400992|sp|Q82K43.1|ISPG1_STRAW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 1
gi|29606209|dbj|BAC70272.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces avermitilis MA-4680]
Length = 385
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K++G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKEHGTPIRIGVNAGSLDRRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLNLRQRGLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGIQILESLNLRQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
++K
Sbjct: 343 GEIIK 347
>gi|423354774|ref|ZP_17332399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus IS075]
gi|401086084|gb|EJP94315.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus IS075]
Length = 370
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLIIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|229117776|ref|ZP_04247143.1| hypothetical protein bcere0017_40470 [Bacillus cereus Rock1-3]
gi|423377862|ref|ZP_17355146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1O-2]
gi|423547583|ref|ZP_17523941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB5-5]
gi|423622632|ref|ZP_17598410.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD148]
gi|228665674|gb|EEL21149.1| hypothetical protein bcere0017_40470 [Bacillus cereus Rock1-3]
gi|401179304|gb|EJQ86477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB5-5]
gi|401260752|gb|EJR66920.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD148]
gi|401636128|gb|EJS53882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1O-2]
Length = 370
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIANIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|384085564|ref|ZP_09996739.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 366
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG VAIG PI VQ+MT +T+DVA TV ++ R+ GAD+VR++V
Sbjct: 9 RRKTRQIHVGKVAIGGYAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV-AECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V A+ D +R+NPGN L+
Sbjct: 69 AEAFKAIRAQV-----ETPLVADIHFDHRIALQVMADGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDVFLAVGAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRISLAADPVEEI 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 542 ILHDLPFNEDKIGRVQA-----ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
IL +L F++ KI V+A A + LSE +++P+ I G+ + +
Sbjct: 167 ILDELNFHDVKIS-VKASDVFLAVGAYRLLSEK-VDYPLHLGITEAGGLRSG--TVKSAI 222
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD-L 655
+G LL DG+GD + + + +R F++L+ +R ++CPSC R FD +
Sbjct: 223 GLGLLLRDGIGDTIRISLAADPVEEIR-VGFDILKSLHLRQKGINLIACPSCSRQEFDVI 281
Query: 656 QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
I+A L + ++++GC+VNG GE +AD G GG I Y GK V
Sbjct: 282 NTINALEARLEDILEPMDVSVIGCVVNGIGEAKEADIGLAGGDKRSILYYRGKQV 336
>gi|423138438|ref|ZP_17126081.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371957803|gb|EHO75546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 358
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIIIQSMTNTNSADVESTVRQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AIYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALL+DG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ +E + + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKKVEKEFENEKNKIKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|239827737|ref|YP_002950361.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. WCH70]
gi|259493935|sp|C5D4Q3.1|ISPG_GEOSW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|239808030|gb|ACS25095.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. WCH70]
Length = 363
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNLTIGGNNEVIIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+TIRVSL+ P +E+ + +
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTIRVSLSADPVEEVKVAKEI 252
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + +L+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTIRVSLSADPVEEVK-VAKEILKAFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ EI E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEIEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|423200197|ref|ZP_17186777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER39]
gi|404620168|gb|EKB17067.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER39]
Length = 371
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA T+E++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATIEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVDYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLTDGIGDTLRISLAADPVEEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIATVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|373251475|ref|ZP_09539593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nesterenkonia
sp. F]
Length = 389
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 19 RRTTRNFQVGDVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPTDKD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN ++
Sbjct: 79 AEAL-----PIIARKSKIPVIADIHFQPKYVFAAIEAGCGAVRVNPGNI---------IK 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ D + + K G ++RIG N GSL R+M +G +P +VESA
Sbjct: 125 FDDK------------VGEIAQAAKDAGVSLRIGVNAGSLDKRLMDKHGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PVVMVQAY E D+PLHLGVTEAG G G
Sbjct: 173 VREAALFEEHDFHDFKISVKHHDPVVMVQAY-----EQLAERGDWPLHLGVTEAGPGFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS+ G+LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TIKSSTAFGSLLSKGIGDTIRVSLSAPPAEEVKVGAQILESLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T G+LL G+GD + + + ++ +L+ +R K E VSCPSCGR
Sbjct: 229 IKSSTAFGSLLSKGIGDTIRVSLSAPPAEEVK-VGAQILESLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE DAD G G GK ++V
Sbjct: 288 QVDVYKLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEARDADLGVASGN-GKGQIFVK 343
Query: 708 KTVVKRGIAMEQATDALI 725
VV R + +Q + LI
Sbjct: 344 GEVV-RSVPEDQIVETLI 360
>gi|403237508|ref|ZP_10916094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
10403023]
Length = 365
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGNNEVVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K +IPLV DIHF +AL+ E DKIR+NPGN +
Sbjct: 60 ACPDERAANAIPEIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRK- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASSVPLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFSGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ ++P+ H+
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASSVPLAIEAYEKAAQA-FDYPL--HLGITES 208
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + +GA+L G+G+ L + + ++ + LL+ + +S
Sbjct: 209 GTLFSGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLAANAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL +I+ E+ E S + + ++++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLIKIANEVEEYISTIKAPIKVSVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L+ GKTV K
Sbjct: 327 LFRHGKTVRK 336
>gi|379710031|ref|YP_005265236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
cyriacigeorgica GUH-2]
gi|374847530|emb|CCF64600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Nocardia cyriacigeorgica GUH-2]
Length = 377
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 12 RRKTRQLMVGNVGVGSDHPISVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 72 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 116 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRMLEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 220 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGGQILQSLNLRPRKLEIVSCP--SC 277
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 278 GRAQVDVYTLANEVTAGLEGMEVPLR 303
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 229 GALLSEGIGDTIRVSLSAPPAEEIK-VGGQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 287
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 288 ANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT- 342
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 343 VPEAQIVETLIE 354
>gi|452746468|ref|ZP_21946288.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri NF13]
gi|452009721|gb|EME01934.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri NF13]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGNVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELETRVEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|210622745|ref|ZP_03293337.1| hypothetical protein CLOHIR_01285 [Clostridium hiranonis DSM 13275]
gi|210154077|gb|EEA85083.1| hypothetical protein CLOHIR_01285 [Clostridium hiranonis DSM 13275]
Length = 351
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V GNV IG ++PI VQ+M DT+D T+ ++ R+ + G +LVR+ V
Sbjct: 5 RKKTRVVTCGNVKIGGDNPISVQSMANTDTRDAKATIAQIKRLEEAGCELVRVAVPDMEA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ EIK + NIPL+ADIHF +AL+ E D +R+NPGN D+
Sbjct: 65 AEKISEIKAGI-----NIPLIADIHFDYRLALKAIEQGIDGVRINPGNIGDK-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ + EV VE CK +RIG N GSL ++ YG+ MVESA
Sbjct: 112 ----------ERVREV----VEACKANNIGIRIGVNGGSLEKHLLEKYGEPCAEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AY L+ ++ DYPLH+G+TE+G + G
Sbjct: 158 MGHIKILEDLDFHDIVISLKNSDIFRTVEAYELMSEKV-----DYPLHIGITESGSIKRG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G+LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGSLLMKGIGDTMRISLTGDPVEEV 244
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 531 LEILKDIDATMILHDLPF---NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR 587
++IL+D+D HD+ N D V+A +E +SE +++P+ I I R
Sbjct: 161 IKILEDLD----FHDIVISLKNSDIFRTVEA----YELMSEK-VDYPLHIGITESGSIKR 211
Query: 588 DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPS 647
I + VG+LL+ G+GD + + G + ++ ++L+ + N K + +SCP+
Sbjct: 212 G--TIKSSIGVGSLLMKGIGDTMRISLTGDPVEEVK-VGKDILRSLGLLNDKIKIISCPT 268
Query: 648 CGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
CGRT +L ++ E E+ +L +++AIMGC+VNGPGE +AD G GG +
Sbjct: 269 CGRTQINLIDMVNEAEERIGNLDKDITVAIMGCVVNGPGEAREADIGIAGGKGEGLLFKK 328
Query: 707 GKTVVKRGIAMEQATDALIQLIK 729
G+ + R I E D L++ I+
Sbjct: 329 GEII--RKIPAENLIDELVKEIE 349
>gi|150390442|ref|YP_001320491.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alkaliphilus metalliredigens QYMF]
gi|149950304|gb|ABR48832.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alkaliphilus metalliredigens QYMF]
Length = 348
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 167/290 (57%), Gaps = 35/290 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKT+ + GNV +G H + VQ+M T+D ++++ V E++R+ + G D+VRI V
Sbjct: 1 MRRKTKEIQCGNVMVGGNHQVSVQSMITSDPRNISSAVAEILRLEEAGCDIVRIAVPTME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A ++IK K IP+VADIHF +AL + + D +R+NPGN D
Sbjct: 61 SAKNIYDIK-----KQTTIPIVADIHFDYRLALESIKQGIDGLRLNPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +V + KK +RIG N GSL +++ YG +P +VES
Sbjct: 108 --------------EERVRKVVNQAKKNRIPIRIGVNGGSLEKQLLEKYGHATPEALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A RI +DF + + S+KAS+ + V AY+L+ +++ YPLHLG+TEAG +
Sbjct: 154 AMGHVRILEDMDFDDIVISLKASDVQLTVAAYQLISKKVH-----YPLHLGITEAGTVKT 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAEL 370
G +KSAIGIG+LL G+GDTIRVSLT P +E+ ++ L +LG++ E+
Sbjct: 209 GTIKSAIGIGSLLLMGIGDTIRVSLTGDPVEEVYVGKQILKSLGLKQGEV 258
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 542 ILHDLPFNED----KIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL D+ F++ K VQ ++ +S+ +++P+ H+ I +
Sbjct: 160 ILEDMDFDDIVISLKASDVQLTVAAYQLISKK-VHYPL--HLGITEAGTVKTGTIKSAIG 216
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G+LL+ G+GD + + G + + +L+ ++ + +SCP+CGR +L +
Sbjct: 217 IGSLLLMGIGDTIRVSLTGDPVEEVY-VGKQILKSLGLKQGEVTIISCPTCGRCNINLIK 275
Query: 658 ISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
++ E+ K L + +AIMGC VNGPGE DAD G GG + GK + K
Sbjct: 276 LADEVERKIGQLKKPIKVAIMGCAVNGPGEAKDADIGIAGGIDSALLFKKGKVIKK 331
>gi|452975067|gb|EME74886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
sonorensis L12]
Length = 370
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIPEIK-----KRISIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ + + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEDYIAKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|52081042|ref|YP_079833.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319645000|ref|ZP_07999233.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
BT1B_CT2]
gi|404489924|ref|YP_006714030.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423683016|ref|ZP_17657855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthetase [Bacillus
licheniformis WX-02]
gi|73621080|sp|Q65HA9.1|ISPG_BACLD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|52004253|gb|AAU24195.1| IspG protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348921|gb|AAU41555.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317392809|gb|EFV73603.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
BT1B_CT2]
gi|383439790|gb|EID47565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthetase [Bacillus
licheniformis WX-02]
Length = 370
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIPEIK-----KRISIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ + + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEDYIAKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|359426484|ref|ZP_09217568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amarae NBRC 15530]
gi|358238273|dbj|GAB07150.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amarae NBRC 15530]
Length = 400
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+H I VQ+M T T DV T++++ ++ G D+VR+ + +
Sbjct: 32 RRKTRQIMVGSVGVGSDHQISVQSMCTTKTHDVNSTLQQIAQLTASGCDMVRVACPRQED 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + NIP++ADIHF P A C +RVNPGN
Sbjct: 92 ADALPEIA-----RKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 135
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 136 ----KEFDGRVKEV-------AKAAGAAGIPIRIGVNAGSLDKRLMEKYGKATPEALVES 184
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 185 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 239
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 240 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 297
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 298 GRAQVDVYKLANEVTAGLEGMEVPLR 323
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 249 GALLSEGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 305
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 306 KLANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 361
>gi|392420163|ref|YP_006456767.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri CCUG 29243]
gi|390982351|gb|AFM32344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri CCUG 29243]
Length = 370
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGNVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEI--SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
FD+ + EIR + +P + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 SFDVVKTMNELEIRVEDLLVP-MDVAVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDGKP 335
Query: 710 VVKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 336 AQK--LNNENLVDELEQLIR 353
>gi|310779244|ref|YP_003967577.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Ilyobacter
polytropus DSM 2926]
gi|309748567|gb|ADO83229.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Ilyobacter
polytropus DSM 2926]
Length = 370
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 159/282 (56%), Gaps = 35/282 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+R + VGN+ IG + + +Q+MT T D+ TV+++ + + G LVR+TV A+A
Sbjct: 20 SRKIKVGNIYIGGDSEVIIQSMTNTKTSDIKATVKQIKELENAGCQLVRVTVNDTEAAEA 79
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K +IPL ADIHF +A+ E DK+R+NPGN + D
Sbjct: 80 IKEIK-----KQISIPLAADIHFDYRLAISAMENGVDKLRINPGNIGN-----------D 123
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
D+ + +VEK K+Y +RIG N GSL I+ YG +P MVES
Sbjct: 124 DK-----------VAMVVEKAKEYNIPIRIGVNAGSLEKSILEKYGRPTPEAMVESGLYH 172
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K F + + S+K+SN +MV+AYR++ + DYPLHLGVTEAG G +K
Sbjct: 173 VRLLEKFGFEDIIISLKSSNVKMMVRAYRMMREIV-----DYPLHLGVTEAGTAFQGTVK 227
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
S+IGIG LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 228 SSIGIGGLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 269
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +G LLVD +GD + L E P ++ ++ +L+ +R TE +SCP+C
Sbjct: 226 VKSSIGIGGLLVDDIGDTIRVSLTENPVEEIKVAKE----ILKVLGLREEGTEIISCPTC 281
Query: 649 GRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL +++ ++ ++ S V IA+MGC+VNGPGE +AD+G GG
Sbjct: 282 GRTEIDLIDLAKKVEQEFSTFEKKVKIAVMGCVVNGPGEAREADYGVAGG 331
>gi|392960431|ref|ZP_10325899.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans DSM 17108]
gi|421054812|ref|ZP_15517777.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pelosinus
fermentans B4]
gi|421058892|ref|ZP_15521537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans B3]
gi|421066775|ref|ZP_15528335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A12]
gi|421071674|ref|ZP_15532790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A11]
gi|392440493|gb|EIW18173.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pelosinus
fermentans B4]
gi|392446939|gb|EIW24210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A11]
gi|392453244|gb|EIW30131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A12]
gi|392455008|gb|EIW31815.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans DSM 17108]
gi|392459934|gb|EIW36294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans B3]
Length = 359
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 185/369 (50%), Gaps = 61/369 (16%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG V +G PI VQ+MT T DVAGTV ++M++ G D+VR+ V
Sbjct: 7 RRMTNPVYVGKVMVGGRAPISVQSMTNTKTDDVAGTVAQIMQLGSAGCDIVRLAVPDMSA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + IPL+ADIHF A+ E D +R+NPGN AD
Sbjct: 67 ALAIKEIKSKV-----QIPLIADIHFDYRFAIAAMENGVDALRINPGNIADA-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVES 261
H+ + +V++ KK +RIG N GSL I+ YG +P GMVES
Sbjct: 114 ----------THV----AIIVKEAKKRSIPIRIGVNAGSLEKSILEKYGGHPTPAGMVES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KLDF + S+KA++ + + AY+L+ + +YPLHLG+TEAG +
Sbjct: 160 AMQHIAILEKLDFRDIKISLKANDVPMTINAYQLMSETV-----NYPLHLGITEAGTIKS 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA------------- 367
G +KSA+GIG LL G+GDTIRVSLT P +EI L +LG++
Sbjct: 215 GMIKSAVGIGALLAQGIGDTIRVSLTGDPVEEIKAANEILKSLGLKEYGPTLISCPTCGR 274
Query: 368 -----AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDY-------RGVLHRDGSV 415
AE+ + V + R F + E +E D +G++ R G +
Sbjct: 275 CNINLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGGKGQGLVFRKGEI 334
Query: 416 LMSVSLDQL 424
+ VS DQL
Sbjct: 335 VKRVSEDQL 343
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 534 LKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
+DI ++ +D+P + ++ +SE +N+P+ H+ +I
Sbjct: 172 FRDIKISLKANDVPMTINA----------YQLMSET-VNYPL--HLGITEAGTIKSGMIK 218
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
+ +GALL G+GD + + G + ++ + +L+ ++ +SCP+CGR
Sbjct: 219 SAVGIGALLAQGIGDTIRVSLTGDPVEEIKAAN-EILKSLGLKEYGPTLISCPTCGRCNI 277
Query: 654 DLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+L EI+ ++ +K S + +A+MGC+VNGPGE +AD G GG G+ ++ +VK
Sbjct: 278 NLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGG-KGQGLVFRKGEIVK 336
Query: 713 RGIAMEQATDAL 724
R ++ +Q AL
Sbjct: 337 R-VSEDQLVTAL 347
>gi|260494839|ref|ZP_05814969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_33]
gi|260198001|gb|EEW95518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_33]
Length = 291
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 156/277 (56%), Gaps = 34/277 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTR + VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ + A
Sbjct: 3 RKTRVIKVGNLEIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIKAA 62
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 63 EAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG----------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+D+ +K +VE K+ +RIG N GS+ I+ Y +VESA
Sbjct: 107 SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVESAM 155
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G
Sbjct: 156 YHIRLLEKFDFFDIMVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGT 210
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 211 IKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALL+DG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSEGVEIISCPTC 266
Query: 649 GRTLFDL 655
GRT DL
Sbjct: 267 GRTEIDL 273
>gi|251798423|ref|YP_003013154.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. JDR-2]
gi|247546049|gb|ACT03068.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus sp. JDR-2]
Length = 369
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ T V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+TV K
Sbjct: 3 LRKDTVPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNKE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AADAIKEIK-----KRIHIPLVADIHFDYRLALQAIENGIDKVRINPGNIG-RREKIEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 116 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY M YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAY-----SMAAEKIKYPLHLGITEAGTLHS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ GIG LL G+G+T+R+SL+ P +E+ R L
Sbjct: 211 GTIKSSAGIGALLAMGIGNTVRISLSADPVEEVKVAREL 249
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
++ + +P+ I +H + AG +GALL G+G+ + + + ++
Sbjct: 189 MAAEKIKYPLHLGITEAGTLHSGTIKSSAG--IGALLAMGIGNTVRISLSADPVEEVK-V 245
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGP 684
+ LL+ + +SCP+CGR DL I+ E+ E S L + ++++GC VNGP
Sbjct: 246 ARELLKTFGLITNAATLISCPTCGRLDIDLFSIANEVEEYISKLKVPIKVSVLGCAVNGP 305
Query: 685 GEMADADFGYVGGAPGKIDLY 705
GE +AD G + GA G+ L+
Sbjct: 306 GEAREADIG-IAGARGEGMLF 325
>gi|403722370|ref|ZP_10945005.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rhizosphera NBRC 16068]
gi|403206682|dbj|GAB89336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rhizosphera NBRC 16068]
Length = 384
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 16 RRKTRQIQVGRVGVGSDHPISVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 75
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S + ++ IP++ADIHF P A C +RVNPGN +
Sbjct: 76 ADAL-----STIAEHSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNIKEF------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
D KE+ H G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----DGRVKEVAH----------AASAAGVPIRIGVNAGSLDPRLLKKYGKATPEALVES 168
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 169 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 223
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL DG+GDTIRVSL+ PP +E+ + L +L +R +L+ +
Sbjct: 224 GTIKSAVAFGALLSDGIGDTIRVSLSAPPAEEVKVGDQILQSLNLRPRKLE--IVSCPSC 281
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG +V R
Sbjct: 282 GRAQVDVYKLADEVTAGLEGLDVPLR 307
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL DG+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 233 GALLSDGIGDTIRVSLSAPPAEEVKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 289
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 290 KLADEV---TAGLEGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 345
>gi|51892639|ref|YP_075330.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Symbiobacterium thermophilum IAM 14863]
gi|73621105|sp|Q67PA7.1|ISPG_SYMTH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|51856328|dbj|BAD40486.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Symbiobacterium thermophilum IAM 14863]
Length = 370
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG PI VQ+MT DT+DV + ++ + + G D+VR+ E
Sbjct: 4 RRKTRAVKVGRVQIGGGAPITVQSMTKCDTRDVPEVLRQIRALEEAGCDIVRVAAP-TME 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A CF+ ++K NIPLVAD+HF +AL+V E DK+R+NPGN R
Sbjct: 63 AAECFK----EIRKGCNIPLVADVHFDYRIALKVLEAGIDKLRINPGNIGAR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+EEV V CK G +RIG N GSL + + YG + GMVESA
Sbjct: 111 ----------WKVEEV----VRACKDRGVPIRIGVNAGSLEEEFLEKYGYPTADGMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I +LDFH+ + S+K+S M++AYR L ++ DYPLH+GVTEAG G
Sbjct: 157 LKHVAILEELDFHDIVISIKSSRVDQMIEAYRKLSEKV-----DYPLHVGVTEAGTPFAG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIGT+L +G+GDTIRVSL+ +E+
Sbjct: 212 TIKSAVGIGTILAEGIGDTIRVSLSTDCVEEV 243
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + + + IL+++D HD+ + K RV + LSE +++P+ H+
Sbjct: 154 ESALKHVAILEELD----FHDIVIS-IKSSRVDQMIEAYRKLSEK-VDYPL--HVGVTEA 205
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
I + +G +L +G+GD + + + +R + +L+ +R +S
Sbjct: 206 GTPFAGTIKSAVGIGTILAEGIGDTIRVSLSTDCVEEVR-VGYEILKALGLRTRGINIIS 264
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CPSCGR DL +++ E+ + H+ +++A+MGC+VNGPGE A+AD GG G
Sbjct: 265 CPSCGRVQIDLVKVANEVERRLQHIDVPLNVAVMGCVVNGPGEAAEADVALFGG-KGVGM 323
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIK 729
LYVG V++ E+ +AL++L++
Sbjct: 324 LYVGGERVRK-TTEEEMVEALVELVE 348
>gi|104780240|ref|YP_606738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
entomophila L48]
gi|166217122|sp|Q1IEI1.1|ISPG_PSEE4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|95109227|emb|CAK13924.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas entomophila L48]
Length = 369
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----KLVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + L + +A++GC+VNGPGE ++ G GG P
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKESHVGLTGGTP 325
>gi|77362057|ref|YP_341631.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas haloplanktis TAC125]
gi|123586938|sp|Q3ICZ5.1|ISPG_PSEHT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|76876968|emb|CAI89185.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis TAC125]
Length = 372
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVGATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ SP ++ESA
Sbjct: 115 -------------EERIRAVVDAAREHNIPIRIGVNGGSLERDLQEKYGEPSPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVNILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGASRRSGLYI 331
>gi|431926421|ref|YP_007239455.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri RCH2]
gi|431824708|gb|AGA85825.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri RCH2]
Length = 370
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKR-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRVSLAADPVEEI 248
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLADGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELEARVEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|451334929|ref|ZP_21905499.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Amycolatopsis azurea DSM 43854]
gi|449422468|gb|EMD27842.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Amycolatopsis azurea DSM 43854]
Length = 377
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 12 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN +
Sbjct: 72 AEALPAIA-----RKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 117 KFDDQVKE-----------IAKAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF++ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 166 LWEASLFAEHDFYDVKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L ++ +L+ P
Sbjct: 221 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLKERKLEIVSCP--SCG 278
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 279 RAQVDVYTLAEQVTAGLEGMEVPLR 303
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 194 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 250
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ ++ K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 251 EVK-VGIQILQSLNLKERKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGMEVPLRVAV 306
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 307 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 341
>gi|407001695|gb|EKE18628.1| hypothetical protein ACD_9C00277G0001 [uncultured bacterium]
Length = 349
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 33/273 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T + + V VGN+ +G +P+RVQ+M DT+DV TV++++ + +G ++VR+ V
Sbjct: 2 TKKYMSSVVKVGNLKLGGNNPVRVQSMCNTDTRDVKATVKQILALEKEGCEIVRVAVPDM 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQ 201
A A +IK+ + +IPLVADIHF +AL + + DK+R+NPGN
Sbjct: 62 AAAKAIGKIKSKI-----HIPLVADIHFDYLLALEAIKQGIDKVRINPGNIGS------- 109
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
+E+V +VE CKK +RIG N GS+ +++ YG +PR VES
Sbjct: 110 --------------VEKV-QAVVEACKKKKIPIRIGVNVGSIEKKLLDKYGATPRAAVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A RI KLDFH+ + S+K S M++AYR+L ++ YPLHLGVT AG
Sbjct: 155 ALGHVRILEKLDFHDIVVSIKFSEIPPMLEAYRMLGKKI-----KYPLHLGVTHAGTSFM 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +K+AIG+GTLL++G+G T+RVSLT P +E+
Sbjct: 210 GSIKNAIGVGTLLEEGIGATMRVSLTADPLEEV 242
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
VG LL +G+G + + + ++ + +L+ +R E +SCP+CGRT DL
Sbjct: 217 GVGTLLEEGIGATMRVSLTADPLEEVQ-VGWAILRSLDLRRRGPEIISCPTCGRTQIDLI 275
Query: 657 EISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
++ ++ S + + +A+MGC+VNGPGE +AD G GG
Sbjct: 276 PLTKKVEALLSKIDKPIKVAVMGCVVNGPGEAREADVGVAGG 317
>gi|257055052|ref|YP_003132884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora viridis DSM 43017]
gi|256584924|gb|ACU96057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora viridis DSM 43017]
Length = 383
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + + + K +G +RIG N GSL RIM+ +G +P + ESA
Sbjct: 123 KFDDKVGE-----------IAQAAKDHGTPIRIGVNAGSLDPRIMAKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K +PVVMV+AY +L E DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHHDPVVMVRAYEILAEE-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPIEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLQGLEVPLR 309
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEE-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPIE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGHQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLQGLEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVIK 347
>gi|363895304|ref|ZP_09322302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium ACC19a]
gi|361957742|gb|EHL11047.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium ACC19a]
Length = 348
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVKCGNVKIGGNNPIVIQSMTNTKTSDFISTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 598 VGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + L P ++ D + +LQ N + +SCP+C RT D
Sbjct: 218 IGYLLLNGIGDTIRVSLTADPVEEIDVAK----MILQNIGY-NFGVQVISCPTCARTDID 272
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ ++ + T + + +A+MGC+VNGPGE DAD G GG + GKT+ K
Sbjct: 273 IINLANNVESATRGIKKDIKVAVMGCVVNGPGEAKDADIGIAGGKGEALFFKDGKTLKK 331
>gi|407275702|ref|ZP_11104172.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
sp. P14]
gi|407275709|ref|ZP_11104179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
sp. P14]
Length = 384
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGDVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----AAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+S YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGAAGIPIRIGVNAGSLDPRILSKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDLKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEI 259
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 236 GALLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 294
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 295 ADEV---TAGLQGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVVKT- 349
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 350 VPEAQIVETLIE 361
>gi|429332406|ref|ZP_19213131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida CSV86]
gi|428762905|gb|EKX85095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida CSV86]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQINRLIDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEV 248
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLADGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTP 325
>gi|284992357|ref|YP_003410911.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geodermatophilus obscurus DSM 43160]
gi|284065602|gb|ADB76540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geodermatophilus obscurus DSM 43160]
Length = 387
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 154/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 20 RRKTRQLMVGDVGVGSDHPVSVQSMTTTKTADINATLQQIAELTASGCQIVRVAVPDTDD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ + IP++ADIHF P A C +RVNPGN +
Sbjct: 80 AEAL-----PIIARKSQIPVIADIHFQPRYVFAAIDAGCA-AVRVNPGN----------I 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+ DD+ + + K G +RIG N GSL R+++ YG +P +VES
Sbjct: 124 KKFDDKVGE-----------IARAAKGAGIPIRIGVNAGSLDKRLLAKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF + S+K +NPVVMV+AY LL A+ DYPLHLGVTEAG
Sbjct: 173 ALWECSLFEEHDFRDIKISVKHNNPVVMVRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 GTIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 260
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 230 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEVK-VGTQILESLNLRQRGLEIVSCPSCGRA 288
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 289 QVDVYKLADEV---TAGLDGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 344
Query: 708 KTVVKRGIAMEQATDALIQ 726
VVK + Q + LI+
Sbjct: 345 GEVVKT-VPESQIVETLIE 362
>gi|402838219|ref|ZP_10886731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium OBRC8]
gi|402273723|gb|EJU22918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium OBRC8]
Length = 348
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVRCGNVKIGGNNPIVIQSMTNTKTSDYTSTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGA 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 598 VGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + L P ++ D + +LQ N + +SCP+C RT D
Sbjct: 218 IGYLLLNGIGDTIRVSLTADPVEEIDVAK----MILQNIGY-NFGVQVISCPTCARTDID 272
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ ++ ++ T + + +A+MGC+VNGPGE DAD G GG + GKT+ K
Sbjct: 273 IINLANKVENATRGIKKDIKVAVMGCVVNGPGEAKDADIGIAGGKGEALFFKDGKTLKK 331
>gi|269956002|ref|YP_003325791.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Xylanimonas cellulosilytica DSM 15894]
gi|269304683|gb|ACZ30233.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Xylanimonas cellulosilytica DSM 15894]
Length = 396
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG VA+G + PI VQ+MTT T D+ T++++ + G D+VR+ V +
Sbjct: 30 RRPTRKIQVGKVAMGGDAPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVAVPTADD 89
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A I + IP+VADIHF P E +RVNPGN +
Sbjct: 90 AAALPAIA-----RKSQIPVVADIHFQPKYVFAAIEAGCAGVRVNPGN----------IR 134
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + + + K +G A+RIG N GSL R+++ YG +P MVESA
Sbjct: 135 KFDDQIKD-----------IAQAAKDHGTALRIGVNAGSLDPRLLAKYGKATPEAMVESA 183
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG G
Sbjct: 184 IWEASLFEEHDFHDFAISVKHNDPVVMVRAY-----EMLSEAGDWPLHLGVTEAGPAFQG 238
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 239 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 270
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E LSE ++P+ H+ I + T GALL G+GD + + +
Sbjct: 212 RAYEMLSEAG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 268
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ ++ K E VSCPSCGR D+ ++ + T+ L G+ + A+
Sbjct: 269 EVK-VGIQILQALNLKERKLEIVSCPSCGRAQVDVYTLAERV---TAGLEGLDVPLRVAV 324
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 325 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 359
>gi|308174296|ref|YP_003921001.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens DSM 7]
gi|307607160|emb|CBI43531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens DSM 7]
Length = 375
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVTVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|363893173|ref|ZP_09320312.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM2]
gi|361961697|gb|EHL14880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM2]
Length = 348
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVKCGNVKIGGNNPIVIQSMTNTKTSDFISTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGA 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 598 VGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + L P ++ D + +LQ N + +SCP+C RT D
Sbjct: 218 IGYLLLNGIGDTIRVSLTADPVEEIDVAK----MILQNIGY-NFGVQVISCPTCARTDID 272
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ ++ ++ T + + +A+MGC+VNGPGE DAD G GG + GKT+ K
Sbjct: 273 IINLANKVENATRGIKKDIKVAVMGCVVNGPGEAKDADIGIAGGKGEALFFKDGKTLKK 331
>gi|289764731|ref|ZP_06524109.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. D11]
gi|289716286|gb|EFD80298.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. D11]
Length = 354
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 156/277 (56%), Gaps = 34/277 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTR + VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ + A
Sbjct: 3 RKTRVIKVGNLEIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIKAA 62
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 63 EAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG----------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+D+ +K +VE K+ +RIG N GS+ I+ Y +VESA
Sbjct: 107 SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVESAM 155
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G
Sbjct: 156 YHIRLLEKFDFFDIMVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGT 210
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 211 VKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALL+DG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSKGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ +E + + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKKVEKEFENEKNKIKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|187934639|ref|YP_001885465.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum B str. Eklund 17B]
gi|187722792|gb|ACD24013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum B str. Eklund 17B]
Length = 349
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 150/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGN+ +G + PI +Q+MTT DT++V T+ ++ + + G D+VR V
Sbjct: 3 RRISRKVKVGNIYVGGDAPITIQSMTTTDTRNVEDTLNQINNLCEAGCDIVRCAVLDMDA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI IP+VADIHF +AL E +R+NPGN
Sbjct: 63 AKALREITTK-----SKIPVVADIHFDYRLALESIESGVSALRINPGNIGS--------- 108
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE + EKCK+ +RIG N GSL I+ YG + G+VESA
Sbjct: 109 -------------EERIRLVAEKCKEKNIPIRIGVNSGSLEKDILERYGKPTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KL+FHN + S+K+S+ V+M+ YRL+ + DYPLHLGVTE+G G
Sbjct: 156 LRHVEILEKLNFHNIVISIKSSDVVMMIDCYRLIGDK-----CDYPLHLGVTESGTVTKG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIGTLL +G+GDTIRVSLT P EI
Sbjct: 211 TIKSSIGIGTLLAEGIGDTIRVSLTSDPVDEI 242
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL +G+GD + + D ++ +L+ ++ +VSCP+CGRT
Sbjct: 212 IKSSIGIGTLLAEGIGDTIRVSLTSDPVDEIK-VGIEILKSLGLKKGGVNFVSCPTCGRT 270
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
+L +I+ E+ ++ + + +A+MGC+VNGPGE +AD G GG
Sbjct: 271 QINLIKIANEVEKRLENCNKDIKVAVMGCVVNGPGEAREADIGIAGG 317
>gi|433459020|ref|ZP_20416886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
crystallopoietes BAB-32]
gi|432192413|gb|ELK49286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
crystallopoietes BAB-32]
Length = 388
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ P+ VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPVSVQSMTTTPTTDINATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN +
Sbjct: 79 AEAL-----PIIAKKSKIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 123 RKFDDQVKE-----------ISKAAKDAGVSIRIGVNAGSLDPRLLEKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG
Sbjct: 172 AVWEASLFEEHDFHDFKISVKHNDPVVMVRAY-----EMLAERGDWPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 227 GTIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGLQILQSLNLRERKLEIVSCP--SC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 GRAQVDVYTLADQVTAGLEGMEVPLR 310
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 201 RAYEMLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 258 EIK-VGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLADQV---TAGLEGMEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
MGC+VNGPGE +AD G G GK ++V V+ R + +Q + LI
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVI-RTVPEDQIVETLI 360
>gi|256823055|ref|YP_003147018.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kangiella
koreensis DSM 16069]
gi|256796594|gb|ACV27250.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kangiella
koreensis DSM 16069]
Length = 379
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 170/313 (54%), Gaps = 37/313 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ +AD GAD+VR++V +
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVGATVAQIRALADTGADIVRVSVPTMKA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +++ +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAF-----KFIKQQSPVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +VE + +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EERVKAVVEAARARNIPIRIGVNAGSLEKDLQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + + +F ++ S+KAS+ + V AYR+L E+ D PLHLG+TEAG G
Sbjct: 162 YRHIEMLERHNFKDYKISLKASDVFMTVAAYRILAKEI-----DNPLHLGITEAGSFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+G+G LL +G+GDTIRVSL P +E+ L +LG+R + P
Sbjct: 217 AVKSAVGLGMLLAEGIGDTIRVSLAADPVEEVKVGYDILKSLGLRQRGINLIACP--SCS 274
Query: 382 RHYFDFQRRSGQL 394
R FD + +L
Sbjct: 275 RQQFDVIKTVNEL 287
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
AA R+ +N L+ + F +G + + +G LL +G+GD + +
Sbjct: 190 AAYRILAKEIDNPLHLGITEAGSFRSG------AVKSAVGLGMLLAEGIGDTIRVSLAAD 243
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAI 676
+ ++ +++L+ +R ++CPSC R FD+ + E+ ++ + + +A+
Sbjct: 244 PVEEVK-VGYDILKSLGLRQRGINLIACPSCSRQQFDVIKTVNELEQRLEDVNEHIDVAV 302
Query: 677 MGCIVNGPGEMADADFGYVGG 697
+GC+VNGPGE + G GG
Sbjct: 303 IGCVVNGPGEAKEVSIGLTGG 323
>gi|386287226|ref|ZP_10064401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium BDW918]
gi|385279758|gb|EIF43695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium BDW918]
Length = 370
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + +GNVA+G + PI VQ+MT +T DVA TV ++ R+ AD+VR++V
Sbjct: 9 RRVSRQIHIGNVAVGGDAPISVQSMTNTETCDVAATVAQIKRLEAACADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K ++PLVADIHF +A++VAE D +R+NPGN
Sbjct: 69 AEAFREIR-----KQVSVPLVADIHFDHKIAIKVAEYGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++ K + +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVIDAAKYHNIPIRIGVNAGSLEKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KLDF NF S+KAS+ + V AYR + A++ D PLHLG+TEAG G
Sbjct: 162 MRHIDILDKLDFQNFKLSVKASDVFMAVAAYRQIAAQI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSAVGLGLLLMDGIGDTIRVSLAADPVEEV 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ + +L+ ++R +++CPSC R
Sbjct: 218 VKSAVGLGLLLMDGIGDTIRVSLAADPVEEVK-VGYEILKSLKLRTKGINFIACPSCSRQ 276
Query: 652 LFD----LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
FD + E+ A + + T L +A++GCIVNGPGE +A+ G GG P + G
Sbjct: 277 NFDVISTMNELEARLDDVTIPL---DVAVIGCIVNGPGEAKEAEIGLTGGTPNNLVYVAG 333
Query: 708 K 708
K
Sbjct: 334 K 334
>gi|26987589|ref|NP_743014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida KT2440]
gi|386010516|ref|YP_005928793.1| protein IspG [Pseudomonas putida BIRD-1]
gi|32129667|sp|Q88PJ7.1|ISPG_PSEPK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|24982265|gb|AAN66478.1|AE016276_13 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida KT2440]
gi|313497222|gb|ADR58588.1| IspG [Pseudomonas putida BIRD-1]
Length = 369
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|148546127|ref|YP_001266229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida F1]
gi|395447291|ref|YP_006387544.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida ND6]
gi|397696917|ref|YP_006534800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt [Pseudomonas
putida DOT-T1E]
gi|421524499|ref|ZP_15971121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida LS46]
gi|166217124|sp|A5VYT5.1|ISPG_PSEP1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|148510185|gb|ABQ77045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida F1]
gi|388561288|gb|AFK70429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida ND6]
gi|397333647|gb|AFO50006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt [Pseudomonas
putida DOT-T1E]
gi|402751678|gb|EJX12190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida LS46]
Length = 369
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|452946793|gb|EME52286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
ruber BKS 20-38]
Length = 384
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGDVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+S YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRILSKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDLKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEI 259
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 236 GALLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 294
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 295 ADEV---TAGLQGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVVKT- 349
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 350 VPEAQIVETLIE 361
>gi|325272135|ref|ZP_08138567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. TJI-51]
gi|324102731|gb|EGC00146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. TJI-51]
Length = 369
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLARQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|431800908|ref|YP_007227811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida HB3267]
gi|430791673|gb|AGA71868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida HB3267]
Length = 369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTP 325
>gi|359456416|ref|ZP_09245577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20495]
gi|358046531|dbj|GAA81826.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20495]
Length = 372
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 ADAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYI 331
>gi|386842867|ref|YP_006247925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374103168|gb|AEY92052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451796159|gb|AGF66208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 378
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 160/285 (56%), Gaps = 34/285 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + K IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDKRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L + DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMR 366
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +LG+R
Sbjct: 220 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEVKVGLQILQSLGLR 264
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +LQ +R E VSCPSCGR
Sbjct: 221 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEVK-VGLQILQSLGLRQRGLEIVSCPSCGRA 279
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 280 QVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 335
Query: 708 KTVVK 712
V+K
Sbjct: 336 GEVIK 340
>gi|331698470|ref|YP_004334709.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia dioxanivorans CB1190]
gi|326953159|gb|AEA26856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia dioxanivorans CB1190]
Length = 380
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 153/278 (55%), Gaps = 33/278 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTADVNATLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA I + IP++ADIHF P E +RVNPGN +
Sbjct: 78 ADALPAIA-----RKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAAAARDRGIPIRIGVNAGSLDKRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDVKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPEFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA+ G LL G+GDTIRVSL+ PP E+ R++
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVNEVKVGRQI 264
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYELLAEQ-CDYPL--HLGVTEAGPEFQGTIKSAVAFGALLSQGIGDTIRVSLSAPPVN 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ ++ + E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGRQILESLNLKPRRLEIVSCPSCGRAQVDVYKLADEV---TAGLTGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|423489465|ref|ZP_17466147.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BtB2-4]
gi|423495188|ref|ZP_17471832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER057]
gi|423498018|ref|ZP_17474635.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER074]
gi|401151281|gb|EJQ58733.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER057]
gi|401161305|gb|EJQ68672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER074]
gi|402431701|gb|EJV63765.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BtB2-4]
Length = 370
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ +G + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKHGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+ L+ V
Sbjct: 275 EIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQV 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|421528929|ref|ZP_15975480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida S11]
gi|402213566|gb|EJT84912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida S11]
Length = 369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|398845267|ref|ZP_10602308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM84]
gi|398253719|gb|EJN38835.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM84]
Length = 369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|399519575|ref|ZP_10760370.1| 4-hydroxy-3-methylbut-2-en-1-yl diphospha [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112671|emb|CCH36928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphospha [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 370
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR++R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ + GAD+V
Sbjct: 2 HCESPIK--RRQSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLENAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGRIK-----QQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPAALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELESRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIKD 730
K + E D L +LI+D
Sbjct: 337 SK--LTNENLVDELEKLIRD 354
>gi|384160154|ref|YP_005542227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens TA208]
gi|384165084|ref|YP_005546463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens LL3]
gi|384169223|ref|YP_005550601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens XH7]
gi|328554242|gb|AEB24734.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens TA208]
gi|328912639|gb|AEB64235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens LL3]
gi|341828502|gb|AEK89753.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens XH7]
Length = 375
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|429212020|ref|ZP_19203185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M1]
gi|428156502|gb|EKX03050.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M1]
Length = 370
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 160/281 (56%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+C S K RR++R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCASPIK--RRQSRKIWVGSVPVGGDAPIAVQSMTNTDTLDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGKIK-----QQVRVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ + +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVDAARDKNIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA ++LDF NF S+KAS+ + V AYRLL E+ + PLHLG+
Sbjct: 153 TPEALLESAMRHVEHLQRLDFQNFKVSVKASDVFMAVAAYRLLAKEI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P + GK
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHIGLTGGTPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L +LI+
Sbjct: 337 QK--LQNENLVDELERLIR 353
>gi|167031911|ref|YP_001667142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida GB-1]
gi|189045792|sp|B0KPI7.1|ISPG_PSEPG RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166858399|gb|ABY96806.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida GB-1]
Length = 369
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|388784599|gb|AFK78072.1| XiaF [Streptomyces sp. SCSIO 02999]
Length = 383
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 19 RRKTRQLQVGQVGVGSDHPVSVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN
Sbjct: 79 AEALPAIA-----RKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 121
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 122 ---------IKKFDDKVGEIARAAKDHGTPIRIGVNAGSLDARLMRKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH S+K ++PVVM++AY +L + DYPLHLGVTEAG G
Sbjct: 173 LWEASLFAEHDFHELKISVKHNDPVVMIRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TVKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ + + GALL G+GD + + +
Sbjct: 201 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTVKSAVAFGALLRQGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 258 EVK-VGAQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVVK 348
>gi|90021081|ref|YP_526908.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharophagus degradans 2-40]
gi|123277277|sp|Q21KT3.1|ISPG_SACD2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|89950681|gb|ABD80696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharophagus degradans 2-40]
Length = 370
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+VA+G + PI +Q+MT +T DV TV ++ RI GAD+VR++V
Sbjct: 9 RRKSRQIMVGDVAVGGDAPITIQSMTNTETTDVEATVAQIERIQMAGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K +IPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 69 AEAFGAIR-----KRVSIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+K + +RIG N GSL + + YG+ +P +VESA
Sbjct: 115 -------------EKRILAVVDKARDLNIPIRIGVNAGSLEKDLQTKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K DF NF S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEILDKYDFQNFKVSVKASDVFMAVAAYRKLATQI-----EQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRVSLAADPVEEV 248
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ +++L+ ++R+ +++CPSC R
Sbjct: 218 VKSSVGLGMLLMDGIGDTIRVSLAADPVEEVK-VGWDILKSLKLRSKGINFIACPSCSRQ 276
Query: 652 LFD----LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
FD + E+ + + T+ L +A++GC+VNGPGE + D G GG P + +YV
Sbjct: 277 NFDVIKTMNELEMRLEDITTPL---DVAVIGCVVNGPGEAKEVDVGLAGGTPKNL-VYV- 331
Query: 708 KTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE 741
V + E D+L QLI+ AE A+E
Sbjct: 332 NGVPSQKFEQENLVDSLEQLIRKQA--AEKEAKE 363
>gi|110834721|ref|YP_693580.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax borkumensis SK2]
gi|123149357|sp|Q0VNE0.1|ISPG_ALCBS RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|110647832|emb|CAL17308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax borkumensis SK2]
Length = 372
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR VMVGNV +G + PI VQ+MT ++T DV TV ++ R+ D G D+VR++V
Sbjct: 6 KIERRKTRQVMVGNVPVGGDAPISVQSMTNSETCDVDATVGQIRRLQDAGVDIVRVSVPS 65
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFE 200
A+A +I+ K ++PLVADIH+ +AL VAE D +R+NPGN
Sbjct: 66 MEAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGNIGR------ 114
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
E+ +++ K G +RIG N GSL + YG+ + +V
Sbjct: 115 ----------------EDRIKAVIQCAKDKGLPIRIGVNAGSLEKELQRKYGEPTSDALV 158
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A I + DF NF S+KASN + +QAYR L +++ + PLHLGVTEAG
Sbjct: 159 ESALRHADILDRYDFQNFKVSVKASNVFMTLQAYRKLSSQL-----EQPLHLGVTEAGTF 213
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ +G LL +G+GDTIRVSL P +E+
Sbjct: 214 RSGTVKSAVALGALLMEGIGDTIRVSLAADPVEEV 248
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+QA R+L L E L+ V F +G + + +GALL++G+GD + +
Sbjct: 189 LQAYRKLSSQL-EQPLHLGVTEAGTFRSG------TVKSAVALGALLMEGIGDTIRVSLA 241
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSI 674
+ +R F++L+ +R ++CPSC R FD+ + E+ + + V +
Sbjct: 242 ADPVEEVR-VGFDILKSLNLRKKGVNIIACPSCSRQNFDVIKTVNELEARLEDINESVDL 300
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKI 702
A++GC+VNGPGE + D G GG P +
Sbjct: 301 AVIGCLVNGPGEAREVDVGLTGGTPNNL 328
>gi|403384139|ref|ZP_10926196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kurthia sp.
JC30]
Length = 369
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +
Sbjct: 5 THRSKTRPVRVGDLTIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLVADIHF +AL+ E DKIR+NPGN R+ + E
Sbjct: 65 RAANALADIK-----KRIHIPLVADIHFDYKLALKAIEAGVDKIRINPGNIG-RKEKVEA 118
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ V K G +RIG N GSL +I+ YG + GMVE
Sbjct: 119 V---------------------VNAAKAKGVPIRIGVNAGSLERKILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 SGTIKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 IKSAAGLGAILSKGIGNTLRISLSADPVEEIK-VARELLKTFGLASNIPTLISCPTCGRI 274
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GK 708
DL I+ E+ E +T P + ++++GC VNGPGE +AD G + GA G+ L+ GK
Sbjct: 275 EIDLISIANEVEEYLQTIKAP-IKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGK 332
Query: 709 TVVK 712
TV K
Sbjct: 333 TVRK 336
>gi|366166643|ref|ZP_09466398.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acetivibrio
cellulolyticus CD2]
Length = 354
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 170/295 (57%), Gaps = 38/295 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT+ + +G+ IG + PI VQ+MT DT++ TV ++ R+ D+G +VR+ V
Sbjct: 8 RKKTKKIRIGDTFIGGDSPITVQSMTNTDTRNALATVNQIKRLEDEGCSIVRVAVPDNEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A +IK S+ +IPLVADIHF +A+ + DKIR+NPGN D+
Sbjct: 68 AEAIRDIKKSI-----HIPLVADIHFDYRLAIACMKNGADKIRLNPGNIGDK-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +VE K+ +RIG N GSL +M+ +G +P MVESA
Sbjct: 115 --------------DRVRMVVEVAKERQIPIRIGVNSGSLEKDVMAKFGGVTPEAMVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI +L+F++ +FS+KASN + + AYR++ + DYPLH+GVTEAG G
Sbjct: 161 LGHARILEELNFYDIVFSLKASNVPMTIAAYRMMSEK-----TDYPLHIGVTEAGTIYKG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPF 377
+KS++G+G LL +G+GDTIRVSLT P +EI + N +++ L++G F
Sbjct: 216 TVKSSVGLGCLLAEGIGDTIRVSLTGDPVEEI----KAGNEILKSLGLKKGGVEF 266
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + G + ++ +L+ ++ E++SCP+CGR
Sbjct: 217 VKSSVGLGCLLAEGIGDTIRVSLTGDPVEEIK-AGNEILKSLGLKKGGVEFISCPTCGRC 275
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ I E+ S + + +A+MGC VNGPGE +AD G GG G++ L+ +
Sbjct: 276 QVDLISIAGRIEERLSKVDKDIKVAVMGCAVNGPGEAKEADIGIAGG-KGEVLLFKKGEI 334
Query: 711 VKRGIAMEQATDALIQLI 728
+++ I E+A + ++ I
Sbjct: 335 IRK-IPQERAVEEFLEEI 351
>gi|330830068|ref|YP_004393020.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii B565]
gi|406676652|ref|ZP_11083837.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC35]
gi|423209228|ref|ZP_17195782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER397]
gi|328805204|gb|AEB50403.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii B565]
gi|404617086|gb|EKB14022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER397]
gi|404624966|gb|EKB21783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC35]
Length = 371
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 156/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA T+E++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATIEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A L++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKLQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVDYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 219 VKSAIGLGMLLTDGIGDTLRISLAADPVEEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 277
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++I+GC+VNGPGE +D G + GA K Y G
Sbjct: 278 EFDVIATVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLG-LAGAANKSAFYEGGQR 336
Query: 711 VKR 713
V R
Sbjct: 337 VDR 339
>gi|414071207|ref|ZP_11407180.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. Bsw20308]
gi|410806385|gb|EKS12378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. Bsw20308]
Length = 372
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 ADAFKSIKAQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYI 331
>gi|407647350|ref|YP_006811109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
brasiliensis ATCC 700358]
gi|407310234|gb|AFU04135.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
brasiliensis ATCC 700358]
Length = 385
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 174/329 (52%), Gaps = 44/329 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLMVGNVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGN----------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRA---VRIGTNHGSLSDRIMSYYGD-SPRGM 258
I+E + E K G A +RIG N GSL R++ YG +P +
Sbjct: 123 -------------IKEFDGRVGEVAKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEAL 169
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
VESA A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 170 VESALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----SDYPLHLGVTEAGP 224
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPF 377
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 225 AFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGGQILQSLNLRPRKLE--IVSC 282
Query: 378 EEKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 283 PSCGRAQVDVYTLANEVSAGLEGMEVPLR 311
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 237 GALLSEGIGDTIRVSLSAPPAEEIK-VGGQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 295
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ ++ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 296 ANEV---SAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT- 350
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 351 VPEAQIVETLIE 362
>gi|262066964|ref|ZP_06026576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum ATCC 33693]
gi|291379312|gb|EFE86830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum ATCC 33693]
Length = 348
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ V VGN++IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ + A+A
Sbjct: 2 TKVVKVGNLSIGGNNPIIIQSMTNTNSADVEATVMQINELEKAGCQLVRMTINNIKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
D +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 DNVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VRLLEKFNFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGSTLRVSLTENPVEEIKVAKEI 244
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+G L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 208 VKSAIGIGALLVDGIGSTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 263
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 264 GRTEIDLIGLAKQVEEEFQNEKNKFKIAVMGCVVNGPGEAREADYGIAAG 313
>gi|54026089|ref|YP_120331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
farcinica IFM 10152]
gi|73621100|sp|Q5YS74.1|ISPG_NOCFA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|54017597|dbj|BAD58967.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardia farcinica IFM 10152]
Length = 385
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 174/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+MTT T DV T++++ ++ G D+VR+ + +
Sbjct: 20 RRKTRQLMVGSVGVGSDHPVSVQSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+ +
Sbjct: 228 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLE--IVSCPSC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 286 GRAQVDVYTLANEVTAGLEGMEVPLR 311
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 237 GALLSEGIGDTIRVSLSAPPVEEVK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 295
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 296 ANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGQVIKT- 350
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 351 VPEHQIVETLIE 362
>gi|312621983|ref|YP_004023596.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202450|gb|ADQ45777.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 162/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ + +GN+ IG PIR+Q+MT TKDV TVE+++ + G D++R+ V A A
Sbjct: 3 TKKIKIGNLYIGGGEPIRIQSMTNTKTKDVEATVEQILSLESLGCDIIRVAVPDLDSAKA 62
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN D R E
Sbjct: 63 ISKIKSRI-----HIPLVADIHFDYKLALEAIYNGADKIRINPGNIGDERKVQE------ 111
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
+ ++ K+YG AVR+G N GSL D + Y P +VE+A
Sbjct: 112 ----------------IAKEAKRYGIAVRVGANSGSLPKDILQKYKSPVPEAIVEAAIYQ 155
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K DF N + S+K+SN + +++Y E+ +YPLH+G+TEAG G +K
Sbjct: 156 VKLLEKFDFDNIVVSVKSSNVLTTIRSY-----EILSQNLNYPLHVGLTEAGTFVAGTVK 210
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ L++GV
Sbjct: 211 SSIAIGYLLMKGIGDTIRVSLTDSPEKEVIVAKEI----LKSLNLRKGV 255
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQ 617
R +E LS+N LN+P+ H+ + + +G LL+ G+GD + L ++P +
Sbjct: 181 RSYEILSQN-LNYPL--HVGLTEAGTFVAGTVKSSIAIGYLLMKGIGDTIRVSLTDSPEK 237
Query: 618 DFDFLRDT--SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSI 674
+ ++ S NL +G ++ VSCP+C R DL +I+ E+ ++ +L +++
Sbjct: 238 EVIVAKEILKSLNLRKGVKI-------VSCPTCARCNVDLLKIADEVEKRLQNLDLDITV 290
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
AIMGC VNGPGE +AD G G + GK + R + + D L++ I
Sbjct: 291 AIMGCAVNGPGEAKEADVGVACGVGEGLLFKKGKIL--RKVKENEIVDELVKEI 342
>gi|146308515|ref|YP_001188980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina ymp]
gi|421505102|ref|ZP_15952042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina DLHK]
gi|166217123|sp|A4XY32.1|ISPG_PSEMY RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|145576716|gb|ABP86248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina ymp]
gi|400344325|gb|EJO92695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina DLHK]
Length = 370
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 160/281 (56%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCESPIK--RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGRIK-----QQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPAALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELESRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L +LI+
Sbjct: 337 SK--LTNENLVDELEKLIR 353
>gi|403508255|ref|YP_006639893.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardiopsis
alba ATCC BAA-2165]
gi|402801009|gb|AFR08419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardiopsis
alba ATCC BAA-2165]
Length = 384
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +G + P+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 18 RRKTRQIMVGNVPVGGDAPVSVQSMTTTRTSDINATLQQIAELTATGCQIVRVAVPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P E +RVNPGN
Sbjct: 78 ADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + + + G +RIG N GSL R+++ YG +P +VESA
Sbjct: 121 ---------IKKFDDKVAEIAKAAGEAGTPIRIGVNAGSLDKRLLAKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + F + S+K ++PVVMV AYRLL DYPLHLGVTEAG G
Sbjct: 172 LWECSLFEEHGFRDIKISVKHNDPVVMVNAYRLLS-----QACDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS++ G LL +G+GDTIRVSL+ PP +E+ + L +LGMR L+ P
Sbjct: 227 TIKSSVAFGALLSEGIGDTIRVSLSAPPAEEVKVGAQILESLGMRERGLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 RAQVDVYTLAEEVTAGLEGLEVPLR 309
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 599 GALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
GALL +G+GD + L P ++ +L+ MR E VSCPSCGR D+
Sbjct: 235 GALLSEGIGDTIRVSLSAPPAEEVKV----GAQILESLGMRERGLEIVSCPSCGRAQVDV 290
Query: 656 QEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
++ E+ T+ L G+ + A+MGC+VNGPGE DAD G G GK ++V V+
Sbjct: 291 YTLAEEV---TAGLEGLEVPLRVAVMGCVVNGPGEARDADLGVASGN-GKGQIFVKGEVI 346
Query: 712 K 712
K
Sbjct: 347 K 347
>gi|237734410|ref|ZP_04564891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mollicutes
bacterium D7]
gi|229382640|gb|EEO32731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. D7]
Length = 354
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 6 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 66 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 117 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 158
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +DYPLH+GVTEAG G
Sbjct: 159 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-----ASETFDYPLHIGVTEAGTKLGG 213
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS++GIGT+L G+G+TIRVSL++ P +EI + L
Sbjct: 214 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVAKIL 251
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ ++P+ HI + I + +G +L G+G+ + + + ++
Sbjct: 191 LASETFDYPL--HIGVTEAGTKLGGTIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVA 248
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGP 684
LL+ + + VSCP+CGR +DL ++ EI + + + +++AIMGC VNGP
Sbjct: 249 KI-LLKELELIDNVPTLVSCPTCGRIQYDLIPVAQEIEDFLNTINANITVAIMGCAVNGP 307
Query: 685 GEMADADFGYVGG 697
GE AD G GG
Sbjct: 308 GEAKHADIGIAGG 320
>gi|170723486|ref|YP_001751174.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida W619]
gi|229485855|sp|B1JDV8.1|ISPG_PSEPW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|169761489|gb|ACA74805.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida W619]
Length = 369
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVGQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|388257759|ref|ZP_10134938.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
sp. BR]
gi|387938926|gb|EIK45478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
sp. BR]
Length = 359
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 151/265 (56%), Gaps = 34/265 (12%)
Query: 92 MVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEI 151
MVGNVA+G + PI VQ+MT +T DVA TVE++ RI GAD+VR++V A+A I
Sbjct: 1 MVGNVAVGGDAPISVQSMTNTETTDVAATVEQIRRIQAAGADIVRVSVPTMDAAEAFGAI 60
Query: 152 KNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQ 210
+ K IPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 61 R-----KQVTIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR---------------- 99
Query: 211 KELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARIC 269
E+ +V+K + +RIG N GSL + YG+ +P +VESA I
Sbjct: 100 ------EKRIKAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESALRHVEIL 153
Query: 270 RKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIG 329
+L+F+NF S+KAS+ + V AYR L + D PLHLG+TEAG G +KS+IG
Sbjct: 154 DQLNFYNFKVSVKASDVFMAVAAYRKLATLI-----DQPLHLGITEAGGLRSGTVKSSIG 208
Query: 330 IGTLLQDGLGDTIRVSLTEPPEKEI 354
+G LL DG+GDTIRVSL P +EI
Sbjct: 209 LGALLMDGIGDTIRVSLAADPVEEI 233
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+GALL+DG+GD + + + ++ +++L+ ++R+ +++CPSC R FD+ +
Sbjct: 209 LGALLMDGIGDTIRVSLAADPVEEIK-VGWDMLRSLKIRSKGVNFIACPSCSRQNFDVIK 267
Query: 658 ISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
++ ++ + + +A++GC+VNGPGE +AD G GG P + +Y+
Sbjct: 268 TMNDLEQRVEDITVPLDVAVIGCVVNGPGEAKEADLGLAGGTPSNL-IYI 316
>gi|380293401|gb|AFD50348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Mentha sp. MC-2012]
Length = 104
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/104 (88%), Positives = 101/104 (97%)
Query: 393 QLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDS 452
QLP+QKEGEEVDYRGVLHRDGSVL+SV+LDQLKAPELLYKSLAAKL+VGMPFKDLATVDS
Sbjct: 1 QLPVQKEGEEVDYRGVLHRDGSVLISVTLDQLKAPELLYKSLAAKLIVGMPFKDLATVDS 60
Query: 453 ILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAM 496
IL+RELP DD +ARLALKRL+DISMGVITPLSEQLTKPLP+A+
Sbjct: 61 ILVRELPPQDDKNARLALKRLIDISMGVITPLSEQLTKPLPNAL 104
>gi|342732400|ref|YP_004771239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|417962474|ref|ZP_12604675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-3]
gi|417967100|ref|ZP_12608290.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-5]
gi|417968395|ref|ZP_12609420.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-co]
gi|418016187|ref|ZP_12655752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372667|ref|ZP_12964759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329855|dbj|BAK56497.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506522|gb|EGX28816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|380337562|gb|EIA26599.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-3]
gi|380338064|gb|EIA27008.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-5]
gi|380339759|gb|EIA28441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-co]
gi|380342336|gb|EIA30781.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 349
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 157/274 (57%), Gaps = 34/274 (12%)
Query: 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
+ V +GNV IG +PI +Q+MT +TKDV T+ ++ + +G ++VRI + +E D
Sbjct: 7 KEVRIGNVMIGGCNPIAIQSMTNTNTKDVNATINQINVLEKEGCNIVRIAITDNQEVDCI 66
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTDD 207
+IK KN NIPLVADI F +AL + DK+R+NPGN +
Sbjct: 67 SKIK-----KNTNIPLVADIQFDYRIALACIKNGIDKVRINPGNIGN------------- 108
Query: 208 EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFA 266
E+ +V C++YG +RIG N GSL I+S YG + +VESA +
Sbjct: 109 ---------EDKIREVVNACEEYGVPIRIGVNGGSLQKDILSRYGKKTTDALVESALKNV 159
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
+ K F N + S+K+S+ +M+++Y+ + + + DYPLHLGVTEAG G +KS
Sbjct: 160 DLLEKFGFRNIVISVKSSDVEMMIESYKKISSAV-----DYPLHLGVTEAGLFLSGAVKS 214
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+IGIGTLL +G+GDTIRVSLT+ P E+ + +
Sbjct: 215 SIGIGTLLHNGIGDTIRVSLTDDPVNEVKVSKEI 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + + ++ S +L+ + N +SCP+C RT F+L +
Sbjct: 218 IGTLLHNGIGDTIRVSLTDDPVNEVK-VSKEILKSLNIYNKGVNLISCPTCSRTKFNLID 276
Query: 658 ISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
++ ++ + T + ++IA+MGC VNGPGE +AD G GG
Sbjct: 277 LANKVEQLTKDIDKNITIAVMGCAVNGPGEAREADIGVAGG 317
>gi|163839397|ref|YP_001623802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Renibacterium
salmoninarum ATCC 33209]
gi|189045793|sp|A9WR14.1|ISPG_RENSM RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|162952873|gb|ABY22388.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Renibacterium salmoninarum ATCC 33209]
Length = 391
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI +Q+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISLQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+M YG +P +VESA
Sbjct: 124 KFDDQIKE-----------IAQAAKDHGTSIRIGVNAGSLDPRLMEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL +PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-----GAWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSKGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ E+ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEEV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 344 GEVIKT-VPESQIVETLIE 361
>gi|319651569|ref|ZP_08005696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
2_A_57_CT2]
gi|317396636|gb|EFV77347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
2_A_57_CT2]
Length = 373
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG + IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGPLTIGGSNELFIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK + NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIADIK-----RQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKVFGLSSNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEDYIQKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGQI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|386759103|ref|YP_006232319.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
JS]
gi|384932385|gb|AFI29063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
JS]
Length = 390
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 160/298 (53%), Gaps = 37/298 (12%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E + + R + E H+T KTR V VG + IG + + +Q+MTT T DV TV E+
Sbjct: 5 EAATTIKERLQVSEITHRT---KTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEI 61
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183
R+A+ G +VR+ +R A+A +IK K IPLV DIHF +AL+ E D
Sbjct: 62 NRLAEAGCQIVRVACPDERAANAIADIK-----KRITIPLVVDIHFDYKLALKAIEGGAD 116
Query: 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243
KIR+NPGN R E +V+ K G +RIG N GSL
Sbjct: 117 KIRINPGNIGRR----------------------EKVEAVVKAAKDKGIPIRIGVNAGSL 154
Query: 244 SDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
RI+ YG + GMVESA +I LDFH+ + SMKAS+ + ++AY E
Sbjct: 155 EKRILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAA 209
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+DYPLHLG+TE+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 KAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 267
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 231 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 289
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 290 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 348
Query: 711 VKR 713
V++
Sbjct: 349 VRK 351
>gi|406997773|gb|EKE15792.1| hypothetical protein ACD_11C00105G0017 [uncultured bacterium]
Length = 352
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 155/271 (57%), Gaps = 33/271 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+ V VGN+++G +P+RVQ+M DT+DV+ TV++++ + G ++VR+ V A A
Sbjct: 7 SSVVKVGNLSLGGNNPVRVQSMCNTDTRDVSATVKQILELEKAGCEIVRVAVLDMVAAKA 66
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IKN + +IPLVADIHF +AL + + DKIR+NPGN
Sbjct: 67 IGKIKNKI-----HIPLVADIHFDYKLALEAINQGVDKIRINPGNIGS------------ 109
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266
EE +V+ CKK +RIG N GSL +++ YG +P+ V SA
Sbjct: 110 ----------EEKIKAVVDACKKKKIPIRIGVNVGSLEQDLLNKYGATPKAAVASAMRHI 159
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
+I KL+F + L S+K S+ M++AY++L ++ +YPLHLGVTEAG G +K+
Sbjct: 160 KILEKLNFKDILISIKFSSVPPMIEAYQMLAKKV-----NYPLHLGVTEAGTAFMGSIKN 214
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AIG+G LL G+G TIR SLT P +E+ C
Sbjct: 215 AIGMGVLLHQGIGATIRASLTADPIEEMKTC 245
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL G+G + + ++ T + +LQ +R E +SCP+CGRT +L +
Sbjct: 218 MGVLLHQGIGATIRASLTADPIEEMK-TCWAILQALDIRRRGPELISCPTCGRTQINLIK 276
Query: 658 ISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
++ ++ + + +LP + +A+MGC+VNGPGE +AD G GG G ++V V+K
Sbjct: 277 LAEDVEKVLEKINLP-IKVAVMGCVVNGPGEAREADIGVAGG-KGMGAIFVKGKVIK 331
>gi|167755663|ref|ZP_02427790.1| hypothetical protein CLORAM_01178 [Clostridium ramosum DSM 1402]
gi|374624955|ref|ZP_09697372.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 8_2_54BFAA]
gi|167704602|gb|EDS19181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
ramosum DSM 1402]
gi|373916238|gb|EHQ47986.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 8_2_54BFAA]
Length = 351
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 3 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 63 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 114 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +DYPLH+GVTEAG G
Sbjct: 156 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-----ASETFDYPLHIGVTEAGTKLGG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS++GIGT+L G+G+TIRVSL++ P +EI + L
Sbjct: 211 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVAKIL 248
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ ++P+ HI + I + +G +L G+G+ + + + ++
Sbjct: 188 LASETFDYPL--HIGVTEAGTKLGGTIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVA 245
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGP 684
LL+ + + VSCP+CGR +DL ++ EI + + + +++AIMGC VNGP
Sbjct: 246 KI-LLKELELIDNVPTLVSCPTCGRIQYDLIPVAQEIEDFLNTINANITVAIMGCAVNGP 304
Query: 685 GEMADADFGYVGG 697
GE AD G GG
Sbjct: 305 GEAKHADIGIAGG 317
>gi|164687914|ref|ZP_02211942.1| hypothetical protein CLOBAR_01559 [Clostridium bartlettii DSM
16795]
gi|164602327|gb|EDQ95792.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
bartlettii DSM 16795]
Length = 354
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VG+V IG +PI VQ+MT DT+DV TV ++ R+ + G D+VR+ V +
Sbjct: 5 RKMTREVRVGDVKIGGNNPISVQSMTNTDTRDVEKTVAQIKRLEEVGCDIVRVAVV---D 61
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
DA I S +++ NIP++ADIHF +AL + + D IR+NPGN
Sbjct: 62 MDAAKSI--SKIKEQVNIPIIADIHFDYRLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KAVVEKCKERDLKIRIGVNGGSLEKELLKKYGSPTAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V+AY L+ ++ DYPLH+G+TEAG G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYTAVEAYELMSQKV-----DYPLHIGITEAGGVRAG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIG+LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGIGSLLLKGIGDTMRISLTGDPVEEV 244
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
++IL+D+D I+ L ++ + A +E +S+ +++P+ I G+
Sbjct: 161 IKILEDLDFHNIVISLKSSD-----IYTAVEAYELMSQK-VDYPLHIGITEAGGVRAG-- 212
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
I + +G+LL+ G+GD + + G + ++ ++L+ + N K + VSCP+CGR
Sbjct: 213 TIKSSIGIGSLLLKGIGDTMRISLTGDPVEEVK-VGKDILRSLNLLNDKIKIVSCPTCGR 271
Query: 651 TLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ K L +++AIMGC+VNGPGE +AD G GG
Sbjct: 272 CNIDLINIANEVENKIQDLDKNMTVAIMGCVVNGPGEAREADIGIAGG 319
>gi|402776769|ref|YP_006630713.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis QB928]
gi|402481949|gb|AFQ58458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus subtilis QB928]
Length = 390
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 161/298 (54%), Gaps = 37/298 (12%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E + + R + E H+T KTR V VG + IG + + +Q+MTT T DV TV E+
Sbjct: 5 EAATTIKERLQVSEITHRT---KTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEI 61
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183
R+A+ G +VR+ +R A+A +IK K +IPLV DIHF +AL+ E D
Sbjct: 62 NRLAEAGCQIVRVACPDERAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGAD 116
Query: 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243
KIR+NPGN R E +V+ K G +RIG N GSL
Sbjct: 117 KIRINPGNIGRR----------------------EKVEAVVKAAKDKGIPIRIGVNAGSL 154
Query: 244 SDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
RI+ YG + GMVESA +I LDFH+ + SMKAS+ + ++AY E
Sbjct: 155 EKRILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAA 209
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+DYPLHLG+TE+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 KAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 267
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 231 VKSAAGLGAILSKGIGNTMRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 289
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 290 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 348
Query: 711 VKR 713
V++
Sbjct: 349 VRK 351
>gi|347753190|ref|YP_004860755.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
coagulans 36D1]
gi|347585708|gb|AEP01975.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
coagulans 36D1]
Length = 369
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 159/288 (55%), Gaps = 37/288 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGSNELFIQSMTTTKTHDVDATVRQIERLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
V +R A A +IK K +IPLVADIHF +AL E DKIR+NPGN R
Sbjct: 60 AVPDERAARAIPDIK-----KRIHIPLVADIHFDYRLALIAIEGGVDKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKPILQKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFHDIIVSMKASDVRLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
+G G +KSA GIGTLL G+G+T+R+SL+ P +E+ R L +
Sbjct: 208 SGTLFSGTIKSAAGIGTLLNMGIGNTLRISLSADPVEEVKVARELLKI 255
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ L + + ++ + LL+ + + VSCP+CGR
Sbjct: 216 IKSAAGIGTLLNMGIGNTLRISLSADPVEEVK-VARELLKIFGLSSNAPTLVSCPTCGRI 274
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
DL I+ E+ E +T P + ++++GC VNGPGE +AD G + GA G+ L+
Sbjct: 275 AIDLISIANEVEEYLQTIKAP-IKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGK 332
Query: 710 VVKR 713
++++
Sbjct: 333 IIRK 336
>gi|350266707|ref|YP_004878014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349599594|gb|AEP87382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 375
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVQAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTMRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|284030948|ref|YP_003380879.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kribbella
flavida DSM 17836]
gi|283810241|gb|ADB32080.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kribbella
flavida DSM 17836]
Length = 383
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +G + P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQIKVGKVLVGGDAPVSVQSMTTTLTSDVNSTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I ++ IP++ADIHF P E +RVNPGN +
Sbjct: 78 ADALPQIA-----QHSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAAAAKDHGTSIRIGVNAGSLDPRLLKKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVVMVKAYELLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS++ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSSVAFGALLSKGIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGMEVPLR 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 235 GALLSKGIGDTIRVSLSAPPVEEVK-VGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ ++ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 AEQV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPESQIVETLIE 360
>gi|365831282|ref|ZP_09372834.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 3_3_56FAA]
gi|365261759|gb|EHM91660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 3_3_56FAA]
Length = 347
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 167/292 (57%), Gaps = 38/292 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 3 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 63 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 114 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +DYPLH+GVTEAG G
Sbjct: 156 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-----ASETFDYPLHIGVTEAGTKLGG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
+KS++GIGT+L G+G+TIRVSL++ P +EI ++A + ++ EL V
Sbjct: 211 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEI----KVAKILLKELELIDNV 258
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L+ ++P+ HI + I + +G +L G+G+ + + + ++
Sbjct: 188 LASETFDYPL--HIGVTEAGTKLGGTIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVA 245
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGP 684
LL+ + + VSCP+CGR +DL ++ EI + + + +++AIMGC VNGP
Sbjct: 246 KI-LLKELELIDNVPTLVSCPTCGRIQYDLIPVAQEIEDFLNTINANITVAIMGCAVNGP 304
Query: 685 GEMADADFGYVGG 697
GE AD G GG
Sbjct: 305 GEAKHADIGIAGG 317
>gi|237741512|ref|ZP_04571993.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 4_1_13]
gi|229429160|gb|EEO39372.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 4_1_13]
Length = 354
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|374710856|ref|ZP_09715290.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Sporolactobacillus inulinus CASD]
Length = 365
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T+DVA TVE++ R+ + G LVR+
Sbjct: 5 THRTKTRKVKVGNLTIGGSNEVIIQSMTTTKTRDVASTVEQIHRLEEAGCQLVRVACPTM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A EIK K IPLV DIHF +AL+ E DKIR+NPGN
Sbjct: 65 EDALAIPEIK-----KQIKIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGK------- 112
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+E +V K+ +RIG N GSL I+ YG + GMVE
Sbjct: 113 ---------------QENVEAVVRAAKEKHIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + S+KASN + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSLKASNIHLAVEAY-----EKAARTFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G+T+R+SL+ P +E+ CR L
Sbjct: 213 SGTIKSAAGLGILLNKGIGNTMRISLSADPVEEVKVCREL 252
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K + A +E + ++P+ H+
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSL-KASNIHLAVEAYEK-AARTFDYPL--HLGITES 208
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTE 641
I + +G LL G+G+ + L P ++ R+ LL+ + N T
Sbjct: 209 GTLFSGTIKSAAGLGILLNKGIGNTMRISLSADPVEEVKVCRE----LLKSFGLTNAAT- 263
Query: 642 YVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
VSCP+CGR DL +++ E+ + S + + ++++GC VNGPGE +AD G GG
Sbjct: 264 LVSCPTCGRIQIDLIKVANEVEQYISKINAPIKVSVLGCAVNGPGEAREADIGIAGG 320
>gi|400131653|emb|CCH63729.1| XiaC protein [Streptomyces sp. HKI0576]
Length = 383
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 19 RRKTRQLQVGPVGVGSDHPVSVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN
Sbjct: 79 AEALPAIA-----RKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 121
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 122 ---------IKKFDDKVGEIARAAKDHGTPIRIGVNAGSLDARLMRKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH S+K ++PVVM++AY +L + DYPLHLGVTEAG G
Sbjct: 173 LWEASLFAEHDFHELKISVKHNDPVVMIRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TVKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ + + GALL G+GD + + +
Sbjct: 201 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTVKSAVAFGALLRQGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 258 EVK-VGAQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVVK 348
>gi|422339665|ref|ZP_16420623.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370808|gb|EHG18187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 357
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V ++ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVADLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|359768033|ref|ZP_09271813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans NBRC 16320]
gi|378717535|ref|YP_005282424.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans VH2]
gi|359314610|dbj|GAB24646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans NBRC 16320]
gi|375752238|gb|AFA73058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Gordonia
polyisoprenivorans VH2]
Length = 402
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ ++ G D+VR+ +
Sbjct: 34 RRKTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPRNED 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 94 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 137
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIMS YG +P +VES
Sbjct: 138 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMSKYGKATPEALVES 186
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 187 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 241
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ +
Sbjct: 242 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEVKVGDQILQSLNLRPRKLE--IVSCPSC 299
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + + EG EV R
Sbjct: 300 GRAQVDVYKLADAVTAGLEGMEVPLR 325
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 251 GALLSQGIGDTIRVSLSAPPAEEVKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 307
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ + T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 308 KLADAV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 363
>gi|339495154|ref|YP_004715447.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386021781|ref|YP_005939805.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri DSM 4166]
gi|327481753|gb|AEA85063.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri DSM 4166]
gi|338802526|gb|AEJ06358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 370
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG VA+G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGGVAVGGDAPISVQSMTNTETCDVEATVGQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QRVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P + GK
Sbjct: 277 NFDVVKTMNELETRVEDLLVPMDVAVIGCVVNGPGEAKEAHIGLTGGTPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|260905201|ref|ZP_05913523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium linens BL2]
Length = 382
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ P+ VQ+MTT T D+ GT++++ + G D+VR+ +
Sbjct: 19 RRKTRQIQVGKVGVGSDFPVSVQSMTTTQTTDINGTLQQIAELTAAGCDIVRVACPSPDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A ++ + IP++ADIHF P V + +RVNPGN +
Sbjct: 79 AAAL-----PVIAQKSQIPVIADIHFQPKYVYAAIDAGCGAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + G ++RIG N GSL RIM YG +P +VESA
Sbjct: 124 KFDDQVKQ-----------IAKAANDAGTSIRIGVNAGSLDKRIMEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-----GDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G+LL G+GDTIRVSL+ PP +EI
Sbjct: 228 TIKSATAFGSLLSQGIGDTIRVSLSAPPVEEI 259
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T G+LL G+GD + + +
Sbjct: 201 RAYELLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGSLLSQGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ ++ K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 258 EIK-VGNQILESLNLKPRKLEIVSCPSCGRAQVDVYTLADKV---TAGLEGMEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 348
>gi|340749921|ref|ZP_08686768.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
mortiferum ATCC 9817]
gi|229419564|gb|EEO34611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
mortiferum ATCC 9817]
Length = 355
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 152/275 (55%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+R V VGN+ IG +PI +Q+MT T DV TV ++ ++ G +VR+T+ + A A
Sbjct: 2 SRVVKVGNLLIGGGNPIVIQSMTNTTTSDVEATVNQIKKLEAAGCQMVRMTINNEEAAKA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K ++PL ADIHF +AL E DK+R+NPGN
Sbjct: 62 IGEIK-----KRVDVPLCADIHFDYKLALLAIENGIDKLRINPGNIGS------------ 104
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+E +VEK K+ +RIG N GS+ I+ YG + GMVESA
Sbjct: 105 ----------DENIKAVVEKAKEKNIPIRIGVNSGSIEKHILEKYGKPTADGMVESAMYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
+ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G +K
Sbjct: 155 INLLEKNGFNDIVVSLKASNVKMMVEAYRKISKLI-----DYPLHLGVTEAGTAFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+GDTIRVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGDTIRVSLTEDPVEEIKVAKEI 244
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+GD + L E P ++ ++ +L+ + E VSCP+C
Sbjct: 208 VKSAIGIGALLVDGIGDTIRVSLTEDPVEEIKVAKE----ILKVLGLIEAGVEIVSCPTC 263
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADF 692
GRT DL ++ ++ +E + + IA+MGCIVNGPGE +AD+
Sbjct: 264 GRTEIDLIGLAKKVEKEFENENRKIKIAVMGCIVNGPGEAREADY 308
>gi|408829170|ref|ZP_11214060.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
somaliensis DSM 40738]
Length = 384
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+ S+K ++PVVMV AYR L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFHDIKISVKHNDPVVMVNAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +E+ + L L +R L+ P
Sbjct: 227 TIKSAVAFGALLAEGIGDTIRVSLSAPPAEEVKVGIQILEALNLRQRRLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGMEVPLR 309
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 543 LHDLPFN---EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
HD+ + D + V A R+L E ++P+ H+ I + G
Sbjct: 183 FHDIKISVKHNDPVVMVNAYRQLAE-----QCDYPL--HLGVTEAGPAFQGTIKSAVAFG 235
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
ALL +G+GD + + + ++ +L+ +R + E VSCPSCGR D+ +++
Sbjct: 236 ALLAEGIGDTIRVSLSAPPAEEVK-VGIQILEALNLRQRRLEIVSCPSCGRAQVDVYKLA 294
Query: 660 AEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 295 DEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|336400419|ref|ZP_08581198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 21_1A]
gi|336162607|gb|EGN65571.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 21_1A]
Length = 354
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIIIQSMTNTNSADVESTVRQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AIYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL D +GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKEI 247
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALL+D +GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ +E + + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKKVEKEFENEKNKIKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|294501265|ref|YP_003564965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium QM B1551]
gi|295706612|ref|YP_003599687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium DSM 319]
gi|294351202|gb|ADE71531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium QM B1551]
gi|294804271|gb|ADF41337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium DSM 319]
Length = 370
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN RR
Sbjct: 60 ACPDERAADAIPEIK-----KRINIPLVVDIHFDYRLALKAIEGGADKIRINPGNIG-RR 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
+ E + V K +RIG N GSL RI+ YG +
Sbjct: 114 EKVEAV---------------------VNAAKAKNIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKAAQA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISTVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGEIVRK 336
>gi|441513539|ref|ZP_20995368.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amicalis NBRC 100051]
gi|441451648|dbj|GAC53329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amicalis NBRC 100051]
Length = 395
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNIKEFDGRVKEV 140
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E G +RIG N GSL RI+ YG +P +VES
Sbjct: 141 AKAAGEA---------------------GIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|409425605|ref|ZP_11260189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. HYS]
Length = 369
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQINRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 MRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|302558079|ref|ZP_07310421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
griseoflavus Tu4000]
gi|302475697|gb|EFL38790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
griseoflavus Tu4000]
Length = 385
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKTRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R L+ +
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEVKVGIQILESLNLRQRGLE--IVSCPSCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEVK-VGIQILESLNLRQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|254304072|ref|ZP_04971430.1| isoprenoid biosynthesis protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324264|gb|EDK89514.1| isoprenoid biosynthesis protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 357
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V ++ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVADLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETKKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|452856271|ref|YP_007497954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080531|emb|CCP22294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 375
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|154686768|ref|YP_001421929.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens FZB42]
gi|375363039|ref|YP_005131078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|385265503|ref|ZP_10043590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
5B6]
gi|394992094|ref|ZP_10384887.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
916]
gi|429505915|ref|YP_007187099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451346287|ref|YP_007444918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens IT-45]
gi|166216865|sp|A7Z6S2.1|ISPG_BACA2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|154352619|gb|ABS74698.1| IspG [Bacillus amyloliquefaciens FZB42]
gi|371569033|emb|CCF05883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|385149999|gb|EIF13936.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
5B6]
gi|393807110|gb|EJD68436.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
916]
gi|429487505|gb|AFZ91429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449850045|gb|AGF27037.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens IT-45]
Length = 375
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|443631801|ref|ZP_21115981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443347916|gb|ELS61973.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 376
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTMRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|296333335|ref|ZP_06875788.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675160|ref|YP_003866832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296149533|gb|EFG90429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413404|gb|ADM38523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 375
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVQAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|419718113|ref|ZP_14245449.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum F0468]
gi|383305714|gb|EIC97063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum F0468]
Length = 352
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 169/296 (57%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R KTR V +G+ IG+ +PI +Q+M T+DV TVE+++R+ D G D++R+ V
Sbjct: 1 MRNKTRLVQIGDKKIGAGNPILIQSMCNTKTEDVDATVEQILRLEDAGCDIIRVAVPSSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A +IK K +IPLVADIHF +AL + DKIR+NPGN +
Sbjct: 61 AALAIAKIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGSK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + +G+VES
Sbjct: 109 ---------------ERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAKGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ L+ E DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKE-----TDYPLHVGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ P
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKLILNNLGLRNGGIEVVSCP 264
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 537 IDATMILHDLPFNE----DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D I+ D+ +N K V + E +S+ ++P+ I + R +I
Sbjct: 155 LDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKET-DYPLHVGITESGTVKRG--MI 211
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+ +G +L G+GD + + G + + +L +RN E VSCP+CGRT
Sbjct: 212 KSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKL-ILNNLGLRNGGIEVVSCPTCGRTN 270
Query: 653 FDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 271 IDLIGLAGKVEKLVENYDLNIKVAVMGCVVNGPGEAKEAD 310
>gi|19703813|ref|NP_603375.1| GcpE protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296327834|ref|ZP_06870371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|22095779|sp|Q8RG40.1|ISPG_FUSNN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|19713961|gb|AAL94674.1| GcpE protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296155048|gb|EFG95828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 354
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVANLKIGGNNPIIIQSMTNTNSADVEATVKQINNLEKVGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PLVADIHF +AL + DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVSLPLVADIHFDYRLALLAIKNGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFDFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL +++ E R K + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFRTKKNKF---KIAVMGCVVNGPGEAREADYGIAAG 316
>gi|422317107|ref|ZP_16398473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum D10]
gi|404590212|gb|EKA92670.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum D10]
Length = 351
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR V VGN++IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ + A+A
Sbjct: 2 TRIVKVGNLSIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNVKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VRLLEKYNFFDIVISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+G L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 208 VKSAIGIGALLVDGIGATLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 263
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GRT DL ++ ++ E+ + +A+MGC+VNGPGE +AD+G G I +
Sbjct: 264 GRTEIDLIGLAKQVEEEFQNEKNKFKVAVMGCVVNGPGEAREADYGVAAGRG--IGILFK 321
Query: 708 KTVVKRGIAMEQATDALIQLIKD 730
K V + ++ E + L +LI +
Sbjct: 322 KGEVVKKVSEENLLEELKKLIAE 344
>gi|34763966|ref|ZP_00144859.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886257|gb|EAA23540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 354
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL + DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLSIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|421074514|ref|ZP_15535545.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans JBW45]
gi|392527385|gb|EIW50480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans JBW45]
Length = 359
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 185/369 (50%), Gaps = 61/369 (16%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG V +G PI VQ+MT T DVA TV ++M++ G D+VR+ V
Sbjct: 7 RRMTNPVYVGKVMVGGTAPISVQSMTNTKTDDVADTVAQIMQLGSAGCDIVRLAVPDMSA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + IPL+ADIHF +A+ E D +R+NPGN A
Sbjct: 67 ALAIKEIKSKV-----QIPLIADIHFDYRLAIAAMENGVDALRINPGNIA---------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVES 261
E H+ + +V++ KK +RIG N GSL I+ YG +P GMVES
Sbjct: 112 --------EANHV----AIIVKEAKKRSIPIRIGVNAGSLEKSILEKYGGHPTPAGMVES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL+F + S+KA++ + + AYRL+ + +YPLHLG+TEAG +
Sbjct: 160 AMQHIAILEKLEFRDIKVSLKANDVPMTINAYRLMSETV-----NYPLHLGITEAGTIKS 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA------------- 367
G +KSA+GIG LL G+GDTIRVSLT P +EI L +LG+R
Sbjct: 215 GMIKSAVGIGALLAQGIGDTIRVSLTGDPVEEIKAANEILKSLGLREYGPTLISCPTCGR 274
Query: 368 -----AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDY-------RGVLHRDGSV 415
AE+ + V + R F + E +E D +G++ R G +
Sbjct: 275 CNINLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGGKGQGLVFRKGEI 334
Query: 416 LMSVSLDQL 424
+ VS DQL
Sbjct: 335 VKRVSEDQL 343
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 18/197 (9%)
Query: 529 EELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
E+LE +DI ++ +D+P + A R + E +N+P+ H+
Sbjct: 168 EKLE-FRDIKVSLKANDVPMT------INAYRLMSE-----TVNYPL--HLGITEAGTIK 213
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+I + +GALL G+GD + + G + ++ + +L+ +R +SCP+C
Sbjct: 214 SGMIKSAVGIGALLAQGIGDTIRVSLTGDPVEEIKAAN-EILKSLGLREYGPTLISCPTC 272
Query: 649 GRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR +L EI+ ++ +K S + +A+MGC+VNGPGE +AD G GG G+ ++
Sbjct: 273 GRCNINLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGG-KGQGLVFRK 331
Query: 708 KTVVKRGIAMEQATDAL 724
+VKR ++ +Q AL
Sbjct: 332 GEIVKR-VSEDQLVTAL 347
>gi|160944141|ref|ZP_02091371.1| hypothetical protein FAEPRAM212_01643 [Faecalibacterium prausnitzii
M21/2]
gi|158444817|gb|EDP21821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii M21/2]
gi|295105057|emb|CBL02601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii SL3/3]
Length = 348
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 153/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+K R V +GNV IG +PI VQTM +D+ G V + R G ++R+T
Sbjct: 1 MRQKKREVKIGNVTIGGSNPIAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSPA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 61 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG +P MVES
Sbjct: 108 ---DDRVKA-----------VVDACQQKNIPIRIGVNGGSLEKHILARYGAPTPEAMVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 154 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 209 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 594 AGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+G +G +L++G+GD + L P ++ + FN+L+ T E ++CP+CGR
Sbjct: 213 SGMGIGGMLLEGIGDTIRVSLAAEPEKEVE----AGFNILRAVGFPVTGPEVITCPTCGR 268
Query: 651 TLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
T + EI+ E+ ++ + + +A+MGC+VNGPGE +AD G GG + GK
Sbjct: 269 TQYPCTEIANEVEKRLQGYKKSIKVAVMGCVVNGPGEAREADIGIAGGKGEAVLFIHGKP 328
Query: 710 VVK 712
+ K
Sbjct: 329 IKK 331
>gi|403668233|ref|ZP_10933509.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kurthia sp.
JC8E]
Length = 369
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +
Sbjct: 5 THRTKTRPVRVGDLTIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLVADIHF +AL+ + DKIR+NPGN +
Sbjct: 65 RAANALADIK-----KQIHIPLVADIHFDYKLALKAIDAGVDKIRINPGNIGRK------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKAKGVPIRIGVNAGSLERKILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 SGTIKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 IKSAAGLGAILSKGIGNTLRISLSADPVEEIK-VARELLKTFGLASNIPTLISCPTCGRI 274
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GK 708
DL I+ E+ + +T P + ++++GC VNGPGE +AD G + GA G+ L+ GK
Sbjct: 275 EIDLISIANEVEDYLQTIKAP-IKVSVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGK 332
Query: 709 TVVK 712
TV K
Sbjct: 333 TVRK 336
>gi|402297283|ref|ZP_10817056.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
alcalophilus ATCC 27647]
gi|401727440|gb|EJT00629.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
alcalophilus ATCC 27647]
Length = 367
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + +Q+MTT T DV TV E++R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNDEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK + NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIADIKARI-----NIPLVVDIHFDYKLALKAIESGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLERKIVEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVHLAIEAY-----EKAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTMRISLSADPVEEIKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVHLAIEAYEKAAQA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ + + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILNMGIGNTMRISLSADPVEEIK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKIKAPLKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L++ GKTV K
Sbjct: 327 LFMKGKTVRK 336
>gi|374702667|ref|ZP_09709537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. S9]
Length = 370
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ + GAD+VR++V
Sbjct: 9 RRLSRKIWVGSVPVGGDSPISVQSMTNTDTNDVAATVAQIRRLEEAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVNLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 MRHVEHLDRLNFPDFKVSVKASDVFMAVAAYRLLATKI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEI 248
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLADGIGDTIRISLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + ++ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNDLEGRLDDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLIYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIKD 730
K + E D L +LI++
Sbjct: 337 QK--LNNENLVDNLEKLIRE 354
>gi|384266118|ref|YP_005421825.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387899139|ref|YP_006329435.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens Y2]
gi|380499471|emb|CCG50509.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387173249|gb|AFJ62710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens Y2]
Length = 375
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|315123116|ref|YP_004065122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. SM9913]
gi|315016876|gb|ADT70213.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. SM9913]
Length = 372
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKD 730
K I D L ++D
Sbjct: 336 QKARIDNNNIVDQLEGYVRD 355
>gi|268315853|ref|YP_003289572.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Rhodothermus marinus DSM 4252]
gi|345302143|ref|YP_004824045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodothermus
marinus SG0.5JP17-172]
gi|262333387|gb|ACY47184.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Rhodothermus marinus DSM 4252]
gi|345111376|gb|AEN72208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodothermus
marinus SG0.5JP17-172]
Length = 371
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 158/278 (56%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R VMVGNV IG PI VQ+MTT T DV T+ ++ ++A+ GAD+VR+ V +
Sbjct: 5 RRWSRPVMVGNVQIGGGAPISVQSMTTTKTHDVEATLAQIRQLAEAGADIVRVAVPRPED 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I VQ + +P+VADIHF AL+ E K+R+NPGN
Sbjct: 65 AEALRDI----VQGS-PVPIVADIHFNYQYALKAIEAGVAKVRINPGNIGK--------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+E+++E+ + K+ G +RIG N GSL ++ YG P + ESA
Sbjct: 111 ---EEWEREV----------LLAAKEKGIPIRIGVNSGSLERDLLDKYGYPKPEALFESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ICRK F + + S+K S+ M+QAYRL+ D+PLHLGVTEAG G
Sbjct: 158 MRHVEICRKHGFEDIVISVKHSDVYYMIQAYRLIAERT-----DFPLHLGVTEAGSFVSG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG LL +G+GDTIRVSL P KE++ ++
Sbjct: 213 SIKSAIGIGALLAEGIGDTIRVSLATDPVKEVEVAHQI 250
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALL +G+GD + L P ++ + + +L+ R+ ++CP+C
Sbjct: 214 IKSAIGIGALLAEGIGDTIRVSLATDPVKEVE----VAHQILKALRLGPPGVNIIACPTC 269
Query: 649 GRT---LFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
GR LF + E E + +++A+MGC VNGPGE A AD G G G+ L+
Sbjct: 270 GRLTGDLFSIVEAVEEAVKARKFKKNLNVALMGCAVNGPGEAAGADLGISLGR-GRAHLF 328
Query: 706 VGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAE 740
+ VV R + +Q DA+++ I+ +W E P E
Sbjct: 329 IRGKVV-RVVPEDQIVDAVLEAIE---QWEEMPDE 359
>gi|119471075|ref|ZP_01613634.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alteromonadales bacterium TW-7]
gi|359447942|ref|ZP_09237500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20480]
gi|119445915|gb|EAW27196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alteromonadales bacterium TW-7]
gi|358046261|dbj|GAA73749.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20480]
Length = 372
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYI 331
>gi|392537190|ref|ZP_10284327.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas marina mano4]
Length = 372
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYI 331
>gi|375094100|ref|ZP_09740365.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora marina XMU15]
gi|374654833|gb|EHR49666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora marina XMU15]
Length = 380
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + +G +RIG N GSL R+++ YG +P + ESA
Sbjct: 121 ---------IKKFDDKVAEIARAASDHGTPIRIGVNAGSLDKRLLAKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+ S+K ++PVVM++AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHGFHDLKISVKHNDPVVMIRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLQGMEVPLR 309
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYELLAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGAQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLQGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ----LIKDHG 732
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ + ++ G
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPEHQIVETLIEEAMRIAEESG 370
Query: 733 RWAEP 737
EP
Sbjct: 371 ESGEP 375
>gi|383828492|ref|ZP_09983581.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora xinjiangensis XJ-54]
gi|383461145|gb|EID53235.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora xinjiangensis XJ-54]
Length = 383
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 172/328 (52%), Gaps = 42/328 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADINATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN---FADRRAQFE 200
A+A I IP++ADIHF P E +RVNPGN F DR A+
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGNIKKFDDRVAE-- 130
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
+ + K +G +RIG N GSL R++ YG +P +
Sbjct: 131 ----------------------IAKAAKDHGTPIRIGVNAGSLDPRLLKKYGKATPEALA 168
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG
Sbjct: 169 ESALWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPA 223
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFE 378
G +KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 224 FQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGDQILQSLNLRPRKLEIVSCP-- 281
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 282 SCGRAQVDVYKLADEVTAGLDGLEVPLR 309
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL--LLEAPGQD 618
R +E L+E ++P+ H+ I + GALL G+GD + L AP +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI---- 674
+ D +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ +
Sbjct: 257 EVKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLDGLEVPLRV 310
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 311 AVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|383819617|ref|ZP_09974886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
phlei RIVM601174]
gi|383336394|gb|EID14793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
phlei RIVM601174]
Length = 382
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV IGS+HPI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLMVGNVGIGSDHPIAVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 78 ADALAEIA-----RHSQIPVIADIHFQPKYIFAAIDAGC-AAVRVNPGNIKEFDGRVKEV 131
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
G +RIG N GSL R M YG +P +VES
Sbjct: 132 AKAA---------------------AAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K S+PVVMV AY EM DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHSDPVVMVAAY-----EMLAEKCDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEV 258
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSKGIGDTIRVSLSAPPAEEVK-VGNQILESLNLRPRGLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ + T+ L G+++ A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANAV---TAGLEGLNVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|386749721|ref|YP_006222928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 00-7128]
gi|384555964|gb|AFI04298.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 00-7128]
Length = 358
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +GNVAIG + PI VQ+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGNVAIGGDAPISVQSMTFSKTADIKSTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL +E D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIASESVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGATPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ DF NF S+KAS+ +QAYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDFDFTNFKISLKASDVERTMQAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 542 ILHDLPFNEDKIG-------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
+L D F KI R A R+ L +N+P H+ + I +
Sbjct: 161 LLEDFDFTNFKISLKASDVERTMQAYRMLRPL----VNYP--FHLGVTEAGNLFSSSIKS 214
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + + G+ + ++ L R++ +SCP+CGR +
Sbjct: 215 AMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRIEAN 273
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK + K
Sbjct: 274 LVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVIHK 332
>gi|443623736|ref|ZP_21108228.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Streptomyces viridochromogenes Tue57]
gi|443342734|gb|ELS56884.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Streptomyces viridochromogenes Tue57]
Length = 378
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L A+ DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 220 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 251
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + GALL G+GD + L P ++ +L+ ++ E VSCPSC
Sbjct: 221 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEVKV----GIQILESLNLKQRGLEIVSCPSC 276
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDL 704
GR D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK +
Sbjct: 277 GRAQVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQI 332
Query: 705 YVGKTVVK 712
+V V+K
Sbjct: 333 FVKGEVIK 340
>gi|392552321|ref|ZP_10299458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas spongiae UST010723-006]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK++ + VGNV IG PI VQ+MT +T DVA TV ++ I GAD+VR++V
Sbjct: 9 RRKSKRIYVGNVPIGDGAPIAVQSMTNTETTDVAATVAQINAIQAAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKEIKQQV-----DIPLVADIHFDYRIALKVAEYGADCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ ++ +RIG N GSL I YG+ +P ++ESA
Sbjct: 115 -------------EERIQAVVDAAREKNIPIRIGVNGGSLERDIQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I ++L+F NF S+KAS+ + V AYRLL E+ + PLHLG+TEAG G
Sbjct: 162 MRHVNILKRLNFDNFKVSVKASDVFLAVGAYRLLAKEI-----EQPLHLGITEAGGFRAG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + V+++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDVIEPVTVSVIGCVVNGPGEALVSDLG-LAGANKRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKDH 731
K I Q D L I+D+
Sbjct: 336 QKTRIDNTQIVDQLETQIRDY 356
>gi|87118477|ref|ZP_01074376.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
sp. MED121]
gi|86166111|gb|EAQ67377.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
sp. MED121]
Length = 370
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R +MVG+VA+G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRQSRQIMVGDVAVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + + PLVADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AEAFKKIRQEV-----STPLVADIHFDYKIALKVAEYGVDCLRINPGNIGSK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------ERIRSVVDAARHHGIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F +LDF F S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIGFFDELDFQEFKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTLRVSLAADPVQEI 248
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD L + ++ +++L+ ++RN +++CPSC R
Sbjct: 218 VKSSIGLGMLLMDGIGDTLRVSLAADPVQEIK-VGWDMLRSLKLRNRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
FD+ + ++ E+ + + +A++GCIVNGPGE +AD G GG P + GK
Sbjct: 277 NFDVIKTMNQLEERLEDIKVPLDVAVIGCIVNGPGEAKEADLGLAGGTPNNMVYEDGK 334
>gi|359420931|ref|ZP_09212862.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
araii NBRC 100433]
gi|358243204|dbj|GAB10931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
araii NBRC 100433]
Length = 376
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VGNV +GSE PI VQ+MTT T DV T++++ ++ G D+VR+ + +
Sbjct: 12 RRKTRQIRVGNVGVGSESPISVQSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A EI + NIP++ADIHF P A C +RVNPGN
Sbjct: 72 AEALPEIA-----RKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 116 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRMMEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA G LL +G+GDTIRVSL+ PP +EI
Sbjct: 220 GTIKSATAFGALLSEGIGDTIRVSLSAPPVEEI 252
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 14/141 (9%)
Query: 592 IGAGTNVGALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCG 649
I + T GALL +G+GD + L AP + + D +LQ +R K E VSCPSCG
Sbjct: 222 IKSATAFGALLSEGIGDTIRVSLSAPPVEEIKVGDA---ILQSLNLRPRKLEIVSCPSCG 278
Query: 650 RTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
R D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++
Sbjct: 279 RAQVDVYKLAEEV---TAGLDGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIF 334
Query: 706 VGKTVVKRGIAMEQATDALIQ 726
V V+K + Q + LI+
Sbjct: 335 VKGEVIKT-VPESQIVETLIE 354
>gi|374857395|dbj|BAL60248.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [uncultured
candidate division OP1 bacterium]
Length = 358
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 180/323 (55%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR ++ V VG + +G +PI VQ+MTT DT+DV TV ++ R+ G +LVR+ V
Sbjct: 7 RRVSKEVRVGPLKLGGTNPIVVQSMTTTDTRDVEATVRQIKRLEQAGCELVRVAVLNMDA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+ IK K +IPLVADIHF +AL+ + + DK+R+NPGN DR A+ EQ+
Sbjct: 67 ANQLAAIK-----KRISIPLVADIHFDHRLALKAIEQGVDKLRLNPGNITDR-AKIEQV- 119
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESA 262
V+ + G +RIG N GSL D ++ Y G +P MVE+A
Sbjct: 120 --------------------VKAARDKGIPIRIGVNSGSLPKDLLVKYEGATPEAMVEAA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +F + + S+K+++ VM+++YRL+ ++ YPLHLGVTEAG G+ G
Sbjct: 160 LREIEILEDNNFSDIVVSLKSTDVRVMIESYRLIAKQI-----KYPLHLGVTEAGLGDAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
++SA+GIGTLL++G+GDT+R SLT P +E+ LA L +R +Q P
Sbjct: 215 VVRSALGIGTLLEEGIGDTLRCSLTGDPVREVKVAYDILAALHIRWKGIQYTSCP--TCG 272
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D ++ + +QK E VD
Sbjct: 273 RIGIDLEKIVAE--VQKRLENVD 293
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E+EIL+D + + I+ L + ++ +++ R L + +P+ H+
Sbjct: 157 EAALREIEILEDNNFSDIVVSLKSTDVRV-MIESYR-----LIAKQIKYPL--HLGVTEA 208
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
D V+ + +G LL +G+GD L G ++ ++++L +R +Y S
Sbjct: 209 GLGDAGVVRSALGIGTLLEEGIGDTLRCSLTGDPVREVK-VAYDILAALHIRWKGIQYTS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL++I AE++++ ++ + I+++GC+VNGPGE ++ G VG
Sbjct: 268 CPTCGRIGIDLEKIVAEVQKRLENVDKPIKISLIGCVVNGPGEALHSNIGLVGHEKSG-T 326
Query: 704 LYVGKTVVKRGIAMEQATDALIQLIKDH 731
+YV KR + +Q D L+++ ++
Sbjct: 327 IYVDGKPYKR-VPEDQIVDELVKVAMEY 353
>gi|29828189|ref|NP_822823.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
avermitilis MA-4680]
gi|50400993|sp|Q82ML3.1|ISPG2_STRAW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
2; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 2
gi|29605291|dbj|BAC69358.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces avermitilis MA-4680]
Length = 385
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG +A+G P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRVSRQIQVGPLAVGGTAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP+VADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----AVIARKSQIPVVADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K++G +RIG N GSL R++ YG +P +VESA
Sbjct: 126 --DDKVKE-----------IARAAKEHGTPIRIGVNAGSLDRRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHDFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +LG+R L+ P
Sbjct: 228 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLGLRQRRLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLAEEVTAGLEGMEVPLR 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R + E VSCPSCGR
Sbjct: 229 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGIQILESLGLRQRRLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|452990821|emb|CCQ97942.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Clostridium ultunense Esp]
Length = 354
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 160/288 (55%), Gaps = 35/288 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR V VG V IG + + +Q+MTT DT+DV T+ ++ ++AD G +VR+ V +
Sbjct: 4 REETRPVYVGGVQIGGQSSVVIQSMTTTDTRDVKATLAQIEQLADAGCQIVRLAVVNQDA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ EIK K +P+VADIHF +AL+ E DKIR+NPGN +
Sbjct: 64 AEKLAEIK-----KGSPLPIVADIHFDYKLALKALESGVDKIRINPGNIGSK-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +VE CK+ G +RIG N GS+ R++ YG SP +VESA
Sbjct: 111 --------------EKTKAVVEACKERGVPIRIGVNSGSVEKRLLEKYGYPSPEAIVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I L F++ + S+K+S+ M++ Y L+ + +YPLH+GVTEAG G
Sbjct: 157 MNHVEILEDLGFYDIVVSLKSSDVPTMIKTYTLMAEK-----RNYPLHVGVTEAGTAYAG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAE 369
+KSA+GIGT+L G+GDTIRVSL P +EI + L +L + A E
Sbjct: 212 GIKSAVGIGTVLAMGIGDTIRVSLAADPLEEIKVAKNILKSLNLAATE 259
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L G+GD + + + ++ + N+L+ + T+ V+CP+CGRT
Sbjct: 213 IKSAVGIGTVLAMGIGDTIRVSLAADPLEEIK-VAKNILKSLNLAATEPVVVACPTCGRT 271
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
DL ++ + E T+ L + IA+MGC VNGPGE +AD G GG
Sbjct: 272 AIDLIGLATRVEEATAKLKKPLKIAVMGCAVNGPGEAREADIGIAGG 318
>gi|440695881|ref|ZP_20878394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
turgidiscabies Car8]
gi|440281953|gb|ELP69473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
turgidiscabies Car8]
Length = 378
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDQVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PV+MV AYR L A DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVIMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 220 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGNQILESLNLRQRGLEIVSCP--SCG 277
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 278 RAQVDVYKLAEEVTAGLEGMEVPLR 302
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 221 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGNQILESLNLRQRGLEIVSCPSCGRA 279
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 280 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 335
Query: 708 KTVVK 712
V+K
Sbjct: 336 GEVIK 340
>gi|126668580|ref|ZP_01739534.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. ELB17]
gi|126626985|gb|EAZ97628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. ELB17]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV T+ ++ + D GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVEATLGQIQALQDAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ +PLVADIHF +ALRVAE D IR+NPGN
Sbjct: 69 AEAFGRIR-----ARAGVPLVADIHFDYKIALRVAELGVDCIRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ S ++ C+ +RIG N GSLS + YG+ + +VESA
Sbjct: 115 -------------EDRISAVISACRDRNIPIRIGVNAGSLSKDLQRKYGEPNADALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF NF S+KAS + V+AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRNVDILDRHDFQNFKVSLKASEVFMTVEAYRKIATQI-----DQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVQEI 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + ++ +++L+ R+R+ +++CPSC R
Sbjct: 218 VKSSIGLGLLLMDGIGDTIRVSLAADPVQEIK-VGYDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + ++ + + + +A++GCIVNGPGE +AD G GG+P + GK
Sbjct: 277 NFDVIQTMNDLEVRLEDVKEALDVAVIGCIVNGPGEAKEADIGLTGGSPKNLFYMNGKP- 335
Query: 711 VKRGIAMEQATDALIQLIK 729
++ + TD L +LI+
Sbjct: 336 -QQKLDNANLTDDLERLIR 353
>gi|153872072|ref|ZP_02001070.1| IspG protein [Beggiatoa sp. PS]
gi|152071461|gb|EDN68929.1| IspG protein [Beggiatoa sp. PS]
Length = 362
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
+S K VRR +R + VGNVA+G PI VQ+MT DT DV TV ++ + + GAD+VR+
Sbjct: 2 QSEFKIVRRPSRQIYVGNVAVGGNAPISVQSMTNTDTCDVQSTVTQIKALQNAGADIVRV 61
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V + A+A +IK ++ ++PL+ADIHF +ALRVAE D +R+NPGN
Sbjct: 62 SVPTQEAAEAFGQIKAAV-----SVPLIADIHFDYRIALRVAELGVDCLRINPGNIGR-- 114
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +V+ + G ++RIG N GSL + YG+ +
Sbjct: 115 --------------------EDRVKSVVDSARDKGISIRIGVNAGSLEKELQKKYGEPTA 154
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL+F +F S+KAS + V AYR L ++ + PLHLG+TE
Sbjct: 155 DALVESALRHIDILDKLNFPDFKVSLKASEIFMTVAAYRKLATQI-----EQPLHLGITE 209
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KSAIG+G LL DG+GDTIRVSL P +EI
Sbjct: 210 AGGFRAGAVKSAIGLGMLLADGIGDTIRVSLAADPVEEI 248
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL DG+GD + + + ++ F++L+ +R ++CPSC R
Sbjct: 218 VKSAIGLGMLLADGIGDTIRVSLAADPVEEIK-VGFDILKSLHLRKKGINLIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + + +A++GC+VNGPGE +A G GG P + LY+G
Sbjct: 277 NFDVIKTVNELESRLEDIKEPLDVAVIGCVVNGPGEAREAHVGLTGGTPNNL-LYIGGKP 335
Query: 711 VKRGIAMEQATDALIQLIKDH 731
+ + E+ D L Q+I+ +
Sbjct: 336 DHK-VKNEELVDELEQVIRSY 355
>gi|291454464|ref|ZP_06593854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
albus J1074]
gi|359148644|ref|ZP_09181768.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. S4]
gi|421741564|ref|ZP_16179753.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces sp. SM8]
gi|291357413|gb|EFE84315.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
albus J1074]
gi|406690020|gb|EKC93852.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces sp. SM8]
Length = 384
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 154/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + E +P +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVREIAKAANETRTP-----------IRIGVNAGSLDKRLLQKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + FH+ S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFHDIKISVKHNDPVVMVNAYRQLAA-----ASDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEV 258
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + GALL +G+GD + L P ++ +L+ ++ + E VSCPSC
Sbjct: 228 IKSAVAFGALLSEGIGDTIRVSLSAPPAEEVKV----GLQILESLNLKPRRLEIVSCPSC 283
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDL 704
GR D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK +
Sbjct: 284 GRAQVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQI 339
Query: 705 YVGKTVVK 712
+V V+K
Sbjct: 340 FVKGEVIK 347
>gi|408528941|emb|CCK27115.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1
[Streptomyces davawensis JCM 4913]
Length = 385
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRQSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + GALL G+GD + L P ++ +L+ ++ E VSCPSC
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEVKV----GLQILESLNLKQRGLEIVSCPSC 283
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDL 704
GR D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK +
Sbjct: 284 GRAQVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQI 339
Query: 705 YVGKTVVK 712
+V V+K
Sbjct: 340 FVKGEVIK 347
>gi|383823892|ref|ZP_09979080.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
xenopi RIVM700367]
gi|383338328|gb|EID16693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
xenopi RIVM700367]
Length = 386
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 168/325 (51%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS++PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLMVGDVGVGSDYPISVQSMCTTKTHDVNATLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI ++ IP++ADIHF P E +RVNPGN + + ++
Sbjct: 78 ADALAEIA-----RHSQIPVIADIHFQPRYIFAAIEAGCAAVRVNPGNIKEFDGRVAEVA 132
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ G +RIG N GSL R + YG +P +VESA
Sbjct: 133 TAAGDA---------------------GIPIRIGVNAGSLDKRFLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F N S+K ++PVVMVQAY LL ++ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFGNIKISVKHTDPVVMVQAYELLASQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R L+ P
Sbjct: 227 TVKSAVAFGALLSKGIGDTIRVSLSAPPVEEVKVGNQILESLNLRPRSLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 RAQVDVYTLANEVSAGLEGLEVPLR 309
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSKGIGDTIRVSLSAPPVEEVK-VGNQILESLNLRPRSLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAM 717
+ E+ L + +A+MGC+VNGPGE +AD G G GK ++V V+K +
Sbjct: 294 ANEVSAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIKT-VPE 351
Query: 718 EQATDALIQ 726
Q + LI+
Sbjct: 352 SQIVETLIE 360
>gi|332534672|ref|ZP_08410503.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035884|gb|EGI72366.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKD 730
K I D L ++D
Sbjct: 336 QKARIDNNNIVDQLEGYVRD 355
>gi|359437408|ref|ZP_09227473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20311]
gi|359447499|ref|ZP_09237093.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20439]
gi|392555095|ref|ZP_10302232.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas undina NCIMB 2128]
gi|358027913|dbj|GAA63722.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20311]
gi|358038597|dbj|GAA73342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20439]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT D+ TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDIDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + VS++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPVSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKD 730
K I D L ++D
Sbjct: 336 QKARIDNNNIVDQLEGYVRD 355
>gi|398311451|ref|ZP_10514925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
mojavensis RO-H-1]
Length = 375
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGKIVRK 336
>gi|399544721|ref|YP_006558029.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. BSs20148]
gi|399160053|gb|AFP30616.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. BSs20148]
Length = 372
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV T+ ++ + D GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVEATLGQIQALQDAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ +PLVADIHF +ALRVAE D IR+NPGN
Sbjct: 69 AEAFGRIR-----ARAGVPLVADIHFDYKIALRVAELGVDCIRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ S ++ C+ +RIG N GSLS + YG+ + +VESA
Sbjct: 115 -------------EDRISAVISACRDRNIPIRIGVNAGSLSKDLQRKYGEPNADALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF NF S+KAS + V+AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRNVDILDRHDFQNFKVSLKASEVFMTVEAYRKIATQI-----DQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVQEI 248
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + ++ +++L+ R+R+ +++CPSC R
Sbjct: 218 VKSSIGLGLLLMDGIGDTIRVSLAADPVQEIK-VGYDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + ++ + + + +A++GCIVNGPGE +AD G GG+P + GK
Sbjct: 277 NFDVIKTMNDLEVRLEDVKEALDVAVIGCIVNGPGEAKEADIGLTGGSPKNLFYMNGKP- 335
Query: 711 VKRGIAMEQATDALIQLIK 729
++ + TD L +LI+
Sbjct: 336 -QQKLDNANLTDDLERLIR 353
>gi|359441760|ref|ZP_09231646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20429]
gi|358036262|dbj|GAA67895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20429]
Length = 372
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILNSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + +S++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPMSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKD 730
K I D L ++D
Sbjct: 336 QKARIDNNNIVDQLEGYVRD 355
>gi|421730975|ref|ZP_16170101.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407075129|gb|EKE48116.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 375
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV T+ E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATIAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGQIVRK 336
>gi|315651644|ref|ZP_07904655.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum DSM 3986]
gi|315486098|gb|EFU76469.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum DSM 3986]
Length = 352
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 170/296 (57%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG+ +PI +Q+M T+DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKKIGAGNPILIQSMCNTKTEDVDATVKQILRLEDAGCDIIRVAVPSSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A +IK K +IPLVADIHF +AL + DKIR+NPGN +
Sbjct: 61 AALAIAKIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGSK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + +G+VES
Sbjct: 109 ---------------ERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAKGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ L+ E DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKE-----TDYPLHVGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ P
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKLILNNLGLRNGGIEVVSCP 264
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 537 IDATMILHDLPFNE----DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D I+ D+ +N K V + E +S+ ++P+ I + R +I
Sbjct: 155 LDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKET-DYPLHVGITESGTVKRG--MI 211
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+ +G +L G+GD + + G + + +L +RN E VSCP+CGRT
Sbjct: 212 KSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKL-ILNNLGLRNGGIEVVSCPTCGRTN 270
Query: 653 FDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 271 IDLIGLAGKVEKLVENYDLNIKVAVMGCVVNGPGEAKEAD 310
>gi|421145791|ref|ZP_15605628.1| GcpE protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|395487805|gb|EJG08723.1| GcpE protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 354
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|288555778|ref|YP_003427713.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pseudofirmus OF4]
gi|288546938|gb|ADC50821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pseudofirmus OF4]
Length = 367
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + VQ+MTT T DV TV E+ R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNNEVVVQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK + +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIADIKAQI-----SIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTIKSAAGLGAILNMGIGNTVRISLSADPVEEVKVAREL 252
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 IKSAAGLGAILNMGIGNTVRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ + S + + +A++GC VNGPGE +AD G + GA G+ L++ +
Sbjct: 275 EIDLISIANEVEDYISTIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFMKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|375099461|ref|ZP_09745724.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora cyanea NA-134]
gi|374660193|gb|EHR60071.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora cyanea NA-134]
Length = 383
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 171/328 (52%), Gaps = 42/328 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN---FADRRAQFE 200
A+A I IP++ADIHF P E +RVNPGN F D+ A+
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIKKFDDKVAEIA 132
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
Q K +G +RIG N GSL R++ +G +P +
Sbjct: 133 Q------------------------AAKDHGTPIRIGVNAGSLDPRLLKKHGKATPEALA 168
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG
Sbjct: 169 ESALWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPA 223
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFE 378
G +KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 224 FQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLEIVSCP-- 281
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 282 SCGRAQVDVYKLADEVTAGLDGLEVPLR 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLDGLEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|429762658|ref|ZP_19295044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
hadrus DSM 3319]
gi|429181292|gb|EKY22464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
hadrus DSM 3319]
Length = 353
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR + +G+V IG +P+ +Q+MT T++V TV++++ + G ++R TV +
Sbjct: 4 RNQTRVISIGDVKIGGGNPVAIQSMTNTKTENVEETVKQILALEKAGCQIIRCTVPTMKA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 AEAFTEIK-----KQIHIPLVADIHFDYKLAIAAMEHGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVESA 262
EE +VE KKY +R+G N GSL ++ Y G + +G+VESA
Sbjct: 110 -------------EENIRKVVETAKKYHVPIRVGVNSGSLEKPLVKKYNGVTAQGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + K DFH+ + S+K+S+ ++ QAYRL+ ++ DYPLH+G+TEAG G
Sbjct: 157 LDKVAMLEKYDFHDMVVSIKSSDVLMCAQAYRLVADKI-----DYPLHVGITEAGTVFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+G+G +L G+GDTIRVSLT P EI + L LG+R+ ++
Sbjct: 212 NIKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASAKLILKTLGLRSGGIE 261
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L G+GD + + G + + +L+ +R+ E VSCP+CGRT
Sbjct: 213 IKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASAKL-ILKTLGLRSGGIEVVSCPTCGRT 271
Query: 652 LFDLQEISAEIREKTSHLPGVS--IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
DL ++ ++ + ++ +A+MGC+VNGPGE +AD G GG G+ L + K
Sbjct: 272 NIDLIPLANQVETMAADFENLNLKVAVMGCVVNGPGEAKEADVGIAGG-NGE-GLLIKKG 329
Query: 710 VVKRGIAMEQATDAL 724
V R + +Q D L
Sbjct: 330 EVIRKVPEDQLLDTL 344
>gi|359778894|ref|ZP_09282150.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
globiformis NBRC 12137]
gi|359303761|dbj|GAB15979.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
globiformis NBRC 12137]
Length = 388
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDFPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAKAAKDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PVVMV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVVMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 344 GEVIKT-VPESQIVETLIE 361
>gi|392535667|ref|ZP_10282804.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas arctica A 37-1-2]
Length = 372
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILNSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + +S++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPMSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKD 730
K I D L ++D
Sbjct: 336 QKARIDNNNIVDQLEGYVRD 355
>gi|88858480|ref|ZP_01133122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas tunicata D2]
gi|88820097|gb|EAR29910.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas tunicata D2]
Length = 372
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R + VGNV IG PI VQ+MT DT +V TV+++ I GAD+VR++V
Sbjct: 8 VRRKSRRIYVGNVPIGDGAPIAVQSMTNTDTLNVEATVKQIQAIQAAGADIVRVSVPTMD 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A +IK + +IPLVADIHF +AL+VAE D +R+NPGN
Sbjct: 68 AAEAFRKIKQQV-----DIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGS-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ ++ +RIG N GSL + YG+ +P ++ES
Sbjct: 115 --------------EDRIKAVVDAARERNIPIRIGVNGGSLERDLQEKYGEPTPEALLES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I ++L+F NF S+KAS+ + V AYRLL E+ D PLHLG+TEAG
Sbjct: 161 AMRHVNILQRLNFDNFKVSVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGFRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 216 GSVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + ++++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVATMNKLEERLEDIITPITVSVIGCVVNGPGEALVSDIG-LAGASRRSGLYINGER 335
Query: 711 VKRGIAMEQATDALIQLIKDH 731
K I + A + L Q ++++
Sbjct: 336 QKERIDNDNAAEQLEQKVREY 356
>gi|256844847|ref|ZP_05550305.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_36A2]
gi|256718406|gb|EEU31961.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_36A2]
Length = 354
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ E+ + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFETEKNKFKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|336435157|ref|ZP_08614874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 1_4_56FAA]
gi|336001548|gb|EGN31684.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 1_4_56FAA]
Length = 351
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 165/291 (56%), Gaps = 35/291 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ V +G+V IG HP+ +Q+MT T+DVA TVE+++R+ G ++VR TV
Sbjct: 2 LRTQTKEVKIGSVTIGGAHPVAIQSMTNTKTEDVAATVEQILRLEAAGCEIVRCTVPTME 61
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 62 AAKALKEIK-----KQIHIPLVADIHFDYKMAIAAIENGADKIRINPGNIGS-------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VEK K+YG +RIG N GSL ++ YG + G+VES
Sbjct: 109 --------------EERVRAVVEKAKEYGVPIRIGVNSGSLEKPLLEKYGGVTAEGIVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + + + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 155 ALDKVHMIESMGYDNLVVSIKSSDVLMCVKAHELIAKQ-----CPYPLHVGITESGTIYS 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LG+R ++
Sbjct: 210 GNIKSSVGLGIILHEGIGNTIRVSLTGDPVEEIRSAKLILKTLGLRKGGIE 260
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L +G+G+ + + G + +R +L+ +R E VSCP+CGRT
Sbjct: 212 IKSSVGLGIILHEGIGNTIRVSLTGDPVEEIRSAKL-ILKTLGLRKGGIEVVSCPTCGRT 270
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL ++ E+ + P + +A+MGC+VNGPGE +AD G GG
Sbjct: 271 QIDLIGLANEVEKMVQEFPLDIKVAVMGCVVNGPGEAKEADLGIAGG 317
>gi|16079562|ref|NP_390386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. 168]
gi|430759026|ref|YP_007208950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. BSP1]
gi|1730252|sp|P54482.1|ISPG_BACSU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|1303846|dbj|BAA12502.1| YqfY [Bacillus subtilis]
gi|2634940|emb|CAB14437.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus subtilis subsp. subtilis str. 168]
gi|430023546|gb|AGA24152.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. BSP1]
Length = 377
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 7 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 66
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 67 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 115
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K G +RIG N GSL RI+ YG + GMVE
Sbjct: 116 ----------------EKVEAVVKAAKDKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 159
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 160 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 214
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 215 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 254
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 218 VKSAAGLGAILSKGIGNTMRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 277 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 335
Query: 711 VKR 713
V++
Sbjct: 336 VRK 338
>gi|384564972|ref|ZP_10012076.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora glauca K62]
gi|384520826|gb|EIE98021.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora glauca K62]
Length = 383
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++PI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDYPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLLKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLDGLEVPLR 309
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLDGLEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 725
MGC+VNGPGE +AD G G GK ++V V+K + +Q + LI
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVIKT-VPEDQIVETLI 359
>gi|420474126|ref|ZP_14972802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-19]
gi|393089262|gb|EJB89902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-19]
Length = 359
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGSTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420465320|ref|ZP_14964087.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-6]
gi|393082807|gb|EJB83523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-6]
Length = 359
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|453383401|dbj|GAC82302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
paraffinivorans NBRC 108238]
Length = 395
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T D+ T++++ ++ G D+VR+ +
Sbjct: 27 RRKTRQLFVGPVGVGSDHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI++ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILAKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGLEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|317471588|ref|ZP_07930932.1| GcpE protein [Anaerostipes sp. 3_2_56FAA]
gi|316900903|gb|EFV22873.1| GcpE protein [Anaerostipes sp. 3_2_56FAA]
Length = 358
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 167/313 (53%), Gaps = 37/313 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + +G+ IG +P+ +Q+MT T+DV TV +++ + G D+VR TV
Sbjct: 4 RNNTKVIRIGDKKIGGGNPVLIQSMTNTKTEDVESTVSQILSLEKAGCDIVRCTVPTPEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 ADALGEIK-----KRIHIPLVADIHFNYKLAIAAMENGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ ++EK K+YG +R+G N GSL ++ Y+G + G+VESA
Sbjct: 110 -------------EDRIRAVIEKAKEYGVPIRVGVNSGSLEKELVEKYHGVTAEGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ R+ D+ N S+K+S+ ++ +AY L+ ++ DYPLH+G+TEAG G
Sbjct: 157 VDKVRMIEAFDYDNLAVSIKSSDVLMCARAYELVAEQI-----DYPLHVGITEAGTVYSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+G+G +L GLGDTIRVSLT P EI + L LG+R ++ V
Sbjct: 212 NIKSAVGLGIILHQGLGDTIRVSLTGDPVNEIASAKLILKTLGLRRGGIE--VVSCPTCG 269
Query: 382 RHYFDFQRRSGQL 394
R D +GQ+
Sbjct: 270 RTNIDLISLAGQV 282
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E ++E +++P+ I ++ + I + +G +L GLGD + + G +
Sbjct: 185 RAYELVAEQ-IDYPLHVGITEAGTVYSGN--IKSAVGLGIILHQGLGDTIRVSLTGDPVN 241
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS---HLPGVSIAIM 677
+ +L+ +R E VSCP+CGRT DL ++ ++ + HL + +A+M
Sbjct: 242 EIASAKL-ILKTLGLRRGGIEVVSCPTCGRTNIDLISLAGQVETMAADFEHL-NIKVAVM 299
Query: 678 GCIVNGPGEMADAD 691
GC+VNGPGE +AD
Sbjct: 300 GCVVNGPGEAKEAD 313
>gi|15645249|ref|NP_207419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|410023860|ref|YP_006893113.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif1]
gi|410501627|ref|YP_006936154.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif2]
gi|410682147|ref|YP_006934549.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|419417395|ref|ZP_13957843.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P79]
gi|8928129|sp|O25342.1|ISPG_HELPY RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|2313753|gb|AAD07695.1| protein E (gcpE) [Helicobacter pylori 26695]
gi|384373159|gb|EIE28685.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P79]
gi|409893788|gb|AFV41846.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|409895517|gb|AFV43439.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif1]
gi|409897178|gb|AFV45032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif2]
Length = 359
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
E +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------EKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L +++ ++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMAIKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|372268289|ref|ZP_09504337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alteromonas
sp. S89]
Length = 373
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR +R +MVGNV +G PI VQ+MT +T DVA TV+++ R+ + GAD+VR++V
Sbjct: 8 VRRVSRQIMVGNVPVGGGAPISVQSMTNTETCDVAATVDQIQRLENAGADIVRVSVPSME 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +PLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 68 AAEAFGEIK-----KQVAVPLVADIHFDYRIALRVADLGVDCLRINPGNIGR-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+K + +RIG N GSL + YG+ +P +VES
Sbjct: 115 --------------EKRIRAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEPTPDALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I L+F +F S+KAS+ + AYR L ++ + PLHLG+TEAG
Sbjct: 161 ALRHVDILDSLNFQDFKVSVKASDIFMATAAYRKLATQI-----EQPLHLGITEAGGLRA 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+RVSL P +E+
Sbjct: 216 GTVKSAIGLGALLLDGIGDTLRVSLAADPVEEV 248
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL+DG+GD L + + ++ ++LL+ R+R +++CPSC R
Sbjct: 218 VKSAIGLGALLLDGIGDTLRVSLAADPVEEVK-VGWDLLKSLRLRTKGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAP 699
FD+ + E+ + + + +A++GCIVNGPGE +AD G GG P
Sbjct: 277 NFDVVKTMNELETRLEDITTPLDVAVIGCIVNGPGEAKEADIGLAGGTP 325
>gi|221310431|ref|ZP_03592278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221314754|ref|ZP_03596559.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319677|ref|ZP_03600971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221323954|ref|ZP_03605248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321311990|ref|YP_004204277.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis BSn5]
gi|384176129|ref|YP_005557514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|428279995|ref|YP_005561730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. natto BEST195]
gi|452914901|ref|ZP_21963527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis MB73/2]
gi|291484952|dbj|BAI86027.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. natto BEST195]
gi|320018264|gb|ADV93250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis BSn5]
gi|349595353|gb|AEP91540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|407959753|dbj|BAM52993.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Synechocystis
sp. PCC 6803]
gi|407965328|dbj|BAM58567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Bacillus
subtilis BEST7003]
gi|452115249|gb|EME05645.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis MB73/2]
Length = 375
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKDKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ + + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILSKGIGNTMRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGKI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|404482331|ref|ZP_11017558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridiales
bacterium OBRC5-5]
gi|404344492|gb|EJZ70849.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridiales
bacterium OBRC5-5]
Length = 352
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 178/326 (54%), Gaps = 37/326 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG + PI +Q+M T+DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKYIGDDMPILIQSMCNTKTEDVKATVDQILRLEDAGCDIIRVAVPNSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL + DKIR+NPGN
Sbjct: 61 AALAISEIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGS-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + G+VES
Sbjct: 108 --------------SERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ E+ DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVMMCVKAH-----ELISQRTDYPLHIGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ V
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKLILNNLGLRKGGIE--VVSCPTC 266
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D +G++ EG +++ +
Sbjct: 267 GRTNIDLIGLAGKVEKLVEGYDLNIK 292
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 537 IDATMILHDLPFNE----DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D I+ D+ +N K V + E +S+ ++P+ I + R +I
Sbjct: 155 LDKVKIIEDMDYNNLVISIKSSDVMMCVKAHELISQRT-DYPLHIGITESGTVKRG--MI 211
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+ +G +L G+GD + + G + + +L +R E VSCP+CGRT
Sbjct: 212 KSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKL-ILNNLGLRKGGIEVVSCPTCGRTN 270
Query: 653 FDLQEISAEIREKT-SHLPGVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 271 IDLIGLAGKVEKLVEGYDLNIKVAVMGCVVNGPGEAKEAD 310
>gi|119476377|ref|ZP_01616728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2143]
gi|119450241|gb|EAW31476.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2143]
Length = 371
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+VA+G + PI VQ+MT DT DVA TV ++ + D AD+VR++V
Sbjct: 9 RRKTRQIMVGDVAVGGDAPISVQSMTNTDTCDVAATVAQIRALEDACADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + ++PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKAIRAQV-----SVPLVADIHFDYKIALKVAEYGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + +++ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDKVR-----------AVIDSARDKGIPLRIGVNAGSLEKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I LDF NF S+KAS+ + V AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRHIDILDSLDFQNFKLSVKASDVFMAVAAYRQISTQI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRISLAADPVEEV 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 23/147 (15%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ + +L+ ++R+ +++CPSC R
Sbjct: 218 VKSSVGLGMLLMDGIGDTIRISLAADPVEEVK-VGYEILKSLKLRSKGINFIACPSCSRQ 276
Query: 652 LFD----LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAP-------G 700
FD + E+ + + + T+ L +A++GCIVNGPGE +A+ G GG P G
Sbjct: 277 NFDVVATMNELESRLDDITTPL---DVAVIGCIVNGPGEAKEAEIGLTGGTPQHLIYVDG 333
Query: 701 KIDLYVGK--------TVVKRGIAMEQ 719
K D +GK T+++ +A +Q
Sbjct: 334 KKDHKIGKENLVDHLETMIRNKVAAKQ 360
>gi|418294914|ref|ZP_12906791.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379066274|gb|EHY79017.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIRQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELEVRVEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L +LI+
Sbjct: 337 QK--LNNENLVDELERLIR 353
>gi|254428190|ref|ZP_05041897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alcanivorax
sp. DG881]
gi|196194359|gb|EDX89318.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alcanivorax
sp. DG881]
Length = 372
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR VMVGNV +G + PI VQ+MT +T DV TV ++ R+ D G D+VR++V
Sbjct: 6 KIQRRKTRQVMVGNVPVGGDAPISVQSMTNTETCDVDATVGQIRRLQDAGVDIVRVSVPS 65
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFE 200
A+A +I+ K ++PLVADIH+ +AL VAE D +R+NPGN
Sbjct: 66 MDAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGNIGR------ 114
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
E+ +++ K G +RIG N GSL + YG+ + +V
Sbjct: 115 ----------------EDRIKAVIQCAKDKGLPIRIGVNAGSLEKELQRKYGEPTSDALV 158
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A I + DF +F S+KASN + +QAYR L +++ + PLHLGVTEAG
Sbjct: 159 ESALRHADILDRYDFQDFKVSVKASNVFMTLQAYRKLSSQL-----EQPLHLGVTEAGTF 213
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ +G+LL +G+GDTIRVSL P +E+
Sbjct: 214 RSGTVKSAVALGSLLMEGIGDTIRVSLAADPVEEV 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+QA R+L L E L+ V F +G + + +G+LL++G+GD + +
Sbjct: 189 LQAYRKLSSQL-EQPLHLGVTEAGTFRSG------TVKSAVALGSLLMEGIGDTIRVSLA 241
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSI 674
+ +R F++L+ +R ++CPSC R FD+ + E+ + + V +
Sbjct: 242 ADPVEEVR-VGFDILKSLNLRKKGVNIIACPSCSRQNFDVIKTVNELEARLEDINESVDL 300
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKI 702
A++GC+VNGPGE + D G GG P +
Sbjct: 301 AVIGCLVNGPGEAREVDVGLTGGTPNNL 328
>gi|429196302|ref|ZP_19188274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
ipomoeae 91-03]
gi|428668000|gb|EKX67051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
ipomoeae 91-03]
Length = 385
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ K IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLRKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEVK-VGTQILESLNLRQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|311069108|ref|YP_003974031.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus 1942]
gi|419820245|ref|ZP_14343857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus C89]
gi|310869625|gb|ADP33100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus 1942]
gi|388475657|gb|EIM12368.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus C89]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASRAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSLGIGNTVRISLSADPVEEVKVAREL 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKAS-RAFDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ + + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSLGIGNTVRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ + S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEDYISKVKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGEIVRK 336
>gi|365134461|ref|ZP_09343287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Subdoligranulum sp. 4_3_54A2FAA]
gi|363614037|gb|EHL65540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Subdoligranulum sp. 4_3_54A2FAA]
Length = 350
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +G V +G +P+ VQ+M D+AG V + R+ +G +VR+TV
Sbjct: 1 MRKNTRAVRIGGVTVGGGNPVAVQSMLNVPIHDIAGNVAQAKRLEAEGCQIVRVTVPSVA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+ +KN++ +P+VADIHF VAL AE DKIR+NPGN D
Sbjct: 61 DVPVVEALKNAV-----KMPVVADIHFDYKVALACAEAGVDKIRINPGNIGDD------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
H+ EV S C+ G +RIG N GSL I++ YG +P +VES
Sbjct: 109 -----------AHVGEVAS----ACRARGIPIRIGVNGGSLEKEILAKYGKVTPEALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF++ + S+K+SN V+V+AYR L DYPLH+GVTEAG
Sbjct: 154 AMYHVSLLERHDFNDIVISIKSSNVPVVVEAYRQLSLR-----CDYPLHVGVTEAGTYRM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+GIGTLL +G+GDTIRVSLT+ PEKE+
Sbjct: 209 GLIKSAMGIGTLLLEGIGDTIRVSLTDEPEKEV 241
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 584 GIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYV 643
G +R L I + +G LL++G+GD + + + +R F++L+ E V
Sbjct: 204 GTYRMGL-IKSAMGIGTLLLEGIGDTIRVSLTDEPEKEVR-AGFDILRAAGHFVPGPEVV 261
Query: 644 SCPSCGRTLFDLQEISAEIREKT--SHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
SCP+CGRT ++ +I++E+ E+ + P + +A+MGC+VNGPGE AD G GG
Sbjct: 262 SCPTCGRTNINVAQIASEVEERLRGCNKP-IKVAVMGCVVNGPGEARGADIGIAGG 316
>gi|254480163|ref|ZP_05093411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2148]
gi|214039725|gb|EEB80384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2148]
Length = 376
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+VA+G + PI VQ+MT +T DVA TV +V IAD GAD+VR++V
Sbjct: 9 RRESRKIYVGDVAVGGDAPISVQSMTNTETCDVAATVSQVQAIADAGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + ++PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKQIRAQV-----SVPLVADIHFDHKIALKVAEYGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ ++ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDKVRE-----------VINSARDKGIPIRIGVNAGSLGKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K ++ +F S+KAS + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MHHVDILDKHNYPDFKVSVKASEVFMAVAAYRLLAKEI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRISLAADPVEEV 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ F++L+ ++R+ +++CPSC R
Sbjct: 218 VKSSVGLGMLLMDGIGDTIRISLAADPVEEVK-VGFDILKSLKLRSNGINFIACPSCSRQ 276
Query: 652 LFDLQEI--SAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
FD+ S E R + P + +A++GCIVNGPGE +AD G G +P + G+
Sbjct: 277 NFDVVGTMNSLEQRLEDIRTP-MDVAVIGCIVNGPGEAKEADVGLTGASPSNLIYVDGEP 335
Query: 710 VVKRGIAMEQATDALIQLIKDHGRWAE 736
K I+ E D L ++I+D E
Sbjct: 336 DHK--ISNEAFIDHLEEVIRDKATKLE 360
>gi|420443615|ref|ZP_14942543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-41]
gi|420477630|ref|ZP_14976285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-23]
gi|393061122|gb|EJB61991.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-41]
gi|393092309|gb|EJB92930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-23]
Length = 359
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|399908776|ref|ZP_10777328.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
KM-1]
Length = 371
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 152/273 (55%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R + VG V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+VR++V
Sbjct: 8 VRRKSRQIHVGKVPVGGDAPISVQSMTNTDTLDVAATVAQIQRLEDAGADIVRVSVPCMD 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 68 SAEAFGRIK-----QQVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGK-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V + G +RIG N GSL + YG+ +P +VES
Sbjct: 115 --------------EDRVRAVVSAARDNGIPIRIGVNAGSLEKELQRKYGEPTPEALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF + S+KAS+ + V AYR L + + PLHLG+TEAG
Sbjct: 161 AMRHIDHLDRLDFQEYKVSVKASDVFMAVAAYRQLAKLI-----EQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 216 GTVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 248
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ +++L+ R+R+ +++CPSC R
Sbjct: 218 VKSSIGLGMLLMDGIGDTIRVSLAADPVEEIK-VGYDMLKSLRLRSKGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + + ++++GC+VNGPGE ++D G GG P + GK
Sbjct: 277 NFDVIGTMNALEERLEDIMTPLDVSVIGCVVNGPGEAKESDIGLTGGTPNNLIYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIKDHGRWAE 736
K + + D L +LI++ R E
Sbjct: 337 TK--LTNDHLVDDLERLIREKVREKE 360
>gi|418466653|ref|ZP_13037566.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicoflavus ZG0656]
gi|371552742|gb|EHN79977.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicoflavus ZG0656]
Length = 385
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----PVIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEIKVGIQILESLNLRQRGLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEIK-VGIQILESLNLRQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|404330380|ref|ZP_10970828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 369
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 151/280 (53%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ D G LVR+
Sbjct: 5 TPRTKTRKVRVGNLTIGGANEVIIQSMTTTKTHDVEATVAQIHRLEDAGCQLVRVACPTM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A +IK + +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 EDALAIPDIK-----RQIHIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K +RIG N GSL I+ YG + GMVE
Sbjct: 114 ----------------ENVEAVVRAAKAKHIPIRIGVNAGSLEKHILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + S+KASN + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIVVSLKASNINLAVEAY-----EKAARAFDYPLHLGITESGTKF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL +G+G+TIRVSL+ P +E+ CR L
Sbjct: 213 SGSIKSAAGLGILLHEGIGNTIRVSLSADPVEEVRVCREL 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K + A +E + ++P+ H+
Sbjct: 157 ESALHHIKILEDLD----FHDIVVSL-KASNINLAVEAYEK-AARAFDYPL--HLGITES 208
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ I + +G LL +G+G+ + + + +R LL+ + N T VS
Sbjct: 209 GTKFSGSIKSAAGLGILLHEGIGNTIRVSLSADPVEEVR-VCRELLKVFGLTNAAT-LVS 266
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
CP+CGR DL +I+ ++ H+ + ++++GC VNGPGE +AD G GG
Sbjct: 267 CPTCGRIQIDLIKIANQVEAYIDHVNAPIKVSVLGCAVNGPGEAREADIGIAGG 320
>gi|149182017|ref|ZP_01860503.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
SG-1]
gi|148850282|gb|EDL64446.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
SG-1]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + +Q+MTT T DV TV+E+ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVKVGNLTIGGNDELIIQSMTTTKTHDVEATVKEIHRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN RR
Sbjct: 60 ACPDERAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIG-RR 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
+ E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 EKVE---------------------AVVKAAKEKGIPIRIGVNAGSLERKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYT-----KAAQTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G LL G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGVLLSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGVLLSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKT 709
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ GKT
Sbjct: 275 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGKT 333
Query: 710 VVK 712
V K
Sbjct: 334 VRK 336
>gi|420450281|ref|ZP_14949144.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-45]
gi|393067642|gb|EJB68450.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-45]
Length = 359
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ V +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQVFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|409394992|ref|ZP_11246118.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409395957|ref|ZP_11246982.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409119456|gb|EKM95839.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409120361|gb|EKM96710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
Length = 370
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DV TV ++ R+AD GAD+VR++V
Sbjct: 9 RRPSRKIWVGNVAVGGDAPISVQSMTNTETCDVDATVGQIRRLADAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRQLAKQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELEARVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPSNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|336417732|ref|ZP_08598017.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 11_3_2]
gi|336164679|gb|EGN67581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 11_3_2]
Length = 358
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G L R+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIVIQSMTNTNSADVESTVRQINELEKAGCQLARMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL D +GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKEI 247
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALL+D +GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ +E + + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKKVEKEFENEKNKIKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|229820984|ref|YP_002882510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Beutenbergia
cavernae DSM 12333]
gi|229566897|gb|ACQ80748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Beutenbergia cavernae DSM 12333]
Length = 392
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 179/346 (51%), Gaps = 50/346 (14%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E P+L PR RKTR + VG+V +G + P+ VQ+MTT T D+ T++++
Sbjct: 19 EAPPVLAPR------------RKTRKIRVGSVEVGGDAPVSVQSMTTTKTTDINATLQQI 66
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECF 182
+ G D+VR+ + +ADA ++ K IP++ADIHF P A C
Sbjct: 67 AELTATGCDIVRVACPTQDDADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIDAGCA 121
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
+RVNPGN + DD+ ++ + + K G ++RIG N GS
Sbjct: 122 -AVRVNPGN----------IRKFDDKVKE-----------IADAAKAAGTSLRIGVNAGS 159
Query: 243 LSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
L R+++ YG +P +VESA A + + DFH+F S+K ++PVVMV+AY LL
Sbjct: 160 LDPRLLAKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-- 217
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRL 360
D+PLHLGVTEAG G +KSA G LL G+GDTIRVSL+ PP +E+ + L
Sbjct: 218 ---GDWPLHLGVTEAGPAFQGTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGIQIL 274
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
+L +R +L+ P R D + ++ EG EV R
Sbjct: 275 QSLNLRPRKLEIVSCP--SCGRAQVDVYTLAERVTAGLEGLEVPLR 318
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 209 RAYELLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSQGIGDTIRVSLSAPPVE 265
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ + T+ L G+ + A+
Sbjct: 266 EVK-VGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAERV---TAGLEGLEVPLRVAV 321
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 322 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVVK 356
>gi|291280176|ref|YP_003497011.1| 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase [Deferribacter
desulfuricans SSM1]
gi|290754878|dbj|BAI81255.1| 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase [Deferribacter
desulfuricans SSM1]
Length = 350
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 158/272 (58%), Gaps = 33/272 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ + +GN+ IG ++PI VQ+MT DT+D+ T+ ++ + + G ++VR+ V +
Sbjct: 1 MRKKTKIIELGNLKIGGDNPITVQSMTNTDTRDIEATINQIKSLENAGCEIVRVAVVDEE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVA-LRVAECFDKIRVNPGNFADRRAQFEQL 202
A + IK+ + NIPL+ADIHF +A L + D IR+NPGN
Sbjct: 61 AAKSIRFIKDKI-----NIPLIADIHFDYRLAILSMENGADGIRINPGNIGKA------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EY K++ ++ K + A+RIG N GSL + S YG S + MVESA
Sbjct: 109 -----EYVKKI----------IDAAKMHNVAIRIGVNSGSLEKELKSKYGVSAKAMVESA 153
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
++ + F + FS+KASN ++ ++AYR + DYPLHLGVTEAG G
Sbjct: 154 LKYQQFFEDNGFEDMKFSLKASNVMMTIEAYR-----EFSKRSDYPLHLGVTEAGTFFSG 208
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIGTLL +G+GDT+RVSLT P +E+
Sbjct: 209 TIKSAVGIGTLLAEGIGDTLRVSLTADPVEEV 240
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQD 618
A R F S+ L+ V F +G I + +G LL +G+GD L +
Sbjct: 183 AYREFSKRSDYPLHLGVTEAGTFFSG------TIKSAVGIGTLLAEGIGDTLRVSLTADP 236
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIM 677
+ +R F +L+ +R + VSCP+CGR +L E++ ++ + +S+A+M
Sbjct: 237 VEEVR-VGFEILKALGLRERGVDIVSCPTCGRCEINLVELAEKVEKALVVFDKKISVAVM 295
Query: 678 GCIVNGPGEMADADFGYVGG 697
GC VNGPGE +AD+G GG
Sbjct: 296 GCPVNGPGEAREADYGIAGG 315
>gi|333901475|ref|YP_004475348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fulva 12-X]
gi|333116740|gb|AEF23254.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fulva 12-X]
Length = 370
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V +G + PI VQ+MT DT DVA TVE++ R+ GAD+VR++V
Sbjct: 9 RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVEQIRRLEAAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVNLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSSVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSSVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P + GK
Sbjct: 277 NFDVVKTMNELETRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + D L +LI+
Sbjct: 337 SK--LTNTNLVDELEKLIR 353
>gi|172040513|ref|YP_001800227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Corynebacterium urealyticum DSM 7109]
gi|448823491|ref|YP_007416656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7111]
gi|254806873|sp|B1VGA4.1|ISPG_CORU7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171851817|emb|CAQ04793.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|448276988|gb|AGE36412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7111]
Length = 386
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GSEHPI VQ+MTT T D+ T++++ ++ G D+VR+ R+
Sbjct: 19 RRKTRQLMVGDVGVGSEHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPKPRD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P + E +RVNPGN
Sbjct: 79 AEAL-----PIIAKKSPIPVIADIHFQPRYIFQAIEAGCAAVRVNPGNI----------- 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ ++ + + G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 ---KEFDGRVKEV-------AKAAGDAGIPIRIGVNGGSLDKRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K S+PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 IWEAGLFEEHGFGDIAISVKHSDPVVMVEAYRQLAAKT-----DYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ G LL G+GDTIRVSL+ P +EI
Sbjct: 228 TIKSSVAFGALLSQGIGDTIRVSLSADPVEEI 259
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 236 GALLSQGIGDTIRVSLSADPVEEIK-VGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 294
Query: 659 SAEIREKTSHLPGVS----IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ +A+MGC+VNGPGE DAD G G GK ++V V+K
Sbjct: 295 AEEV---TAGLEGMEFPLRVAVMGCVVNGPGEARDADLGVASGN-GKGQIFVKGEVIKT- 349
Query: 715 IAMEQATDALIQ 726
+ +Q + LI+
Sbjct: 350 VPEDQIVETLIE 361
>gi|377567892|ref|ZP_09797094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
terrae NBRC 100016]
gi|377534915|dbj|GAB42259.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
terrae NBRC 100016]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFSAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAA-----ASDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|256396861|ref|YP_003118425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Catenulispora
acidiphila DSM 44928]
gi|256363087|gb|ACU76584.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Catenulispora acidiphila DSM 44928]
Length = 389
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 173/328 (52%), Gaps = 38/328 (11%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
VRRK+R +MVGNV +G + P+ VQ+MTT T DV T++++ ++ G +VR+ V +
Sbjct: 17 AVRRKSRQIMVGNVPVGGDAPVSVQSMTTTLTADVNATLQQIAQLTAAGCQIVRVAVPSQ 76
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFE 200
+ADA +I + IP++ADIHF P A C +RVNPGN
Sbjct: 77 DDADALPQIA-----RKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN--------- 121
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
++ DD+ + + + K G +RIG N GSL R+ YG + +V
Sbjct: 122 -IKAFDDKVGE-----------IAKAAKAAGVPIRIGVNAGSLDKRLYEKYGKATAEALV 169
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA + + DF + S+K ++PVVM+ AYRLL DYPLHLGVTEAG
Sbjct: 170 ESALWECSLFEEHDFRDIKISVKHNDPVVMINAYRLLA-----EACDYPLHLGVTEAGPA 224
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFE 378
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +LG+R L+ P
Sbjct: 225 FQGTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEVKVGAQILESLGLRKRGLEIVSCP-- 282
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + Q+ +G +V R
Sbjct: 283 SCGRAQVDVYKLADQVSAALDGLKVPLR 310
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 229 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEVK-VGAQILESLGLRKRGLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ +++ ++ L + +A+MGC+VNGPGE +AD G G GK ++V V
Sbjct: 288 QVDVYKLADQVSAALDGLKVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEV 346
Query: 711 VK 712
+K
Sbjct: 347 IK 348
>gi|116669965|ref|YP_830898.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. FB24]
gi|166216864|sp|A0JUS8.1|ISPG_ARTS2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116610074|gb|ABK02798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. FB24]
Length = 388
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IARAAKDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|343926738|ref|ZP_08766235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
alkanivorans NBRC 16433]
gi|343763337|dbj|GAA13161.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
alkanivorans NBRC 16433]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|340752140|ref|ZP_08688948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 2_1_31]
gi|229421955|gb|EEO37002.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 2_1_31]
Length = 351
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR V VGN++IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ + A+A
Sbjct: 2 TRIVKVGNLSIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNVKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + +YPLHLGVTEAG G +K
Sbjct: 155 VRLLEKYNFFDIVISLKSSNVKMMVEAYRKISSLV-----NYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSF 627
+N+P+ H+ + + + +GALLVDG+G L L E P ++ ++
Sbjct: 189 VNYPL--HLGVTEAGTKFQGTVKSAIGIGALLVDGIGATLRVSLTENPVEEIKVAKE--- 243
Query: 628 NLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGE 686
+L+ + + E +SCP+CGRT DL ++ ++ E+ + +A+MGC+VNGPGE
Sbjct: 244 -ILKVLDLSDEGVEIISCPTCGRTEIDLIGLAKQVEEEFQNEKNKFKVAVMGCVVNGPGE 302
Query: 687 MADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 730
+AD+G G I + K V + ++ E + L +LI +
Sbjct: 303 AREADYGVAAGRG--IGILFKKGEVVKKVSEENLLEELKKLIAE 344
>gi|420442100|ref|ZP_14941040.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-36]
gi|420490789|ref|ZP_14989371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13]
gi|420524636|ref|ZP_15023043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13b]
gi|393058590|gb|EJB59478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-36]
gi|393106249|gb|EJC06793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13]
gi|393130907|gb|EJC31331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13b]
Length = 359
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|357392190|ref|YP_004907031.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Kitasatospora setae KM-6054]
gi|311898667|dbj|BAJ31075.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Kitasatospora setae KM-6054]
Length = 386
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R +MVGNV +G + P+ VQ+MTT T D+ T++++ ++ G +VR+ V + +
Sbjct: 19 RRHSRQIMVGNVPVGGDAPVSVQSMTTTLTSDINATLQQIAQLTASGCQIVRVAVPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN +
Sbjct: 79 ADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+ DD+ + + + K G +RIG N GSL R++ YG +P +VES
Sbjct: 123 KAFDDKVGE-----------IAKAAKAAGVPIRIGVNAGSLDKRLLEKYGRATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF + S+K ++PVVM+ AYR L A DYPLHLGVTEAG
Sbjct: 172 ALWECSLFEEHDFRDIKISVKHNDPVVMINAYRQLAA-----ACDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 227 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGIQILESLNLRQRGLEIVSCP--SC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 GRAQVDVYKLAEEVTAGLEGMEVPLR 310
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 229 IKSAVAFGALLAEGIGDTIRVSLSAPPAEEIK-VGIQILESLNLRQRGLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|304311808|ref|YP_003811406.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HdN1]
gi|301797541|emb|CBL45761.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HdN1]
Length = 374
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 164/305 (53%), Gaps = 37/305 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT T D+ TV +++R+ GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISVQSMTNTKTTDIDATVAQIVRMEAAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EI+ K N+PLVADIHF +AL VAE D +R+NPGN
Sbjct: 69 ADAFGEIR-----KQVNVPLVADIHFDHKIALAVAEKGVDCLRINPGNIGK--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS-DRIMSYYGDSPRGMVESA 262
E+ +VE ++ +RIG N GSL D + Y+ + MVESA
Sbjct: 115 -------------EDRIRAVVESAREKKIPIRIGVNAGSLERDLLRKYHEPTADAMVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF +F S+KASN + V AYR + + + PLHLGVTEAG G
Sbjct: 162 MRHVGILEQLDFPDFKLSLKASNVFMTVDAYRKIAGLI-----EQPLHLGVTEAGTFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSAI +G LL +G+GDT+R+SL P +EI L +LG+R+ + P
Sbjct: 217 TVKSAIALGALLMEGIGDTLRISLAADPVEEIKVGFDILKSLGLRSKGINFIACP--SCS 274
Query: 382 RHYFD 386
R FD
Sbjct: 275 RQNFD 279
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQD 618
A R L E L+ V F +G + + +GALL++G+GD L +
Sbjct: 191 AYRKIAGLIEQPLHLGVTEAGTFRSG------TVKSAIALGALLMEGIGDTLRISLAADP 244
Query: 619 FDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI--REKTSHLPGVSIAI 676
+ ++ F++L+ +R+ +++CPSC R FD+ E+ R + ++P + +A+
Sbjct: 245 VEEIK-VGFDILKSLGLRSKGINFIACPSCSRQNFDVIGTVNELEARLQDINVP-LDVAV 302
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
+GCIVNGPGE +D G GG P + GK
Sbjct: 303 IGCIVNGPGEAKISDVGLTGGTPANLIYREGK 334
>gi|226946067|ref|YP_002801140.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Azotobacter
vinelandii DJ]
gi|259493931|sp|C1DE57.1|ISPG_AZOVD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226720994|gb|ACO80165.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Azotobacter
vinelandii DJ]
Length = 370
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VA+G + PI VQ+MT DT DV TV ++ R+ GAD+VR++V
Sbjct: 9 RRPSRKIWVGPVAVGGDAPISVQSMTNTDTHDVEATVAQIRRLEAAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF NF S+KAS+ + V AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQNFKVSVKASDVFMAVAAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P + GK
Sbjct: 277 NFDVVKTMNELETRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K G E D L +LI+
Sbjct: 337 QKLG--NENLVDELERLIR 353
>gi|398304428|ref|ZP_10508014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Bacillus vallismortis DV1-F-3]
Length = 354
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQVVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K IPLV DIHF +AL+ E DKIR+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KRITIPLVVDIHFDYKLALKAIEGGADKIRINPGNIG-RREKVEA 118
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 119 V---------------------VKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FDYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYVGKTVVKR 713
L+ +V++
Sbjct: 327 LFRKGKIVRK 336
>gi|409391206|ref|ZP_11242898.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rubripertincta NBRC 101908]
gi|403199019|dbj|GAB86132.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rubripertincta NBRC 101908]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|385218888|ref|YP_005780363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Gambia94/24]
gi|420423612|ref|ZP_14922683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-4]
gi|420428623|ref|ZP_14927658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-17]
gi|420430413|ref|ZP_14929441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-20]
gi|420482193|ref|ZP_14980830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2]
gi|420512617|ref|ZP_15011100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2b]
gi|317014046|gb|ADU81482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Gambia94/24]
gi|393041334|gb|EJB42350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-4]
gi|393046282|gb|EJB47262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-17]
gi|393047110|gb|EJB48085.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-20]
gi|393099427|gb|EJC00009.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2]
gi|393157680|gb|EJC57941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2b]
Length = 359
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|419954094|ref|ZP_14470235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri TS44]
gi|387969183|gb|EIK53467.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri TS44]
Length = 370
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DV TV ++ R+AD GAD+VR++V
Sbjct: 9 RRPSRKIWVGNVAVGGDAPISVQSMTNTETCDVEATVGQIRRLADAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRQLARQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEIK-VGFDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELEARVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPSNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|404258929|ref|ZP_10962246.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
namibiensis NBRC 108229]
gi|403402709|dbj|GAC00656.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
namibiensis NBRC 108229]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|365157882|ref|ZP_09354127.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
smithii 7_3_47FAA]
gi|363622552|gb|EHL73711.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
smithii 7_3_47FAA]
Length = 367
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ ++ + G +VR+
Sbjct: 3 EIIH---RSKTRPVKVGNLTIGGSNELIIQSMTTTKTHDVEATVRQIHQLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K +IPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRIHIPLVADIHFDYRLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDFH+ + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFHDIIVSLKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRVSLSADPVEEVKVAREL 252
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GA+L G+G+ L L P ++ R+ LL+ + + +SCP+C
Sbjct: 216 VKSAAGLGAILSKGIGNTLRVSLSADPVEEVKVARE----LLKVFGLSSNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ EI E + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEIEEYIQKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRK 330
Query: 708 KTVVKR 713
+V++
Sbjct: 331 GKIVRK 336
>gi|90417491|ref|ZP_01225414.1| hypothetical protein GB2207_07432 [gamma proteobacterium HTCC2207]
gi|90330732|gb|EAS46011.1| hypothetical protein GB2207_07432 [marine gamma proteobacterium
HTCC2207]
Length = 374
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R +MVGNV +G + PI VQ+MT T DVA TV ++ RI GAD+VR++V
Sbjct: 8 VRRKSRQIMVGNVPVGGDAPISVQSMTNTSTADVAATVAQINRIQAAGADIVRVSVPSMA 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
EA+A EI+ + ++PLVADIHF +ALRVA+ D +R+NPGN +
Sbjct: 68 EAEAFGEIR-----RLVDVPLVADIHFDHHIALRVADLGVDCLRINPGNISK-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E ++ K + +RIG N GSL ++ Y + + MVES
Sbjct: 115 --------------ESRLREVIAKARDLNIPIRIGVNAGSLGKDLLRKYSEPTAEAMVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + K DF +F S+KAS+ + V AYR L + + PLHLG+TEAG
Sbjct: 161 AMRNVDLLDKYDFQDFKVSVKASDIFMAVSAYRDLATRI-----EQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
G +KSAIG+G LL DG+GDT+R+SL P +E
Sbjct: 216 GTVKSAIGLGALLLDGIGDTVRISLAADPAEE 247
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL+DG+GD + + + + ++++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAIGLGALLLDGIGDTVRISLAADPAEEAK-VAWDMLRSLRLRSKGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ E+ + + + ++I+GCIVNGPGE ++DFG GG P +
Sbjct: 277 NFDVISTVNELENRLEDITVPMDVSIIGCIVNGPGEAKESDFGLTGGTPANL 328
>gi|444306096|ref|ZP_21141868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. SJCon]
gi|443481554|gb|ELT44477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. SJCon]
Length = 388
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDYPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|255021265|ref|ZP_05293314.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus ATCC 51756]
gi|340782111|ref|YP_004748718.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus SM-1]
gi|254969276|gb|EET26789.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus ATCC 51756]
gi|340556264|gb|AEK58018.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus SM-1]
Length = 366
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VAIG PI VQ+MT +T+DVA TV ++ R+ GAD+VR++V
Sbjct: 9 RRHSRQIHVGKVAIGGGAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA-ECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + +PLVADIHF +AL+V + D +R+NPGN ++
Sbjct: 69 AEAFRAIRAQV-----EVPLVADIHFDHRIALQVMRDGVDGLRINPGNIG-------SVD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDRGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVAILDELDFHDVKISVKASDVFLAVGAYRLLAQKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAIGLGLLLNEGIGDTIRVSLAADPVEEI 248
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 542 ILHDLPFNEDKIGRVQAARRLFEY----LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL +L F++ KI V+A+ L +++P+ I G+ + +
Sbjct: 167 ILDELDFHDVKIS-VKASDVFLAVGAYRLLAQKVDYPLHLGITEAGGLRSG--TVKSAIG 223
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + + +R F++L+ +R ++CPSC R FD+
Sbjct: 224 LGLLLNEGIGDTIRVSLAADPVEEIR-VGFDILKSLHLRQKGINLIACPSCSRQEFDVIS 282
Query: 658 ISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+ E+ L + ++++GC+VNG GE +AD G GG I + GK V
Sbjct: 283 TINALEERLEDILEPMDVSVIGCVVNGIGEAKEADIGLAGGDKRSILYFKGKQV 336
>gi|120554055|ref|YP_958406.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
aquaeolei VT8]
gi|387814566|ref|YP_005430052.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166217113|sp|A1TZQ0.1|ISPG_MARAV RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|120323904|gb|ABM18219.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
aquaeolei VT8]
gi|381339582|emb|CCG95629.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 372
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ I + GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTNTCDVDATVTQIKAIQEAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIR-----QQVSLPLVADIHFDYKIALRVAELGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD S ++ + +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDR-----------VSAVISAARDRNIPIRIGVNAGSLEKALQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K DF +F S+KAS + V AYRL+ +++ + PLHLG+TEAG G
Sbjct: 162 MRHIDILDKHDFQDFKVSLKASEVFMTVAAYRLIASQI-----EQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTIRVSLAADPVQEI 248
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
AA RL E L+ + F +G + + +G LL+DG+GD + +
Sbjct: 190 AAYRLIASQIEQPLHLGITEAGGFRSG------TVKSSIGLGMLLMDGIGDTIRVSLAAD 243
Query: 618 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAI 676
++ F++L+ R+R+ +++CPSC R FD+ + ++ + + + +AI
Sbjct: 244 PVQEIK-VGFDILKSLRLRSRGINFIACPSCSRQNFDVIQTMNDLEARLEDVNTSMDVAI 302
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
+GCIVNGPGE AD G GG P + GK
Sbjct: 303 IGCIVNGPGEAKVADIGLTGGTPKNLFYMAGK 334
>gi|407803609|ref|ZP_11150443.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax sp. W11-5]
gi|407022453|gb|EKE34206.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax sp. W11-5]
Length = 374
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +G + PI VQ+MT +T DV TV ++ R+ + GAD+VR++V
Sbjct: 9 RRKTRQIMVGKVPVGGDAPISVQSMTNTETCDVEATVAQIRRLEEVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA-ECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K N+PLVADIH+ +AL+VA E D +R+NPGN
Sbjct: 69 AEAFGRIR-----KQVNVPLVADIHYDYKIALKVADEGADCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++ + +G +RIG N GSL + YG+ +VESA
Sbjct: 115 -------------EDRVRAVIQSARDHGIPIRIGVNAGSLEKELQRKYGEPCSDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A I DFH+F S+KASN + VQAYR L A M + PLHLGVTEAG G
Sbjct: 162 MRHADILTGHDFHDFKVSVKASNVFMTVQAYRKLSALM-----EQPLHLGVTEAGVFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ +G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSSVALGMLLMEGIGDTIRISLAADPVEEI 248
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
VQA R+L L E L+ V F +G + + +G LL++G+GD + +
Sbjct: 189 VQAYRKL-SALMEQPLHLGVTEAGVFRSG------TVKSSVALGMLLMEGIGDTIRISLA 241
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSI 674
+ +R F++L+ +R ++CPSC R FD+ + + + V +
Sbjct: 242 ADPVEEIR-VGFDILKSLNLRKKGVNIIACPSCSRQNFDVISTVNALEARLEDINESVDL 300
Query: 675 AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
A++GC+VNGPGE + D G GG P + G+
Sbjct: 301 AVIGCLVNGPGEAREVDVGLTGGTPNNLSYVDGE 334
>gi|217967186|ref|YP_002352692.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dictyoglomus turgidum DSM 6724]
gi|217336285|gb|ACK42078.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dictyoglomus turgidum DSM 6724]
Length = 355
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 178/325 (54%), Gaps = 46/325 (14%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VGN+ IG +PIRVQTMT T DV TV ++ R+A +G ++VR+ V K
Sbjct: 3 RKITRVVKVGNIEIGGNNPIRVQTMTKTPTVDVKATVRQIRRLAKKGCEIVRVGVPDKES 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK K IP+VADIHF +AL E DK+R+NPGN + +
Sbjct: 63 ALALGKIK-----KESPIPIVADIHFDYRLALTALEQGVDKLRLNPGNIKNPK------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
S + ++ K G +R+G+N GSL I+ YG + +VESA
Sbjct: 111 ---------------YVSIIAKEAKARGVPIRVGSNAGSLPKEILEKYGGLTSEALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
R+ DF + + S+KAS+ + V+AYRLL ++ DYPLH+G+TEAG G
Sbjct: 156 LNEVRLLEDNDFTDIVISVKASSVPLTVEAYRLLSEKV-----DYPLHIGITEAGTLFPG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
++S++G+G LL +G+GDTIRVSL+ PP+KE++ L +L +R L+ P
Sbjct: 211 TIRSSVGLGILLYEGIGDTIRVSLSAPPDKEVEVAYEILDSLELRRKGLRVLACPM--CA 268
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R +F P+Q+ +E++ R
Sbjct: 269 RSHF---------PVQEVAKEIEKR 284
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E+ +L+D D T I+ + K V + LSE +++P+ HI
Sbjct: 153 ESALNEVRLLEDNDFTDIVISV-----KASSVPLTVEAYRLLSEK-VDYPL--HIGITEA 204
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLL--LEAPGQDFDFLRDTSFNLLQGCRMRNTKTEY 642
I + +G LL +G+GD + L AP D + ++ +L +R
Sbjct: 205 GTLFPGTIRSSVGLGILLYEGIGDTIRVSLSAPP---DKEVEVAYEILDSLELRRKGLRV 261
Query: 643 VSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVG 696
++CP C R+ F +QE++ EI ++ P + IA+MGC VNGPGE AD G G
Sbjct: 262 LACPMCARSHFPVQEVAKEIEKRFGDYPLNLVIAVMGCEVNGPGEAKWADIGITG 316
>gi|385249145|ref|YP_005777364.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F57]
gi|317181940|dbj|BAJ59724.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F57]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +R+
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNERD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|169829104|ref|YP_001699262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus sphaericus C3-41]
gi|238055496|sp|B1HSS4.1|ISPG_LYSSC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|168993592|gb|ACA41132.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lysinibacillus sphaericus C3-41]
Length = 371
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQIVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ N+P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKAAKA-FNYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEIK-VARELLKSFGLASNMATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKLNVPLKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L++ GKTV K
Sbjct: 327 LFMKGKTVRK 336
>gi|15613964|ref|NP_242267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
halodurans C-125]
gi|20138758|sp|Q9KD18.1|ISPG_BACHD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|10174017|dbj|BAB05120.1| peptidoglycan acetylation [Bacillus halodurans C-125]
Length = 367
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + VQ+MTT T DV TV E+ R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNNEVVVQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIPAIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+E V V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ------------HKVEAV----VKAAKEKGIPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTVRVSLSADPVEEVKVAREL 252
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GA+L G+G+ + L P ++ R+ LL+ + + +SCP+C
Sbjct: 216 VKSAAGLGAILNMGIGNTVRVSLSADPVEEVKVARE----LLKSFGLASNAATLISCPTC 271
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GR DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+
Sbjct: 272 GRIEIDLISIANEMEEYISKIRAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRK 330
Query: 708 KTVVKR 713
+V++
Sbjct: 331 GEIVRK 336
>gi|420497597|ref|ZP_14996157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25]
gi|420527984|ref|ZP_15026376.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25c]
gi|420529853|ref|ZP_15028238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25d]
gi|393113876|gb|EJC14394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25]
gi|393133879|gb|EJC34294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25c]
gi|393136182|gb|EJC36573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25d]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|302554515|ref|ZP_07306857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
gi|302472133|gb|EFL35226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
Length = 385
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAARDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ ++ E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEVK-VGIQILESLNLKERGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLTGMDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|119962180|ref|YP_947313.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
aurescens TC1]
gi|166216863|sp|A1R501.1|ISPG_ARTAT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|119949039|gb|ABM07950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
aurescens TC1]
Length = 388
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL IM YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGIMKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|451818160|ref|YP_007454361.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451784139|gb|AGF55107.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 349
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 150/274 (54%), Gaps = 38/274 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R V VGN+ +G PI VQ+MT TKDV T++++ ++ D G D+VR V +
Sbjct: 3 RRKSRKVKVGNIYVGGNAPITVQSMTNTPTKDVEATLKQIQQLFDAGCDIVRCAVLDMED 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA--DRRAQFEQ 201
A+ EI K IP+VADIHF +AL+ E +R+NPGN DR
Sbjct: 63 AEKLGEI-----TKKSPIPVVADIHFDYKLALKAIENGVSALRINPGNIGSVDR------ 111
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
L E C + +RIG N GSL I+ YG + G+VE
Sbjct: 112 ------------------IKILKEACVEKQIPIRIGVNSGSLEKDILEKYGMPTAEGLVE 153
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDF++ + S+K+SN +M+ YR M DYPLHLGVTEAG +
Sbjct: 154 SALRHVKILEDLDFYDIVISIKSSNVQMMIDCYR-----MIAEKCDYPLHLGVTEAGTIQ 208
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IGIGTLL +G+GDTIRVSLT P +EI
Sbjct: 209 RGTIKSSIGIGTLLAEGIGDTIRVSLTTDPVQEI 242
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 542 ILHDLPFNEDKIG----RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F + I VQ + ++E ++P+ + I R I +
Sbjct: 161 ILEDLDFYDIVISIKSSNVQMMIDCYRMIAEK-CDYPLHLGVTEAGTIQRG--TIKSSIG 217
Query: 598 VGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL +G+GD + L P Q+ +L+ ++ E+VSCP+CGRT +
Sbjct: 218 IGTLLAEGIGDTIRVSLTTDPVQEIKV----GTEILRTLGLKKKGVEFVSCPTCGRTQIN 273
Query: 655 LQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKR 713
L +I+ E+ ++ +H + +A+MGC+VNGPGE +AD G GG I G+ + K
Sbjct: 274 LIKIAEEVEKRLENHKKDIKVAVMGCVVNGPGEAREADIGIAGGIGEGIIFKKGQIIKK- 332
Query: 714 GIAMEQATDALIQLIKD 730
+ E+ DAL++ I++
Sbjct: 333 -VKEEELVDALMKEIEN 348
>gi|433608801|ref|YP_007041170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccharothrix
espanaensis DSM 44229]
gi|407886654|emb|CCH34297.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccharothrix
espanaensis DSM 44229]
Length = 387
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GSE P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLMVGSVGVGSEFPVSVQSMTTTVTADVNATLQQIAELTASGCDIVRVACPSQDD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
AD + + + IP++ADIHF P E +RVNPGN ++
Sbjct: 80 AD-----ALAAIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R+M+ YG +P + ESA
Sbjct: 125 KFDDKVRE-----------IAAAARDHGTPIRIGVNAGSLDPRLMAKYGKATPEALAESA 173
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 174 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 228
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 229 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 286
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 287 RAQVDVYTLAEQVTAGLEGMEVPLR 311
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 202 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVE 258
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 259 EVK-VGHQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGMEVPLRVAV 314
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ----LIKDHG 732
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ L ++ G
Sbjct: 315 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGQVIKT-VPEHQIVETLIEEAMRLAEEMG 372
Query: 733 RWAE 736
AE
Sbjct: 373 ESAE 376
>gi|291533208|emb|CBL06321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Megamonas
hypermegale ART12/1]
Length = 352
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 160/290 (55%), Gaps = 38/290 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR + +G+V IG PI VQ+MT T D TV ++ + D G D+VR+ V
Sbjct: 4 RKMTRQISIGDVKIGGGAPISVQSMTNTKTTDTNATVAQIKALVDAGCDIVRVAVPDMSA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ + IK+ + ++PLVADIHF +AL+ E D +R+NPGN D
Sbjct: 64 AENIYNIKSQV-----DVPLVADIHFDYRLALKAIEQGIDALRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +VE K +RIG N GSL ++++ YG +P +VESA
Sbjct: 110 -------------EERVKAVVEAAKTRNIPIRIGVNAGSLDKKLLAKYGKVTPEALVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E RI KL+F++ S+KA + + + AYRL+ + DYPLHLG+TEAG G
Sbjct: 157 LEHIRILEKLNFYDIKISLKAHDVPLTLDAYRLMSETV-----DYPLHLGITEAGTVNTG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
+KSA+GIG LL +G+GDT R+SLT P E+ ++AN ++A L++
Sbjct: 212 IIKSAVGIGALLAEGIGDTFRISLTGDPVNEV----KVANEILKALGLKE 257
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 525 DESYEELEILK-----DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
+ + E + IL+ DI ++ HD+P D + +SE +++P+ H+
Sbjct: 154 ESALEHIRILEKLNFYDIKISLKAHDVPLTLDA----------YRLMSET-VDYPL--HL 200
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTK 639
+ +I + +GALL +G+GD + G + ++ + +L+ ++
Sbjct: 201 GITEAGTVNTGIIKSAVGIGALLAEGIGDTFRISLTGDPVNEVK-VANEILKALGLKEYG 259
Query: 640 TEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
+SCP+CGR DL I+ ++ ++ S + + +A+MGC+VNGPGE DAD G GG
Sbjct: 260 PTLISCPTCGRCNIDLPSIAEKVEQRLSGITKPIKVAVMGCVVNGPGEARDADIGIAGG 318
>gi|297562555|ref|YP_003681529.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847003|gb|ADH69023.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 385
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +G + P+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 18 RRKTRQIMVGNVPVGGDAPVSVQSMTTTRTSDINATLQQIAELTAAGCQIVRVAVPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ + IP++ADIHF P + A C +RVNPGN
Sbjct: 78 ADAL-----PIIARKSQIPVIADIHFQPKYVFQAIDAGCA-AVRVNPGN----------- 120
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + + + + G +RIG N GSL R++ YG +P +VES
Sbjct: 121 ----------IKKFDDKVAEIAKAAGEAGTPIRIGVNAGSLDKRLLQKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + F + S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWECSLFEEHGFRDIKISVKHNDPVVMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +LG+R L+ P
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEVKVGNQILESLGLRERGLEIVSCP--SC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 284 GRAQVDVYTLAEEVTAGLEGMEVPLR 309
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 599 GALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL 655
GALL +G+GD + L P ++ +L+ +R E VSCPSCGR D+
Sbjct: 235 GALLSEGIGDTIRVSLSAPPAEEVKV----GNQILESLGLRERGLEIVSCPSCGRAQVDV 290
Query: 656 QEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVV 711
++ E+ T+ L G+ + A+MGC+VNGPGE DAD G G GK ++V V+
Sbjct: 291 YTLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEARDADLGVASGN-GKGQIFVKGEVI 346
Query: 712 K 712
K
Sbjct: 347 K 347
>gi|420420579|ref|ZP_14919665.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4161]
gi|393036270|gb|EJB37310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4161]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G+VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGSVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420519407|ref|ZP_15017851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-5b]
gi|393128499|gb|EJC28943.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-5b]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ + SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKCLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|386746211|ref|YP_006219428.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori HUP-B14]
gi|384552460|gb|AFI07408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori HUP-B14]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGSTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|334136436|ref|ZP_08509902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF7]
gi|333606046|gb|EGL17394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF7]
Length = 382
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 153/278 (55%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VG++ IG + +Q+M T T DV TV E+ R+ + G LVR+TV
Sbjct: 4 RKDTRPVRVGDLTIGGSDEVIIQSMCTTKTADVKATVAEIHRLEEAGCQLVRVTVNNMEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K NIPLV+DIHF +AL E DK+R+NPGN RR++ E
Sbjct: 64 ADAVKEIK-----KQINIPLVSDIHFDHRLALAAIENGIDKVRINPGNIG-RRSKVE--- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+V+ CK+ G +RIG N GSL + ++ YG +P MVESA
Sbjct: 115 ------------------AVVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ + S+KAS+ + + AY ++YPLHLG+TEAG G
Sbjct: 157 LFHIGILEELDFHDIIVSLKASDVPMAIAAYT-----QAAQAFNYPLHLGITEAGTLFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 212 TVKSAAGLGALLSMGIGSTMRISLSADPVEEVKVAREL 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL G+G + + + ++ + LL+ + +SCP+CGR
Sbjct: 213 VKSAAGLGALLSMGIGSTMRISLSADPVEEVK-VARELLKTFGLITNAATLISCPTCGRL 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ ++L + ++++GC VNGPGE +AD G G
Sbjct: 272 DIDLFSIANEVEAYIANLKVPIKVSVLGCAVNGPGEAREADIGIAGA 318
>gi|158313022|ref|YP_001505530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Frankia sp.
EAN1pec]
gi|254806878|sp|A8L6E2.1|ISPG_FRASN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|158108427|gb|ABW10624.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Frankia
sp. EAN1pec]
Length = 384
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + P+ +Q+M T T DV T++++ ++ G +VR+ V + +
Sbjct: 18 RRLSRQIHVGNVPVGGDAPVSIQSMCTTLTSDVNATLQQIAQLTAAGCQIVRVAVPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA I + IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADALPTIA-----RKSPIPIIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ + + K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVGE-----------IARAAKAAGTPIRIGVNAGSLDKRLLEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DF + S+K ++PV+M+QAYRLL DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHDFRDIKISVKHNDPVIMIQAYRLLA-----QACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +LG+R +L+ P
Sbjct: 226 GTVKSAVAFGALLSEGIGDTIRVSLSAPPIEEIKVASAILESLGLRERKLEIVSCP--SC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 284 GRAQVDVYTLANEVSAGLEGMEVPLR 309
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ S +L+ +R K E VSCPSCGR D+ +
Sbjct: 235 GALLSEGIGDTIRVSLSAPPIEEIKVAS-AILESLGLRERKLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ ++ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANEV---SAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGKVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|420404662|ref|ZP_14903842.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6271]
gi|393024532|gb|EJB25642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6271]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRSLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 542 ILHDLPFNEDKIG-------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
+L DL F + KI R A R+ L + +P H+ + I +
Sbjct: 161 LLEDLDFTDFKISLKASDVMRTMQAYRMLRSL----VIYP--FHLGVTEAGNLFSSSIKS 214
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + + G+ + ++ L R++ +SCP+CGR +
Sbjct: 215 AMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRIEAN 273
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK + K
Sbjct: 274 LVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVIHK 332
>gi|365824513|ref|ZP_09366587.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
graevenitzii C83]
gi|365259573|gb|EHM89558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
graevenitzii C83]
Length = 398
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 40/293 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR +MVG+V +G + PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 26 RKPTRKIMVGSVPVGGDAPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 86 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIKAGCGAVRVNPGN----------IR 130
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCK---KYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
DD+ + E CK YG ++RIG N GSL R++ YG +P +V
Sbjct: 131 KFDDQ--------------VAEICKMASDYGVSLRIGVNAGSLDPRLLKKYGKATPEALV 176
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+F S+K ++PV MVQAYRLL + ++PLHLGVTEAG
Sbjct: 177 ESAVWEASLFEENDFHDFKISVKHNDPVTMVQAYRLLSEK-----GNWPLHLGVTEAGPA 231
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQ 371
G +KS G LL +G+GDTIRVSL+ PP +E+ +L +G+R +L+
Sbjct: 232 FQGTIKSCAAFGVLLAEGIGDTIRVSLSAPPVEEVKVGTKLLEFMGLRPRKLE 284
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 543 LHDLPFN---EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
HD + D + VQA + LSE N+P+ H+ I + G
Sbjct: 191 FHDFKISVKHNDPVTMVQA----YRLLSEKG-NWPL--HLGVTEAGPAFQGTIKSCAAFG 243
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
LL +G+GD + + + ++ LL+ +R K E VSCPSCGR D+ ++
Sbjct: 244 VLLAEGIGDTIRVSLSAPPVEEVK-VGTKLLEFMGLRPRKLEIVSCPSCGRAQVDVWTLA 302
Query: 660 AEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
++ E + + +A+MGC+VNGPGE +AD G G GK ++V VV+
Sbjct: 303 EKVEEGLKDVKAPLRVAVMGCVVNGPGEAREADLGCASGN-GKGQIFVRGKVVE 355
>gi|335040511|ref|ZP_08533638.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Caldalkalibacillus thermarum TA2.A1]
gi|334179591|gb|EGL82229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Caldalkalibacillus thermarum TA2.A1]
Length = 365
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR V VGNV IG + +Q+MTT T DV TV ++ R+ + G +VR+ R
Sbjct: 5 RTQTRPVRVGNVTIGGNDHVVIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRVACPDMRA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 65 AEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGKR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V+ K+ G +RIG N GSL RI+ YG + GMVESA
Sbjct: 112 --------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTADGMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ + S+KAS+ + ++AY + ++YPLHLG+TEAG G
Sbjct: 158 LYHISILEELDFHDIVVSLKASDVRLAIEAY-----QKAAKTFNYPLHLGITEAGTLFAG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G TIR+SL+ P +E+ R L
Sbjct: 213 TIKSAAGLGALLAQGIGSTIRISLSADPVEEVRVAREL 250
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +GALL G+G + + + +R + LL+ + +SCP+CGR
Sbjct: 214 IKSAAGLGALLAQGIGSTIRISLSADPVEEVR-VARELLKAFGLAANAATLISCPTCGRI 272
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ EI E + + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 273 EIDLISIANEIEEYIAKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRHGKI 331
Query: 711 VKR 713
V++
Sbjct: 332 VRK 334
>gi|297571188|ref|YP_003696962.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arcanobacterium haemolyticum DSM 20595]
gi|296931535|gb|ADH92343.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arcanobacterium haemolyticum DSM 20595]
Length = 386
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 33/287 (11%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
L +P K E++ RRKTR + VGNV +G + P+ VQ+MTT T D+ T++++ +
Sbjct: 7 LGIPAVKEPEAVLAP-RRKTRQIQVGNVKVGGDAPVSVQSMTTTKTHDIGATLQQIAELT 65
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
G D++R+ ++ADA ++ IP++ADIHF P + +RVN
Sbjct: 66 ASGCDIIRVACPTDKDADAL-----PIIAAKSQIPVIADIHFQPRYVFAAIDAGCGVRVN 120
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN ++ ++ + G A+RIG N GSL R++
Sbjct: 121 PGN---------------------IKKFDDRIPEIAAAANANGTAMRIGINAGSLDPRLL 159
Query: 249 SYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
YG +P +VESA AR+ FH+F S+K +PV MV+AY+LL D+
Sbjct: 160 KKYGKATPEALVESAVNEARLFEDAGFHDFAISVKHHDPVTMVRAYQLLS-----EAGDW 214
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
PLHLGVTEAG G +KS++ G LL G+GDTIRVSL+ PP +E+
Sbjct: 215 PLHLGVTEAGPAFQGTVKSSVAFGALLSQGIGDTIRVSLSAPPVEEV 261
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R K E VSCPSCGR D+ +
Sbjct: 238 GALLSQGIGDTIRVSLSAPPVEEVK-VGEAILRSLNLRPKKLEIVSCPSCGRAQVDVYTL 296
Query: 659 SAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKTV 710
+ ++ E K P + +A+MGC+VNGPGE +AD G G GK ++V GK V
Sbjct: 297 AEQVSEGLKDVSFP-LRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGKVV 349
>gi|85712737|ref|ZP_01043782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Idiomarina
baltica OS145]
gi|85693469|gb|EAQ31422.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Idiomarina
baltica OS145]
Length = 371
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV IG PI VQ+MT +T DV TVE++ RIA GAD+VR++V
Sbjct: 8 RRPSRRIYVGNVPIGDNAPIAVQSMTNTETTDVQATVEQIKRIAAAGADIVRVSVPTMDA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A L+++ +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 68 AEAF-----KLIKQQSPVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRIRAVVDAARDKNIPIRIGVNGGSLERELQEKYGEPTPEALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF +F S+KAS+ + V++YRLL ++ D PLHLG+TEAG G
Sbjct: 161 MRHVDILDRLDFQDFKVSVKASDVFLAVESYRLLAKQI-----DQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDT+RVSL P +EI
Sbjct: 216 SVKSSIGLGMLLAEGIGDTLRVSLAADPVEEI 247
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 217 VKSSIGLGMLLAEGIGDTLRVSLAADPVEEIK-VGFDMLKSLRIRSRGINFIACPSCSRQ 275
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + ++ + + ++++GC+VNGPGE ++ G + GA K LY+G
Sbjct: 276 EFDVISTVNALEQRLEDITEPMDVSVIGCVVNGPGEALISEVG-LAGAKSKSGLYIGGER 334
Query: 711 VKRGIAMEQATDALIQLIKDHGRW 734
K + D L I+D +
Sbjct: 335 QKLRLDNNDLVDQLEAQIRDRVEY 358
>gi|345853888|ref|ZP_08806757.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
zinciresistens K42]
gi|345634651|gb|EGX56289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
zinciresistens K42]
Length = 385
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + +P++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQLPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AY+LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVRAYQLLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEV 258
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R ++ L+E ++P+ H+ I + GALL G+GD + + +
Sbjct: 200 RAYQLLAEQ-CDYPL--HLGVTEAGPAFQGTIKSAVAFGALLSQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ +R E VSCPSCGR D+ +++ E+ T+ L G+ + A+
Sbjct: 257 EVK-VGNQILESLNLRQRGLEIVSCPSCGRAQVDVYKLAEEV---TAGLTGMEVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|448748163|ref|ZP_21729808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacter
[Halomonas titanicae BH1]
gi|445564284|gb|ELY20408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacter
[Halomonas titanicae BH1]
Length = 375
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DVA TV ++ ++ GAD+VR++V
Sbjct: 13 RRHSRQIQVGNVAVGGDAPIAVQSMTNTNTLDVAATVAQIQQLEKAGADIVRVSVPDMDA 72
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ +IK K N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 73 AETFGQIK-----KLVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 118
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 119 -------------EDRVRAVVSAARDHGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V AYR L A + + PLHLG+TEAG G
Sbjct: 166 MRHIDYLDRLDFPDFKVSVKASDVFMAVAAYRDLAARI-----EQPLHLGITEAGGLRSG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 221 TVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 252
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ F++L+ ++R+ +++CPSC R
Sbjct: 222 VKSSIGLGMLLMDGIGDTIRVSLAADPVEEIK-VGFDMLRSLKLRSKGINFIACPSCSRQ 280
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + ++ E+ + ++++++GC+VNGPGE + D G GG+P + GK
Sbjct: 281 NFDVIDTMNQLEERLEDVMTPLNVSVIGCVVNGPGEAKETDIGLTGGSPANLVYIDGKPA 340
Query: 711 VKRGIAMEQATDALIQLIKDHGR 733
K + + D L QLI++ R
Sbjct: 341 SK--LRNDHLVDDLEQLIREKVR 361
>gi|407796201|ref|ZP_11143157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salimicrobium
sp. MJ3]
gi|407019555|gb|EKE32271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salimicrobium
sp. MJ3]
Length = 367
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VGN+ IG + VQ+MTT T DV TV E++R+ + G +VR+
Sbjct: 4 THRKDTRPVKVGNLTIGGSDQVVVQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDD 63
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K NIPLV DIHF AL+ E DKIR+NPGN R
Sbjct: 64 RAADAIPEIK-----KRINIPLVVDIHFDYRKALKAIEGGADKIRINPGNIGKR------ 112
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ +EEV V+ K G +RIG N GSL I+ YG + +GMVE
Sbjct: 113 ------------EKVEEV----VKAAKANGVPIRIGVNAGSLERHILEKYGYPTAQGMVE 156
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I +LDFH+ + S+KAS+ + ++AY E YPLHLG+TE+G
Sbjct: 157 SALHHIQILEELDFHDIIVSLKASDVKLAIEAY-----EKAAEQISYPLHLGITESGTLF 211
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G T+R+SL+ P +E+ R L
Sbjct: 212 AGTVKSAAGLGAILSKGIGSTVRISLSADPVEEVKVAREL 251
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+++D HD+ + K V+ A +E +E +++P+ I
Sbjct: 156 ESALHHIQILEELD----FHDIIVSL-KASDVKLAIEAYEKAAEQ-ISYPLHLGITESGT 209
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G + + + ++ + LL+ + + +S
Sbjct: 210 LFAGTVKSAAG--LGAILSKGIGSTVRISLSADPVEEVK-VARELLKTYGLASNAATLIS 266
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E + + +A++GC VNGPGE +AD G + GA G+
Sbjct: 267 CPTCGRIEIDLISIANEVEEYIQTIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGL 325
Query: 704 LYVGKTVVKR---GIAMEQATDALIQLIKDH 731
L+ ++++ I +E+ + +L ++H
Sbjct: 326 LFRHGEIIRKVPEDIMVEELKKEVDKLAEEH 356
>gi|359433550|ref|ZP_09223877.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20652]
gi|357919806|dbj|GAA60126.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20652]
Length = 372
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I + GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQNAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEIK-VGFDILNSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + +S++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVSTMNQLEERLEDIIEPMSVSVIGCVVNGPGEALVSDIG-LAGANRRSGLYI 331
>gi|21224045|ref|NP_629824.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicolor A3(2)]
gi|289768771|ref|ZP_06528149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
gi|20138767|sp|Q9KYR9.1|ISPG2_STRCO RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
2; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 2
gi|7801268|emb|CAB91132.1| hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289698970|gb|EFD66399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
Length = 385
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +EI + L +L +R L+ +
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEIKVGIQILESLNLRQRGLE--IVSCPSCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEIK-VGIQILESLNLRQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|284048709|ref|YP_003399048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidaminococcus fermentans DSM 20731]
gi|283952930|gb|ADB47733.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidaminococcus fermentans DSM 20731]
Length = 355
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 162/285 (56%), Gaps = 35/285 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+RT+ +G V IG E+P+ VQ+MT T+++ TV+++ R+ D+G +++R V
Sbjct: 3 RRKSRTIAIGQVTIGGENPVAVQSMTNTKTENIPATVDQIHRLTDRGCEIIRCAVPTLEA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI+ K IPLVADIHF +AL E D +R+NPGN R
Sbjct: 63 AQALKEIR-----KQIAIPLVADIHFDYRLALAALESGVDALRLNPGNIGGR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
D +K +VE ++ +RIG N GSL ++ YG + +VE+A
Sbjct: 110 ---DRVEK-----------VVEAARQRQVPIRIGVNAGSLPKDLLEKYGHPTAEALVEAA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I ++D++N + S+KA + + + AYRL+ E DYPLH+G+TEAG G
Sbjct: 156 WRHIHILEEMDYNNIVISLKAHDVPLTLAAYRLMAREC-----DYPLHVGITEAGTIRSG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
+KSA+GIGTLL +G+GDTIRVSLT P EID L +LG+R
Sbjct: 211 LIKSAVGIGTLLAEGIGDTIRVSLTGDPLAEIDAGFEILKSLGLR 255
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 525 DESYEELEILKDIDATMIL-----HDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
+ ++ + IL+++D I+ HD+P AA RL + L+ +
Sbjct: 153 EAAWRHIHILEEMDYNNIVISLKAHDVPLT-------LAAYRLMARECDYPLHVGITEAG 205
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTK 639
+G+ I + +G LL +G+GD + + G + D F +L+ +R
Sbjct: 206 TIRSGL------IKSAVGIGTLLAEGIGDTIRVSLTGDPLAEI-DAGFEILKSLGLRQHG 258
Query: 640 TEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
VSCP+CGRT + L++++ E+ + + +P +++A+MGC+VNGPGE +AD G GG
Sbjct: 259 PTLVSCPTCGRTCWSLEKVAKEVEARLAEIPEPITVAVMGCVVNGPGEAREADVGIAGG 317
>gi|88799905|ref|ZP_01115477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Reinekea
blandensis MED297]
gi|88777336|gb|EAR08539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Reinekea sp.
MED297]
Length = 372
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+V +G + PI VQ+MT +T DVA TV ++ + GADLVR++V
Sbjct: 11 RRKSRKIWVGDVPVGGDAPISVQSMTNTETTDVAATVAQIQALEKAGADLVRVSVPTMEA 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I++ + NIPL++DIHF +ALRVAE D +R+NPGN
Sbjct: 71 AEAFGKIRSQV-----NIPLISDIHFDYRIALRVAELGVDCLRINPGNIGR--------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -------------EDRVRAVVDAARDKNIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 163
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LD+ NF S+KAS+ + V AYRL+ ++ + PLHLG+TEAG G
Sbjct: 164 MRHIDILDRLDYPNFKLSLKASDVFMTVAAYRLIADQI-----EQPLHLGITEAGGLRSG 218
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIRVSL P +EI
Sbjct: 219 TVKSSVGLGMLLMDGIGDTIRVSLAADPVEEI 250
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ F++L+ R+RN +++CPSC R
Sbjct: 220 VKSSVGLGMLLMDGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRNKGINFIACPSCSRQ 278
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
FD+ ++ + L + +A++GC+VNGPGE +AD G GG+P + +YVG
Sbjct: 279 NFDVINTMNQLEGRLDDVLTPLDVAVIGCVVNGPGEAKEADLGITGGSPNNL-VYVG 334
>gi|167746786|ref|ZP_02418913.1| hypothetical protein ANACAC_01498 [Anaerostipes caccae DSM 14662]
gi|167653746|gb|EDR97875.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
caccae DSM 14662]
Length = 358
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 168/313 (53%), Gaps = 37/313 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + +G+ IG +P+ +Q+MT T+DV TV +++ + G D+VR TV
Sbjct: 4 RNNTKVIRIGDKKIGGGNPVLIQSMTNTKTEDVESTVSQILSLEKAGCDIVRCTVPTPEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 ADALGEIK-----KRIHIPLVADIHFNYKLAIAAMENGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ ++EK K+YG +R+G N GSL ++ ++G + G+VESA
Sbjct: 110 -------------EDRIRAVIEKAKEYGVPIRVGVNSGSLEKELVEKHHGVTAEGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ R+ D+ N + S+K+S+ ++ +AY L+ ++ DYPLH+G+TEAG G
Sbjct: 157 VDKVRMIEAFDYDNLVVSIKSSDVLMCARAYELVAEQI-----DYPLHVGITEAGTVYSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+G+G +L GLGDTIRVSLT P EI + L LG+R ++ V
Sbjct: 212 NIKSAVGLGIILHQGLGDTIRVSLTGDPVNEIASAKLILKTLGLRRGGIE--VVSCPTCG 269
Query: 382 RHYFDFQRRSGQL 394
R D +GQ+
Sbjct: 270 RTNIDLISLAGQV 282
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E ++E +++P+ I ++ + I + +G +L GLGD + + G +
Sbjct: 185 RAYELVAEQ-IDYPLHVGITEAGTVYSGN--IKSAVGLGIILHQGLGDTIRVSLTGDPVN 241
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTS---HLPGVSIAIM 677
+ +L+ +R E VSCP+CGRT DL ++ ++ + HL + +A+M
Sbjct: 242 EIASAKL-ILKTLGLRRGGIEVVSCPTCGRTNIDLISLAGQVETMAADFEHL-NIKVAVM 299
Query: 678 GCIVNGPGEMADAD 691
GC+VNGPGE +AD
Sbjct: 300 GCVVNGPGEAKEAD 313
>gi|403526526|ref|YP_006661413.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. Rue61a]
gi|403228953|gb|AFR28375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Arthrobacter sp. Rue61a]
Length = 381
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 12 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 72 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL IM YG +P +VESA
Sbjct: 117 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGIMKKYGKATPEALVESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 166 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 221 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 278
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 279 RAQVDVYTLAEQVTAGLEGMEIPLR 303
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 222 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 280
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 281 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 336
Query: 708 KTVVK 712
V+K
Sbjct: 337 GEVIK 341
>gi|420410161|ref|ZP_14909304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4200]
gi|420433889|ref|ZP_14932894.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24]
gi|420468795|ref|ZP_14967524.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-10]
gi|420470479|ref|ZP_14969188.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-11]
gi|420507654|ref|ZP_15006163.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24b]
gi|420509236|ref|ZP_15007738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24c]
gi|420533071|ref|ZP_15031432.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M1]
gi|420534647|ref|ZP_15032995.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M2]
gi|420536359|ref|ZP_15034701.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M3]
gi|420538062|ref|ZP_15036392.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M4]
gi|420539885|ref|ZP_15038202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M5]
gi|420541549|ref|ZP_15039857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M6]
gi|420543069|ref|ZP_15041363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M9]
gi|393028474|gb|EJB29560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4200]
gi|393050304|gb|EJB51264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24]
gi|393085912|gb|EJB86591.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-11]
gi|393086206|gb|EJB86884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-10]
gi|393117507|gb|EJC18008.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24b]
gi|393120662|gb|EJC21151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24c]
gi|393137532|gb|EJC37915.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M1]
gi|393141287|gb|EJC41652.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M2]
gi|393144007|gb|EJC44351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M3]
gi|393145617|gb|EJC45948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M4]
gi|393146102|gb|EJC46431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M5]
gi|393148169|gb|EJC48493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M6]
gi|393159652|gb|EJC59902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M9]
Length = 359
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|358466696|ref|ZP_09176491.1| hypothetical protein HMPREF9093_00965 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068807|gb|EHI78790.1| hypothetical protein HMPREF9093_00965 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 355
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR + VGN++IG +PI +Q+MT ++ D+ TV ++ + G LVR+T+ + A+A
Sbjct: 2 TRVIKVGNLSIGGNNPIIIQSMTNTNSADIEATVLQINELEKAGCQLVRMTINNLKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENIKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VKLLEKFNFFDIVISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTIK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALLVDG+G L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 208 IKSAIGIGALLVDGIGATLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 263
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GRT DL ++ ++ E+ + +A+MGC+VNGPGE +AD+G G I G
Sbjct: 264 GRTEIDLIGLAKQVEEEFQNEKNKFKVAVMGCVVNGPGEAREADYGIAAGKGIGILFKKG 323
Query: 708 KTVVKRGIAMEQATDALIQLIKD 730
K V K I+ E + L +LI +
Sbjct: 324 KVVKK--ISEENLLEELKKLIAE 344
>gi|402756872|ref|ZP_10859128.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. NCTC 7422]
Length = 371
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 163/286 (56%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI VQ+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVEATVAQIQRCADAGADIMRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K ++PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AEAFGEIR-----KRVSVPLVADIHFDHRIALAVADYGADCLRINPGNIGSD-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
Q + EV V K +G ++RIG N GSL + YG+ + + ++ESA
Sbjct: 115 ----------QKVREV----VAAAKHHGISIRIGVNAGSLEKDLQVKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL ++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSQQI-----DNPLHLGVTEAGIYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRA 367
+KSAI +G LL +G+GDT+R+SL PE EI L +LG+R+
Sbjct: 216 TVKSAIALGGLLMEGIGDTMRISLAAEPEDEIKIGFDILKSLGLRS 261
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 542 ILHDLPFNEDKIGRVQA--------ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
IL L F+E K+ V+A A RL +N L+ V GI+R V
Sbjct: 166 ILDRLDFHEFKVS-VKASNVFLTMDAYRLLSQQIDNPLHLGVTEA-----GIYRTGTVKS 219
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A +G LL++G+GD + + + D ++ F++L+ +R+ +++CPSC R F
Sbjct: 220 A-IALGGLLMEGIGDTMRISLAAEPEDEIK-IGFDILKSLGLRSNGINFIACPSCSRQEF 277
Query: 654 DLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
++ ++ + E+ + + ++++GC VNGPGE +AD G VG +P
Sbjct: 278 NVIQVMQALEERLEDIRTPMDLSVIGCKVNGPGEAKEADIGIVGASP 324
>gi|410727066|ref|ZP_11365289.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium sp. Maddingley MBC34-26]
gi|410599401|gb|EKQ53954.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium sp. Maddingley MBC34-26]
Length = 359
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGN+ +G + PI VQ+MTT TK+V T+ ++ ++ D G D++R V +
Sbjct: 3 RRESRKIKVGNIYVGGDAPITVQSMTTTRTKNVEDTLNQIRKLYDAGCDIIRCAVLDMDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A++ EI K IP+VADIHF +AL+ E +R+NPGN
Sbjct: 63 AESLGEI-----TKKSPIPVVADIHFDYRLALKAIENGVSALRINPGNIG---------- 107
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
I+++ L E C + +RIG N GSL I+ YG + G+VESA
Sbjct: 108 -----------SIDKI-KILKEACSEKKIPIRIGVNSGSLEKDILEKYGMPTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I L+FH+ + S+K+SN +M++ YRL+ + DYPLHLGVTEAG + G
Sbjct: 156 LRHVKILEDLNFHDIVISIKSSNVKMMIECYRLIAEK-----CDYPLHLGVTEAGTIQKG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIGTLL +G+GDTIRVSLT P +EI
Sbjct: 211 TIKSSIGIGTLLAEGIGDTIRVSLTTDPIEEI 242
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 542 ILHDLPFNED----KIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F++ K V+ + ++E ++P+ + I + I +
Sbjct: 161 ILEDLNFHDIVISIKSSNVKMMIECYRLIAEK-CDYPLHLGVTEAGTIQKG--TIKSSIG 217
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + + ++ +L+ ++ E+VSCP+CGRT +L +
Sbjct: 218 IGTLLAEGIGDTIRVSLTTDPIEEIK-VGTEILKALGLKKKGVEFVSCPTCGRTQINLIK 276
Query: 658 ISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
I+ E+ ++ ++ + +A+MGC+VNGPGE +AD G GG I G+ + R +
Sbjct: 277 IAEEVEKRLENYKKDIKVAVMGCVVNGPGEAREADIGIAGGKGEGIIFKKGEII--RKVK 334
Query: 717 MEQATDALIQLIK 729
E+ +AL++ I+
Sbjct: 335 EEELVNALMEEIE 347
>gi|421618660|ref|ZP_16059635.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri KOS6]
gi|409779413|gb|EKN59071.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri KOS6]
Length = 370
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVGQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QRVQLPLVADIHFDYLIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRVSLAADPVEEIK-VGFDILKSLRLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK
Sbjct: 277 NFDVVKTMNELENRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIK 729
K + E D L QLI+
Sbjct: 337 QK--LNNENLVDELEQLIR 353
>gi|452910821|ref|ZP_21959498.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kocuria
palustris PEL]
gi|452833993|gb|EME36797.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kocuria
palustris PEL]
Length = 387
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ P+ VQ+MTT T D+ GT++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIRVGSVGVGSDSPVSVQSMTTTPTTDINGTLQQIAELNAAGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ IP++ADIHF P A C +RVNPGN +
Sbjct: 79 ADAL-----PIIAMKSPIPVIADIHFQPKYVFAAIDAGCAG-VRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ + + K G ++RIG N GSL R+M YG +P + ES
Sbjct: 123 RKFDDQVGE-----------IARAAKDAGVSIRIGVNAGSLDRRLMEKYGKATPEALAES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PV MV+AY+LL D+PLHLGVTEAG
Sbjct: 172 AQWEASLFEEHDFHDFKISVKHNDPVTMVRAYQLLAER-----GDWPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 227 GTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGAQILQSLGLRPKKLE 277
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSQGIGDTIRVSLSAPPVEEVK-VGAQILQSLGLRPKKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ +++ ++ E L + +A+MGC+VNGPGE +AD G G GK ++V V
Sbjct: 288 QVDVYKLADDVTEGLKDLTVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEV 346
Query: 711 VKRGIAMEQATDALI 725
+ R + +Q + LI
Sbjct: 347 I-RTVPEDQIVETLI 360
>gi|420453454|ref|ZP_14952291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-8]
gi|393069942|gb|EJB70735.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-8]
Length = 359
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ S++ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSYIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|421711621|ref|ZP_16150964.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R030b]
gi|407212770|gb|EKE82632.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R030b]
Length = 359
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 542 ILHDLPFNEDKIG-------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
+L DL F KI R A R+ L +N+P H+ + I +
Sbjct: 161 LLEDLDFTNFKISLKASDVMRTIEAYRMLRPL----VNYP--FHLGVTEAGNLFSSSIKS 214
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR +
Sbjct: 215 AMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRIEAN 273
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK + K
Sbjct: 274 LVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVIHK 332
>gi|386755649|ref|YP_006228866.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan18]
gi|420445251|ref|ZP_14944165.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-42]
gi|420451946|ref|ZP_14950796.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-6]
gi|420499733|ref|ZP_14998287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-26]
gi|384561907|gb|AFI02373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan18]
gi|393063445|gb|EJB64292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-42]
gi|393069787|gb|EJB70582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-6]
gi|393149713|gb|EJC50022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-26]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420495918|ref|ZP_14994482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-23]
gi|393112229|gb|EJC12750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-23]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++ + ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASRVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420408758|ref|ZP_14907913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4216]
gi|393022920|gb|EJB24035.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4216]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTLEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|398937804|ref|ZP_10667470.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM41(2012)]
gi|398166572|gb|EJM54666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM41(2012)]
Length = 369
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----KLVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|126652205|ref|ZP_01724384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
B14905]
gi|126590937|gb|EAZ85049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
B14905]
Length = 371
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RTNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVDATVAEILRLEEAGCQIVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E ++ N+P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKAAKA-FNYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEIK-VARELLKSFGLASNMATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKLKVPLKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L++ GKTV K
Sbjct: 327 LFMKGKTVRK 336
>gi|317125365|ref|YP_004099477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Intrasporangium calvum DSM 43043]
gi|315589453|gb|ADU48750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Intrasporangium calvum DSM 43043]
Length = 386
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VG V +GS+ P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 18 RRQTRQIRVGKVGVGSDFPVSVQSMTTTPTTDINATLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA ++ QK+ IP++ADIHF P V + +RVNPGN
Sbjct: 78 ADAL----PAIAQKS-QIPVIADIHFQPKYVYAAIDAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
++ ++ + + K+ G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 121 ---------IREFDDQVGEIARRAKEAGVSIRIGVNAGSLDRRLLAKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVTMVRAYELLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEVKVGSQILMSLGLRPRKLE 276
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 200 RAYELLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ S +L +R K E VSCPSCGR D+ ++ ++ T+ L G+++ A+
Sbjct: 257 EVKVGS-QILMSLGLRPRKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGLTVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPESQIVETLIE 360
>gi|290957029|ref|YP_003488211.1| GcpE2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2)
[Streptomyces scabiei 87.22]
gi|260646555|emb|CBG69652.1| putative GcpE2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase 2) [Streptomyces scabiei 87.22]
Length = 386
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 126 --DDKVKE-----------IAQAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 228 TIKSAVAFGALLAEGIGDTIRVSLSAPPVEEI 259
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ ++ + E VSCPSCGR
Sbjct: 229 IKSAVAFGALLAEGIGDTIRVSLSAPPVEEIK-VGNQILESLNLKPRRLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
V+K
Sbjct: 344 GEVIK 348
>gi|333919260|ref|YP_004492841.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Amycolicicoccus subflavus DQS3-9A1]
gi|333481481|gb|AEF40041.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Amycolicicoccus subflavus DQS3-9A1]
Length = 404
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 38 RRKTRQLMVGDVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 97
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + K IP++ADIHF P E +RVNPGN +
Sbjct: 98 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIEAGCAAVRVNPGNIRE--------- 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
D Q+ + E +P +RIG N GSL R+++ YG + +VESA
Sbjct: 144 -FDGRVQEVAKAAAEANTP-----------IRIGVNAGSLDPRLLAKYGKPTAEALVESA 191
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 192 LWEASLFEEHGFGDFKISVKHNDPVVMVRAYELLAEQS-----DYPLHLGVTEAGPSFQG 246
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 247 TIKSAVAFGALLSKGIGDTIRVSLSAPPAEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 305 RAQVDVYTLANEVTAGLEGMEVPLR 329
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E + ++P+ H+ I + GALL G+GD + + +
Sbjct: 220 RAYELLAEQS-DYPL--HLGVTEAGPSFQGTIKSAVAFGALLSKGIGDTIRVSLSAPPAE 276
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ + A+
Sbjct: 277 EVK-VGHQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLANEV---TAGLEGMEVPLRVAV 332
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 333 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVIKT-VPEAQIVETLIE 380
>gi|325962793|ref|YP_004240699.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468880|gb|ADX72565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 388
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 344 GEVIKT-VPESQIVETLIE 361
>gi|389571801|ref|ZP_10161889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
M 2-6]
gi|388428287|gb|EIL86084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
M 2-6]
Length = 371
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNMGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|157693002|ref|YP_001487464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus SAFR-032]
gi|194017707|ref|ZP_03056317.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus ATCC 7061]
gi|166973785|sp|A8FF87.1|ISPG_BACP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|157681760|gb|ABV62904.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus SAFR-032]
gi|194010607|gb|EDW20179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus ATCC 7061]
Length = 370
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNMGIGNTLRISLSADPVEEVK-VARELLKSFGLAANAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISTIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|407980331|ref|ZP_11161122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
HYC-10]
gi|407412923|gb|EKF34672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
HYC-10]
Length = 371
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA+L G+G+ L + + ++ + LL+ + +SCP+CGR
Sbjct: 216 VKSAAGLGAILNMGIGNTLRISLSADPVEEVK-VARELLKSFGLAANAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L+ +
Sbjct: 275 EIDLISIANEVEEYISKIKAPIKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFRKGEI 333
Query: 711 VKR 713
V++
Sbjct: 334 VRK 336
>gi|308176783|ref|YP_003916189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
arilaitensis Re117]
gi|307744246|emb|CBT75218.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
arilaitensis Re117]
Length = 388
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 19 RRKTRQFQVGSVGVGSDSPISVQSMTTTKTYDINATLQQIAELTAAGCDIVRVACPTDKD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ IP++ADIHF P E +RVNPGN QF
Sbjct: 79 AEAL-----KIIAMKSQIPVIADIHFQPKYVYAAIEAGCGAVRVNPGNIR----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 126 --DDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDRRLLAKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV+AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVRAY-----EMLAERGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 259
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 201 RAYEMLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS----IAI 676
++ +L+ +R K + VSCPSCGR D+ ++ ++ T+ L G+ +A+
Sbjct: 258 EVK-VGNQILESLNLRPRKLDIVSCPSCGRAQVDVYTLAEQV---TAGLEGMKAPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
MGC+VNGPGE DAD G G GK ++V V+K + +Q + LI+
Sbjct: 314 MGCVVNGPGEARDADLGVASGN-GKGQIFVKGEVIKT-VPEDQIVETLIE 361
>gi|385215870|ref|YP_005775827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F32]
gi|317180399|dbj|BAJ58185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F32]
Length = 359
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 154/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRSLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ +SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|315917464|ref|ZP_07913704.1| isoprenoid biosynthesis protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691339|gb|EFS28174.1| isoprenoid biosynthesis protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 357
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 159/284 (55%), Gaps = 35/284 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RK+R V + ++ +G +P+ +Q+MT +T DV TV +++ + + G +LVR+T+ K A
Sbjct: 7 RKSREVQIRDLKLGKGNPVIIQSMTNTETSDVEATVRQILDLEEAGCELVRMTINTKEAA 66
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
A IK + +IPLVADIHF +AL E DK+R+NPGN F
Sbjct: 67 MAIPAIKERV-----HIPLVADIHFDYRLALLAMENGIDKLRINPGNIGSEDKIF----- 116
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+VEK K+ +RIG N GSL I+ YG + MVESA
Sbjct: 117 -----------------LVVEKAKEKKIPIRIGVNSGSLEKHILEKYGTVTADAMVESAM 159
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
++ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G
Sbjct: 160 YHVKLLEKYGFYDIVISLKASNVAMMVEAYRKIQTLV-----DYPLHLGVTEAGTAFQGS 214
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KS+IGIG+LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 258
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G+LLVD +GD + L E P ++ ++ +L+ +R E VSCP+C
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKE----ILKVLGLRKEGVEIVSCPTC 270
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADF 692
GRT DL ++ + +E + IA+MGC+VNGPGE +AD+
Sbjct: 271 GRTEIDLISLAKTVEKEFAKEKRNIKIAVMGCVVNGPGEAREADY 315
>gi|313115650|ref|ZP_07801106.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310622036|gb|EFQ05535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 357
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 153/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ R V +GNV IG ++P+ VQTM +D+ G V + R G ++R+T
Sbjct: 10 MRQLKREVKIGNVTIGGKNPVAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSPA 69
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 70 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG +P MVES
Sbjct: 117 ---DDRVKA-----------VVDACQRKNIPIRIGVNGGSLEKHILAKYGAPTPEAMVES 162
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 163 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 217
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 218 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 251
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 594 AGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+G +G +L++G+GD + L P ++ + +N+L+ E ++CP+CGR
Sbjct: 222 SGMGIGGMLLEGIGDTIRVSLAAEPEKEVE----AGYNILRAVGFPVAGPEVITCPTCGR 277
Query: 651 TLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
T + EI+ E+ ++ + +A+MGC+VNGPGE +AD G GG + GK
Sbjct: 278 TQYPCTEIANEVEKRLQGCKKSIKVAVMGCVVNGPGEAREADIGIAGGKGEAVLFIQGKP 337
Query: 710 VVK 712
+ K
Sbjct: 338 IKK 340
>gi|420460127|ref|ZP_14958926.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-27]
gi|393077229|gb|EJB77978.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-27]
Length = 359
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GM+ESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMIESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|387782374|ref|YP_005793087.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthetase
[Helicobacter pylori 51]
gi|261838133|gb|ACX97899.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthetase
[Helicobacter pylori 51]
Length = 359
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNHSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|398994139|ref|ZP_10697060.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM21]
gi|398133160|gb|EJM22390.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM21]
Length = 369
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|237745060|ref|ZP_04575541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 7_1]
gi|229432289|gb|EEO42501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 7_1]
Length = 358
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVANLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVSLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALL+DG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 VKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSSEGVEIISCPTC 266
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL ++ ++ +E + + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKKVEKEFENEKNKIKIAVMGCVVNGPGEAREADYGIAAG 316
>gi|441518981|ref|ZP_21000688.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454130|dbj|GAC58649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 383
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +GS+ PI VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGKVGVGSDFPISVQSMCTTPTHDINATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADALAEIA-----RRSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M+ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMAKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +L +R +L+ P
Sbjct: 227 GTIKSAVAFGALLTEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLEIVSCP--SC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 GRAQVDVYKLADEVTAGLEGLEVPLR 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 236 GALLTEGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 292
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 293 KLADEV---TAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 348
>gi|420421973|ref|ZP_14921051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4110]
gi|393038491|gb|EJB39525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4110]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|453077986|ref|ZP_21980720.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
triatomae BKS 15-14]
gi|452757621|gb|EME16023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
triatomae BKS 15-14]
Length = 384
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGGVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLQKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ +
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRRLE--IVSCPSC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 GRAQVDVYTLANEVSAGLEGMEVPLR 310
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R + E VSCPSCGR D+ +
Sbjct: 236 GALLSEGIGDTIRVSLSAPPAEEIK-VGTQILQSLNLRPRRLEIVSCPSCGRAQVDVYTL 294
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ ++ L G+ + A+MGC+VNGPGE +AD G G GK ++V VVK
Sbjct: 295 ANEV---SAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVVKT- 349
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 350 VPEAQIVETLIE 361
>gi|154502559|ref|ZP_02039619.1| hypothetical protein RUMGNA_00372 [Ruminococcus gnavus ATCC 29149]
gi|153796751|gb|EDN79171.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ruminococcus
gnavus ATCC 29149]
Length = 360
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ + +GNV IG HP+ +Q+MT T+DVA TVE+++ + + G +++R V
Sbjct: 11 LRNRTKEIRIGNVWIGGSHPVAIQSMTNTKTEDVAATVEQILALEEAGCEIIRCAVPTME 70
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN +
Sbjct: 71 AALALKEIK-----KQIHIPLVADIHFDYRLAIAAIENGADKIRINPGNIGSK------- 118
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +VEK K+Y +R+G N GSL ++ YG + G+VES
Sbjct: 119 ---------------ERVQAVVEKAKEYNVPIRVGVNSGSLEKNLLEKYGGVTAEGIVES 163
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ ++ + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 164 ALDKVRMIEEMGYDNLVVSIKSSDVLMCVRAHELIAEKC-----QYPLHVGITESGTVYS 218
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LGMR ++ P
Sbjct: 219 GNIKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKLILKTLGMRKGGIEVVSCP 274
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L +G+G+ + + G + +R +L+ MR E VSCP+CGRT
Sbjct: 221 IKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKL-ILKTLGMRKGGIEVVSCPTCGRT 279
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 280 RIDLIALANQVEKMVQDIDLDIKVAVMGCVVNGPGEAKEAD 320
>gi|317058980|ref|ZP_07923465.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 3_1_5R]
gi|313684656|gb|EFS21491.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 3_1_5R]
Length = 357
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 159/284 (55%), Gaps = 35/284 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RK+R V + ++ +G +P+ +Q+MT +T DV TV +++ + + G +LVR+T+ K A
Sbjct: 7 RKSREVQIRDLKLGKGNPVIIQSMTNTETSDVKATVRQILDLEEAGCELVRMTINTKEAA 66
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
A IK + +IPLVADIHF +AL E DK+R+NPGN F
Sbjct: 67 MAIPAIKERV-----HIPLVADIHFDYRLALLAMENGIDKLRINPGNIGSEDKIF----- 116
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+VEK K+ +RIG N GSL I+ YG + MVESA
Sbjct: 117 -----------------LVVEKAKEKKIPIRIGVNSGSLEKHILEKYGTVTADAMVESAM 159
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
++ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G
Sbjct: 160 YHVKLLEKYGFYDIVISLKASNVAMMVEAYRKIQTLV-----DYPLHLGVTEAGTAFQGS 214
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KS+IGIG+LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 258
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G+LLVD +GD + L E P ++ ++ +L+ +R E VSCP+C
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKE----ILKVLGLRKEGVEIVSCPTC 270
Query: 649 GRTLFDLQEISAEI-REKTSHLPGVSIAIMGCIVNGPGEMADADF 692
GRT DL ++ + +E + IA+MGC+VNGPGE +AD+
Sbjct: 271 GRTEIDLISLAKTVEKEFAKEKRNIKIAVMGCVVNGPGEAREADY 315
>gi|257439600|ref|ZP_05615355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii A2-165]
gi|257197967|gb|EEU96251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii A2-165]
Length = 348
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 151/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ R V +GNV IG +PI VQTM +D+ G V + R G ++R+T
Sbjct: 1 MRQLKREVKIGNVTIGGNNPIAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSAA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 61 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG P MVES
Sbjct: 108 ---DDRVKA-----------VVQACQQKNIPIRIGVNGGSLEKHILAKYGAPVPEAMVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 154 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 209 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 242
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Query: 594 AGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
+G +G +L++G+GD + L P ++ + +N+L+ E ++CP+CGR
Sbjct: 213 SGMGIGGMLLEGIGDTIRVSLAAEPEKEVE----AGYNILRAVGFPVAGPEVITCPTCGR 268
Query: 651 TLFDLQEISAEIREK-TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
T + EI+ E+ ++ + + +A+MGC+VNGPGE +AD G GG G+ L++
Sbjct: 269 TQYPCTEIANEVEKRLQGYKKSIKVAVMGCVVNGPGEAREADIGIAGGK-GEAVLFIHGQ 327
Query: 710 VVKR 713
+K+
Sbjct: 328 PIKK 331
>gi|304316869|ref|YP_003852014.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778371|gb|ADL68930.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 354
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 35/285 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ V +GN+ IG +PI VQ+MT DTKD+ TV ++ + + G D+VR+ V
Sbjct: 1 MRKKTKEVRIGNIYIGGNNPIAVQSMTNTDTKDIKKTVNQIRDLQNAGCDIVRVAVLDFE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K NIP+VADIHF +A+ + DKIR+NPGN
Sbjct: 61 AANAIKEIK-----KEINIPIVADIHFNYRLAIEAIKNGADKIRINPGNIGG-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + K G +R+G N GSL I++ YG + G+VES
Sbjct: 108 --------------EDKLKLVADAAKDSGIPIRVGVNSGSLEKDILNKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + K F++ + S+K SN + +++Y+L+ ++ +YPLH+GVTEAG
Sbjct: 154 ALKSVSLLEKCGFYDIVISLKTSNVPLTIESYKLISEKV-----NYPLHVGVTEAGTSCS 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
G +KS+IGIGTLL G+GDTIRVSLT P +E+ ++ L +LG+
Sbjct: 209 GTIKSSIGIGTLLYMGIGDTIRVSLTGNPLEEVKVGKQILKSLGL 253
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 563 FEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFL 622
++ +SE +N+P+ H+ I + +G LL G+GD + + G + +
Sbjct: 185 YKLISEK-VNYPL--HVGVTEAGTSCSGTIKSSIGIGTLLYMGIGDTIRVSLTGNPLEEV 241
Query: 623 RDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIV 681
+ +L+ + E +SCP+CGRT +L +++ ++ T+ + + IA+MGC V
Sbjct: 242 K-VGKQILKSLGLSKGGVEIISCPTCGRTKINLIDLAKKVENATASIKEDIKIAVMGCAV 300
Query: 682 NGPGEMADAD 691
NGPGE +AD
Sbjct: 301 NGPGEAKEAD 310
>gi|206900497|ref|YP_002250512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dictyoglomus
thermophilum H-6-12]
gi|206739600|gb|ACI18658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dictyoglomus
thermophilum H-6-12]
Length = 355
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 34/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V VGN+AIG ++PIRVQ+MT T D+ TV ++ R+A +G +++R+ V K
Sbjct: 3 RKKTRVVKVGNIAIGGDNPIRVQSMTKTPTVDIKSTVRQIKRLAKKGCEIIRLGVPDKES 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK K IP+VADIHF +AL E DK+R+NPGN + +
Sbjct: 63 ALALGKIK-----KASPIPIVADIHFDYRLALIALEQGVDKLRLNPGNIKNPK------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
S + ++ K G +R+G+N GSL I+ Y G +P +VESA
Sbjct: 111 ---------------YISLIAKEAKARGVPIRVGSNAGSLPKEILEKYNGLTPEALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
R+ DF + + S+KAS+ + V+AYRLL ++ DYPLH+G+TE+G G
Sbjct: 156 LHEVRLLEDNDFTDIVISVKASSVPLTVEAYRLLSQKV-----DYPLHIGITESGTVFPG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
++S++G+G LL +G+GDTIRVSL P+KE++
Sbjct: 211 TIRSSVGLGILLYEGIGDTIRVSLASSPDKEVE 243
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +G LL +G+GD + L +P ++ + ++ +L +R ++CP C
Sbjct: 212 IRSSVGLGILLYEGIGDTIRVSLASSPDKEVE----VAYEILDSLELRRKGIRVIACPMC 267
Query: 649 GRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
R+ F +Q+++ EI K + P + +A+MGC VNGPGE AD G G I G
Sbjct: 268 ARSHFPVQQVAKEIERKFKNYPLNLVVAVMGCEVNGPGEAKWADIGITGSKDRVIIFRKG 327
Query: 708 KTV 710
K +
Sbjct: 328 KII 330
>gi|420416947|ref|ZP_14916053.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4044]
gi|393035219|gb|EJB36265.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4044]
Length = 359
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VA+G + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAVGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|331001985|ref|ZP_08325505.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330411781|gb|EGG91186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 352
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 170/297 (57%), Gaps = 37/297 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ V +G+ IG+ PI +Q+M T++V TVE+++R+ D G D++R+ V
Sbjct: 1 MRKKTKLVQIGDKQIGAGLPILIQSMCNTKTENVKSTVEQILRLEDAGCDIIRVAVPNTE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQ 201
A A +IK K +IPLVADIHF +AL A C DKIR+NPGN
Sbjct: 61 AASAIAQIK-----KQIHIPLVADIHFDYRLALEAIKAGC-DKIRINPGNIGST------ 108
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVE 260
E +V+ C++ +R+G N GSL ++ YG S G+VE
Sbjct: 109 ----------------ERIKAVVDACRERNLPIRVGVNSGSLEKHLIEKYGGVSAEGIVE 152
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA + RI +D++N + S+K+S+ ++ V+A+ L+ + DYPLH+G+TE+G +
Sbjct: 153 SALDKVRIIEYMDYNNMVISIKSSDVMMCVKAHELISEK-----TDYPLHIGITESGTVK 207
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDTIRVSLT P +EI + L+NLG++ + ++ P
Sbjct: 208 RGMIKSSLGLGIILYQGIGDTIRVSLTGDPVEEIFAGKLILSNLGLKKSGIEVVSCP 264
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
V + E +SE ++P+ I + R +I + +G +L G+GD + +
Sbjct: 178 VMMCVKAHELISEKT-DYPLHIGITESGTVKRG--MIKSSLGLGIILYQGIGDTIRVSLT 234
Query: 616 GQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSI 674
G + + +L ++ + E VSCP+CGRT DL ++ ++ + + +
Sbjct: 235 GDPVEEIFAGKL-ILSNLGLKKSGIEVVSCPTCGRTNIDLIGLAGKVEKLVEDYDLNIKV 293
Query: 675 AIMGCIVNGPGEMADAD 691
A+MGC+VNGPGE +AD
Sbjct: 294 AVMGCVVNGPGEAKEAD 310
>gi|336431235|ref|ZP_08611089.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 2_1_58FAA]
gi|336020157|gb|EGN49874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 2_1_58FAA]
Length = 353
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ + +GNV IG HP+ +Q+MT T+DVA TVE+++ + + G +++R V
Sbjct: 4 LRNRTKEIRIGNVWIGGSHPVAIQSMTNTKTEDVAATVEQILALEEAGCEIIRCAVPTME 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN +
Sbjct: 64 AALALKEIK-----KQIHIPLVADIHFDYRLAIAAIENGADKIRINPGNIGSK------- 111
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +VEK K+Y +R+G N GSL ++ YG + G+VES
Sbjct: 112 ---------------ERVQAVVEKAKEYNVPIRVGVNSGSLEKNLLEKYGGVTAEGIVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ ++ + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 157 ALDKVRMIEEMGYDNLVVSIKSSDVLMCVRAHELIAEKC-----QYPLHVGITESGTVYS 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LGMR ++ P
Sbjct: 212 GNIKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKLILKTLGMRKGGIEVVSCP 267
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L +G+G+ + + G + +R +L+ MR E VSCP+CGRT
Sbjct: 214 IKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKL-ILKTLGMRKGGIEVVSCPTCGRT 272
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 273 RIDLIALANQVEKMVQDIDLDIKVAVMGCVVNGPGEAKEAD 313
>gi|384899067|ref|YP_005774446.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F30]
gi|317179010|dbj|BAJ56798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F30]
Length = 359
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|347542458|ref|YP_004857095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985494|dbj|BAK81169.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 349
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 152/266 (57%), Gaps = 34/266 (12%)
Query: 91 VMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFE 150
V +GN+ IG +PI +Q+MT +TKD+ T+ ++ + +G D+VRI V +E +
Sbjct: 9 VNIGNIKIGGCNPIAIQSMTNTNTKDINATINQINSLEKEGCDIVRIAVTDNQEVECIPT 68
Query: 151 IKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTDDEY 209
IK KN NIPLVADI F +AL + DK+R+NPGN +
Sbjct: 69 IK-----KNTNIPLVADIQFDYKIALGCIKNGIDKVRINPGNIGN--------------- 108
Query: 210 QKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARI 268
E+ +V C +YG +RIG N GSL I+S YG + +VES + +
Sbjct: 109 -------EDKVREVVNACDEYGIPIRIGVNGGSLQKDILSKYGRKTTDALVESVLKNVDL 161
Query: 269 CRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAI 328
K F N + S+K+S+ +M+++Y+ + +E+ +YPLHLGVTEAG G +KS+I
Sbjct: 162 LEKFRFKNIVISVKSSDVDMMIESYKKISSEV-----NYPLHLGVTEAGLFLSGAVKSSI 216
Query: 329 GIGTLLQDGLGDTIRVSLTEPPEKEI 354
GIGTLL +G+GDTIRVSLT+ P EI
Sbjct: 217 GIGTLLHNGIGDTIRVSLTDDPVNEI 242
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + + +R + +L+ + N +SCP+C RT F+L +
Sbjct: 218 IGTLLHNGIGDTIRVSLTDDPVNEIR-VAKEILKSLNIYNKGVNLISCPTCSRTKFNLID 276
Query: 658 ISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGG 697
++ ++ + T + ++IA+MGC VNGPGE +AD G GG
Sbjct: 277 LANKVEQLTKEIDKNITIAVMGCAVNGPGEAREADIGVAGG 317
>gi|323356834|ref|YP_004223230.1| hypothetical protein MTES_0386 [Microbacterium testaceum StLB037]
gi|323273205|dbj|BAJ73350.1| enzyme [Microbacterium testaceum StLB037]
Length = 380
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 162/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +G + P+ VQ+MTT T ++ T++++ + G ++VR+ V + +
Sbjct: 15 RRKTRQIKVGKVLVGGDAPVSVQSMTTTPTTNINATLQQIAELTASGCEIVRVAVPSQDD 74
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
AD ++ K IP++ADIHF P + A C +RVNPGN
Sbjct: 75 ADVLH-----IIAKKSQIPVIADIHFQPKYVFQAIDAGC-GAVRVNPGN----------- 117
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 118 ----------IRKFDDQVGAIAKAAKDAGVSLRIGVNAGSLDRRLLEKYGKATPEALVES 167
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++P+VMV+AYRLL D+PLHLGVTEAG
Sbjct: 168 AVWEASLFEEHDFHDFKISVKHNDPIVMVKAYRLLAER-----GDWPLHLGVTEAGPAFQ 222
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
G +KSA G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+
Sbjct: 223 GTIKSATAFGILLSEGIGDTIRVSLSAPPAEEVKVGHQILQSLNLRERKLE 273
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T G LL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 225 IKSATAFGILLSEGIGDTIRVSLSAPPAEEVK-VGHQILQSLNLRERKLEIVSCPSCGRA 283
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
D+ ++ ++ E K +P + +A+MGC+VNGPGE DAD G G GK ++V
Sbjct: 284 QVDVYTLADDVTEGLKDMTVP-LRVAVMGCVVNGPGEARDADLGVASGN-GKGQIFVKGE 341
Query: 710 VVK 712
V+K
Sbjct: 342 VIK 344
>gi|217032002|ref|ZP_03437503.1| hypothetical protein HPB128_187g29 [Helicobacter pylori B128]
gi|298736319|ref|YP_003728845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B8]
gi|216946312|gb|EEC24918.1| hypothetical protein HPB128_187g29 [Helicobacter pylori B128]
gi|298355509|emb|CBI66381.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B8]
Length = 359
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNHSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|308182786|ref|YP_003926913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan4]
gi|308064971|gb|ADO06863.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan4]
Length = 359
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNVPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|145224661|ref|YP_001135339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum PYR-GCK]
gi|315444991|ref|YP_004077870.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum Spyr1]
gi|145217147|gb|ABP46551.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum PYR-GCK]
gi|315263294|gb|ADU00036.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum Spyr1]
Length = 391
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 168/326 (51%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HPI VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGDVGVGSDHPIAVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA I K NIP++ADIHF P A C +RVNPGN
Sbjct: 82 ADALPAIA-----KKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 126 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRILKKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV AY L A+ DYPLHLGVTEAG
Sbjct: 175 AMWEASLFEEHGFGDIKISVKHNDPVIMVAAYEQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R L+ +
Sbjct: 230 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEVKVGNQILESLNLRPRGLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGLEVPLR 313
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 239 GALLSKGIGDTIRVSLSAPPAEEVK-VGNQILESLNLRPRGLEIVSCPSCGRAQVDVYTL 297
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 298 ANEV---TAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 351
>gi|384891005|ref|YP_005765138.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 908]
gi|385223677|ref|YP_005783603.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2017]
gi|385231528|ref|YP_005791447.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2018]
gi|307637314|gb|ADN79764.1| 1-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthase [Helicobacter
pylori 908]
gi|325995905|gb|ADZ51310.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2018]
gi|325997499|gb|ADZ49707.1| 1-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthase [Helicobacter
pylori 2017]
Length = 359
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A+ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKFLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|395775841|ref|ZP_10456356.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
acidiscabies 84-104]
Length = 385
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFSAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVRE-----------IAKAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L A+ +YPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAAQ-----CEYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ ++ E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEVK-VGNQILESLNLKQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLTGMDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|294785872|ref|ZP_06751160.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_27]
gi|294487586|gb|EFG34948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_27]
Length = 346
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALLVDG+GD L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 211 IKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 266
Query: 649 GRTLFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
GRT DL +++ E R K + IA+MGC+VNGPGE +AD+G G
Sbjct: 267 GRTEIDLIGLAKQVEEEFRTKKNKF---KIAVMGCVVNGPGEAREADYGIAAG 316
>gi|262202053|ref|YP_003273261.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
bronchialis DSM 43247]
gi|262085400|gb|ACY21368.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
bronchialis DSM 43247]
Length = 394
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 169/326 (51%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 26 RRTTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 86 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 129
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 130 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRLMQKYGKATPEALVES 178
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 179 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 233
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G LL G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 234 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 291
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + + EG EV R
Sbjct: 292 GRAQVDVYKLADAVTAGLEGMEVPLR 317
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 243 GALLSQGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 299
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ + T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 300 KLADAV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 355
>gi|424862913|ref|ZP_18286826.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR86 cluster
bacterium SAR86A]
gi|400757534|gb|EJP71745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR86 cluster
bacterium SAR86A]
Length = 368
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 154/271 (56%), Gaps = 33/271 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT+T+MVG+V +G ++PI +Q+MT DT DV TV+++ + GAD+VR++V G E
Sbjct: 8 RKKTKTIMVGSVPVGGDNPISIQSMTNTDTCDVVSTVKQIKDLELAGADIVRVSVPGYEE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A EIK K N+PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AKAFKEIK-----KAVNVPLVADIHFDYKIALEVADTADCLRINPGNIGKE--------- 113
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
++EV + + +R+G N GSL + YG+ + +VESA
Sbjct: 114 ---------DRVKEVINAATDN----NVPIRVGVNAGSLEKDLQKKYGEPNADALVESAL 160
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
I + +F N+ S+KASN + V AYR V+++ PLHLG+TEAG G
Sbjct: 161 RHVEILDRFNFENYKMSLKASNIEMTVDAYR-KVSDLIKQ----PLHLGITEAGSFRAGT 215
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDTIR+SL P EI
Sbjct: 216 VKSSIGVGMLLSEGIGDTIRISLASDPVDEI 246
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + VG LL +G+GD + + D ++ +++L+ +R+ + ++CPSC R
Sbjct: 216 VKSSIGVGMLLSEGIGDTIRISLASDPVDEIK-VGWDILKSLNIRSRGVKIIACPSCSRQ 274
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
F++ ++ E+ ++ + + +AI+GC VNGPGE A+ G G +P + LYV
Sbjct: 275 NFNVIKVVNELEQRLEDISEDIEVAIIGCYVNGPGESKAANIGLTGASPKNL-LYV 329
>gi|420504267|ref|ZP_15002794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-62]
gi|393154679|gb|EJC54960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-62]
Length = 359
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RFKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|392547030|ref|ZP_10294167.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas rubra ATCC 29570]
Length = 372
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT +T DV TV ++ IAD GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTNTLDVDATVAQIRAIADAGADIVRVSVPTMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AEAFKSIK-----EQSEIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGN--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ + +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDAARDKNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I ++LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVEILQRLDFDQFKVSVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRAG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +E+
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEV 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD L + ++ F++L+ R+R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTLRVSLAADPVQEVK-VGFDILKSLRIRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD+ ++ E+ + +S++++GC+VNGPGE +D G + GA + LY+
Sbjct: 277 EFDVVNTMNQLEERLEDITAPISVSVIGCVVNGPGEALVSDLG-LAGANRRSGLYI 331
>gi|209965913|ref|YP_002298828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Rhodospirillum centenum SW]
gi|209959379|gb|ACJ00016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Rhodospirillum centenum SW]
Length = 377
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 159/287 (55%), Gaps = 39/287 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG + +G + PI VQTMT T D T+E++ R+ + GAD+VR++ +
Sbjct: 13 RRKSRQIMVGTMPVGGDAPISVQTMTNTVTADAKATIEQIRRVEEAGADIVRVSCPDQES 72
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF--ADRRAQFEQ 201
+A EI K IP+VADIHF A+ AE +R+NPGN ADR A+
Sbjct: 73 TEALKEI-----VKAARIPIVADIHFHYRRAIEAAEAGASCLRINPGNIGSADRVAE--- 124
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVE 260
+V+ K +G ++RIG N GSL ++ YG+ P +VE
Sbjct: 125 ---------------------VVKAAKDHGCSIRIGVNAGSLEQSLLEKYGEPCPEALVE 163
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA + ARI DF NF S+KAS+ + V AY+ L DYPLH+G+TEAG
Sbjct: 164 SAMDHARILEDHDFRNFKISVKASDVFLAVAAYQGLA-----EACDYPLHIGITEAGGLR 218
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
G +KS+IG+G LL G+GDTIRVSL+ P +E+ L +LG+R
Sbjct: 219 AGTVKSSIGLGMLLWSGIGDTIRVSLSADPVEEVKVAYEMLKSLGLR 265
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 9/176 (5%)
Query: 537 IDATMILHDLPFNEDKIGRVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVI 592
+D IL D F KI V+A+ + L ++P+ I G+ +
Sbjct: 166 MDHARILEDHDFRNFKIS-VKASDVFLAVAAYQGLAEACDYPLHIGITEAGGLRAG--TV 222
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+ +G LL G+GD + + + ++ ++ +L+ +R +SCPSC R
Sbjct: 223 KSSIGLGMLLWSGIGDTIRVSLSADPVEEVK-VAYEMLKSLGLRRRGVTVISCPSCARQR 281
Query: 653 FDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
FD+ + + E+ SH+ ++++++GC+VNGPGE D G+ GG G +Y+G
Sbjct: 282 FDVIKTVEVLEERLSHITTPLTVSVIGCVVNGPGEATMTDIGFTGGGKGTHQVYLG 337
>gi|152965397|ref|YP_001361181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kineococcus
radiotolerans SRS30216]
gi|151359914|gb|ABS02917.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Kineococcus radiotolerans SRS30216]
Length = 386
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 162/290 (55%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +G + P+ VQ+MTT T ++ T++++ + G D+VR+ +
Sbjct: 18 RRKTRKIKVGSVDVGGDAPVSVQSMTTTPTTNINATLQQIAELTATGCDIVRVACPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDPRLLAKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLSER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLE 276
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E LSE ++P+ H+ I + T GALL G+GD + + +
Sbjct: 200 RAYELLSERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +LQ +R K E VSCPSCGR D+ ++ + T L G+S+ A+
Sbjct: 257 EVK-VGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEAV---TEGLEGMSVPLRVAV 312
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 313 MGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIK 347
>gi|77460822|ref|YP_350329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Pf0-1]
gi|398978323|ref|ZP_10687698.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM25]
gi|123603393|sp|Q3K7B6.1|ISPG_PSEPF RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|77384825|gb|ABA76338.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens Pf0-1]
gi|398137123|gb|EJM26189.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM25]
Length = 369
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|421714881|ref|ZP_16154199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R036d]
gi|407215735|gb|EKE85573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R036d]
Length = 359
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++ + ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASRVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|302537251|ref|ZP_07289593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. C]
gi|302446146|gb|EFL17962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. C]
Length = 385
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRVSRKIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
D+ KE+ H K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ----DDKVKEIAH----------AAKDAGTPIRIGVNAGSLDARLLKKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 9/118 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +L+ ++ + E VSCPSCGR D+ ++
Sbjct: 235 GALLSEGIGDTIRVSLSAPPVEEVK-VGNQILESLNLKPRRLEIVSCPSCGRAQVDVYKL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+ E+ T+ L G+++ A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 AEEV---TAGLDGMTVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|208434546|ref|YP_002266212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori G27]
gi|254779386|ref|YP_003057491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B38]
gi|308184411|ref|YP_003928544.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SJM180]
gi|383749704|ref|YP_005424807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori ELS37]
gi|384897336|ref|YP_005772764.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Lithuania75]
gi|420413577|ref|ZP_14912701.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4099]
gi|420448642|ref|ZP_14947522.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-44]
gi|420456956|ref|ZP_14955775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-16]
gi|420458463|ref|ZP_14957273.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-26]
gi|420464076|ref|ZP_14962851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-4]
gi|420472209|ref|ZP_14970902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-18]
gi|420480658|ref|ZP_14979301.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1]
gi|420483972|ref|ZP_14982598.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3]
gi|420487321|ref|ZP_14985925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8]
gi|420502842|ref|ZP_15001378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-41]
gi|420511156|ref|ZP_15009643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1b]
gi|420514242|ref|ZP_15012715.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3b]
gi|420521104|ref|ZP_15019535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8b]
gi|420531114|ref|ZP_15029489.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-28b]
gi|421710126|ref|ZP_16149483.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R018c]
gi|421723404|ref|ZP_16162658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R056a]
gi|425432891|ref|ZP_18813431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori GAM100Ai]
gi|226741014|sp|B5Z6Z7.1|ISPG_HELPG RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|208432475|gb|ACI27346.1| 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphate synthetase
[Helicobacter pylori G27]
gi|254001297|emb|CAX29276.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori B38]
gi|308060331|gb|ADO02227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SJM180]
gi|317012441|gb|ADU83049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Lithuania75]
gi|380874450|gb|AFF20231.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori ELS37]
gi|393029564|gb|EJB30645.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4099]
gi|393065996|gb|EJB66824.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-44]
gi|393074354|gb|EJB75114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-16]
gi|393075984|gb|EJB76738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-26]
gi|393078518|gb|EJB79258.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-4]
gi|393089026|gb|EJB89667.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-18]
gi|393096674|gb|EJB97271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1]
gi|393100839|gb|EJC01412.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3]
gi|393101898|gb|EJC02464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8]
gi|393119640|gb|EJC20130.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1b]
gi|393127691|gb|EJC28136.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8b]
gi|393139140|gb|EJC39521.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-28b]
gi|393150714|gb|EJC51019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-41]
gi|393158705|gb|EJC58965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3b]
gi|407210317|gb|EKE80196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R018c]
gi|407224427|gb|EKE94203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R056a]
gi|410714558|gb|EKQ72025.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori GAM100Ai]
Length = 359
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|421716710|ref|ZP_16156019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R037c]
gi|407219931|gb|EKE89742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R037c]
Length = 359
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ H+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLIHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|421718246|ref|ZP_16157545.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R038b]
gi|407221512|gb|EKE91316.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R038b]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVV-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420401601|ref|ZP_14900794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6081]
gi|393019063|gb|EJB20208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6081]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ + +L+ +SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIK-VARAILRHSGCLKEGINLISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|289767668|ref|ZP_06527046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
gi|289697867|gb|EFD65296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
Length = 384
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VA+G P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRVSRRIQVGPVAVGGGAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 126 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +EI + L +LG+R L+ +
Sbjct: 228 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEIKVGIQILQSLGLRERRLE--IVSCPSCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLAEEVTAGLEGMEVPLR 310
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +LQ +R + E VSCPSCGR
Sbjct: 229 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEIK-VGIQILQSLGLRERRLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVK 712
VVK
Sbjct: 344 GEVVK 348
>gi|386748147|ref|YP_006221355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 99-5656]
gi|384554389|gb|AFI06145.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 99-5656]
Length = 357
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +GNVAIG + I VQ+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKRIFIGNVAIGGDAKISVQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL +E D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIASESVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +++ CK+ +RIG N GSL + YG +P+GM+ESA
Sbjct: 111 -------------DKIKAVIDACKEKNIPIRIGVNAGSLEKQFDQKYGATPKGMIESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ DF NF S+KAS+ +QAYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDFDFTNFKISLKASDVERTMQAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 542 ILHDLPFNEDKIG-------RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
+L D F KI R A R+ L +N+P H+ + I +
Sbjct: 161 LLEDFDFTNFKISLKASDVERTMQAYRMLRPL----VNYP--FHLGVTEAGNLFSSSIKS 214
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFD 654
+G LL++G+GD + + G+ + ++ L R++ +SCP+CGR +
Sbjct: 215 AMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRIEAN 273
Query: 655 LQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
L E++ ++ ++ SH+ + I++MGC+VN GE AD G + + GK + K
Sbjct: 274 LVEMTNKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVIHK 332
>gi|338813323|ref|ZP_08625452.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Acetonema
longum DSM 6540]
gi|337274682|gb|EGO63190.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Acetonema
longum DSM 6540]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 158/287 (55%), Gaps = 36/287 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR + +G V IG PI VQ+MT T ++ TVE++ R+ + G D+VRI +
Sbjct: 3 LRRDTRPIYIGKVGIGGHMPISVQSMTNTKTTNIPATVEQIHRLTEAGCDIVRIAIPDMA 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A +KNS+ ++PLVADIHF +A+ V E D +R+NPGN D
Sbjct: 63 AAQAVESLKNSV-----SVPLVADIHFDYRLAIAVLERGIDALRINPGNIGDPSG----- 112
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVE 260
+V + +K +RIG N GSL ++++ YG +P MVE
Sbjct: 113 -----------------VRAVVTEAQKRRVPIRIGVNAGSLDKKLLAKYGGHPTPEAMVE 155
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA E +I +LDF + S+KA++ ++AY L+ + +YPLHLG+TEAG
Sbjct: 156 SALEHIKILEELDFFDIKISLKANDVPTTIRAYTLMSEQ-----ANYPLHLGITEAGTIS 210
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
G +KSA+GIG LL G+GDTIRVSLT P +E+ L +LG+R
Sbjct: 211 SGVIKSAVGIGALLAQGIGDTIRVSLTGDPVEEVKVASEILKSLGLR 257
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + E ++IL+++D I L N+ V R + +SE N+P+ H+
Sbjct: 155 ESALEHIKILEELDFFDIKISLKAND-----VPTTIRAYTLMSEQA-NYPL--HLGITEA 206
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
VI + +GALL G+GD + + G + ++ S +L+ +R VS
Sbjct: 207 GTISSGVIKSAVGIGALLAQGIGDTIRVSLTGDPVEEVKVAS-EILKSLGLRQYGPTLVS 265
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGG 697
CP+CGR +L I+ ++ +K + + +A+MGC+VNGPGE +AD G GG
Sbjct: 266 CPTCGRCNINLVNIANQVEQKLRDIKKPIKVAVMGCVVNGPGEAREADIGIAGG 319
>gi|152995385|ref|YP_001340220.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinomonas sp. MWYL1]
gi|189045789|sp|A6VV06.1|ISPG_MARMS RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|150836309|gb|ABR70285.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinomonas sp. MWYL1]
Length = 370
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R +MVGNV +G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRHSRQIMVGNVPVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ ++ +IPLVADIHF +AL+VAE D +R+NPGN ++
Sbjct: 69 AEAFKKIREAV-----SIPLVADIHFDYKIALKVAEYGVDCLRINPGNIGNK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------DRIRAVVDCARDKNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F + +LDFH + S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIQYFDELDFHEYKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTLRVSLAADPVHEI 248
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD L + ++ +++L+ ++RN +++CPSC R
Sbjct: 218 VKSSIGLGLLLMDGIGDTLRVSLAADPVHEIK-VGWDMLRSLKLRNRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
FD+ + E+ E+ + + +A++GC+VNGPGE +AD G GG+P + GK
Sbjct: 277 NFDVIKTMNELEERLDDITIPMDVAVIGCVVNGPGEAKEADIGLAGGSPNNLIYQDGK 334
>gi|420479187|ref|ZP_14977836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-34]
gi|393095429|gb|EJB96033.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-34]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKTVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|444432090|ref|ZP_21227249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia soli
NBRC 108243]
gi|443886919|dbj|GAC68970.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia soli
NBRC 108243]
Length = 400
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 32 RRTTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 92 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNIKEFDGRVKEV 145
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
K G +RIG N GSL R++ YG +P +VES
Sbjct: 146 ALA---------------------AKDAGIPIRIGVNAGSLDPRLLKKYGKATPEALVES 184
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 185 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 239
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 240 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 297
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 298 GRAQVDVYKLADEVTAGLEGMEVPLR 323
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 249 GALLSQGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 305
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 306 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 361
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 362 T-VPEAQIVETLIE 374
>gi|410658720|ref|YP_006911091.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. DCA]
gi|410661709|ref|YP_006914080.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. CF]
gi|409021075|gb|AFV03106.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. DCA]
gi|409024065|gb|AFV06095.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. CF]
Length = 356
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 38/291 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V +G+VAIG HP+ +Q+MT DT+DV T+ ++ +A+ G +++R+ V ++
Sbjct: 3 RRITREVKIGSVAIGGNHPVVIQSMTNTDTRDVQATLSQIRHLAEIGCEIIRMAVLNEQA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A A +I + IP+VADIHF +AL+ VA +R+NPGN +R
Sbjct: 63 ALALKDICSL-----SPIPVVADIHFDYRLALKAVANGVHGLRINPGNIGER-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++E+ + + E+ +RIG N GSL I+ YG + GMVESA
Sbjct: 110 ----------WKVQEIINAVRER----NIPIRIGVNTGSLEKEILEKYGGPTAEGMVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + ++HN S+K+S+ +M+ AYR M H DYPLH+GVTEAG G
Sbjct: 156 LGHVGILEQENYHNIKISLKSSHVPLMIDAYR-----MIAHRVDYPLHVGVTEAGTVRSG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
+KSAIGIGTLL +G+GDTIRVSLT P EI +++ +R +L++G
Sbjct: 211 VVKSAIGIGTLLAEGIGDTIRVSLTGDPAAEIPVAQQI----LRVLDLKKG 257
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGR 650
V+ + +G LL +G+GD + + G + + +L+ ++ E +SCP+CGR
Sbjct: 211 VVKSAIGIGTLLAEGIGDTIRVSLTGDPAAEI-PVAQQILRVLDLKKGGFELISCPTCGR 269
Query: 651 TLFDLQEISAEIREKTSHLPG----VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
T DL ++ E+ ++ LP VSIA+MGC+VNGPGE +ADFG GG +
Sbjct: 270 TQVDLVHLAEEVEQRLEALPAPSKRVSIAVMGCVVNGPGEAREADFGIAGGKSRGLLFAR 329
Query: 707 GKTVVKRGIAMEQATDALIQLIKD 730
G+ + + + ++ AL++ I+D
Sbjct: 330 GEVIAQ--LPEDELVSALMEKIED 351
>gi|404214645|ref|YP_006668840.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
sp. KTR9]
gi|403645444|gb|AFR48684.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
sp. KTR9]
Length = 395
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQFFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAA-----ACDYPLHLGVTEAGPSFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLEIVSCP--SC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
GALL +G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GALLSEGIGDTIRVSLSAPPAEEIKVGD---QILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
Query: 713 RGIAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 T-VPEAQIVETLIE 369
>gi|220912186|ref|YP_002487495.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
chlorophenolicus A6]
gi|254806862|sp|B8HG44.1|ISPG_ARTCA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|219859064|gb|ACL39406.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrobacter chlorophenolicus A6]
Length = 388
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 IKSATAFGALLSRGIGDTIRVSLSAPPVEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 288 QVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 343
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 344 GEVIKT-VPESQIVETLIE 361
>gi|441509968|ref|ZP_20991880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
aichiensis NBRC 108223]
gi|441445983|dbj|GAC49841.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
aichiensis NBRC 108223]
Length = 394
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G+LL G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 235 GTIKSSVAFGSLLSQGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + + EG EV R
Sbjct: 293 GRAQVDVYKLADAVTAGLEGMEVPLR 318
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
G+LL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GSLLSQGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ + T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADAV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
>gi|374605363|ref|ZP_09678294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
dendritiformis C454]
gi|374389038|gb|EHQ60429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
dendritiformis C454]
Length = 365
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR V VGNV IG + + +Q+M T T DV TV E+ R+ + G +VR+TV +
Sbjct: 3 LRHQTRPVQVGNVTIGGSNDVIIQSMCTTKTADVQATVAEIHRLEEAGCQIVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AAEAIKEIK-----KQISIPLVADIHFDYRLALKAIENGIDKVRINPGNIG-RRHKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVQACKERGIPIRIGVNAGSLEHHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+RVSL+ P +E+ R L
Sbjct: 211 GTIKSAAGLGALLSLGIGSTVRVSLSADPVEEVKVAREL 249
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALL G+G + L P ++ R+ LL+ + + VSCP+C
Sbjct: 213 IKSAAGLGALLSLGIGSTVRVSLSADPVEEVKVARE----LLKSFGLISNAATLVSCPTC 268
Query: 649 GRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
GR DL I+ E+ E S + + ++++GC VNGPGE +AD G G
Sbjct: 269 GRLDIDLFSIANEVEEYISKIKVPIKVSVLGCAVNGPGEAREADIGIAGA 318
>gi|222151449|ref|YP_002560605.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
gi|254806881|sp|B9E6U1.1|ISPG_MACCJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|222120574|dbj|BAH17909.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
Length = 371
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVACPKE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A EIK K NIPLV DIHF +AL E DKIR+NPGN R
Sbjct: 65 EDALAIAEIK-----KQINIPLVVDIHFDYKLALLAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ +EEV V+ CK G +RIG N GSL I+ YG + GMVE
Sbjct: 114 ------------EKVEEV----VKACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAYT-----KAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G ++ G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAIMSLGIGNTLRISLSADPVEEVKVAREL 252
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GA++ G+G+ L + + ++ + LL+ + + +SCP+CGR
Sbjct: 216 VKSAAGLGAIMSLGIGNTLRISLSADPVEEVK-VARELLKSFGLASNAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKT 709
DL I+ E+ E S + + +A++GC VNGPGE +AD G + GA G+ L++ GKT
Sbjct: 275 EIDLISIANEVEEYISTIKAPLKVAVLGCAVNGPGEAREADIG-IAGARGEGLLFMKGKT 333
Query: 710 VVK 712
V K
Sbjct: 334 VRK 336
>gi|407363606|ref|ZP_11110138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mandelii JR-1]
Length = 369
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|222529792|ref|YP_002573674.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor bescii DSM 6725]
gi|222456639|gb|ACM60901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor bescii DSM 6725]
Length = 348
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 162/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ V +GN+ IG PIR+Q+MT TKDV TVE+++ + G D++R+ V A A
Sbjct: 5 TKKVRIGNLYIGGGEPIRIQSMTNTKTKDVEATVEQILSLESLGCDIIRVAVPDLDSAKA 64
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN + R E
Sbjct: 65 ISKIKSRI-----HIPLVADIHFDYKLALEAIYNGADKIRINPGNIGNERKVQE------ 113
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
+ ++ K+YG AVR+G N GSL D + Y P +VE+A
Sbjct: 114 ----------------IAKEAKRYGIAVRVGANSGSLPKDILQKYKSPVPEAIVEAAIYQ 157
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K DF N + S+K+S+ + +++Y E+ +YPLH+G+TEAG G +K
Sbjct: 158 VKLLEKFDFDNIVVSVKSSDVLTTIKSY-----EILSQNLNYPLHVGLTEAGTFVAGTVK 212
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ L++GV
Sbjct: 213 SSIAIGYLLLRGIGDTIRVSLTDSPEKEVIVAKEI----LKSLNLRKGV 257
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 563 FEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDF 619
+E LS+N LN+P+ H+ + + +G LL+ G+GD + L ++P ++
Sbjct: 185 YEILSQN-LNYPL--HVGLTEAGTFVAGTVKSSIAIGYLLLRGIGDTIRVSLTDSPEKEV 241
Query: 620 DFLRDT--SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAI 676
++ S NL +G ++ VSCP+C R DL +I+ E+ ++ +L +++AI
Sbjct: 242 IVAKEILKSLNLRKGVKI-------VSCPTCARCNVDLLKIADEVEKRIQNLDLDITVAI 294
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
MGC VNGPGE +AD G G + GK + R + + D L++ I
Sbjct: 295 MGCAVNGPGEAKEADVGVACGVGEGLLFKKGKII--RKVKENEIVDELVKEI 344
>gi|330807647|ref|YP_004352109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|378948959|ref|YP_005206447.1| protein GcpE [Pseudomonas fluorescens F113]
gi|398874322|ref|ZP_10629533.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM74]
gi|398893850|ref|ZP_10646359.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM55]
gi|398911101|ref|ZP_10655362.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM49]
gi|398924363|ref|ZP_10661152.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM48]
gi|398952435|ref|ZP_10674783.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM33]
gi|399003837|ref|ZP_10706486.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM18]
gi|423097171|ref|ZP_17084967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q2-87]
gi|423695455|ref|ZP_17669945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q8r1-96]
gi|426407852|ref|YP_007027951.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. UW4]
gi|327375755|gb|AEA67105.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase,
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359758973|gb|AEV61052.1| GcpE [Pseudomonas fluorescens F113]
gi|388009011|gb|EIK70262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q8r1-96]
gi|397888019|gb|EJL04502.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q2-87]
gi|398121581|gb|EJM11204.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM18]
gi|398155189|gb|EJM43643.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM33]
gi|398173488|gb|EJM61322.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM48]
gi|398183472|gb|EJM70955.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM55]
gi|398184711|gb|EJM72147.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM49]
gi|398195391|gb|EJM82438.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM74]
gi|426266069|gb|AFY18146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. UW4]
Length = 369
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|405981541|ref|ZP_11039868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
neuii BVS029A5]
gi|404392465|gb|EJZ87525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
neuii BVS029A5]
Length = 383
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 158/291 (54%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V +GN+ +G + P+ VQ+M T T D+ GT++++ + G D+VR+ +
Sbjct: 20 RKKTRKVRLGNLWVGGDAPVTVQSMCTTKTTDIGGTLQQIAELTAAGCDIVRVACPSADD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE--CFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K NIP++ADIHF P E C +RVNPGN Q E +
Sbjct: 80 AEAL-----PIIAKKSNIPVIADIHFQPRYVFAAIEGGCAG-VRVNPGNIRKFDDQIEDI 133
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
V+ + +G ++RIG N GSL ++ YG +P MVES
Sbjct: 134 ---------------------VKAARDHGTSLRIGVNAGSLHPKLYKKYGGATPEAMVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +PV M++ Y LL ++ D+PLHLGVTEAG
Sbjct: 173 AVWEASLFEQYDFHDFAISVKHHDPVTMIKTYELLSSK-----GDWPLHLGVTEAGPALQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KSA G LL+ G+GDTIRVSL+ PP +E+ L +LG+R L+
Sbjct: 228 GTVKSATAFGALLRQGIGDTIRVSLSAPPVEEVKVGVEILQSLGLRDRTLE 278
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + T GALL G+GD + + + ++ +LQ +R+ E VSCPSCGR
Sbjct: 230 VKSATAFGALLRQGIGDTIRVSLSAPPVEEVK-VGVEILQSLGLRDRTLEIVSCPSCGRA 288
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
D+ ++ + E K +P + +A+MGC+VNGPGE +AD G G
Sbjct: 289 QVDVYTLANAVTEGLKDLKVP-LRVAVMGCVVNGPGEAREADLGVASG 335
>gi|456388505|gb|EMF53945.1| gcpE protein [Streptomyces bottropensis ATCC 25435]
Length = 378
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IAQAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 220 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEI 251
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ ++ + E VSCPSCGR
Sbjct: 221 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGNQILESLNLKPRRLEIVSCPSCGRA 279
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 280 QVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 335
Query: 708 KTVVK 712
V+K
Sbjct: 336 GEVIK 340
>gi|210134832|ref|YP_002301271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P12]
gi|226741013|sp|B6JLL3.1|ISPG_HELP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|210132800|gb|ACJ07791.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthetase
[Helicobacter pylori P12]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL R YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKRFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|90408605|ref|ZP_01216760.1| GcpE [Psychromonas sp. CNPT3]
gi|90310297|gb|EAS38427.1| GcpE [Psychromonas sp. CNPT3]
Length = 369
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR ++ +MVGNVA+G + PI VQ+MT T DV TV ++ R+ GADLVRI++
Sbjct: 8 VRRLSKKIMVGNVAVGGDAPISVQSMTNTLTTDVDATVAQIQRLEAVGADLVRISIPTMN 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PL+ADIHF +AL+VAE D +R+NPGN +
Sbjct: 68 AAEAFKEIK-----KRTSLPLIADIHFDYRIALKVAEYGVDCLRINPGNIGN-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + Y +RIG N GSL I YG+ + +VES
Sbjct: 115 --------------EQRIRSVVDCARHYNIPIRIGVNGGSLETDIQEKYGEPTAAALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I ++L+F F S+KAS+ ++ V++Y+LL E+ PLHLG+TEAG
Sbjct: 161 AMRHVDILQRLNFDEFKVSVKASDALLAVESYQLLAKEI-----QQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+G+G LL G+GDT+RVSL P +EI
Sbjct: 216 GSVKSAVGMGLLLAQGIGDTLRVSLAADPVEEI 248
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 542 ILHDLPFNEDKIGRVQAARRLFEY----LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL L F+E K+ V+A+ L L + P+ I G+ + +
Sbjct: 167 ILQRLNFDEFKVS-VKASDALLAVESYQLLAKEIQQPLHLGITEAGGLRSGS--VKSAVG 223
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL G+GD L + + ++ F++L+ R+R+ +++CP+C R FD+
Sbjct: 224 MGLLLAQGIGDTLRVSLAADPVEEIK-VGFDILKSLRIRSRGINFIACPTCSRQEFDVIA 282
Query: 658 ISAEIREKTSH--LPGVSIAIMGCIVNGPGEMADADFGYVGG 697
E+ ++ +P + ++I+GC+VNGPGE +D G GG
Sbjct: 283 TVNELEKRLEDVIMP-MDVSIIGCVVNGPGEALISDIGITGG 323
>gi|299537682|ref|ZP_07050971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZC1]
gi|424735437|ref|ZP_18163900.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZB2]
gi|298726661|gb|EFI67247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZC1]
gi|422950094|gb|EKU44463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZB2]
Length = 371
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQVVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V A +E S+ N+P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVNLAIEAYEKASKA-FNYPLHLGITESGT 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + AG +GA+L G+G+ L + + ++ + LL+ + + +S
Sbjct: 211 LFAGTVKSAAG--LGAILSKGIGNTLRISLSADPVEEVK-VARELLKSFGLASNMATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E S L + +A++GC VNGPGE +AD G + GA G+
Sbjct: 268 CPTCGRIEIDLISIANEVEEYISKLNVPLKVAVLGCAVNGPGEAREADIG-IAGARGEGL 326
Query: 704 LYV-GKTVVK 712
L++ GKTV K
Sbjct: 327 LFMKGKTVRK 336
>gi|420475466|ref|ZP_14974137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-21]
gi|393093573|gb|EJB94190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-21]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELEDEIKVARAI 248
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ D ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELEDEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|421712943|ref|ZP_16152274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R32b]
gi|407216309|gb|EKE86146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R32b]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ + +L+ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIK-VARAILRHSGCLKEGINWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|311744136|ref|ZP_07717942.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromicrobium
marinum DSM 15272]
gi|311313266|gb|EFQ83177.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromicrobium
marinum DSM 15272]
Length = 382
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG V +G + PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRPTRKIKVGTVDVGGDAPISVQSMTTTLTSDVNSTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA +I + IP++ADIHF P V + +RVNPGN QF
Sbjct: 78 ADALPDIA-----RKSQIPVIADIHFQPKYVYAAIDAGCAAVRVNPGNIR----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ + + K G ++RIG N GSL R+M YG +P +VESA
Sbjct: 125 --DDQ-----------VGAIAKAAKDAGVSIRIGVNAGSLDKRLMEKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV+MVQAY EM D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVIMVQAY-----EMLSERGDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGLEVPLR 309
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 543 LHDLPFN---EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
HD + D + VQA +E LSE ++P+ H+ I + T G
Sbjct: 183 FHDFKISVKHNDPVIMVQA----YEMLSERG-DWPL--HLGVTEAGPAFQGTIKSATAFG 235
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEIS 659
ALL G+GD + + + ++ +LQ +R K E VSCPSCGR D+ ++
Sbjct: 236 ALLSRGIGDTIRVSLSAPPVEEVK-VGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLA 294
Query: 660 AEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
++ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 295 EQV---TAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 347
>gi|398864934|ref|ZP_10620462.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM78]
gi|398244326|gb|EJN29883.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM78]
Length = 369
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|340627861|ref|YP_004746313.1| putative GCPE protein [Mycobacterium canettii CIPT 140010059]
gi|433627988|ref|YP_007261617.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140060008]
gi|433643059|ref|YP_007288818.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070008]
gi|340006051|emb|CCC45221.1| putative GCPE protein [Mycobacterium canettii CIPT 140010059]
gi|432155594|emb|CCK52845.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140060008]
gi|432159607|emb|CCK56916.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070008]
Length = 387
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 148/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSRGIGDTIRVSLSAPPVEEVK-VGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANEV---TAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|377559572|ref|ZP_09789119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
otitidis NBRC 100426]
gi|377523242|dbj|GAB34284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
otitidis NBRC 100426]
Length = 394
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G+LL G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 235 GTIKSSVAFGSLLSQGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + + EG EV R
Sbjct: 293 GRAQVDVYKLADAVTAGLEGMEVPLR 318
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
G+LL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GSLLSQGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ + T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLADAV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
>gi|304390859|ref|ZP_07372811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325742|gb|EFL92988.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 396
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR + VG+VA+G + P+ VQ+MTT T DVA T++++ + G D++R+ +
Sbjct: 32 RHKTRKIQVGSVAVGGDAPVSVQSMTTTLTSDVAATLQQIAELTAAGCDIIRVACPSADD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI K IP+VADIHF P + E +RVNPGN +
Sbjct: 92 AAALPEI-----CKRSTIPVVADIHFQPKYVFQAIEAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + +G A+RIG N GSL R+ +G + + ESA
Sbjct: 137 SFDDQVRE-----------IARAATDHGTALRIGVNAGSLDKRLYEKFGGATAEALAESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + +DFH+F S+K NPV M++AYRLL HG D+PLHLGVTEAG G
Sbjct: 186 MWEASLFEDVDFHDFAISVKHHNPVTMIRAYRLLAQ----HG-DWPLHLGVTEAGPTFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 241 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 272
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL +G+GD + + + ++ +L+ +R E VSCPSCGR+
Sbjct: 242 IKSATAFGALLSEGIGDTIRVSLSAPPVEEVK-VGLEILRSMGLRKRNFEIVSCPSCGRS 300
Query: 652 LFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ E++A +++ T L +A+MGCIVNGPGE +AD G G GK +++
Sbjct: 301 QVDVCTLANEVTAGLKDITYPL---RVAVMGCIVNGPGEAREADLGVASGN-GKGQIFIK 356
Query: 708 KTVVK 712
V+K
Sbjct: 357 GKVIK 361
>gi|298345302|ref|YP_003717989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii ATCC 43063]
gi|315656364|ref|ZP_07909253.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235363|gb|ADI66495.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii ATCC 43063]
gi|315492923|gb|EFU82525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 396
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR + VG+VA+G + P+ VQ+MTT T DVA T++++ + G D++R+ +
Sbjct: 32 RHKTRKIQVGSVAVGGDAPVSVQSMTTTLTSDVAATLQQIAELTAAGCDIIRVACPSADD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI K IP+VADIHF P + E +RVNPGN +
Sbjct: 92 AAALPEI-----CKRSTIPVVADIHFQPKYVFQAIEAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + +G A+RIG N GSL R+ +G + + ESA
Sbjct: 137 SFDDQVRE-----------IARAATDHGTALRIGVNAGSLDKRLYEKFGGATAEALAESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + +DFH+F S+K NPV M++AYRLL HG D+PLHLGVTEAG G
Sbjct: 186 MWEASLFEDVDFHDFAISVKHHNPVTMIRAYRLLAQ----HG-DWPLHLGVTEAGPTFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 241 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 272
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T GALL +G+GD + + + ++ +L+ +R E VSCPSCGR+
Sbjct: 242 IKSATAFGALLSEGIGDTIRVSLSAPPVEEVK-VGLEILRSMGLRKRNFEIVSCPSCGRS 300
Query: 652 LFDL----QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ E++A +++ T L +A+MGCIVNGPGE +AD G G GK +++
Sbjct: 301 QVDVCTLANEVTAGLKDITYPL---RVAVMGCIVNGPGEAREADLGVASGN-GKGQIFIK 356
Query: 708 KTVVK 712
V+K
Sbjct: 357 GKVIK 361
>gi|407476699|ref|YP_006790576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium antarcticum B7]
gi|407060778|gb|AFS69968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium antarcticum B7]
Length = 369
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 157/286 (54%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +R+
Sbjct: 7 RSKTRPVRVGDLVIGGSNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPEERD 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + NIPLV DIHF +AL E DKIR+NPGN R
Sbjct: 67 ALALAEIKSRI-----NIPLVVDIHFNYKLALMAIEAGVDKIRINPGNIGRR-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K +RIG N GSL I+ YG + RGMVESA
Sbjct: 114 --------------EKVEAVVTAAKAKNIPIRIGVNAGSLEKHILEKYGYPTARGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+KAS+ + ++AY+L +DYPLH+G+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSLKASDVQLALEAYQL-----ASESFDYPLHVGITESGPLRTG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+KSA G+G +L G+G+T+RVSL+ P +E+ + L + G+ A
Sbjct: 215 SLKSAAGLGAILSRGIGNTVRVSLSADPVEEVKVAKEVLKSFGLAA 260
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K VQ A ++ SE+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSL-KASDVQLALEAYQLASES-FDYPLHVGITESGP 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ L AG +GA+L G+G+ + + + ++ + +L+ + +S
Sbjct: 211 LRTGSLKSAAG--LGAILSRGIGNTVRVSLSADPVEEVK-VAKEVLKSFGLAANAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
CP+CGR DL I+AEI + + + +A++GC VNGPGE +AD G G
Sbjct: 268 CPTCGRIEIDLMAIAAEIEDYIDKIQVNIKVAVLGCAVNGPGEAREADIGIAGA 321
>gi|402313203|ref|ZP_10832124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium ICM7]
gi|400366963|gb|EJP19983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium ICM7]
Length = 352
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 176/326 (53%), Gaps = 37/326 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG + PI +Q+M T DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKYIGGDMPILIQSMCNTKTDDVKATVDQILRLEDAGCDIIRVAVPNSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL + DKIR+NPGN
Sbjct: 61 AASAISEIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGS-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + G+VES
Sbjct: 108 --------------SERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I + ++N + S+K+S+ ++ V+A+ E+ DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMYYNNLVISIKSSDVMMCVKAH-----ELISQRTDYPLHIGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ V
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKLILNNLGLRKGGIE--VVSCPTC 266
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D +G++ EG +++ +
Sbjct: 267 GRTNIDLIGLAGKVEKLVEGYDLNIK 292
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 537 IDATMILHDLPFNE----DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D I+ D+ +N K V + E +S+ ++P+ I + R +I
Sbjct: 155 LDKVKIIEDMYYNNLVISIKSSDVMMCVKAHELISQRT-DYPLHIGITESGTVKRG--MI 211
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTL 652
+ +G +L G+GD + + G + + +L +R E VSCP+CGRT
Sbjct: 212 KSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKL-ILNNLGLRKGGIEVVSCPTCGRTN 270
Query: 653 FDLQEISAEIREKT-SHLPGVSIAIMGCIVNGPGEMADAD 691
DL ++ ++ + + + +A+MGC+VNGPGE +AD
Sbjct: 271 IDLIGLAGKVEKLVEGYDLNIKVAVMGCVVNGPGEAKEAD 310
>gi|385225428|ref|YP_005785353.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 83]
gi|420404333|ref|ZP_14903516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6261]
gi|332673574|gb|AEE70391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 83]
gi|393018212|gb|EJB19363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6261]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ +SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|404422330|ref|ZP_11004022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403657514|gb|EJZ12286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 384
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V IGSEHPI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLNVGGVGIGSEHPIAVQSMCTTKTHDVNSTLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADALAEIA-----RHSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLQKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + + + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGYGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEV 259
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 236 GALLSEGIGDTIRVSLSAPPAEEVK-VGNQILESLNLRPRGLEIVSCPSCGRAQVDVYTL 294
Query: 659 SAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAM 717
+ + L + +A+MGC+VNGPGE +AD G G GK ++V V+K +
Sbjct: 295 ANAVSAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPE 352
Query: 718 EQATDALIQ 726
Q + LI+
Sbjct: 353 AQIVETLIE 361
>gi|217034641|ref|ZP_03440047.1| hypothetical protein HP9810_875g7 [Helicobacter pylori 98-10]
gi|384896076|ref|YP_005770065.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 35A]
gi|420395283|ref|ZP_14894510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY1124]
gi|420438652|ref|ZP_14937626.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-29]
gi|420485651|ref|ZP_14984269.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4]
gi|420489096|ref|ZP_14987693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11]
gi|420516146|ref|ZP_15014609.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4c]
gi|420517849|ref|ZP_15016303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4d]
gi|420522775|ref|ZP_15021199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11b]
gi|425789221|ref|YP_007017141.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Aklavik117]
gi|216942889|gb|EEC22378.1| hypothetical protein HP9810_875g7 [Helicobacter pylori 98-10]
gi|315586692|gb|ADU41073.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 35A]
gi|393013719|gb|EJB14893.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY1124]
gi|393056252|gb|EJB57164.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-29]
gi|393103786|gb|EJC04349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4]
gi|393107846|gb|EJC08386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11]
gi|393123348|gb|EJC23817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4d]
gi|393124445|gb|EJC24913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4c]
gi|393129732|gb|EJC30166.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11b]
gi|425627536|gb|AFX91004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Aklavik117]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|297202724|ref|ZP_06920121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sviceus ATCC 29083]
gi|197713303|gb|EDY57337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sviceus ATCC 29083]
Length = 385
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + +P++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQLPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAARDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEV 258
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ ++ E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPVEEVK-VGNQILESLNLKQRGLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLTGMDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|425735408|ref|ZP_18853722.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium casei S18]
gi|425479814|gb|EKU46986.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium casei S18]
Length = 382
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS++PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIHVGKVGVGSDYPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A ++ QK+ IP++ADIHF P V + +RVNPGN +
Sbjct: 79 AAAL----PAIAQKS-QIPVIADIHFQPKYVYAAIDAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K G ++RIG N GSL RIM +G +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAAKDAGTSIRIGVNAGSLDKRIMEKFGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PV+MV+AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHHDPVIMVRAY-----EMLAERGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 259
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ I + T GALL G+GD + + +
Sbjct: 201 RAYEMLAERG-DWPL--HLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVE 257
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AI 676
++ +L+ ++ K E VSCPSCGR D+ ++ ++ T+ L G+ + A+
Sbjct: 258 EVK-VGNQILESLNLKPRKLEIVSCPSCGRAQVDVYTLAEKV---TAGLEGMEVPLRVAV 313
Query: 677 MGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK---RGIAMEQATDALIQLIKDHGR 733
MGC+VNGPGE +AD G G GK ++V V+K + +E + +++ +D
Sbjct: 314 MGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIKTVPESLIVETLIEEAMRIAEDSDV 372
Query: 734 WAEPP 738
+ PP
Sbjct: 373 PSGPP 377
>gi|420492651|ref|ZP_14991225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15]
gi|420526672|ref|ZP_15025073.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15b]
gi|393107090|gb|EJC07633.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15]
gi|393131977|gb|EJC32400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15b]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|312793077|ref|YP_004026000.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180217|gb|ADQ40387.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 348
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 164/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ + +GN IG PIR+Q+MT TKD+ TVE+++R+ G D++R+ V A A
Sbjct: 5 TKKIKIGNFYIGGGEPIRIQSMTNTKTKDIEATVEQILRLESLGCDIIRVAVPDLDSAKA 64
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN D R E
Sbjct: 65 ISKIKSRI-----HIPLVADIHFDHKLALEAIYNGADKIRINPGNIGDERKVQE------ 113
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
+ ++ K+YG A+R+G N GSL D + Y P +VE+A
Sbjct: 114 ----------------IAKEAKRYGIAIRVGANSGSLPKDILQKYKSPVPDAIVEAAIYQ 157
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ + +F N + S+K+S+ + +++Y +L ++ YPLH+G+TEAG G +K
Sbjct: 158 VRLLERFEFDNIVVSVKSSDVLTTIKSYEILSQKL-----SYPLHVGLTEAGTFVAGTVK 212
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ +L++GV
Sbjct: 213 SSIAIGYLLLRGIGDTIRVSLTDSPEKEVIVAKEI----LKSLKLRKGV 257
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 563 FEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL---LLEAPGQDF 619
+E LS+ L++P+ H+ + + +G LL+ G+GD + L ++P ++
Sbjct: 185 YEILSQK-LSYPL--HVGLTEAGTFVAGTVKSSIAIGYLLLRGIGDTIRVSLTDSPEKEV 241
Query: 620 DFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMG 678
++ +L+ ++R + VSCP+C R DL I+ E+ + +L +++AIMG
Sbjct: 242 IVAKE----ILKSLKLRKG-VKIVSCPTCARCNVDLLRIANEVENRIQNLDLDITVAIMG 296
Query: 679 CIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 728
C VNGPGE +AD G G + GK + R + + D L++ I
Sbjct: 297 CAVNGPGEAKEADVGVACGIGEGLLFKKGKII--RKVKENEIVDELVKEI 344
>gi|167766538|ref|ZP_02438591.1| hypothetical protein CLOSS21_01044 [Clostridium sp. SS2/1]
gi|167711661|gb|EDS22240.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. SS2/1]
gi|291558577|emb|CBL37377.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[butyrate-producing bacterium SSC/2]
Length = 353
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 165/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR + +G+V IG +P+ +Q+MT T++V TV++++ + G ++R TV +
Sbjct: 4 RNQTRVISIGDVKIGGGNPVAIQSMTNTKTENVEETVKQILALEKAGCQIIRCTVPTMKA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 AEAFTEIK-----KQIHIPLVADIHFDYKLAIAAMEHGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVESA 262
EE +VE KKY +R+G N GSL ++ Y G + +G+VESA
Sbjct: 110 -------------EENIRKVVETAKKYHVPIRVGVNSGSLEKPLVKKYNGVTAQGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + K DFH+ + S+K+S+ ++ +AYRL+ ++ +YPLH+G+TEAG G
Sbjct: 157 LDKVAMLEKYDFHDMVVSIKSSDVLMCAEAYRLVADKI-----NYPLHVGITEAGTVFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+G+G +L G+GDTIRVSLT P EI + L LG+R+ ++
Sbjct: 212 NIKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASAKLILKTLGLRSGGIE 261
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
L + +N+P+ I + + I + +G +L G+GD + + G + +
Sbjct: 189 LVADKINYPLHVGITEAGTVFSGN--IKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASA 246
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS--IAIMGCIVNG 683
+L+ +R+ E VSCP+CGRT DL ++ ++ + ++ +A+MGC+VNG
Sbjct: 247 KL-ILKTLGLRSGGIEVVSCPTCGRTNIDLIPLANQVETMAADFENLNLKVAVMGCVVNG 305
Query: 684 PGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDAL 724
PGE +AD G GG G+ L + K V R + +Q D L
Sbjct: 306 PGEAKEADVGIAGG-NGE-GLLIKKGEVIRKVPEDQLLDTL 344
>gi|172056891|ref|YP_001813351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium sibiricum 255-15]
gi|229485803|sp|B1YLA2.1|ISPG_EXIS2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171989412|gb|ACB60334.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Exiguobacterium sibiricum 255-15]
Length = 369
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 157/286 (54%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +R+
Sbjct: 7 RSKTRPVRVGDLVIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPEERD 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + NIPLV DIHF +AL E DKIR+NPGN R
Sbjct: 67 ALALAEIKSRI-----NIPLVVDIHFNYKLALMAIEAGVDKIRINPGNIGRR-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K +RIG N GSL I+ YG + RGMVESA
Sbjct: 114 --------------EKVEAVVTAAKAKNIPIRIGVNAGSLEKHILEKYGYPTARGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+KAS+ + ++AY+L +DYPLH+G+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSLKASDVQLALEAYQL-----ASESFDYPLHVGITESGPLRTG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+KSA G+G +L G+G+T+RVSL+ P +E+ + L + G+ A
Sbjct: 215 SLKSAAGLGAILSRGIGNTVRVSLSADPVEEVKVAKEVLKSFGLAA 260
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K VQ A ++ SE+ ++P+ I
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSL-KASDVQLALEAYQLASES-FDYPLHVGITESGP 210
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ L AG +GA+L G+G+ + + + ++ + +L+ + +S
Sbjct: 211 LRTGSLKSAAG--LGAILSRGIGNTVRVSLSADPVEEVK-VAKEVLKSFGLAANAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
CP+CGR DL I+AEI + + + +A++GC VNGPGE +AD G G
Sbjct: 268 CPTCGRIEIDLMAIAAEIEDYIDKIQVNIKVAVLGCAVNGPGEAREADIGIAGA 321
>gi|147677597|ref|YP_001211812.1| hypothetical protein PTH_1262 [Pelotomaculum thermopropionicum SI]
gi|146273694|dbj|BAF59443.1| predicted enzyme [Pelotomaculum thermopropionicum SI]
Length = 349
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 151/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V +G P+ VQ+MT DT+D A T++++ +A +G ++VR+ V
Sbjct: 3 RRKTRPVFVGKVQVGGGAPVSVQSMTNTDTRDAAATIKQINELAAEGCEIVRVAVPDWEA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A ++ KN +IPLVADIHF +AL + D +R+NPGN R
Sbjct: 63 AGAL-----PVIVKNISIPLVADIHFDYRLALEAIKAGVDGLRINPGNIGGRNRVEAVAA 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ G +RIG N GSL R++ YG +P MVESA
Sbjct: 118 AA----------------------RERGIPIRIGVNAGSLEKRLLEKYGGVTPLAMVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I L+F N S+KASN +M++AYRLL ++ DYPLH+GVTEAG G
Sbjct: 156 LNHIKILEDLNFDNIKVSLKASNLRLMIEAYRLLSEKV-----DYPLHVGVTEAGTLCYG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL +G+GDTIRVSLT P E+
Sbjct: 211 TVKSALGIGILLNEGIGDTIRVSLTGHPRHEV 242
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 542 ILHDLPFNEDKIGRVQAARRL----FEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F+ K+ + RL + LSE +++P+ H+ + +
Sbjct: 161 ILEDLNFDNIKVSLKASNLRLMIEAYRLLSEK-VDYPL--HVGVTEAGTLCYGTVKSALG 217
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G LL +G+GD + + G +R +++L+ +R E +SCP+CGRT DL
Sbjct: 218 IGILLNEGIGDTIRVSLTGHPRHEVR-VGYDILKALGLRRRGVEVISCPTCGRTQIDLIR 276
Query: 658 ISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
I+ E+ E+ L + +A+MGC VNGPGE +AD G GG + G+ + R +
Sbjct: 277 IAEEVEERLRRLDKPLKVAVMGCAVNGPGEAREADVGIAGGKGEGLLFRKGRVI--RKVP 334
Query: 717 MEQATDALIQLIK 729
++ D LI+ I+
Sbjct: 335 QDRLVDELIKEIQ 347
>gi|433631964|ref|YP_007265592.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070010]
gi|432163557|emb|CCK60975.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070010]
Length = 387
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 148/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSRGIGDTIRVSLSAPPVEEVK-VGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANEV---TAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|329888693|ref|ZP_08267291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta ATCC 11568]
gi|328847249|gb|EGF96811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta ATCC 11568]
Length = 383
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+V +G + PI VQ+MT T D A T+E++ ++ + GAD+VR++ + E
Sbjct: 18 RRKSRQIMVGSVPVGGDAPISVQSMTNTPTTDAAATLEQIRQLEEAGADIVRVSCPDE-E 76
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGNFADRRAQFEQLE 203
+ A F + + +PLVADIHF + A+ +R+NPGN
Sbjct: 77 STAAFRT----IAREARVPLVADIHFHYKRGIEAAQAGAACLRINPGNIGS--------- 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++EV V+ + +G ++RIG N GSL ++ YG+ P MVESA
Sbjct: 124 ---------IERVKEV----VQAARDHGCSMRIGVNAGSLEKELLEKYGEPCPDAMVESA 170
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI + LDFH F S+KAS+P + V AY+ L + D PLHLGVTEAG G
Sbjct: 171 LNHARILQDLDFHEFKISVKASDPFLTVAAYQQLADAI-----DCPLHLGVTEAGPLRTG 225
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G +L G+GDTIRVSL P +EI
Sbjct: 226 TIKSAIGMGNMLWSGIGDTIRVSLAADPVEEI 257
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 16/193 (8%)
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F+E KI V+A+ + L + P+ H+ I +
Sbjct: 176 ILQDLDFHEFKIS-VKASDPFLTVAAYQQLADAIDCPL--HLGVTEAGPLRTGTIKSAIG 232
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G +L G+GD + + + ++ F++L+ +R+ ++CPSC R F++ E
Sbjct: 233 MGNMLWSGIGDTIRVSLAADPVEEIK-VGFDILKSLGLRHRGVNIIACPSCARQGFNVIE 291
Query: 658 ISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKTVVKRGI 715
+ E+ +H+ +S++I+GC+VNGPGE D G+ GG G +Y+ GK I
Sbjct: 292 TVGILEERLAHVSTAMSLSIIGCVVNGPGEALYTDIGFTGGGKGAGMVYLNGK------I 345
Query: 716 AMEQATDALIQLI 728
A +QA + +I I
Sbjct: 346 AHKQANEGMIDEI 358
>gi|254382088|ref|ZP_04997450.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. Mg1]
gi|194340995|gb|EDX21961.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. Mg1]
Length = 385
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+VA+G + PI VQ+MTT T DV T++++ + G ++VR+ + +
Sbjct: 18 RRVSRKIQVGSVAVGGDAPISVQSMTTTRTSDVGATLQQIAELTASGCNIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVKE-----------IARAAKDAGTPIRIGVNAGSLDARLLKKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFSDIKISVKHNDPVVMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L ++ L+ P
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLNLKPRRLEIVSCP--SC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 284 GRAQVDVYKLAEEVTAGLEGMEVPLR 309
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +L+ ++ + E VSCPSCGR
Sbjct: 228 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGIQILESLNLKPRRLEIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 287 QVDVYKLAEEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 342
Query: 708 KTVVK 712
V+K
Sbjct: 343 GEVIK 347
>gi|425745623|ref|ZP_18863666.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
baumannii WC-323]
gi|425488061|gb|EKU54401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
baumannii WC-323]
Length = 371
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI VQ+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVDATVAQIQRCADAGADIMRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K +PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AEAFGAIR-----KRVTVPLVADIHFDHRIALAVADYGADCLRINPGNIGSD-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
Q + EV V K +G ++RIG N GSL + + YG+ + + ++ESA
Sbjct: 115 ----------QKVREV----VAAAKHHGISIRIGVNAGSLEKDLQAKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL ++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSQQI-----DNPLHLGVTEAGIYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRA 367
+KSAI +G LL +G+GDT+R+SL PE EI L +LG+R+
Sbjct: 216 TVKSAIALGGLLMEGIGDTMRISLAAEPEDEIKIGFDILKSLGLRS 261
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 542 ILHDLPFNEDKIGRVQA--------ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
IL L F+E K+ V+A A RL +N L+ V GI+R V
Sbjct: 166 ILDRLDFHEFKVS-VKASNVFLTMDAYRLLSQQIDNPLHLGVTEA-----GIYRTGTVKS 219
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A +G LL++G+GD + + + D ++ F++L+ +R+ +++CPSC R F
Sbjct: 220 A-IALGGLLMEGIGDTMRISLAAEPEDEIK-IGFDILKSLGLRSNGINFIACPSCSRQEF 277
Query: 654 DLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
++ ++ + E+ + + ++++GC VNGPGE +AD G VG +P
Sbjct: 278 NVIQVMQALEERLEDIRTPMDLSVIGCKVNGPGEAKEADIGIVGASP 324
>gi|420455422|ref|ZP_14954251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-14]
gi|393072394|gb|EJB73172.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-14]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKSIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGRLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGRLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420425308|ref|ZP_14924369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-5]
gi|393041726|gb|EJB42740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-5]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D +R+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAVRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|390455658|ref|ZP_10241186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
peoriae KCTC 3763]
Length = 372
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 3 LRQDTRPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 63 AAAAIKEIK-----KRIHIPLVADIHFNYKLALLAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVNACKEKGIPIRIGVNAGSLEQHLLDKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY + AE+ YPLHLG+TEAG
Sbjct: 156 ALYHIGILEELDFHDIIVSLKASDVPMAIAAY-MKAAEI----IKYPLHLGITEAGTLFT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 211 GTVKSAAGMGALLASGIGSTMRISLSADPVEEVKVAREL 249
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL G+G + + + ++ + LL+ + +SCP+CGR
Sbjct: 213 VKSAAGMGALLASGIGSTMRISLSADPVEEVK-VARELLKTFGLITNAATLISCPTCGRL 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ + + L + ++++GC VNGPGE +AD G G
Sbjct: 272 DIDLFSIANEVEDYIAKLKVPIKVSVLGCAVNGPGEAKEADIGIAGA 318
>gi|385226859|ref|YP_005786783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SNT49]
gi|344331772|gb|AEN16802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SNT49]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L +++ ++ ++ SH+ + I++MGC+VN GE AD G + + G+ +
Sbjct: 271 EANLVDMANKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGRVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420461993|ref|ZP_14960779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-3]
gi|420466930|ref|ZP_14965687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-9]
gi|393079728|gb|EJB80459.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-3]
gi|393085328|gb|EJB86016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-9]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|420412199|ref|ZP_14911328.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4228]
gi|393027857|gb|EJB28945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4228]
Length = 359
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTLEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|398858740|ref|ZP_10614427.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM79]
gi|398238467|gb|EJN24194.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM79]
Length = 369
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|308070423|ref|YP_003872028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
polymyxa E681]
gi|305859702|gb|ADM71490.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Paenibacillus polymyxa E681]
Length = 372
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 3 LRQDTRPVKVGNLTIGGSNEVLIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 63 AAAAIKEIK-----KRIHIPLVADIHFNHKLALLAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVKACKEKGIPIRIGVNAGSLEQHLLDKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALYHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEI----IKYPLHLGITEAGTLFT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 211 GTVKSAAGMGALLASGIGSTMRISLSADPVEEVKVAREL 249
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL G+G + + + ++ + LL+ + +SCP+CGR
Sbjct: 213 VKSAAGMGALLASGIGSTMRISLSADPVEEVK-VARELLKTFGLITNAATLISCPTCGRL 271
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ + + L + ++++GC VNGPGE +AD G G
Sbjct: 272 DIDLFSIANEVEDYIAKLKVPIKVSVLGCAVNGPGEAKEADIGIAGA 318
>gi|253575673|ref|ZP_04853009.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. oral taxon 786 str. D14]
gi|251845011|gb|EES73023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. oral taxon 786 str. D14]
Length = 373
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 4 LRQDTRPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 64 AAAAIKEIK-----KRIHIPLVADIHFNYKLALLAIENGIDKVRINPGNIG-RREKVEA- 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 117 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 157 ALYHIGILEDLDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA GIG LL G+G T+R+SL+ P +E+ R L
Sbjct: 212 GTVKSAAGIGALLSMGIGSTVRISLSADPVEEVKVAREL 250
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +GALL G+G + + + ++ + LL+ + VSCP+CGR
Sbjct: 214 VKSAAGIGALLSMGIGSTVRISLSADPVEEVK-VARELLKTFGLITNAATLVSCPTCGRL 272
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL I+ E+ ++L + ++++GC VNGPGE +AD G G
Sbjct: 273 DIDLFSIANEVEAYIANLKVPIKVSVLGCAVNGPGEAREADIGIAGA 319
>gi|398841608|ref|ZP_10598819.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM102]
gi|398879594|ref|ZP_10634686.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM67]
gi|398882213|ref|ZP_10637183.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM60]
gi|398907351|ref|ZP_10653800.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM50]
gi|398107921|gb|EJL97911.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM102]
gi|398171717|gb|EJM59614.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM50]
gi|398196302|gb|EJM83315.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM67]
gi|398199462|gb|EJM86404.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM60]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|255326390|ref|ZP_05367474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|422325359|ref|ZP_16406395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa M508]
gi|255296607|gb|EET75940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|353343363|gb|EHB87681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa M508]
Length = 386
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 161/289 (55%), Gaps = 34/289 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQFKVGSVGVGSESPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 78 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIQAGCGAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQMASDHGVSLRIGVNAGSLDKRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAEL 370
+KS++ GTLL G+GDTIRVSL+ PP +E+ + L +L +R +L
Sbjct: 227 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVKVGTKILESLNLRPRKL 275
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + G LL G+GD + + + ++ +L+ +R K + VSCPSCGR
Sbjct: 228 IKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVK-VGTKILESLNLRPRKLDIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
++ E++ + + H+ + +A+MGC+VNGPGE +AD G G GK ++V V
Sbjct: 287 QVNVWELAENVTKGLEHMKVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEV 345
Query: 711 VKRGIAMEQATDALIQ 726
+K + +Q + LI+
Sbjct: 346 IKT-VPEDQIVETLIE 360
>gi|283458512|ref|YP_003363140.1| isoprenoid biosynthesis protein [Rothia mucilaginosa DY-18]
gi|283134555|dbj|BAI65320.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Rothia mucilaginosa DY-18]
Length = 400
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 161/289 (55%), Gaps = 34/289 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 32 RRKTRQFKVGSVGVGSESPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 92 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIQAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 137 KFDDQVKE-----------IAQMASDHGVSLRIGVNAGSLDKRLLEKYGKATPEALVESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L D+PLHLGVTEAG G
Sbjct: 186 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAERG-----DWPLHLGVTEAGPAFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAEL 370
+KS++ GTLL G+GDTIRVSL+ PP +E+ + L +L +R +L
Sbjct: 241 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVKVGTKILESLNLRPRKL 289
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + G LL G+GD + + + ++ +L+ +R K + VSCPSCGR
Sbjct: 242 IKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVK-VGTKILESLNLRPRKLDIVSCPSCGRA 300
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
++ E++ + + H+ + +A+MGC+VNGPGE +AD G G GK ++V V
Sbjct: 301 QVNVWELAENVTKGLEHMKVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEV 359
Query: 711 VKRGIAMEQATDALIQ 726
+K + +Q + LI+
Sbjct: 360 IKT-VPEDQIVETLIE 374
>gi|377564290|ref|ZP_09793612.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
sputi NBRC 100414]
gi|377528472|dbj|GAB38777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
sputi NBRC 100414]
Length = 394
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G+LL G+GDTIRVSL+ PP +EI
Sbjct: 235 GTIKSAVAFGSLLSQGIGDTIRVSLSAPPAEEI 267
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 599 GALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQ 656
G+LL G+GD + L AP + + D +LQ +R K E VSCPSCGR D+
Sbjct: 244 GSLLSQGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCGRAQVDVY 300
Query: 657 EISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 712
+++ + T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 301 KLAEAV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK 356
>gi|154148016|ref|YP_001406557.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Campylobacter
hominis ATCC BAA-381]
gi|153804025|gb|ABS51032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Campylobacter
hominis ATCC BAA-381]
Length = 351
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 153/277 (55%), Gaps = 32/277 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R KT+ + GNVAIG + PI VQ+MT + TKD+ T+E++ R+ G D+VR V +
Sbjct: 1 MRYKTKKIFAGNVAIGGDAPISVQSMTFSKTKDIKATLEQINRLYFAGCDIVRCAVLDNK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
+A+A EIK K +P+VADIHF AL+ A+ D IR+NPGN
Sbjct: 61 DAEALEEIK-----KESPLPIVADIHFNYRHALKTAKFVDAIRLNPGNIGG--------- 106
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
E +V CK+ +RIG N GSL ++ YG +P+GMVESA
Sbjct: 107 -------------SERIKAVVGACKERNLPIRIGVNSGSLEEKFEKKYGRTPKGMVESAL 153
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K +F + + S+K+S+ + ++AY+ L + +YP HLGVTEAG
Sbjct: 154 YNIDLLEKENFTDIVVSLKSSDTIKTIKAYKALRKK-----CEYPFHLGVTEAGTEFHAT 208
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAI +G LL G+GDTIRVS+T EKEI R +
Sbjct: 209 IKSAIALGNLLIAGIGDTIRVSITGELEKEIKVARAI 245
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL+ G+GD + + G+ ++ + +LQ ++ + +SCP+CGR
Sbjct: 209 IKSAIALGNLLIAGIGDTIRVSITGELEKEIK-VARAILQDSGIQQSGVNIISCPTCGRL 267
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
DL +I + +++++MGC+VN GE AD G + + GK V
Sbjct: 268 QCDLVTAVKKIETSLKDIKAPLNVSVMGCVVNAIGEAKGADVAIAFGKGNGLIIKKGKIV 327
Query: 711 VK 712
K
Sbjct: 328 AK 329
>gi|118602409|ref|YP_903624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
gi|166217127|sp|A1AW46.1|ISPG_RUTMC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|118567348|gb|ABL02153.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 358
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 175/322 (54%), Gaps = 43/322 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK++ V VG+VAIG + PI VQ+MT +T DV TV ++ I + GADLVR++V
Sbjct: 9 RRKSKQVFVGDVAIGGDAPISVQSMTNTETTDVKATVAQIQAIQNAGADLVRVSVPTIDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A F+I ++K NIPL++DIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEA-FKI----IKKQVNIPLISDIHFDYKIALKVAEYGADCLRINPGNIGRE-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
I EV + ++ + +RIG N GSL + Y + +P MVESA
Sbjct: 116 ----------DRIREVVAAAID----HNIPIRIGVNAGSLEKDLQKKYTEPTPEAMVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F I KL+F NF S+KAS + V AY+ L +++ D PLHLG+TEAG G
Sbjct: 162 FRQIDILDKLNFDNFKISLKASEIFMTVFAYQQLASQI-----DNPLHLGITEAGSLRFG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR----LANLGMRAAELQQGVAPFE 378
+KS+IG+G LL +G+GDTIR+SL P +D R L +L +R+ + P
Sbjct: 217 TIKSSIGLGLLLSEGIGDTIRISLASDP---VDEVRVGFDILKSLNLRSKGVNLIACP-- 271
Query: 379 EKHRHYFDFQRRSGQLPIQKEG 400
R FD + +L + EG
Sbjct: 272 SCSRQKFDVIKIVNELESRLEG 293
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL +G+GD + + D +R F++L+ +R+ ++CPSC R
Sbjct: 218 IKSSIGLGLLLSEGIGDTIRISLASDPVDEVR-VGFDILKSLNLRSKGVNLIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKT 709
FD+ +I E+ + + + +A++GC+VNGPGE G +GG P LY+ GKT
Sbjct: 277 KFDVIKIVNELESRLEGITAPIDVAVIGCVVNGPGEAKAVSVGLIGGEPNL--LYLDGKT 334
>gi|163815214|ref|ZP_02206591.1| hypothetical protein COPEUT_01374 [Coprococcus eutactus ATCC 27759]
gi|158449409|gb|EDP26404.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprococcus
eutactus ATCC 27759]
Length = 352
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 163/293 (55%), Gaps = 35/293 (11%)
Query: 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREAD 146
KTR + +G+ IG +PI +Q+MT T DV TV +++R+ G D++R T+ + AD
Sbjct: 2 KTREIHIGDRVIGGGNPILIQSMTNTKTSDVEATVAQILRLEKAGCDIIRCTINDEAAAD 61
Query: 147 ACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYT 205
A EIK K +IPLV DIHF +A++ E DKIR+NPGN ++
Sbjct: 62 AVPEIK-----KRIHIPLVGDIHFDYRLAIKAIENGVDKIRINPGNIGGQQK-------- 108
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFE 264
+ +VE KK +R+G N GSL D + Y G + G+VESA +
Sbjct: 109 --------------LAKVVEAAKKRNIPIRVGVNSGSLEKDLVEKYGGVTAEGIVESALD 154
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
R+ LD+HN + S+K+S+ ++ V+A+ L+ + DYPLH+G+TE+G G +
Sbjct: 155 KVRMIEDLDYHNIVISIKSSDVMMCVKAHELIADKT-----DYPLHVGITESGTVTRGNI 209
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
KS++G+G +L +G+GDTIRVSLT P EI + L LG+R ++ P
Sbjct: 210 KSSVGLGIILHEGIGDTIRVSLTGDPVDEILSAKLILKALGLRKGGVELVSCP 262
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L +G+GD + + G D + +L+ +R E VSCP+CGRT
Sbjct: 209 IKSSVGLGIILHEGIGDTIRVSLTGDPVDEILSAKL-ILKALGLRKGGVELVSCPTCGRT 267
Query: 652 LFDLQEISAEIREKTSHLPGVSI--AIMGCIVNGPGEMADADFGYVGG 697
DL ++ ++ + S ++I A+MGCIVNGPGE +AD G GG
Sbjct: 268 EIDLIGLANKVEKLVSDYDNLNIKVAVMGCIVNGPGEAKEADLGIAGG 315
>gi|409358280|ref|ZP_11236643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dietzia
alimentaria 72]
Length = 394
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 161/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 24 RRKTRQLFVGQVGVGSDHPISVQSMTTTKTHDINSTLQQIAELTASGCDIVRVACPRQED 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 84 ADAL-----ATIARKSPIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 127
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+++ YG +P +VES
Sbjct: 128 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLAKYGKATPEALVES 176
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 177 AVWEASLFEEYGFGDIKISVKHNDPVIMVEAYRQLAAKT-----DYPLHLGVTEAGPAFQ 231
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+
Sbjct: 232 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGTQILQSLNLRPRKLE 282
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 234 IKSAVAFGALLSEGIGDTIRVSLSAPPVEEIK-VGTQILQSLNLRPRKLEIVSCPSCGRA 292
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ +++ E+ T+ L G+S+ A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 293 QVDVYKLADEV---TAGLEGMSVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 348
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 349 GEVIKT-VPEAQIVETLIE 366
>gi|373106061|ref|ZP_09520366.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Stomatobaculum longum]
gi|371653308|gb|EHO18708.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Stomatobaculum longum]
Length = 356
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 161/285 (56%), Gaps = 35/285 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V +G+VAIG +HPIR+Q+M T+DV TV ++ + G ++VR+ V
Sbjct: 4 RHKTRVVRIGDVAIGGDHPIRIQSMCNTKTEDVEATVAQIRALTAAGCEIVRVAVPTMAA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ + IPLVADIHF +AL E DKIR+NPGN +
Sbjct: 64 AEALAEIR-----RQIKIPLVADIHFDYRLALAATEHGADKIRINPGNIGE--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESA 262
D +E+ V K+ +R+G N GSL D + Y G + G+VESA
Sbjct: 110 ---DWKLREV----------VNAAKERNIPIRVGVNSGSLEKDLLQKYGGVTAEGIVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E R +L + N + S+K+S+ ++ ++A+ LL E DYPLH+G+TEAG G
Sbjct: 157 LEKVRRIEELGYENLVISIKSSDVLMCIRAHELLAVET-----DYPLHIGITEAGTLLRG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+G+G +L +G+GDTIRVSLT P +EI R L +LG+R
Sbjct: 212 TVKSAVGLGVILYEGIGDTIRVSLTGDPLEEIKAAREILKSLGLR 256
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G +L +G+GD + + G + ++ + +L+ +R E VSCP+CGRT
Sbjct: 213 VKSAVGLGVILYEGIGDTIRVSLTGDPLEEIK-AAREILKSLGLRKGGVEVVSCPTCGRT 271
Query: 652 LFDLQEISAEIR---EKTSHLPGVSIAIMGCIVNGPGEMADADF 692
DL ++ + E+ S L V +A+MGC+VNGPGE +ADF
Sbjct: 272 EIDLIGLANRVESLVERYSDLD-VRVAVMGCVVNGPGEAREADF 314
>gi|398990009|ref|ZP_10693220.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM24]
gi|399015185|ref|ZP_10717461.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM16]
gi|424924741|ref|ZP_18348102.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens R124]
gi|398109196|gb|EJL99135.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM16]
gi|398145661|gb|EJM34439.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM24]
gi|404305901|gb|EJZ59863.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens R124]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|229491411|ref|ZP_04385235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis SK121]
gi|226185158|dbj|BAH33262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229321696|gb|EEN87493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis SK121]
Length = 391
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 26 RRKTRQLQVGTVGVGSDFPISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S++ K IP++ADIHF P A C +RVNPGN
Sbjct: 86 ADAL-----SIIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 129
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 130 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMEKYGKATPEALVES 178
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 179 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAK-----CDYPLHLGVTEAGPAFQ 233
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 234 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGNQILQSLNLRPRKLEIVSCP--SC 291
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG E+ R
Sbjct: 292 GRAQVDVYTLADEVSAGLEGMEIPLR 317
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR D+ +
Sbjct: 243 GALLAEGIGDTIRVSLSAPPAEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRAQVDVYTL 301
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ ++ L G+ I A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 302 ADEV---SAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGKVIKT- 356
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 357 VPEAQIVETLIE 368
>gi|297584615|ref|YP_003700395.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
selenitireducens MLS10]
gi|297143072|gb|ADH99829.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
selenitireducens MLS10]
Length = 366
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG + IG + +Q+MT + T DV V E++R+ + G +VR+
Sbjct: 5 THRKHTRPVKVGPLQIGGNDEVVIQSMTMSKTHDVDAVVAEILRLEEAGCQIVRVACPEM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
++A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 65 KDAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGIDKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I +LDFH+ + SMKAS+ + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEELDFHDIIVSMKASDVHLAVEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ G+G LL G+G+T+R+SL+ P +E+ + L
Sbjct: 213 TGTIKSSAGLGILLNQGIGNTVRISLSADPVEEVKVAKEL 252
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + +SCP+CGR
Sbjct: 216 IKSSAGLGILLNQGIGNTVRISLSADPVEEVK-VAKELLKAFGLAANAATLISCPTCGRI 274
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
DL I+ E+ E +T + P + ++++GC VNGPGE +AD G G + GKT
Sbjct: 275 EIDLISIANEVEEYIQTVNAP-IKVSVLGCAVNGPGEAKEADIGIAGARGEGLLFRKGKT 333
Query: 710 VVK 712
+ K
Sbjct: 334 IRK 336
>gi|420427258|ref|ZP_14926303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-9]
gi|420501414|ref|ZP_14999958.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-30]
gi|421719703|ref|ZP_16158987.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R046Wa]
gi|393042191|gb|EJB43202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-9]
gi|393150220|gb|EJC50528.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-30]
gi|407221026|gb|EKE90831.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R046Wa]
Length = 359
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|398853511|ref|ZP_10610110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM80]
gi|398239346|gb|EJN25057.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM80]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|386752617|ref|YP_006225836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Shi169]
gi|384558875|gb|AFH99342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Shi169]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ +SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|352106570|ref|ZP_08961513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
HAL1]
gi|350597613|gb|EHA13741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
HAL1]
Length = 371
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 151/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DVA TV ++ ++ GAD+VR++V
Sbjct: 9 RRHSRQIQVGNVAVGGDAPIAVQSMTNTNTLDVAATVAQIQQLEKAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ +IK K N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AETFGQIK-----KLVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVSAARDNGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF F S+KAS+ + V AYR L + + PLHLG+TEAG G
Sbjct: 162 MRHIDYLDRLDFQEFKVSVKASDVFMAVAAYRDLAVRI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 248
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD + + + ++ F++L+ ++R+ +++CPSC R
Sbjct: 218 VKSSIGLGMLLMDGIGDTIRVSLAADPVEEIK-VGFDMLRSLKLRSKGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSH-LPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
FD+ ++ E+ + ++++++GC+VNGPGE + D G GG+P + GK
Sbjct: 277 NFDVISTMNQLEERLEDVMTPLNVSVIGCVVNGPGEAKETDIGLTGGSPANLVYIDGKPA 336
Query: 711 VKRGIAMEQATDALIQLIKDHGR 733
K + + D L QLI++ R
Sbjct: 337 SK--LRNDHLVDDLEQLIREKVR 357
>gi|453072274|ref|ZP_21975400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
gi|452757737|gb|EME16138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
Length = 385
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLQVGTVGVGSDFPISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S++ K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----SIIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAK-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGNQILQSLNLRPRKLEIVSCP--SC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG E+ R
Sbjct: 286 GRAQVDVYTLADEVSAGLEGMEIPLR 311
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 230 IKSAVAFGALLAEGIGDTIRVSLSAPPAEEIK-VGNQILQSLNLRPRKLEIVSCPSCGRA 288
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ E+ ++ L G+ I A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 289 QVDVYTLADEV---SAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVK 344
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 345 GKVIKT-VPEAQIVETLIE 362
>gi|385228356|ref|YP_005788289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Puno120]
gi|344334794|gb|AEN15238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Puno120]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|304407483|ref|ZP_07389135.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus curdlanolyticus YK9]
gi|304343434|gb|EFM09276.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus curdlanolyticus YK9]
Length = 370
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 153/279 (54%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ T V VG + IG + +Q+M T T DV TV E++R+ + G +VR+TV K
Sbjct: 3 LRKDTVPVKVGPLTIGGSDEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNKE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
ADA EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E +
Sbjct: 63 AADAIKEIK-----KRIHIPLVADIHFDYRLALAAIENGVDKVRINPGNIG-RREKVEAV 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 117 ---------------------VKACKEKGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY M YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAY-----SMAAEKIKYPLHLGITEAGTLHT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ GIG LL G+G+T+R+SL+ P +E+ R L
Sbjct: 211 GTIKSSAGIGALLAMGIGNTVRISLSADPVEEVKVAREL 249
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
++ + +P+ I +H + AG +GALL G+G+ + + + ++
Sbjct: 189 MAAEKIKYPLHLGITEAGTLHTGTIKSSAG--IGALLAMGIGNTVRISLSADPVEEVK-V 245
Query: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGP 684
+ LL+ + VSCP+CGR DL I+ E+ + S + + ++++GC VNGP
Sbjct: 246 ARELLKTFGLITNAATLVSCPTCGRLDIDLFSIANEVEDYISKIKVPIKVSVLGCAVNGP 305
Query: 685 GEMADADFGYVGG 697
GE +AD G G
Sbjct: 306 GEAREADIGIAGA 318
>gi|408681068|ref|YP_006880895.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces venezuelae ATCC 10712]
gi|328885397|emb|CCA58636.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces venezuelae ATCC 10712]
Length = 385
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 154/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD+ ++ + + +P +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVKEIAKAASDARTP-----------IRIGVNAGSLDARLLKKYGRATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFRDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +EI
Sbjct: 226 GTIKSAVAFGALLSQGIGDTIRVSLSAPPAEEI 258
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + GALL G+GD + L P ++ +L+ +R + E VSCPSC
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEIKV----GMQILESLNLRQRRLEIVSCPSC 283
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDL 704
GR D+ +++ E+ T+ L G+++ A+MGC+VNGPGE +AD G G GK +
Sbjct: 284 GRAQVDVYKLAEEV---TAGLDGMTVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQI 339
Query: 705 YVGKTVVK 712
+V V+K
Sbjct: 340 FVKGEVIK 347
>gi|317128350|ref|YP_004094632.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cellulosilyticus DSM 2522]
gi|315473298|gb|ADU29901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cellulosilyticus DSM 2522]
Length = 367
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 150/280 (53%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG + IG + +Q+MT + T DV TV E+ R+ + G +VR+
Sbjct: 5 THRKNTRPVKVGPITIGGNDEVIIQSMTMSKTHDVDATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN +
Sbjct: 65 RAAEAIPEIK-----KRINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRK------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKAKGIPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVRLAVEAY-----EKAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G+T+R+SL+ P +E+ + L
Sbjct: 213 SGTVKSAAGLGILLNKGIGNTVRISLSADPVEEVKVAKEL 252
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 525 DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG 584
+ + ++IL+D+D HD+ + K V+ A +E ++ ++P+ H+
Sbjct: 157 ESALHHIKILEDLD----FHDIIVSM-KASDVRLAVEAYEKAAQA-FDYPL--HLGITES 208
Query: 585 IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVS 644
+ + +G LL G+G+ + + + ++ + LL+ + +S
Sbjct: 209 GTLFSGTVKSAAGLGILLNKGIGNTVRISLSADPVEEVK-VAKELLKTFGLAANAATLIS 267
Query: 645 CPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKID 703
CP+CGR DL I+ E+ E + + I+++GC VNGPGE +AD G G +
Sbjct: 268 CPTCGRIEIDLISIANEVEEYIQKINAPLKISVLGCAVNGPGEAKEADIGIAGARGEGLL 327
Query: 704 LYVGKTVVK 712
GKT+ K
Sbjct: 328 FRKGKTIRK 336
>gi|403051773|ref|ZP_10906257.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
bereziniae LMG 1003]
gi|445414102|ref|ZP_21433827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. WC-743]
gi|444764921|gb|ELW89226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. WC-743]
Length = 371
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI +Q+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISIQSMTNTETCDVDATVAQIQRCADVGADIMRVSVPTMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K +PLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 68 AEAFGEIR-----KRVTVPLVADIHFDYKIALKVADMGADCLRINPGNIGS--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V + + ++RIG N GSL I YG+ + + ++ESA
Sbjct: 114 -------------EAKIREVVAAARHHDISMRIGVNAGSLEKDIQKKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL A++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSAQI-----DNPLHLGVTEAGVYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAI +G LL +G+GDT+R+SL PE+E+
Sbjct: 216 SVKSAIALGGLLMEGIGDTMRISLAAEPEEEV 247
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 542 ILHDLPFNEDKIGRVQA--------ARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
IL L F+E K+ V+A A RL +N L+ V G++R V
Sbjct: 166 ILDRLDFHEFKVS-VKASNVFLTMDAYRLLSAQIDNPLHLGVTEA-----GVYRTGSVKS 219
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLF 653
A +G LL++G+GD + + + + ++ F++L+ +R+ +++CPSC R F
Sbjct: 220 A-IALGGLLMEGIGDTMRISLAAEPEEEVK-IGFDILKSLSLRSNGINFIACPSCSRQEF 277
Query: 654 DLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAP 699
++ ++ + E+ + + ++++GC VNGPGE +AD G VG +P
Sbjct: 278 NVIKVMQALEERLEDIRTPMDVSVIGCKVNGPGEAKEADIGIVGASP 324
>gi|384082126|ref|ZP_09993301.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HIMB30]
Length = 374
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V IG + PI VQ+MT +T DV TV ++ I D GADLVR++V
Sbjct: 8 RRHSRQIRVGSVPIGGDAPIAVQSMTNTETCDVQATVRQIEAIVDAGADLVRVSVPTMDA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I++ + ++PLVADIHF +AL+V E D +R+NPGN
Sbjct: 68 ADAFGQIRSKV-----SVPLVADIHFDHKIALKVIELGVDCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V C+ +G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRVRAVVSSCRDHGVPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF F S+KAS + V AYR + ++ D PLHLG+TEAG G
Sbjct: 161 MRHIEILDRLDFQEFKVSLKASEIFMTVAAYRKIADQI-----DQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G+G LL DG+GDT+R+SL P +E+
Sbjct: 216 TVKSAAGLGMLLMDGIGDTLRISLAADPVEEV 247
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD L + + ++ F+LL+ R+R+ +++CPSC R
Sbjct: 217 VKSAAGLGMLLMDGIGDTLRISLAADPVEEVK-VGFDLLRSLRLRSRGINFIACPSCSRQ 275
Query: 652 LFD----LQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV 706
FD + ++ A + + + L ++A++GC+VNGPGE +AD G+ GG P + L++
Sbjct: 276 TFDVIGTMNQLEARLEDVKTPL---NVAVIGCVVNGPGEAKEADLGFTGGNPESLALFI 331
>gi|420446974|ref|ZP_14945868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-43]
gi|393063947|gb|EJB64787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-43]
Length = 359
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++ + ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASRVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|294631726|ref|ZP_06710286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. e14]
gi|292835059|gb|EFF93408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. e14]
Length = 385
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 151/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG V +G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVPVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN ++
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVRE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + GALL G+GD + L P ++ +L+ +R E VSCPSC
Sbjct: 228 IKSAVAFGALLSQGIGDTIRVSLSAPPAEEVKV----GIQILESLNLRQRGLEIVSCPSC 283
Query: 649 GRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDL 704
GR D+ +++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK +
Sbjct: 284 GRAQVDVYKLAEEV---TAGLTGMEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQI 339
Query: 705 YVGKTVVK 712
+V V+K
Sbjct: 340 FVKGEVIK 347
>gi|184201258|ref|YP_001855465.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kocuria
rhizophila DC2201]
gi|238055490|sp|B2GKS3.1|ISPG_KOCRD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|183581488|dbj|BAG29959.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kocuria
rhizophila DC2201]
Length = 388
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 159/290 (54%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T ++ T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIRVGSVGVGSDSPISVQSMTTTPTTNINATLQQIAELNAAGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P V + +RVNPGN Q E +
Sbjct: 79 ADAL-----PIIAKKSPIPVIADIHFQPKYVYAAIDAGCAGVRVNPGNIRKFDDQIEGIS 133
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ G ++RIG N GSL R++ YG +P ++ESA
Sbjct: 134 ---------------------RAAEAAGVSIRIGVNAGSLDKRLLEKYGKATPEALMESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY+LL D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEQHDFHDFKISVKHNDPVTMVRAYQLLAER-----GDWPLHLGVTEAGPALQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 228 TVKSATAFGILLSQGIGDTIRVSLSAPPVEEVKVGNQILQSLGLRPRKLE 277
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + T G LL G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 229 VKSATAFGILLSQGIGDTIRVSLSAPPVEEVK-VGNQILQSLGLRPRKLEIVSCPSCGRA 287
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ +++ E+ E +HL + +A+MGC+VNGPGE +AD G G GK ++V V
Sbjct: 288 QVDVYKLAEEVNEGLAHLTVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEV 346
Query: 711 VK 712
+K
Sbjct: 347 IK 348
>gi|384889259|ref|YP_005763561.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori v225d]
gi|297379825|gb|ADI34712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori v225d]
Length = 359
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ +SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INLISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|429769390|ref|ZP_19301500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta 470-4]
gi|429187054|gb|EKY27974.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta 470-4]
Length = 397
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+V +G PI VQ+MT T D A T+E++ ++ + GAD+VR++ E
Sbjct: 32 RRKSRQIMVGSVPVGGGAPISVQSMTNTPTADAAATLEQIRQLEEAGADIVRVSCP-DEE 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGNFADRRAQFEQLE 203
+ A F S + + +PLVADIHF + A+ +R+NPGN
Sbjct: 91 STAAF----STIAREARVPLVADIHFHYRRGIEAAQAGAACLRINPGNIGS--------- 137
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ + EV V+ + +G ++RIG N GSL ++ YG+ P MVESA
Sbjct: 138 ---------IERVREV----VQAARDHGCSMRIGVNAGSLEKELLEKYGEPCPDAMVESA 184
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI + LDFH F S+KAS+P + V AY+ L + D PLHLGVTEAG G
Sbjct: 185 LNHARILQDLDFHEFKISVKASDPFLTVAAYQQLADAI-----DCPLHLGVTEAGPLRTG 239
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G +L G+GDTIRVSL P +EI
Sbjct: 240 TIKSAIGMGNMLWSGIGDTIRVSLAADPVEEI 271
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 16/193 (8%)
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTN 597
IL DL F+E KI V+A+ + L + P+ H+ I +
Sbjct: 190 ILQDLDFHEFKIS-VKASDPFLTVAAYQQLADAIDCPL--HLGVTEAGPLRTGTIKSAIG 246
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE 657
+G +L G+GD + + + ++ F++L+ +R+ ++CPSC R F++ E
Sbjct: 247 MGNMLWSGIGDTIRVSLAADPVEEIK-VGFDILKSLGLRHRGVNIIACPSCARQGFNVIE 305
Query: 658 ISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYV-GKTVVKRGI 715
+ E+ +H+ +S++I+GC+VNGPGE D G+ GG G +Y+ GK I
Sbjct: 306 TVGILEERLAHISTAMSLSIIGCVVNGPGEALYTDVGFTGGGKGAGMVYLNGK------I 359
Query: 716 AMEQATDALIQLI 728
A +QA D +I I
Sbjct: 360 AHKQANDGMIDEI 372
>gi|294782968|ref|ZP_06748294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 1_1_41FAA]
gi|294481609|gb|EFG29384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 1_1_41FAA]
Length = 351
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 155/275 (56%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR V VGN+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ + A+A
Sbjct: 2 TRVVKVGNLKIGGNNPIIIQSMTNTNSSDVEATVKQINELEKVGCQLVRMTINNVKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE ++ +RIG N GS+ I+ Y +VESA
Sbjct: 106 ENVKK-----------VVEAAREKNIPIRIGVNSGSIEKEILEKYRKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VRLLEKFNFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALLVDG+G L L E P ++ ++ +L+ + + E +SCP+C
Sbjct: 208 VKSAIGIGALLVDGIGATLRVSLTENPVEEIKVAKE----ILKVLDLSDEGVEIISCPTC 263
Query: 649 GRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
GRT DL ++ ++ E+ + +A+MGC+VNGPGE +AD+G G I +
Sbjct: 264 GRTEIDLIGLAKQVEEEFQNEKNKFKVAVMGCVVNGPGEAREADYGIAAGRG--IGILFK 321
Query: 708 KTVVKRGIAMEQATDALIQLIKD 730
K V + ++ E + L +LI +
Sbjct: 322 KGEVVKKVSEENLLEELKKLIAE 344
>gi|31794045|ref|NP_856538.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis AF2122/97]
gi|50400946|sp|Q7TXN6.1|ISPG_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|31619640|emb|CAD96580.1| PROBABLE GCPE PROTEIN [Mycobacterium bovis AF2122/97]
Length = 387
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSRGIGDTIRVSLSAPPVEEVK-VGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANEV---TAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|402815456|ref|ZP_10865048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Paenibacillus alvei DSM 29]
gi|402506496|gb|EJW17019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Paenibacillus alvei DSM 29]
Length = 365
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR V VGNV IG + + +Q+M T T DV TV E+ R+ + G +VR+TV +
Sbjct: 3 LRHQTRAVKVGNVTIGGNNEVVIQSMCTTKTADVEATVAEIHRLEEAGCQIVRVTVNNED 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AANAIKEIK-----KRISIPLVADIHFDYRLALKAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 116 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ G+G LL G+G T+RVSL+ P +E+ R L
Sbjct: 211 GTIKSSAGLGALLSLGIGSTVRVSLSADPVEEVKVAREL 249
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
I + +GALL G+G + L P ++ R+ LL+ + + VSCP+C
Sbjct: 213 IKSSAGLGALLSLGIGSTVRVSLSADPVEEVKVARE----LLKCFGLISNAATLVSCPTC 268
Query: 649 GRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
GR DL I+ E+ E S + + ++++GC VNGPGE +AD G G
Sbjct: 269 GRLDIDLFSIANEVEEYISKVKVPIKVSVLGCAVNGPGEAREADIGIAGA 318
>gi|15610005|ref|NP_217384.1| Probable GcpE protein [Mycobacterium tuberculosis H37Rv]
gi|15842410|ref|NP_337447.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
gi|121638750|ref|YP_978974.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662711|ref|YP_001284234.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|148824059|ref|YP_001288813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|224991242|ref|YP_002645931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798043|ref|YP_003031044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254232963|ref|ZP_04926290.1| gcpE protein [Mycobacterium tuberculosis C]
gi|254365510|ref|ZP_04981555.1| gcpE protein [Mycobacterium tuberculosis str. Haarlem]
gi|254551937|ref|ZP_05142384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289444423|ref|ZP_06434167.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289448534|ref|ZP_06438278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CPHL_A]
gi|289571058|ref|ZP_06451285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T17]
gi|289575573|ref|ZP_06455800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis K85]
gi|289746668|ref|ZP_06506046.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis 02_1987]
gi|289751534|ref|ZP_06510912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T92]
gi|289754981|ref|ZP_06514359.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis EAS054]
gi|289758989|ref|ZP_06518367.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis T85]
gi|289763046|ref|ZP_06522424.1| gcpE protein [Mycobacterium tuberculosis GM 1503]
gi|297635484|ref|ZP_06953264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
gi|297732483|ref|ZP_06961601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN R506]
gi|298526338|ref|ZP_07013747.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|306789740|ref|ZP_07428062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu004]
gi|307085577|ref|ZP_07494690.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu012]
gi|308232270|ref|ZP_07415492.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu001]
gi|308369887|ref|ZP_07419398.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu002]
gi|308371162|ref|ZP_07424022.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu003]
gi|308373562|ref|ZP_07432856.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu005]
gi|308374718|ref|ZP_07437097.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu006]
gi|308375911|ref|ZP_07445503.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu007]
gi|308377157|ref|ZP_07441310.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu008]
gi|308378126|ref|ZP_07481596.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu009]
gi|308379348|ref|ZP_07485933.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu010]
gi|308380501|ref|ZP_07490150.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu011]
gi|339632877|ref|YP_004724519.1| GCPE protein [Mycobacterium africanum GM041182]
gi|375295311|ref|YP_005099578.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 4207]
gi|378772605|ref|YP_005172338.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Mexico]
gi|383308619|ref|YP_005361430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis RGTB327]
gi|385992131|ref|YP_005910429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5180]
gi|385995754|ref|YP_005914052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5079]
gi|385999653|ref|YP_005917952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CTRI-2]
gi|392387494|ref|YP_005309123.1| gcpE [Mycobacterium tuberculosis UT205]
gi|392431519|ref|YP_006472563.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 605]
gi|397674786|ref|YP_006516321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Rv]
gi|422813924|ref|ZP_16862293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CDC1551A]
gi|424805208|ref|ZP_18230639.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis W-148]
gi|424948509|ref|ZP_18364205.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis NCGM2209]
gi|449064945|ref|YP_007432028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Korea 1168P]
gi|8928131|sp|O33350.1|ISPG_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166217114|sp|A1KML3.1|ISPG_MYCBP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166217115|sp|A5U6M2.1|ISPG_MYCTA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806882|sp|C1AFY4.1|ISPG_MYCBT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|13882711|gb|AAK47261.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis CDC1551]
gi|121494398|emb|CAL72879.1| Probable gcpE protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124602022|gb|EAY61032.1| gcpE protein [Mycobacterium tuberculosis C]
gi|134151023|gb|EBA43068.1| gcpE protein [Mycobacterium tuberculosis str. Haarlem]
gi|148506863|gb|ABQ74672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|148722586|gb|ABR07211.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis F11]
gi|224774357|dbj|BAH27163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253319546|gb|ACT24149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 1435]
gi|289417342|gb|EFD14582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289421492|gb|EFD18693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CPHL_A]
gi|289540004|gb|EFD44582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis K85]
gi|289544812|gb|EFD48460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T17]
gi|289687196|gb|EFD54684.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis 02_1987]
gi|289692121|gb|EFD59550.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T92]
gi|289695568|gb|EFD62997.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis EAS054]
gi|289710552|gb|EFD74568.1| gcpE protein [Mycobacterium tuberculosis GM 1503]
gi|289714553|gb|EFD78565.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis T85]
gi|298496132|gb|EFI31426.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|308214441|gb|EFO73840.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu001]
gi|308326111|gb|EFP14962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu002]
gi|308329615|gb|EFP18466.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu003]
gi|308333754|gb|EFP22605.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu004]
gi|308337148|gb|EFP25999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu005]
gi|308340958|gb|EFP29809.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu006]
gi|308344791|gb|EFP33642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu007]
gi|308348739|gb|EFP37590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu008]
gi|308353509|gb|EFP42360.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu009]
gi|308357305|gb|EFP46156.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu010]
gi|308361191|gb|EFP50042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu011]
gi|308364884|gb|EFP53735.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu012]
gi|323718478|gb|EGB27649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CDC1551A]
gi|326904484|gb|EGE51417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis W-148]
gi|328457816|gb|AEB03239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 4207]
gi|339295708|gb|AEJ47819.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5079]
gi|339299324|gb|AEJ51434.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5180]
gi|339332233|emb|CCC27943.1| putative GCPE protein [Mycobacterium africanum GM041182]
gi|341602788|emb|CCC65466.1| probable gcpE protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|344220700|gb|AEN01331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CTRI-2]
gi|356594926|gb|AET20155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Mexico]
gi|358233024|dbj|GAA46516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis NCGM2209]
gi|378546045|emb|CCE38324.1| gcpE [Mycobacterium tuberculosis UT205]
gi|380722572|gb|AFE17681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis RGTB327]
gi|392052928|gb|AFM48486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 605]
gi|395139691|gb|AFN50850.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Rv]
gi|440582346|emb|CCG12749.1| putative GCPE protein [Mycobacterium tuberculosis 7199-99]
gi|444896409|emb|CCP45670.1| Probable GcpE protein [Mycobacterium tuberculosis H37Rv]
gi|449033453|gb|AGE68880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 387
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 235 GALLSRGIGDTIRVSLSAPPVEEVK-VGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTL 293
Query: 659 SAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRG 714
+ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 294 ANEV---TAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVRGEVIKT- 348
Query: 715 IAMEQATDALIQ 726
+ Q + LI+
Sbjct: 349 VPEAQIVETLIE 360
>gi|385220553|ref|YP_005782025.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori India7]
gi|317009360|gb|ADU79940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori India7]
Length = 359
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVGACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|453364574|dbj|GAC79851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
malaquae NBRC 108250]
Length = 384
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+H I VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQIQVGSVGVGSDHQISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLKKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQS-----DYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 228 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 GRAQVDVYKLANEVSAGLEGLEVPLR 311
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 592 IGAGTNVGALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCG 649
I + G+LL +G+GD + L AP + + D +LQ +R K E VSCPSCG
Sbjct: 230 IKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCG 286
Query: 650 RTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
R D+ +++ E+ L + +A+MGC+VNGPGE +AD G G GK +++
Sbjct: 287 RAQVDVYKLANEVSAGLEGLEVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFIKG 345
Query: 709 TVVK 712
VVK
Sbjct: 346 EVVK 349
>gi|333908811|ref|YP_004482397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
posidonica IVIA-Po-181]
gi|333478817|gb|AEF55478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
posidonica IVIA-Po-181]
Length = 370
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R +MVG+V +G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRQSRQIMVGDVPVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + +IPLVADIHF +AL+VAE D +R+NPGN ++
Sbjct: 69 AEAFKRIREEV-----SIPLVADIHFDYKIALKVAEYGVDCLRINPGNIGNK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------DRVRAVVDCARDKNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F + +LDFH + S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIQYFDELDFHEYKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTLRVSLAADPVQEI 248
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL+DG+GD L + ++ +++L+ ++R+ +++CPSC R
Sbjct: 218 VKSSIGLGLLLMDGIGDTLRVSLAADPVQEIK-VGWDMLRSLKLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 708
FD+ + E+ E+ + + +A++GCIVNGPGE +AD G GG P + GK
Sbjct: 277 NFDVIKTMNELEERLEDVTIPMDVAVIGCIVNGPGEAKEADIGLTGGTPNNLIYQDGK 334
>gi|15611636|ref|NP_223287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori J99]
gi|8928165|sp|Q9ZLL0.1|ISPG_HELPJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|4155121|gb|AAD06152.1| putative [Helicobacter pylori J99]
Length = 359
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRFKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL++G+GD + + G+ + ++ L R++ ++SCP+CGR
Sbjct: 212 IKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKEG-INWISCPTCGRI 270
Query: 652 LFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L ++++++ ++ SH+ + I++MGC+VN GE AD G + + GK +
Sbjct: 271 EANLVDMASKVEKRLSHIKTPLDISVMGCVVNALGEAKHADMAIAFGNRSGLIIKEGKVI 330
Query: 711 VK 712
K
Sbjct: 331 HK 332
>gi|404403285|ref|ZP_10994869.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fuscovaginae UPB0736]
Length = 369
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNLI 328
>gi|337750710|ref|YP_004644872.1| protein IspG [Paenibacillus mucilaginosus KNP414]
gi|379723758|ref|YP_005315889.1| protein IspG [Paenibacillus mucilaginosus 3016]
gi|386726510|ref|YP_006192836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
mucilaginosus K02]
gi|336301899|gb|AEI45002.1| IspG [Paenibacillus mucilaginosus KNP414]
gi|378572430|gb|AFC32740.1| IspG [Paenibacillus mucilaginosus 3016]
gi|384093635|gb|AFH65071.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
mucilaginosus K02]
Length = 369
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 151/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T V VGN+ IG + + +Q+M T T DV TV E+ R+ + G +VR+TV K
Sbjct: 4 RTETVPVRVGNLTIGGSNDVIIQSMCTTKTADVKATVAEIHRLEEAGCQIVRVTVNNKEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +AL E DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----KQISIPLVADIHFDHRLALMAIENGIDKVRINPGNIGRR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V+ CK+ G +RIG N GSL + ++ YG +P MVESA
Sbjct: 111 --------------EKVEAVVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF + + S+KAS+ + + AY + + YPLHLG+TEAG G
Sbjct: 157 LYHIGILEELDFRDIIVSLKASDVPMAIAAYTKAAS-----AFKYPLHLGITEAGTLFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G TIR+SL+ P +E+ CR L
Sbjct: 212 TVKSAAGLGALLSMGIGSTIRISLSADPVEEVKVCREL 249
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 592 IGAGTNVGALLVDGLGDGL---LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSC 648
+ + +GALL G+G + L P ++ R+ LL+ + VSCP+C
Sbjct: 213 VKSAAGLGALLSMGIGSTIRISLSADPVEEVKVCRE----LLKSFGLITNAATLVSCPTC 268
Query: 649 GRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
GR DL I+ E+ S L + ++++GC VNGPGE +AD G + GA G+ L+
Sbjct: 269 GRLDIDLFSIANEVEAYISKLKVPIKVSVLGCAVNGPGEAREADIG-IAGARGEGMLF 325
>gi|326382910|ref|ZP_08204600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
neofelifaecis NRRL B-59395]
gi|326198500|gb|EGD55684.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
neofelifaecis NRRL B-59395]
Length = 384
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+M T T DV T++++ ++ G D+VR+ + +
Sbjct: 20 RRKTRQIRVGDVGVGSDFPISVQSMCTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ + IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----PIIARKSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRLMEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +L +R +L+ P
Sbjct: 228 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLEIVSCP--SC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG E+ R
Sbjct: 286 GRAQVDVYKLAEEVSAGLEGMEIPLR 311
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 13/127 (10%)
Query: 592 IGAGTNVGALLVDGLGDGL--LLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCG 649
I + GALL +G+GD + L AP + + D +LQ +R K E VSCPSCG
Sbjct: 230 IKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDA---ILQSLNLRPRKLEIVSCPSCG 286
Query: 650 RTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLY 705
R D+ +++ E+ ++ L G+ I A+MGC+VNGPGE +AD G G GK ++
Sbjct: 287 RAQVDVYKLAEEV---SAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIF 342
Query: 706 VGKTVVK 712
V V+K
Sbjct: 343 VKGEVIK 349
>gi|319935453|ref|ZP_08009890.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 29_1]
gi|319809669|gb|EFW06082.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 29_1]
Length = 352
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 183/337 (54%), Gaps = 49/337 (14%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T++ VGN+ +G + +Q+M TKD T+ +++++ G ++VR+ V +
Sbjct: 2 LRHETKSFKVGNLTLGGNQHVIIQSMCNTKTKDTKNTINQILKLEAAGCEMVRVAVFDED 61
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A A S +QK+ +IPL+ADIHF +AL E DKIR+NPGN
Sbjct: 62 DAKAI-----STIQKSIHIPLIADIHFDYKLALIAIENGIDKIRINPGNIGS-------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
I++V +VE C+K +RIG N GSL I+ YG+ + +GM+ES
Sbjct: 109 -------------IDKV-KAVVEACQKKHIPIRIGVNSGSLEKDILQKYGNPTAQGMIES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I L+FH++ S+K+SN ++ ++AY+L +D PLH+GVTEAG
Sbjct: 155 AKKHIDILESLNFHDYAISLKSSNTLLTIEAYQL-----ASQTFDCPLHIGVTEAGTKLG 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEE-- 379
G +KS++GIGTLL G+G+TIRVSL++ P +EI + L ++ EL + V
Sbjct: 210 GTIKSSLGIGTLLYQGIGNTIRVSLSDDPIEEIKVAKTL----LKELELIENVPTLVSCP 265
Query: 380 -KHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSV 415
R +D +PI E E D+ +H+D +V
Sbjct: 266 TCGRIQYDL------IPIASEIE--DFLNTIHKDITV 294
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL G+G+ + + + ++ + LL+ + VSCP+CGR
Sbjct: 212 IKSSLGIGTLLYQGIGNTIRVSLSDDPIEEIK-VAKTLLKELELIENVPTLVSCPTCGRI 270
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGG 697
+DL I++EI + T H +++AIMGC VNGPGE AD GG
Sbjct: 271 QYDLIPIASEIEDFLNTIH-KDITVAIMGCAVNGPGEAKHADIAIAGG 317
>gi|398965248|ref|ZP_10680875.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM30]
gi|398147363|gb|EJM36073.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM30]
Length = 369
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
+ + +G LL +G+GD + + + ++ +++L+ +R+ +++CPSC R
Sbjct: 218 VKSAVGLGMLLAEGIGDTIRISLAADPVEEVK-VGYDILKSLHLRSRGINFIACPSCSRQ 276
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKI 702
FD+ + E+ + L + +A++GC+VNGPGE +A G GG P I
Sbjct: 277 NFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNLI 328
>gi|354613703|ref|ZP_09031611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora paurometabolica YIM 90007]
gi|353221942|gb|EHB86272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora paurometabolica YIM 90007]
Length = 383
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 159/290 (54%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT +T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSDHPVSVQSMTTTETADVNATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + +G +RIG N GSL R+M+ +G +P + ESA
Sbjct: 121 ---------IKKFDDKVAEIARAAGDHGVPIRIGVNAGSLDPRLMAKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
+KS++ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+
Sbjct: 227 TVKSSVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILESLNLRPRKLE 276
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
R +E L+E ++P+ H+ + + GALL G+GD + + +
Sbjct: 200 RAYEILAEQ-CDYPL--HLGVTEAGPAFQGTVKSSVAFGALLRQGIGDTIRVSLSAPPVE 256
Query: 621 FLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGC 679
++ +L+ +R K E VSCPSCGR D+ +++ E+ + + + +A+MGC
Sbjct: 257 EVK-VGAQILESLNLRPRKLEIVSCPSCGRAQVDVYKLADEVTAGLADMEVPLRVAVMGC 315
Query: 680 IVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 726
+VNGPGE +AD G G GK ++V V+K + Q + LI+
Sbjct: 316 VVNGPGEAREADLGVASGN-GKGQIFVKGEVIKT-VPEHQIVETLIE 360
>gi|167969497|ref|ZP_02551774.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|294994039|ref|ZP_06799730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 210]
gi|313659816|ref|ZP_07816696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN V2475]
gi|379029191|dbj|BAL66924.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
Length = 381
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 12 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 72 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 116 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 220 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + GALL G+GD + + + ++ +L+ +R E VSCPSCGR
Sbjct: 222 IKSAVAFGALLSRGIGDTIRVSLSAPPVEEVK-VGNQVLESLNLRPRSLEIVSCPSCGRA 280
Query: 652 LFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG 707
D+ ++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 281 QVDVYTLANEV---TAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVR 336
Query: 708 KTVVKRGIAMEQATDALIQ 726
V+K + Q + LI+
Sbjct: 337 GEVIKT-VPEAQIVETLIE 354
>gi|381396961|ref|ZP_09922375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Microbacterium laevaniformans OR221]
gi|380775920|gb|EIC09210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Microbacterium laevaniformans OR221]
Length = 376
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG V +G + P+ VQ+MTT T ++ T++++ + G ++VR+ V + +
Sbjct: 11 RRKSRQIKVGKVLVGGDAPVSVQSMTTTPTTNINATLQQIAELTASGCEIVRVAVPSQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
AD ++ K IP++ADIHF P + A C +RVNPGN
Sbjct: 71 ADVLH-----IIAKKSQIPVIADIHFQPKYVFQAIDAGC-GAVRVNPGN----------- 113
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 114 ----------IRKFDDQVGAIAKAAKDAGVSLRIGVNAGSLDKRLLEKYGKATPEALVES 163
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PVVMV+AYR+L D+PLHLGVTEAG
Sbjct: 164 AVWEASLFEEHDFHDFKISVKHNDPVVMVKAYRMLAER-----GDWPLHLGVTEAGPAFQ 218
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
G +KSA G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+
Sbjct: 219 GTIKSATAFGILLGEGIGDTIRVSLSAPPAEEVKVGHQILQSLNLRERKLE 269
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T G LL +G+GD + + + ++ +LQ +R K E VSCPSCGR
Sbjct: 221 IKSATAFGILLGEGIGDTIRVSLSAPPAEEVK-VGHQILQSLNLRERKLEIVSCPSCGRA 279
Query: 652 LFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT 709
D+ ++ ++ + K +P + +A+MGC+VNGPGE +AD G G GK ++V
Sbjct: 280 QVDVYTLANDVTDGLKDMTVP-LRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGE 337
Query: 710 VVK 712
V+K
Sbjct: 338 VIK 340
>gi|188587879|ref|YP_001920612.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum E3 str. Alaska E43]
gi|188498160|gb|ACD51296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum E3 str. Alaska E43]
Length = 349
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 149/272 (54%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGN+ +G + PI +Q+MTT DT++V T+ ++ + + G D+VR V
Sbjct: 3 RRISRKVKVGNIYVGGDAPITIQSMTTTDTRNVEDTLNQINNLYEAGCDIVRCAVLDMDA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI IP+VADIHF +AL E +R+NPGN
Sbjct: 63 AKALKEITTK-----SKIPVVADIHFDYRLALESIESGVSALRINPGNIGS--------- 108
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE + EKCK+ +RIG N GSL I+ G + G+VESA
Sbjct: 109 -------------EERIKLVAEKCKEKNIPIRIGVNSGSLEKDILERDGKPTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KL+FH+ + S+K+S+ V+M+ YRL+ + DYPLHLGVTE+G G
Sbjct: 156 LRHVEILEKLNFHDIVISIKSSDVVMMIDCYRLIGDK-----CDYPLHLGVTESGTVTKG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIGTLL +G+GDTIRVSLT P EI
Sbjct: 211 TIKSSIGIGTLLAEGIGDTIRVSLTSDPVDEI 242
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G LL +G+GD + + D ++ +L+ ++ +VSCP+CGRT
Sbjct: 212 IKSSIGIGTLLAEGIGDTIRVSLTSDPVDEIK-VGIEILKSLGLKKGGVNFVSCPTCGRT 270
Query: 652 LFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
+L +I+ E+ ++ + + +A+MGC+VNGPGE +AD G GG I G+ +
Sbjct: 271 QINLIKIANEVEKRLENCNKDIKVAVMGCVVNGPGEAREADIGIAGGKGEGIIFKKGEII 330
Query: 711 VKRGIAMEQATDALIQLIKD 730
K + E+ +AL++ I +
Sbjct: 331 KK--VKEEELINALMEEINN 348
>gi|420864573|ref|ZP_15327962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0303]
gi|420869363|ref|ZP_15332745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0726-RA]
gi|421040268|ref|ZP_15503276.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0116-R]
gi|392063289|gb|EIT89138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0303]
gi|392068833|gb|EIT94680.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0726-RA]
gi|392221196|gb|EIV46719.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0116-R]
Length = 395
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 149/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR +MVGNV +GS+ P+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 21 RRQTRQLMVGNVGVGSDSPVSVQSMCTTKTHDVNSTLQQIAELTASGCDIVRVACPRQED 80
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + IP++ADIHF P A C +RVNPGN
Sbjct: 81 ADALAEIA-----RKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 125 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRILGKYGKATPEALVES 173
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV AY LL A+ DYPLHLGVTEAG
Sbjct: 174 ALWEAGLFEEHGFGDIKISVKHNDPVIMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 228
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 229 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEV 261
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 658
GALL G+GD + + + ++ +L+ +R E VSCPSCGR D+ +
Sbjct: 238 GALLSKGIGDTIRVSLSAPPAEEVK-VGNQILESLNLRPRSLEIVSCPSCGRAQVDVYTL 296
Query: 659 SAEIREKTSHL--PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIA 716
+ + L P + +A+MGC+VNGPGE +AD G G GK ++V V+K
Sbjct: 297 ANAVSAGLEGLDVP-LRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFVKGEVIK---- 350
Query: 717 MEQATDALI--QLIKDHGRWAE 736
+ALI LI + R AE
Sbjct: 351 --TVPEALIVETLIDEAMRLAE 370
>gi|378548684|ref|ZP_09823900.1| hypothetical protein CCH26_01307 [Citricoccus sp. CH26A]
Length = 394
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQISVGRVGVGSDHPVSVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A ++ + IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AAAL-----KVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ Q E G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 RFDDQVKEIAQAASEA-----------GTSIRIGVNAGSLDKRLLEKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVM +AY LL A D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMARAYELLAAR-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +EI
Sbjct: 227 TIKSATAFGYLLGQGIGDTIRVSLSAPPVEEI 258
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + T G LL G+GD + + + ++ +LQ +R K + VSCPSCGR
Sbjct: 228 IKSATAFGYLLGQGIGDTIRVSLSAPPVEEIK-VGLQILQSLNLRERKLDIVSCPSCGRA 286
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV 710
D+ ++ E+ E L + +A+MGC+VNGPGE +AD G G GK +++ V
Sbjct: 287 QVDVYSLAEEVTEGLKDLTVPLRVAVMGCVVNGPGEAREADLGVASGN-GKGQIFIKGEV 345
Query: 711 VK 712
+K
Sbjct: 346 IK 347
>gi|166032730|ref|ZP_02235559.1| hypothetical protein DORFOR_02445 [Dorea formicigenerans ATCC
27755]
gi|346306725|ref|ZP_08848879.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans 4_6_53AFAA]
gi|166027087|gb|EDR45844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans ATCC 27755]
gi|345908083|gb|EGX77751.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans 4_6_53AFAA]
Length = 351
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 164/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ V +GNV IG +PIR+Q+MT T+DV TV +++ + G +++R V
Sbjct: 3 RDHTKEVQIGNVTIGGGNPIRIQSMTNTKTEDVEATVAQILALEKAGCEIIRCAVPNMDA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN D
Sbjct: 63 AKAIGEIK-----KQIHIPLVADIHFDYKLAIAAIENGADKIRINPGNIGD--------- 108
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ +VEK K+YG +R+G N GSL ++ Y+G + G+VESA
Sbjct: 109 -------------EQRVRAVVEKAKEYGVPIRVGVNSGSLEKHLVEKYHGVTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ ++ ++ ++N + S+K+S+ ++ V+A+ L+ + YPLH+G+TEAG G
Sbjct: 156 LDKIQLIEEMGYNNLVVSIKSSDVMMCVKAHELIAKK-----CPYPLHVGITEAGTLLAG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR-RLANLGMRAAELQ 371
+KS++G+G +L G+GDTIRVSLT P +EI + L LG+R ++
Sbjct: 211 NIKSSVGLGLILGQGIGDTIRVSLTGSPLEEIKTAKIILKTLGLRTGGIE 260
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRT 651
I + +G +L G+GD + + G + ++ T+ +L+ +R E VSCP+CGRT
Sbjct: 212 IKSSVGLGLILGQGIGDTIRVSLTGSPLEEIK-TAKIILKTLGLRTGGIEVVSCPTCGRT 270
Query: 652 LFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697
DL ++ ++ E + +P + +A+MGC+VNGPGE +AD G GG
Sbjct: 271 QIDLIGLANQVEEMVADIPLDIKVAVMGCVVNGPGEAKEADIGIAGG 317
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,628,865,899
Number of Sequences: 23463169
Number of extensions: 505008168
Number of successful extensions: 1287834
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1267646
Number of HSP's gapped (non-prelim): 6562
length of query: 741
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 591
effective length of database: 8,839,720,017
effective search space: 5224274530047
effective search space used: 5224274530047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)