Query         004629
Match_columns 741
No_of_seqs    187 out of 961
Neff          3.8 
Searched_HMMs 13730
Date          Tue Mar 26 21:46:44 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m2/004629.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H2_122-125//hhsearch_scop/004629hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1aopa4 d.134.1.1 (A:426-570)   97.5 8.8E-05 6.4E-09   49.1   5.5   90  641-731     5-113 (145)
  2 d2v4jb3 d.134.1.1 (B:136-208,B  96.8   0.005 3.6E-07   37.0   9.0   93  640-733     5-128 (177)
  3 d2akja4 d.134.1.1 (A:175-345)   96.7  0.0045 3.3E-07   37.3   8.2   92  641-733     6-127 (171)
  4 d1vr6a1 c.1.10.4 (A:1-338) 3-d  96.6   0.024 1.8E-06   32.3  11.0  148   87-283    79-238 (338)
  5 d3c7ba3 d.134.1.1 (A:167-238,A  96.5  0.0041   3E-07   37.6   7.0   93  642-735     6-126 (185)
  6 d2akja3 d.134.1.1 (A:431-556)   96.5  0.0059 4.3E-07   36.5   7.4   93  640-733     6-123 (126)
  7 d1zj8a3 d.134.1.1 (A:407-555)   96.3  0.0066 4.8E-07   36.2   6.8   91  641-732     7-130 (149)
  8 d2v4ja3 d.134.1.1 (A:168-241,A  96.2  0.0084 6.1E-07   35.5   7.0   95  641-736     6-129 (189)
  9 d1zj8a4 d.134.1.1 (A:162-326)   95.8   0.059 4.3E-06   29.6   9.8   93  641-736     6-124 (165)
 10 d3bofa1 c.1.21.2 (A:301-560) C  95.6    0.07 5.1E-06   29.1  15.2  181  101-320    13-213 (260)
 11 d1gqna_ c.1.10.1 (A:) Type I 3  95.3   0.085 6.2E-06   28.5  14.1  205   89-337     2-226 (252)
 12 d1kkoa1 c.1.11.2 (A:161-411) b  94.6    0.13 9.7E-06   27.2   9.5  119   97-237    68-198 (251)
 13 d1ajza_ c.1.21.1 (A:) Dihydrop  94.6    0.14   1E-05   27.1  14.7  211  115-363    35-268 (282)
 14 d1kcza1 c.1.11.2 (A:161-413) b  93.9    0.19 1.4E-05   26.2  10.3  102  114-237    88-198 (253)
 15 d3c7bb3 d.134.1.1 (B:123-196,B  93.3    0.23 1.7E-05   25.5   8.1   66  640-707     7-82  (179)
 16 d1tx2a_ c.1.21.1 (A:) Dihydrop  93.1    0.25 1.8E-05   25.3  17.7  207  115-363    39-266 (273)
 17 d1f6ya_ c.1.21.2 (A:) Methylte  92.7    0.28 2.1E-05   25.0  17.4  168  115-315    22-199 (262)
 18 d2chra1 c.1.11.2 (A:127-370) C  92.6     0.2 1.5E-05   26.0   6.7  105  114-243    14-125 (244)
 19 d1aopa3 d.134.1.1 (A:149-345)   86.7    0.84 6.1E-05   21.7   8.5   96  641-737     6-154 (197)
 20 d1gqna_ c.1.10.1 (A:) Type I 3  85.5    0.95 6.9E-05   21.3   8.3   19  336-355    13-31  (252)
 21 d1nu5a1 c.1.11.2 (A:127-369) C  82.5     1.3 9.2E-05   20.5   9.2  106  115-244    15-126 (243)
 22 d2g0wa1 c.1.15.4 (A:10-284) Hy  80.7     1.5 0.00011   20.1   9.6   61  102-165     2-66  (275)
 23 d1i60a_ c.1.15.4 (A:) Hypothet  80.3     1.5 0.00011   20.0  12.8  153  104-284     3-176 (278)
 24 d1muca1 c.1.11.2 (A:131-372) M  78.4     1.7 0.00012   19.6   8.8   69  113-184    13-87  (242)
 25 d1yx1a1 c.1.15.7 (A:3-252) Hyp  71.5     2.5 0.00018   18.4   5.8   58  102-162     2-63  (250)
 26 d1jpdx1 c.1.11.2 (X:114-321) L  67.7       3 0.00022   17.9  10.0   80  102-185     2-83  (208)
 27 d1ad1a_ c.1.21.1 (A:) Dihydrop  62.7     3.7 0.00027   17.3  19.6  206  114-362    22-250 (264)
 28 d1sjda1 c.1.11.2 (A:126-367) N  57.2     4.6 0.00034   16.6   8.9  104  115-243    15-120 (242)
 29 d1vpxa_ c.1.10.1 (A:) Decameri  56.3     4.2 0.00031   16.9   3.0   27  103-133    55-81  (218)
 30 d1eyea_ c.1.21.1 (A:) Dihydrop  54.8       5 0.00037   16.4  19.0  170  114-314    21-207 (270)
 31 d1rvka1 c.1.11.2 (A:127-381) H  50.5     5.9 0.00043   15.9   8.5  105  115-243    22-137 (255)
 32 d2gl5a1 c.1.11.2 (A:123-400) P  50.3     5.9 0.00043   15.9   8.4  150  173-362    32-190 (278)
 33 d1jpma1 c.1.11.2 (A:126-359) L  48.0     6.4 0.00047   15.7  10.0   65  114-181    13-82  (234)
 34 d1vlia2 c.1.10.6 (A:2-296) Spo  48.0     6.4 0.00047   15.7  12.9   54   90-143     2-56  (295)
 35 d1wufa1 c.1.11.2 (A:1127-1370)  47.4     6.5 0.00047   15.6   7.4  105  115-243    15-119 (244)
 36 d1wuea1 c.1.11.2 (A:1127-1367)  43.3     7.5 0.00055   15.2   5.6  136  115-274    15-159 (241)
 37 d1r6wa1 c.1.11.2 (A:100-320) O  38.9     3.8 0.00028   17.2   0.5  134  116-275    14-159 (221)
 38 d1leha1 c.2.1.7 (A:135-364) Le  34.4      10 0.00074   14.2   2.8   45  254-299    16-61  (230)
 39 d1sfla_ c.1.10.1 (A:) Type I 3  33.4      11 0.00077   14.1   7.9  172  116-326    13-200 (236)
 40 d1r0ma1 c.1.11.2 (A:133-375) N  33.3      11 0.00077   14.1   8.9  104  114-243    14-119 (243)
 41 d2q02a1 c.1.15.4 (A:1-271) Put  32.9      11 0.00079   14.1   8.6   58  104-165     8-69  (271)
 42 d2zdra2 c.1.10.6 (A:2-281) Cap  32.9      11 0.00079   14.1  13.7   55   88-142     3-58  (280)
 43 d2zcta1 c.47.1.10 (A:6-242) Pe  31.1      12 0.00084   13.9   4.3   80   97-176    25-108 (237)
 44 d1jfla1 c.78.2.1 (A:1-115) Asp  30.8      12 0.00085   13.9   3.2   42  117-165    60-101 (115)
 45 d2hfda1 c.47.1.20 (A:1-132) Hy  29.6     7.3 0.00054   15.2   0.7   83  644-740    47-129 (132)
 46 d2flia1 c.1.2.2 (A:3-219) D-ri  28.9      13 0.00091   13.6   9.5   15  124-138    75-89  (217)
 47 d2gdqa1 c.1.11.2 (A:119-374) H  28.6      13 0.00092   13.6   6.2   67  115-184    20-91  (256)
 48 d1l6wa_ c.1.10.1 (A:) Decameri  28.6      13 0.00092   13.6   3.5   27  101-131    53-79  (220)
 49 d1eepa_ c.1.5.1 (A:) Inosine m  26.7      14 0.00099   13.4   6.0   73  263-350   153-225 (388)
 50 d1zfja1 c.1.5.1 (A:2-94,A:221-  24.7      15  0.0011   13.1  11.1   58  120-181   108-168 (365)
 51 d1yeya1 c.1.11.2 (A:184-435) R  23.9      15  0.0011   13.0   7.5   67  115-184    14-84  (252)
 52 d1vrda1 c.1.5.1 (A:1-85,A:213-  22.6      16  0.0012   12.9  11.0   62  121-186   100-165 (330)
 53 d1bf6a_ c.1.9.3 (A:) Phosphotr  21.6      17  0.0012   12.7   6.6  130  115-277    30-179 (291)
 54 d1jr1a1 c.1.5.1 (A:17-112,A:23  20.3      18  0.0013   12.6   7.9   20  101-120    46-65  (378)

No 1  
>d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]}
Probab=97.48  E-value=8.8e-05  Score=49.08  Aligned_cols=90  Identities=26%  Similarity=0.461  Sum_probs=66.1

Q ss_pred             EEECCC---CCCCCCCCH----HHHHHHHHHHH-CC--CC-CCEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCE
Q ss_conf             343288---886664358----99999999984-59--99-928998611443999878886055438895067553655
Q 004629          641 EYVSCP---SCGRTLFDL----QEISAEIREKT-SH--LP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKT  709 (741)
Q Consensus       641 e~ISCP---sCGRTlfDL----q~~~~~Ik~~t-~h--Lk-gvkIAVMGCIVNGPGEmadAD~GyvGg~pgki~Ly~gke  709 (741)
                      ..||||   .|.--..|-    .++..++.+.. .|  .+ ++||+|=|| .|+=|+.--+|+|++|..++...+|.|+.
T Consensus         5 ~~vAC~G~~~C~~gi~dtk~~a~~l~~~l~~~~~~~~~~~~~~kI~vSGC-~n~C~~~~~~DIG~~g~~~~~~~i~~GG~   83 (145)
T d1aopa4           5 NSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGC-PNGCGRAMLAEVGLVGKAPGRYNLHLGGN   83 (145)
T ss_dssp             TEEECCCTTTCTTCSSCSTTTHHHHHHHHHHHHHHTTCTTCCCCEEEESS-TTCTTCGGGSSEEEEEEETTEEEEEECCC
T ss_pred             CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCCCCCCEECCEEEEEECCCCEEEEECCC
T ss_conf             50658764467788999999999999999988764266667638998469-99975430456668972388248984477


Q ss_pred             --------EEEECCCHHHHHHHHHHHHHHC
Q ss_conf             --------4553588237999999999960
Q 004629          710 --------VVKRGIAMEQATDALIQLIKDH  731 (741)
Q Consensus       710 --------~V~~~Ipeeeavd~Li~lIk~~  731 (741)
                              .+...||.+++.+.+..+++.+
T Consensus        84 ~~~~r~g~~~~~~v~~~ev~~~v~~il~~Y  113 (145)
T d1aopa4          84 RIGTRIPRMYKENITEPEILASLDELIGRW  113 (145)
T ss_dssp             TTSCSCCEEEEEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEECCCCHHHHHHHHHHHHHHH
T ss_conf             777743132124689899999999999999


No 2  
>d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]}
Probab=96.82  E-value=0.005  Score=37.01  Aligned_cols=93  Identities=20%  Similarity=0.289  Sum_probs=61.2

Q ss_pred             CEEECCCC---CCCCCCCHHHHHHHHHHHH----C--CCC-CCEEEEEEEEECCCCCCCCCCEEEECC-CCCEEEEEECC
Q ss_conf             33432888---8666435899999999984----5--999-928998611443999878886055438-89506755365
Q 004629          640 TEYVSCPS---CGRTLFDLQEISAEIREKT----S--HLP-GVSIAIMGCIVNGPGEMADADFGYVGG-APGKIDLYVGK  708 (741)
Q Consensus       640 te~ISCPs---CGRTlfDLq~~~~~Ik~~t----~--hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg-~pgki~Ly~gk  708 (741)
                      .++++||+   |-....|-+..++.+.+.+    .  .+| .+||+|=|| -|+=|..--+|+|+.|. .+....+|.++
T Consensus         5 ~~i~~c~g~~~C~~~~~d~~~~~~al~del~~~~~~~~lp~k~kI~vSGC-pn~C~~~~i~DIGi~G~~~~~g~~~~~g~   83 (177)
T d2v4jb3           5 SNIVHTQGWVHCHTPATDASGPVKAIMDEVFEDFQSMRLPAPVRISLACC-INMCGAVHCSDIGVVGIHRGDGVVIMVGG   83 (177)
T ss_dssp             CCCBCCCGGGTCSSCSSCSHHHHHHHHHHHHHHHSCCCSSSCBCEEEESS-TTCCSSGGGSSEEEEEECCTCEEEEEECC
T ss_pred             CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC-CCCCCCCCCCCEEEEEEECCCCCEEEECC
T ss_conf             87363888062577132677999999999999850132134454340489-98665524388647757637883467566


Q ss_pred             EEE------------E-----ECCCHHHH---HHHHHHHHHHCCC
Q ss_conf             545------------5-----35882379---9999999996066
Q 004629          709 TVV------------K-----RGIAMEQA---TDALIQLIKDHGR  733 (741)
Q Consensus       709 e~V------------~-----~~Ipeeea---vd~Li~lIk~~g~  733 (741)
                      ...            .     ..++.+++   ++++++.=+++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~~~v~~il~~y~~~~~  128 (177)
T d2v4jb3          84 KVSNRISMPKFSKVVVAYIPNEPPRWPSLTKTIKHIIEVYSANAY  128 (177)
T ss_dssp             BCCCSSSCCBCCEEEEEEEECCTTTCHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             212456444212233033545566630257899999999999676


No 3  
>d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=96.73  E-value=0.0045  Score=37.30  Aligned_cols=92  Identities=17%  Similarity=0.253  Sum_probs=65.9

Q ss_pred             EEECCCCCCCC---CCCHHHHHHHHHHHH-C---------CCC-CCEEEEEEEEECCCCCCCCCCEEEECC---CCCEEE
Q ss_conf             34328888666---435899999999984-5---------999-928998611443999878886055438---895067
Q 004629          641 EYVSCPSCGRT---LFDLQEISAEIREKT-S---------HLP-GVSIAIMGCIVNGPGEMADADFGYVGG---APGKID  703 (741)
Q Consensus       641 e~ISCPsCGRT---lfDLq~~~~~Ik~~t-~---------hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg---~pgki~  703 (741)
                      +.++||.+|.+   +||.+.++.++.+.+ .         .|| -+||+|=||. |.=++.--.|+|+++.   +.....
T Consensus         6 Nv~~~P~aGv~~~e~~D~~pla~~l~~~~~~~~~~~~~~~~LPrKfKi~isGc~-~~c~~~~~~DIG~~~~~~~g~~gf~   84 (171)
T d2akja4           6 NPVGNPLAGIDPHEIVDTRPFTNLISQFVTANSRGNLSITNLPRKWNPCVIGSH-DLYEHPHINDLAYMPATKNGKFGFN   84 (171)
T ss_dssp             CCBCCTTTTTCTTCSSCCHHHHHHHHHHHTTTTTCCGGGSCCSSCBCEEECCCT-TCTTCGGGSSEEEEEEESSSSEEEE
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCHHCEEEECCCC-CCEEEEEECCEEEEEECCCCCCEEE
T ss_conf             546798678982503687999999999998664551545547531035552786-3112113332689974047862389


Q ss_pred             EEECCEE----------EEECCCHHHHHHH---HHHHHHHCCC
Q ss_conf             5536554----------5535882379999---9999996066
Q 004629          704 LYVGKTV----------VKRGIAMEQATDA---LIQLIKDHGR  733 (741)
Q Consensus       704 Ly~gke~----------V~~~Ipeeeavd~---Li~lIk~~g~  733 (741)
                      +|.|+..          +...++.+++++-   +++.-+++|.
T Consensus        85 v~vgGg~g~~~~~~a~~~~~~v~~~~v~~~~~av~~~y~~~g~  127 (171)
T d2akja4          85 LLVGGFFSIKRCEEAIPLDAWVSAEDVVPVCKAMLEAFRDLGF  127 (171)
T ss_dssp             EEECCEECSSCEECCEEEEEEEEGGGHHHHHHHHHHHHHHHCC
T ss_pred             EEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             9996236765442532313658999999999999999999654


No 4  
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]}
Probab=96.56  E-value=0.024  Score=32.27  Aligned_cols=148  Identities=16%  Similarity=0.216  Sum_probs=106.9

Q ss_pred             CCEEEEECEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC------------CCHHHHHHHHHHHHH
Q ss_conf             72069970010289996488750589988989989999999984999999843------------998889999999986
Q 004629           87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV------------QGKREADACFEIKNS  154 (741)
Q Consensus        87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv------------p~~~~A~al~~I~~~  154 (741)
                      ....|.||++.|||++.+.+--.+.-.+.+  -..+-...+.++|..+.|-.+            ++.+..+-|.+++++
T Consensus        79 ~~t~I~v~gv~iG~~~l~lIAGPC~vES~e--~~~~~A~~lke~g~~~~r~g~fKpRtsp~sf~g~g~~gL~~l~~~k~~  156 (338)
T d1vr6a1          79 EDTVIDLGDVKIGNGYFTIIAGPCSVEGRE--MLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADK  156 (338)
T ss_dssp             SCCCEECSSCEESTTEEEEEEECSBCCCHH--HHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHH
T ss_pred             CCCEEEECCEEECCCCEEEEECCCCCCCHH--HHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             886498689898897558995578999899--999999998871844023412213333433356538789988877741


Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             00388665424156888789999833229355279987710000001334608999987768874999999999649909
Q 004629          155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV  234 (741)
Q Consensus       155 L~~~~~~iPLVADIHF~~~~Al~a~~~v~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aI  234 (741)
                           +.+|++.|+|-...+.. +++.+|-+-|---|.-.                          ..+++++.+.++|+
T Consensus       157 -----~glpvvTdV~~~~~~~~-~~e~~DilQI~A~~~~n--------------------------~~LL~~~g~t~kpV  204 (338)
T d1vr6a1         157 -----YGMYVVTEALGEDDLPK-VAEYADIIQIGARNAQN--------------------------FRLLSKAGSYNKPV  204 (338)
T ss_dssp             -----HTCEEEEECSSGGGHHH-HHHHCSEEEECGGGTTC--------------------------HHHHHHHHTTCSCE
T ss_pred             -----CCCEEEEECCCHHHHHH-HHCEEEEEEECHHHCCC--------------------------HHHHHHHHCCCCCE
T ss_conf             -----59406874052134565-42411268955022267--------------------------89999752357737


Q ss_pred             EEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             9951158876778865099916899999999999997999816999813
Q 004629          235 RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA  283 (741)
Q Consensus       235 RIGvN~GSL~~~il~~yg~tp~~mVeSAle~~~i~e~~~F~diviS~Ka  283 (741)
                      =|--.-           ..+++-|..+| |   .+...|-.++++----
T Consensus       205 ~lKkG~-----------~~s~~e~l~aa-e---~i~~~Gn~~vilcERG  238 (338)
T d1vr6a1         205 LLKRGF-----------MNTIEEFLLSA-E---YIANSGNTKIILCERG  238 (338)
T ss_dssp             EEECCT-----------TCCHHHHHHHH-H---HHHHTTCCCEEEEECC
T ss_pred             EECCCC-----------CCCHHHHHHHH-H---HHHHCCCCCCEEEECC
T ss_conf             962754-----------43245545668-9---9871588642465314


No 5  
>d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.54  E-value=0.0041  Score=37.61  Aligned_cols=93  Identities=17%  Similarity=0.340  Sum_probs=64.9

Q ss_pred             EECCCC---CCCCCCCHHHHHHHHHHHH------CCCC-CCEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCEE-
Q ss_conf             432888---8666435899999999984------5999-9289986114439998788860554388950675536554-
Q 004629          642 YVSCPS---CGRTLFDLQEISAEIREKT------SHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTV-  710 (741)
Q Consensus       642 ~ISCPs---CGRTlfDLq~~~~~Ik~~t------~hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg~pgki~Ly~gke~-  710 (741)
                      ..|||+   |-.-++|-+.++.++.++.      ..+| .+||+|=||.=|-.+...-+|+|+.|. .....+|.|+.. 
T Consensus         6 ~~AC~G~~~C~~a~~dt~~la~~L~~~f~~~~~~~~~p~k~ki~vSGCpn~C~~~~~~~d~gi~~~-~~~~~~~~gg~~g   84 (185)
T d3c7ba3           6 PSACMGPALCEFACYDTLELCYDLTMTYQDELHRPMWPYKFKIKCAGCPNDCVASKARSDFAIIGT-WRGATILIGGKAP   84 (185)
T ss_dssp             CEECCGGGTCTTCSSCHHHHHHHHHHHTHHHHHSCCSSSCBCEEEESSTTCTTCHHHHCSEEEEEE-EEEEEEEECCBCS
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECC-CCCCEEEECCCCC
T ss_conf             678989221024465399999999999865201344233322012557763145666156248634-6663475423357


Q ss_pred             --------------EEECCCHHHHH---HHHHHHHHHCCCCC
Q ss_conf             --------------55358823799---99999999606668
Q 004629          711 --------------VKRGIAMEQAT---DALIQLIKDHGRWA  735 (741)
Q Consensus       711 --------------V~~~Ipeeeav---d~Li~lIk~~g~w~  735 (741)
                                    +....+.+++.   +++++.-+++++..
T Consensus        85 ~~~g~~~~~~~~~~~~~~~~~dev~~~v~~ii~~y~e~g~~~  126 (185)
T d3c7ba3          85 FVEGAVIGWVAVPFVEVEKPYDEIKEILEAIWDWWDEEGKFR  126 (185)
T ss_dssp             TTTCCBCCEEEEEEECCCTTCHHHHHHHHHHHHHHHHHCCTT
T ss_pred             CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             678766663478885257988999999999999999868885


No 6  
>d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=96.46  E-value=0.0059  Score=36.49  Aligned_cols=93  Identities=23%  Similarity=0.514  Sum_probs=71.1

Q ss_pred             CEEECCC---CCCCCCCCHHHHHHHHHHHH---CCCC-CCEEEEEEEEECCCCCCCCCCEEEECCCCC--------EEEE
Q ss_conf             3343288---88666435899999999984---5999-928998611443999878886055438895--------0675
Q 004629          640 TEYVSCP---SCGRTLFDLQEISAEIREKT---SHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPG--------KIDL  704 (741)
Q Consensus       640 te~ISCP---sCGRTlfDLq~~~~~Ik~~t---~hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg~pg--------ki~L  704 (741)
                      -+.||||   .|-.-++|-++.+.++.+++   ..+| .+||+|=||. |+=+...-+|+|++|...+        .+++
T Consensus         6 r~~vaC~G~~~C~~~~~dt~~~a~~l~~~l~~~~~~p~k~kI~iSGCp-n~C~~~~i~DIG~~G~~~~~~~g~~~~~~~v   84 (126)
T d2akja3           6 KGLVACTGSQFCGQAIIETKARALKVTEEVQRLVSVTRPVRMHWTGCP-NSCGQVQVADIGFMGCMTRDENGKPCEGADV   84 (126)
T ss_dssp             TEEEECCGGGTCTTCSSCCHHHHHHHHHHHHHHEECSSCCEEEEESST-TCTTCGGGSSEEEEEEEEECTTCCEEEEEEE
T ss_pred             CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC-CHHHHHCCCCEEEEEEECCCCCCCCCCEEEE
T ss_conf             597647780601214877999999999998850558886489996786-5222203575689987326556664427999


Q ss_pred             EECCE---------EEEECCCHHHHHHHHHH-HHHHCCC
Q ss_conf             53655---------45535882379999999-9996066
Q 004629          705 YVGKT---------VVKRGIAMEQATDALIQ-LIKDHGR  733 (741)
Q Consensus       705 y~gke---------~V~~~Ipeeeavd~Li~-lIk~~g~  733 (741)
                      |.|+.         .+...||.+++.+.+.+ +|+.+..
T Consensus        85 ~vGG~~g~~~~~g~~~~~~v~~~~~~~~v~~~li~~y~A  123 (126)
T d2akja3          85 FVGGRIGSDSHLGDIYKKAVPCKDLVPVVAEILINQFGA  123 (126)
T ss_dssp             EECCBCSTTCBCCEEEEEEEETTTHHHHHHHHHHHHSCC
T ss_pred             EECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             967778988731326544778999999999999998544


No 7  
>d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.29  E-value=0.0066  Score=36.17  Aligned_cols=91  Identities=16%  Similarity=0.354  Sum_probs=61.5

Q ss_pred             EEECCC---CCCCCCCCHHHHHHHHHHHH--------CCCC-CCEEEEEEEEECCCCCCCCCCEEEECCCC--------C
Q ss_conf             343288---88666435899999999984--------5999-92899861144399987888605543889--------5
Q 004629          641 EYVSCP---SCGRTLFDLQEISAEIREKT--------SHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAP--------G  700 (741)
Q Consensus       641 e~ISCP---sCGRTlfDLq~~~~~Ik~~t--------~hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg~p--------g  700 (741)
                      +.+|||   .|.--.+|-+..+.++.+++        ..+| .+||+|=||- |+=+..--+|+|++|...        .
T Consensus         7 ~~vaC~G~~~C~~a~~dt~~~a~~l~~~l~~~~~~~~~~lp~k~kI~iSGCp-n~C~~~~i~DiG~~g~~~~~~~~~~~~   85 (149)
T d1zj8a3           7 NLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINSQLDVPITVNINGCP-NSCARIQIADIGFKGQMIDDGHGGSVE   85 (149)
T ss_dssp             HEEECCBTTTCTTCSSBCHHHHHHHHHHHHHHTHHHHTTCCSCCCEEEESST-TCTTCGGGSSEEEEEEEEESSSSCEEE
T ss_pred             CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC-CCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             0165777030041698699999999999999865401137975489997587-655321246604786404556567775


Q ss_pred             EEEEEECCEE----------EEECCCHHHHHHHH---HHHHHHCC
Q ss_conf             0675536554----------55358823799999---99999606
Q 004629          701 KIDLYVGKTV----------VKRGIAMEQATDAL---IQLIKDHG  732 (741)
Q Consensus       701 ki~Ly~gke~----------V~~~Ipeeeavd~L---i~lIk~~g  732 (741)
                      .+++|.|+..          +...+|.+++.+.+   ++..++++
T Consensus        86 g~~i~vGG~~g~~~~~~~~l~~~~v~~~~v~~~v~~ii~~y~~~~  130 (149)
T d1zj8a3          86 GFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHR  130 (149)
T ss_dssp             EEEEEESCBCSTTCBCCEECTTCCEETTTHHHHHHHHHHHHHHSC
T ss_pred             EEEEEECCCCCCCCHHCCEEEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             699996467887410103322121118999999999999999966


No 8  
>d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]}
Probab=96.21  E-value=0.0084  Score=35.47  Aligned_cols=95  Identities=17%  Similarity=0.268  Sum_probs=63.8

Q ss_pred             EEECCCC---CCCCCCCHHHHHHHHHHHH------CCCC-CCEEEEEEEEECCCCCC-CCCCEEEECCCCCEEEEEECCE
Q ss_conf             3432888---8666435899999999984------5999-92899861144399987-8886055438895067553655
Q 004629          641 EYVSCPS---CGRTLFDLQEISAEIREKT------SHLP-GVSIAIMGCIVNGPGEM-ADADFGYVGGAPGKIDLYVGKT  709 (741)
Q Consensus       641 e~ISCPs---CGRTlfDLq~~~~~Ik~~t------~hLk-gvkIAVMGCIVNGPGEm-adAD~GyvGg~pgki~Ly~gke  709 (741)
                      ...|||+   |-.-++|-++++.++.++.      -.+| .+||++=||.=| .+++ .-+|+|+.|..++...+|.|+.
T Consensus         6 tv~AC~G~~~C~~g~~Dt~~la~~L~~~f~~~~~~~~~p~K~Ki~vsGCpn~-C~~a~~~~Digiig~~~~g~~~~~gg~   84 (189)
T d2v4ja3           6 TPESCLGKSRCEFACYDSQAACYELTMEYQDELHRPAFPYKFKFKFDACPNG-CVASIARSDFSVIGTWKRGASILCGAK   84 (189)
T ss_dssp             CCEECCGGGSCTTCSSCHHHHHHHHHHHTHHHHHSCCSSSCBCEEEESSTTC-TTCHHHHCSEEEEEEESEEEEEEECCB
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCHHCCCCEEEEEECCCCEEEECCC
T ss_conf             8877989221100476499999999999853302335555510124766554-435211036569976326743541365


Q ss_pred             -----------EEEECCC----HHH---HHHHHHHHHHHCCCCCC
Q ss_conf             -----------4553588----237---99999999996066689
Q 004629          710 -----------VVKRGIA----MEQ---ATDALIQLIKDHGRWAE  736 (741)
Q Consensus       710 -----------~V~~~Ip----eee---avd~Li~lIk~~g~w~d  736 (741)
                                 ++...++    .++   +++++++.-++++++.|
T Consensus        85 ~~~~~G~~~g~~~~~~~~~~~~~dev~~vv~~ii~~Y~e~ak~~E  129 (189)
T d2v4ja3          85 APILDGAQMGSLLVPFVAAEEPFDEIKEVVEKIWDWWMEEGKNRE  129 (189)
T ss_dssp             CSTTTCCBCCEEEEEEECCCTTCHHHHHHHHHHHHHHHHHSCTTC
T ss_pred             CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             654467644532577513440078999999999999998196300


No 9  
>d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.80  E-value=0.059  Score=29.62  Aligned_cols=93  Identities=22%  Similarity=0.255  Sum_probs=64.3

Q ss_pred             EEECCCC---CCCCCCCHHHHHHHHHHHH------CCCC-CCEEEEEEEEECCCCCCCCCCEEEECC----CCCEEEEEE
Q ss_conf             3432888---8666435899999999984------5999-928998611443999878886055438----895067553
Q 004629          641 EYVSCPS---CGRTLFDLQEISAEIREKT------SHLP-GVSIAIMGCIVNGPGEMADADFGYVGG----APGKIDLYV  706 (741)
Q Consensus       641 e~ISCPs---CGRTlfDLq~~~~~Ik~~t------~hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg----~pgki~Ly~  706 (741)
                      +.++||.   |..-+||.+.++.++.+..      ..|| -+||+|=||.=|. .+  -.|+|+++-    +.-..++|.
T Consensus         6 NV~~~P~ag~~~~e~~D~~p~a~~i~~~~~~~~~~~~LPrKfki~vsGc~~~c-~~--~~Dig~~~~~~~~g~~Gf~v~v   82 (165)
T d1zj8a4           6 VVLGSPLAGESLDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISGLQDVA-HE--INDVAFIGVNHPEHGPGLDLWV   82 (165)
T ss_dssp             EEEECTTTTTCTTCSCCTHHHHHHHHHHHTTSGGGSSCSSCEEEEEESSSCSC-GG--GSSEEEEEEEETTTEEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHH-HH--CCCCEEEEEECCCCCCEEEEEE
T ss_conf             56769745588340238889999999998359343113445641204764777-76--2754179886057764378897


Q ss_pred             CCE---------EEEECCCHHHHHH---HHHHHHHHCCCCCC
Q ss_conf             655---------4553588237999---99999996066689
Q 004629          707 GKT---------VVKRGIAMEQATD---ALIQLIKDHGRWAE  736 (741)
Q Consensus       707 gke---------~V~~~Ipeeeavd---~Li~lIk~~g~w~d  736 (741)
                      |+.         .+...++.+++++   +++++-+++|.-.+
T Consensus        83 GGg~g~~p~~a~~l~~~v~~e~v~~~v~ai~~~y~~~g~r~~  124 (165)
T d1zj8a4          83 GGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVFRDYGYRRL  124 (165)
T ss_dssp             CCBCSSSCBCCEEEEEEECGGGHHHHHHHHHHHHHHHSCCSS
T ss_pred             EEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             585686531277874448888999999999999999676100


No 10 
>d3bofa1 c.1.21.2 (A:301-560) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.61  E-value=0.07  Score=29.14  Aligned_cols=181  Identities=17%  Similarity=0.247  Sum_probs=122.7

Q ss_pred             CCCEEEEECCCCC----------CCCHHHHHHHHHHHHHCCCCEEEEE--CCCHHHHHHHHHHHHHHCCCCCCCCEEECC
Q ss_conf             9964887505899----------8898998999999998499999984--399888999999998600388665424156
Q 004629          101 EHPIRVQTMTTND----------TKDVAGTVEEVMRIADQGADLVRIT--VQGKREADACFEIKNSLVQKNYNIPLVADI  168 (741)
Q Consensus       101 ~~PI~VQSMt~t~----------T~Dv~atv~Qi~~L~~aGceiVRvt--vp~~~~A~al~~I~~~L~~~~~~iPLVADI  168 (741)
                      ++++.|--=+|..          -.|.+..+++.++..++|++++-+-  +|+.++.+.+.++.+.+.. -+++||+-|-
T Consensus        13 ~~f~iIGEriN~tg~k~~~~~~~~~d~d~~~~~A~~qv~~GA~iLDIn~~~~~~~e~~~m~~li~~l~~-~~d~PlsIDT   91 (260)
T d3bofa1          13 DHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPY-VSNVPLSLDI   91 (260)
T ss_dssp             SSCEEEEEEECCTTCHHHHHHHHTTCSHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHH-HTCSCEEEEC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH-CCCCCCCCCC
T ss_conf             886798861766427999999986898999999999998599889862487505558999999999884-1799841268


Q ss_pred             CCCHHHHHHHHHHC-CCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
Q ss_conf             88878999983322-93552799877100000013346089999877688749999999996499099951158876778
Q 004629          169 HFAPSVALRVAECF-DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI  247 (741)
Q Consensus       169 HF~~~~Al~a~~~v-~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~i  247 (741)
                       +++.++-.|++.+ .+-=||-=|..                       ++++..+...+|++|.++=.-......    
T Consensus        92 -~~~~v~eaaLk~~~G~~iINsis~e-----------------------~~~~~~~~~l~~~yga~vI~l~~d~g~----  143 (260)
T d3bofa1          92 -QNVDLTERALRAYPGRSLFNSAKVD-----------------------EEELEMKINLLKKYGGTLIVLLMGKDV----  143 (260)
T ss_dssp             -CCHHHHHHHHHHCSSCCEEEEEESC-----------------------HHHHHHHHHHHHHHCCEEEEESCSSSC----
T ss_pred             -CCHHHHHHHHHHHCCCCEEEECCCC-----------------------CCHHHHHHHHHHHCCCCEEEEECCCCC----
T ss_conf             -9879999999983676567532355-----------------------320799999987549978998457755----


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHCCC-CCEEEE-----EECCC-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             865099916899999999999997999-816999-----81399-66999999999997610788756310124668999
Q 004629          248 MSYYGDSPRGMVESAFEFARICRKLDF-HNFLFS-----MKASN-PVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE  320 (741)
Q Consensus       248 l~~yg~tp~~mVeSAle~~~i~e~~~F-~diviS-----~KaSn-v~~~i~Ayrlla~~m~~~g~dyPLHLGVTEAG~~~  320 (741)
                          -.+++..++-+.+-++.+++.|+ ++|+|-     .|+.+ ...++++-+.+.+      ..+|+-+|+-----|.
T Consensus       144 ----p~~~~er~~~~~~~~~~~~~~g~~e~ii~DPli~~~~t~~~~~~~l~~i~~i~~------~g~~~~~GlSN~SFGl  213 (260)
T d3bofa1         144 ----PKSFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISS------KGFNTTVGLSNLSFGL  213 (260)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCGGGTCCHHHHHHHHHHHHH------TTCCBCCBGGGGGTTC
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEECCCHHHHHHHHHHHHHHHH------CCCCEEECCCCCCCCC
T ss_conf             ----224899999999999999964980763544550121423778999999999884------4740003600144798


No 11 
>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]}
Probab=95.34  E-value=0.085  Score=28.53  Aligned_cols=205  Identities=16%  Similarity=0.196  Sum_probs=123.2

Q ss_pred             EEEEECEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC---HHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             06997001028999648875058998898998999999998499999984399---888999999998600388665424
Q 004629           89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLV  165 (741)
Q Consensus        89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~---~~~A~al~~I~~~L~~~~~~iPLV  165 (741)
                      +.|.|+++.||.|-|..+=|.+-   .+.+..++|+.+....|||+|-+-+--   ..+.+.+.++.+.|++.-.++|++
T Consensus         2 ~~~~v~~~~~g~g~pkIcv~l~~---~~~~~~~~~~~~~~~~~aD~vE~RlD~l~~~~~~~~l~~~~~~lr~~~~~~PiI   78 (252)
T d1gqna_           2 KTVTVKNLIIGEGMPKIIVSLMG---RDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLL   78 (252)
T ss_dssp             CCEEETTEEETSSSCEEEEEECC---SSHHHHHHHHHHHTTSCCSEEEEEGGGCSCTTCHHHHHHHHHHHHHHCTTSCEE
T ss_pred             CEEEECCEEECCCCCEEEEEECC---CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             74898887955999879999678---999999999998743699989998700245698899999999999735799789


Q ss_pred             ECCC-------CC----HHHHH--HHHHHCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             1568-------88----78999--98332293552799877100000013346089999877688749999999996499
Q 004629          166 ADIH-------FA----PSVAL--RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR  232 (741)
Q Consensus       166 ADIH-------F~----~~~Al--~a~~~v~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~  232 (741)
                      .-+-       |.    -++.+  .+++.      +.-++.|-+                +..-++.+..+++.+++.|+
T Consensus        79 ~T~R~~~eGG~~~~~~~~~~~ll~~~~~~------~~~d~iDiE----------------l~~~~~~~~~li~~a~~~~~  136 (252)
T d1gqna_          79 FTFRSAKEGGEQTITTQHYLTLNRAAIDS------GLVDMIDLE----------------LFTGDADVKATVDYAHAHNV  136 (252)
T ss_dssp             EECCBGGGTCSBCCCHHHHHHHHHHHHHH------SCCSEEEEE----------------GGGCHHHHHHHHHHHHHTTC
T ss_pred             EEEECHHHCCCCCCCHHHHHHHHHHHHHC------CCCCEEECC----------------CCCCHHHHHHHHHHHHCCCC
T ss_conf             99835321787889999999999999971------997357120----------------22427899999998650897


Q ss_pred             EEEEEECCCCCCHHHHHHCCCCC--HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             09995115887677886509991--6899999999999997999816999813996699999999999761078875631
Q 004629          233 AVRIGTNHGSLSDRIMSYYGDSP--RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH  310 (741)
Q Consensus       233 aIRIGvN~GSL~~~il~~yg~tp--~~mVeSAle~~~i~e~~~F~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLH  310 (741)
                      .+ |+.+|-         +..||  +-|.    +.++-+.+.|-+-+++-..+.+........+...+.. +...++|+=
T Consensus       137 ~v-I~S~Hd---------f~~TP~~~~l~----~~~~~m~~~gaDivKia~~a~~~~D~~~ll~~~~~~~-~~~~~~P~I  201 (252)
T d1gqna_         137 YV-VMSNHD---------FHQTPSAEEMV----SRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQ-QHYADRPVI  201 (252)
T ss_dssp             EE-EEEEEE---------SSCCCCHHHHH----HHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHH-HHTCSSCCE
T ss_pred             EE-EEEECC---------CCCCCCHHHHH----HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH-HHCCCCCEE
T ss_conf             69-998668---------99997999999----9999999738996999966799889999999999999-707899889


Q ss_pred             CCCCCCCCCCCCCHHHHHH--HHHHHHCC
Q ss_conf             0124668999980244899--99985428
Q 004629          311 LGVTEAGEGEDGRMKSAIG--IGTLLQDG  337 (741)
Q Consensus       311 LGVTEAG~~~~G~IKSaiG--iG~LL~dG  337 (741)
                      .    =++|..|++-...+  +|+-+.-+
T Consensus       202 ~----~~MG~~G~~SRi~~~~~GS~~tya  226 (252)
T d1gqna_         202 T----MSMAKEGVISRLAGEVFGSAATFG  226 (252)
T ss_dssp             E----EECTTTTHHHHHCHHHHTCCEEEC
T ss_pred             E----EECCCCCHHHHHHHHHHCCCEEEC
T ss_conf             9----965876355999898868944853


No 12 
>d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]}
Probab=94.62  E-value=0.13  Score=27.21  Aligned_cols=119  Identities=12%  Similarity=0.110  Sum_probs=86.5

Q ss_pred             ECCCCCCEEEEECC---CCCCCCHHHHHHHHHHHHHCCCCE-EEEECCC-----HHHHHHHHHHHHHHCCCCCCCCEEEC
Q ss_conf             02899964887505---899889899899999999849999-9984399-----88899999999860038866542415
Q 004629           97 AIGSEHPIRVQTMT---TNDTKDVAGTVEEVMRIADQGADL-VRITVQG-----KREADACFEIKNSLVQKNYNIPLVAD  167 (741)
Q Consensus        97 ~IGG~~PI~VQSMt---~t~T~Dv~atv~Qi~~L~~aGcei-VRvtvp~-----~~~A~al~~I~~~L~~~~~~iPLVAD  167 (741)
                      .+|-+-.+++.---   ..-..|.+..++-+.+|.+++.++ +.+-=|=     .++.+.++.++++|.++++++|+++|
T Consensus        68 ~~G~~~~i~iD~~~~~~~~~~~~~~~ai~~l~~L~~~~~~~~l~IEqP~~~~~~~~d~~gl~~l~~~l~~~g~~vpI~~D  147 (251)
T d1kkoa1          68 SPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVAD  147 (251)
T ss_dssp             STTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred             CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf             75878512320132001235899999999999999856788543337766555667899999999997516997237314


Q ss_pred             CCCC-HHHHHHHHH--HCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             6888-789999833--229355279987710000001334608999987768874999999999649909995
Q 004629          168 IHFA-PSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG  237 (741)
Q Consensus       168 IHF~-~~~Al~a~~--~v~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIG  237 (741)
                      =-+. +.-+..+++  +++-+.|-+..+|.-.                      ....++..|+++|+.+=+|
T Consensus       148 E~~~t~~d~~~~i~~~a~d~v~iK~~k~GGi~----------------------~a~~~~~~A~~~Gi~~~~g  198 (251)
T d1kkoa1         148 EWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIH----------------------NIVDAVLYCNKHGMEAYQG  198 (251)
T ss_dssp             TTCCSHHHHHHHHHTTCCSEEEECGGGGSSTH----------------------HHHHHHHHHHHHTCEEEEC
T ss_pred             CEECCHHHHHHHHHHCCCCCEECCCCCCCCHH----------------------HHHHHHHHHHHCCCEEEEE
T ss_conf             60078999999998477662101534447889----------------------9999999999879939982


No 13 
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=94.56  E-value=0.14  Score=27.12  Aligned_cols=211  Identities=15%  Similarity=0.232  Sum_probs=131.0

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE----------CCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH-CC
Q ss_conf             898998999999998499999984----------3998889999999986003886654241568887899998332-29
Q 004629          115 KDVAGTVEEVMRIADQGADLVRIT----------VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD  183 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvt----------vp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~-v~  183 (741)
                      .|.++.++++.++.+.|++|+-+-          ++..++.+-+.-+.+.|++ ..++|+.-| -|.+.+|-+|+++ ++
T Consensus        35 ~~~~~a~~~a~~mi~~GAdiIDIGgeSTrPga~~vs~eeE~~Rl~pvi~~l~~-~~~~~iSID-T~~~eVa~~al~~Ga~  112 (282)
T d1ajza_          35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQ-RFEVWISVD-TSKPEVIRESAKVGAH  112 (282)
T ss_dssp             SHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHH-HCCCEEEEE-CCCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEE-ECCHHHHHHHHHCCCE
T ss_conf             79999999999999879979997782345666677688999989999999863-355327887-3473778999745965


Q ss_pred             CEE-ECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH--HHHCCCCCHHHHH
Q ss_conf             355-2799877100000013346089999877688749999999996499099951158876778--8650999168999
Q 004629          184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI--MSYYGDSPRGMVE  260 (741)
Q Consensus       184 KiR-INPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~i--l~~yg~tp~~mVe  260 (741)
                      -|- |. |.. +.                          +..+.+++++.++=+.-+.|-- +.+  ...|.+--.-+.+
T Consensus       113 iINDvs-g~~-~~--------------------------~~~~~va~~~~~~vlmh~~g~p-~~~~~~~~y~dv~~~v~~  163 (282)
T d1ajza_         113 IINDIR-SLS-EP--------------------------GALEAAAETGLPVCLMHMQGNP-KTMQEAPKYDDVFAEVNR  163 (282)
T ss_dssp             EECCTT-TTC-ST--------------------------THHHHHHHHTCCEEEECCSSCT-TCCSCCCCCSCHHHHHHH
T ss_pred             EEECHH-HCC-CC--------------------------HHHHHHHCCCCEEEEECCCCCC-CCCCCCCCCCCHHHHHHH
T ss_conf             984322-125-40--------------------------5677764369418974057996-544457753202345678


Q ss_pred             HHHHHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------CCCCCCCCHHHHHHHH
Q ss_conf             99999999997999--81699981399669999999999976107887563101246-------6899998024489999
Q 004629          261 SAFEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE-------AGEGEDGRMKSAIGIG  331 (741)
Q Consensus       261 SAle~~~i~e~~~F--~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTE-------AG~~~~G~IKSaiGiG  331 (741)
                      --.+.++.|.+.|.  .+|++--==-=-+..-+-+.++...-.-....||+-+|+.-       .|...+-|.-.+++..
T Consensus       164 ~~~~~~~~~~~~GI~~~~IilDPGiGFgK~~~~n~~ll~~l~~~~~~~~PiLvG~SRKsfi~~~~~~~~~~R~~~T~a~~  243 (282)
T d1ajza_         164 YFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACA  243 (282)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHHHTCCGGGCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHEECCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEEECCHHHHHHHHHCCCHHHHCHHHHHHH
T ss_conf             99888889987598576171678867588724417998610022025651588512888888874799565122689999


Q ss_pred             HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf             98542899635784578874552379999984
Q 004629          332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL  363 (741)
Q Consensus       332 ~LL~dGIGDTIRVSLT~dP~~EV~va~~Ll~~  363 (741)
                      ++....=-|-|||       ++|+..++.++.
T Consensus       244 ~~a~~~Ga~iiRV-------HdV~e~~~a~~v  268 (282)
T d1ajza_         244 VIAAMQGAHIIRV-------HDVKETVEAMRV  268 (282)
T ss_dssp             HHHHHTTCSEEEE-------SCHHHHHHHHHH
T ss_pred             HHHHHCCCCEEEE-------CCHHHHHHHHHH
T ss_conf             9999879999994-------798999999999


No 14 
>d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]}
Probab=93.88  E-value=0.19  Score=26.19  Aligned_cols=102  Identities=14%  Similarity=0.213  Sum_probs=79.0

Q ss_pred             CCCHHHHHHHHHHHHHCCCCE-EEEECCC-----HHHHHHHHHHHHHHCCCCCCCCEEECCCCC-HHHHHHHHH--HCCC
Q ss_conf             889899899999999849999-9984399-----888999999998600388665424156888-789999833--2293
Q 004629          114 TKDVAGTVEEVMRIADQGADL-VRITVQG-----KREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAE--CFDK  184 (741)
Q Consensus       114 T~Dv~atv~Qi~~L~~aGcei-VRvtvp~-----~~~A~al~~I~~~L~~~~~~iPLVADIHF~-~~~Al~a~~--~v~K  184 (741)
                      ..|.+..++-+.+|++++.++ +-+-=|=     ....+.+.++++++...++++|+++|=.+. +.-+..+++  ++|-
T Consensus        88 ~~~~~eai~~~~~L~~~~~~y~i~iEqP~~~~d~~~~~e~~a~lr~~~~~~g~~vpI~~DE~~~~~~d~~~~i~~~a~d~  167 (253)
T d1kcza1          88 DVDIKAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHM  167 (253)
T ss_dssp             TTCHHHHHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSE
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHCCCCE
T ss_conf             98999999999999974678884375598974076699999999888760488650531230267899999998387673


Q ss_pred             EEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             55279987710000001334608999987768874999999999649909995
Q 004629          185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG  237 (741)
Q Consensus       185 iRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIG  237 (741)
                      +.|-+.-+|.-.                      ....++..|+++|+++=||
T Consensus       168 v~iK~~k~GGi~----------------------~al~~~~~a~~~Gi~~~vg  198 (253)
T d1kcza1         168 VQIKTPDLGGVN----------------------NIADAIMYCKANGMGAYCG  198 (253)
T ss_dssp             EEECTGGGSSTH----------------------HHHHHHHHHHHTTCEEEEC
T ss_pred             EECCCCCCCCHH----------------------HHHHHHHHHHHCCCCEEEC
T ss_conf             530554558879----------------------9999999999859968980


No 15 
>d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.29  E-value=0.23  Score=25.53  Aligned_cols=66  Identities=24%  Similarity=0.400  Sum_probs=46.7

Q ss_pred             CEEECCCC---CCCCCCCHHHHHHHHHH----HHC--CCC-CCEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEC
Q ss_conf             33432888---86664358999999999----845--999-9289986114439998788860554388950675536
Q 004629          640 TEYVSCPS---CGRTLFDLQEISAEIRE----KTS--HLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVG  707 (741)
Q Consensus       640 te~ISCPs---CGRTlfDLq~~~~~Ik~----~t~--hLk-gvkIAVMGCIVNGPGEmadAD~GyvGg~pgki~Ly~g  707 (741)
                      .+++.||+   |-=-..|-..+++.+.+    +..  .+| .+||+|=||- |+=|+.--+|+|++|...+. ..+.+
T Consensus         7 ~~~~~~~g~~~C~~~~~ds~gl~~al~deL~~~~~~~~lP~k~KI~vSGCp-n~C~~~~i~DIGi~G~~~~~-~~~~g   82 (179)
T d3c7bb3           7 SNIVHTQGWIHCHTPAIDASGIVKAVMDELYEYFTDHKLPAMCRISLACCA-NMCGAVHASDIAIVGIHDGA-AIMVG   82 (179)
T ss_dssp             CCCBCCCHHHHCSSCSSCSHHHHHHHHHHHHHHHSSCCBSSCCCEEEESST-TCCSSGGGCSEEEEEECCEE-EEEEC
T ss_pred             CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC-CCCCCCCCCCEEEEEECCCC-CEECC
T ss_conf             410658986645786454118899999999998754112445336884368-76777443664258753688-44503


No 16 
>d1tx2a_ c.1.21.1 (A:) Dihydropteroate synthetase {Bacillus anthracis [TaxId: 1392]}
Probab=93.10  E-value=0.25  Score=25.34  Aligned_cols=207  Identities=15%  Similarity=0.264  Sum_probs=129.7

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCC----------HHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH-CC
Q ss_conf             898998999999998499999984399----------8889999999986003886654241568887899998332-29
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD  183 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp~----------~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~-v~  183 (741)
                      .|.++.++++..+.+.|+||+-+-..+          .++.+-+..+.+.+.+ ..++|+.-| -|+|.+|.+|+++ ++
T Consensus        39 ~~~~~a~~~a~~~i~~GAdiIDIGaeSTrPg~~~is~~eE~~rl~p~i~~~~~-~~~~~iSID-T~~~~Va~~al~~G~~  116 (273)
T d1tx2a_          39 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSK-EVKLPISID-TYKAEVAKQAIEAGAH  116 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHH-HSCSCEEEE-CSCHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECEECCCCCCCCCHHHHHHHHCHHHHHHHC-CCEEEEEHH-HHHHHHHHHHHHCCCE
T ss_conf             89999999999999879988995161335655556778887751525776523-542788547-7469999999974975


Q ss_pred             CEE-ECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHH
Q ss_conf             355-2799877100000013346089999877688749999999996499099951158876778865099916899999
Q 004629          184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA  262 (741)
Q Consensus       184 KiR-INPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg~tp~~mVeSA  262 (741)
                      =|- |+=|+ .|..                          +.+.+++++.++-+--+.+..      .|.+.-+.+...-
T Consensus       117 iINDvsg~~-~D~~--------------------------m~~~~~~~~~~~vlmH~~~~~------~~~~~~~~~~~~~  163 (273)
T d1tx2a_         117 IINDIWGAK-AEPK--------------------------IAEVAAHYDVPIILMHNRDNM------NYRNLMADMIADL  163 (273)
T ss_dssp             EEEETTTTS-SCTH--------------------------HHHHHHHHTCCEEEECCCSCC------CCSSHHHHHHHHH
T ss_pred             EEECCCCCC-CHHH--------------------------HHHHHHHHCCCCCCCCCCCCC------CCCCCCCHHHHHH
T ss_conf             896240022-1057--------------------------899987502354333212322------3211110135668


Q ss_pred             HHHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------CCCCCCCCHHHHHHHHHH
Q ss_conf             999999997999--81699981399669999999999976107887563101246-------689999802448999998
Q 004629          263 FEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE-------AGEGEDGRMKSAIGIGTL  333 (741)
Q Consensus       263 le~~~i~e~~~F--~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTE-------AG~~~~G~IKSaiGiG~L  333 (741)
                      .+.++.|++.|.  .+|++--=----+..-+-+.++..--.-....+|+=+|+.-       .|...+.|.-.+.++..+
T Consensus       164 ~~~i~~~~~~GI~~~~IiiDPGiGFgK~~~~n~~ll~~i~~l~~~g~PilvG~SRKsfig~~~~~~~~eRl~~Tla~~~~  243 (273)
T d1tx2a_         164 YDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCL  243 (273)
T ss_dssp             HHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             99999999869984307557667866217787888753130135898289970287899987289978845799999999


Q ss_pred             HHCCCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf             542899635784578874552379999984
Q 004629          334 LQDGLGDTIRVSLTEPPEKEIDPCRRLANL  363 (741)
Q Consensus       334 L~dGIGDTIRVSLT~dP~~EV~va~~Ll~~  363 (741)
                      ....=.+-|||       ++|+-.++.++.
T Consensus       244 a~~~Ga~ilRv-------HdV~e~~~al~v  266 (273)
T d1tx2a_         244 GIEKGCEFVRV-------HDVKEMSRMAKM  266 (273)
T ss_dssp             HHHTTCSEEEE-------SCHHHHHHHHHH
T ss_pred             HHHCCCCEEEE-------CCHHHHHHHHHH
T ss_conf             99879989994-------998999999999


No 17 
>d1f6ya_ c.1.21.2 (A:) Methyltetrahydrofolate: corrinoid/iron-sulfur protein methyltransferase MetR {Moorella thermoacetica [TaxId: 1525]}
Probab=92.68  E-value=0.28  Score=24.95  Aligned_cols=168  Identities=13%  Similarity=0.032  Sum_probs=110.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE--CCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCEE-ECCCC
Q ss_conf             898998999999998499999984--399888999999998600388665424156888789999833229355-27998
Q 004629          115 KDVAGTVEEVMRIADQGADLVRIT--VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR-VNPGN  191 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvt--vp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~v~KiR-INPGN  191 (741)
                      .|.++.+++.+++.++|++|+=+-  ++..++.+.+..+.+.+.+. +++|+.-|- |++.++-+|++...... ||-=+
T Consensus        22 ~d~~~~~~~A~~m~~~GAdiIDIg~g~~~~~e~e~~~~vi~~l~~~-~~vpiSIDT-~~~~v~~aal~~~~Ga~iINdIs   99 (262)
T d1f6ya_          22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEV-SNLTLCLDS-TNIKAIEAGLKKCKNRAMINSTN   99 (262)
T ss_dssp             TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTT-CCSEEEEEC-SCHHHHHHHHHHCSSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH-HCCCCCCCC-CCCHHHHHHHHHHCCCCEEECHH
T ss_conf             8999999999999987999899599988879999999999988886-268853568-86278999998604540434141


Q ss_pred             CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             77100000013346089999877688749999999996499099951158876778865099916899999999999997
Q 004629          192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK  271 (741)
Q Consensus       192 i~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg~tp~~mVeSAle~~~i~e~  271 (741)
                      -.. .                      ........+++++.++=.-.+.+.       .+.++++-..+-+.+.++.|++
T Consensus       100 g~~-~----------------------~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  149 (262)
T d1f6ya_         100 AER-E----------------------KVEKLFPLAVEHGAALIGLTMNKT-------GIPKDSDTRLAFAMELVAAADE  149 (262)
T ss_dssp             SCH-H----------------------HHHHHHHHHHHTTCEEEEESCCSS-------CSCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCC-C----------------------HHHHHHHHHHCCCCEEEEEECCCC-------CCCCCHHHHHHHHHHHHHHHHH
T ss_conf             020-0----------------------589998997557961898754776-------6555799999999999999997


Q ss_pred             CCC--CCEEEEE-----ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             999--8169998-----1399669999999999976107887563101246
Q 004629          272 LDF--HNFLFSM-----KASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE  315 (741)
Q Consensus       272 ~~F--~diviS~-----KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTE  315 (741)
                      .|+  ++|++--     |.. -....+...+|..--.-....+|+-+|+--
T Consensus       150 ~Gi~~~~Ii~DPgi~~~~~~-~~~~~~~le~l~~l~~~~~~g~~~l~G~Sn  199 (262)
T d1f6ya_         150 FGLPMEDLYIDPLILPANVA-QDHAPEVLKTLQQIKMLADPAPKTVLGLSN  199 (262)
T ss_dssp             HTCCGGGEEEECCCCCTTTC-TTHHHHHHHHHHHHHTCCSSCCEEEEEGGG
T ss_pred             CCCCHHHHHCCCEEEECCCC-CHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             59998980125202210343-167899999999999998523333650102


No 18 
>d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=92.63  E-value=0.2  Score=25.99  Aligned_cols=105  Identities=14%  Similarity=0.097  Sum_probs=57.2

Q ss_pred             CCCHHHHHHHH-HHHHHCCCCEEEEECC--C-HHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHHHHCCCEEE
Q ss_conf             88989989999-9999849999998439--9-888999999998600388665424156888--7899998332293552
Q 004629          114 TKDVAGTVEEV-MRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDKIRV  187 (741)
Q Consensus       114 T~Dv~atv~Qi-~~L~~aGceiVRvtvp--~-~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~~~v~KiRI  187 (741)
                      ..|.+.-++|. ..+.+.|-.-+.+-+-  + .++.+.+..|++.+   |-++.|..|.+-.  +.-|+..++.+++.. 
T Consensus        14 ~~~~~~~~~~~~~~~~~~Gf~~~KiKvG~~~~~~D~~~v~~ir~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~-   89 (244)
T d2chra1          14 SGDTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSL---GSKAYLRVDVNQAWDEQVASVYIPELEALG-   89 (244)
T ss_dssp             SSCHHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHT---TTTSEEEEECTTCCCTHHHHHHHHHHHTTT-
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---CCCCEEEEECCCCCCHHHHHHHHHHHHHHH-
T ss_conf             8993999999999999579997999839999899999999999846---788669991898850577888898875406-


Q ss_pred             CCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             799877100000013-34608999987768874999999999649909995115887
Q 004629          188 NPGNFADRRAQFEQL-EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       188 NPGNi~~~~k~f~~~-~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                          +.-    +|+- .+.             .+..+.+..+..++||=.|-+.-++
T Consensus        90 ----i~~----iEeP~~~~-------------d~~~~~~l~~~~~ipia~~E~~~~~  125 (244)
T d2chra1          90 ----VEL----IEQPVGRE-------------NTQALRRLSDNNRVAIMADESLSTL  125 (244)
T ss_dssp             ----CCE----EECCSCSS-------------CHHHHHHHHHHCSSEEEESSSCCSH
T ss_pred             ----HHH----HHHHHHHC-------------CCHHHHHHCCCEEEEEEECCCCCCC
T ss_conf             ----888----72012002-------------4113344142203566403444321


No 19 
>d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]}
Probab=86.70  E-value=0.84  Score=21.72  Aligned_cols=96  Identities=18%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             EEECCC--CCCCCCCCHHHHHHHHHHHHC----------------------------CCC-CCEEEEEEEEECCCCCCCC
Q ss_conf             343288--886664358999999999845----------------------------999-9289986114439998788
Q 004629          641 EYVSCP--SCGRTLFDLQEISAEIREKTS----------------------------HLP-GVSIAIMGCIVNGPGEMAD  689 (741)
Q Consensus       641 e~ISCP--sCGRTlfDLq~~~~~Ik~~t~----------------------------hLk-gvkIAVMGCIVNGPGEmad  689 (741)
                      +.++||  .+..-.||.+..+++|.+.+.                            .|| -.||||=||--|- .+.--
T Consensus         6 NV~~~~~~~~~~~~~d~~~~A~~i~~~~~~~~~~y~ei~~~~~~~~~~~~~p~Y~~~~LPRKFKIavsgc~~nc-~~~~~   84 (197)
T d1aopa3           6 NVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQND-IDLHA   84 (197)
T ss_dssp             CCEECSSCSSTTHHHHHHHHHHHHHHHTCC--------------------------CCCSSCBCEEEECTTBCT-TCGGG
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC-EEEEE
T ss_conf             54278985675257999999999999855564069999853661125666843234568844489886486230-21231


Q ss_pred             CCEEEECCC-CC---EEEEEECCEEE---------------EECCCHHHHHH---HHHHHHHHCCCCCCC
Q ss_conf             860554388-95---06755365545---------------53588237999---999999960666899
Q 004629          690 ADFGYVGGA-PG---KIDLYVGKTVV---------------KRGIAMEQATD---ALIQLIKDHGRWAEP  737 (741)
Q Consensus       690 AD~GyvGg~-pg---ki~Ly~gke~V---------------~~~Ipeeeavd---~Li~lIk~~g~w~dp  737 (741)
                      -|+|+++.. .|   ..++|.|+.+-               ---++.+++++   ++++.-+++|+..+-
T Consensus        85 nDiG~ia~~~~g~~~Gf~V~vGGglg~~~~~~~~~~~~~~~~~~v~~e~vl~v~~aI~~v~rd~G~R~nR  154 (197)
T d1aopa3          85 NDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDR  154 (197)
T ss_dssp             SSEEEEEEEETTEEEEEEEEECCBCCCCTTCTTCCCBCCEEEEEEEGGGHHHHHHHHHHHHHHHSCSSCS
T ss_pred             CCEEEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHC
T ss_conf             4148999981896058999970236315788886430013216589999999999999999986787443


No 20 
>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]}
Probab=85.54  E-value=0.95  Score=21.33  Aligned_cols=19  Identities=26%  Similarity=0.380  Sum_probs=12.5

Q ss_pred             CCCCCEEEEECCCCCCCCCH
Q ss_conf             28996357845788745523
Q 004629          336 DGLGDTIRVSLTEPPEKEID  355 (741)
Q Consensus       336 dGIGDTIRVSLT~dP~~EV~  355 (741)
                      +|+ -.|=|||++...+|+.
T Consensus        13 ~g~-pkIcv~l~~~~~~~~~   31 (252)
T d1gqna_          13 EGM-PKIIVSLMGRDINSVK   31 (252)
T ss_dssp             SSS-CEEEEEECCSSHHHHH
T ss_pred             CCC-CEEEEEECCCCHHHHH
T ss_conf             999-8799996789999999


No 21 
>d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]}
Probab=82.49  E-value=1.3  Score=20.48  Aligned_cols=106  Identities=14%  Similarity=0.152  Sum_probs=58.4

Q ss_pred             CCHHHHHHHHHH-HHHCCCCEEEEECC--C-HHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHHHHCCCEEEC
Q ss_conf             898998999999-99849999998439--9-888999999998600388665424156888--78999983322935527
Q 004629          115 KDVAGTVEEVMR-IADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDKIRVN  188 (741)
Q Consensus       115 ~Dv~atv~Qi~~-L~~aGceiVRvtvp--~-~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~~~v~KiRIN  188 (741)
                      .|.+..++|..+ +.+.|-.-+.+-+-  + .++.+.+..|++.+   |-.+.|..|-|..  +.-|+..++.+++.   
T Consensus        15 ~~~~~~~~e~~~~~~~~G~~~~KiKvG~~~~~~Di~~v~~ir~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~~---   88 (243)
T d1nu5a1          15 GDTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDVNQGWDEQTASIWIPRLEEA---   88 (243)
T ss_dssp             SCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEECTTCCCHHHHHHHHHHHHHH---
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH---CCCCCEEEECCCCCCCHHHHHHHHHHCCH---
T ss_conf             991999999999999679997999929999799999999999984---86666588778876011588888874300---


Q ss_pred             CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             99877100000013346089999877688749999999996499099951158876
Q 004629          189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS  244 (741)
Q Consensus       189 PGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~  244 (741)
                        |+.-    ||+-.-. +           .+..+-+.++..++||=.|-+.-|+.
T Consensus        89 --~~~~----iEeP~~~-~-----------~~~~~~~l~~~~~ipIa~gE~~~~~~  126 (243)
T d1nu5a1          89 --GVEL----VEQPVPR-A-----------NFGALRRLTEQNGVAILADESLSSLS  126 (243)
T ss_dssp             --TCCE----EECCSCT-T-----------CHHHHHHHHHHCSSEEEESTTCCSHH
T ss_pred             --HHHH----HHHHHHH-C-----------CCCCCCCCHHCCCCCCCCCCCCCCCH
T ss_conf             --4665----5334321-0-----------11221100000011101223332100


No 22 
>d2g0wa1 c.1.15.4 (A:10-284) Hypothetical protein Lmo2234 {Listeria monocytogenes [TaxId: 1639]}
Probab=80.69  E-value=1.5  Score=20.05  Aligned_cols=61  Identities=18%  Similarity=0.205  Sum_probs=42.4

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHH----HHHHHHHHHHCCCCCCCCEE
Q ss_conf             96488750589988989989999999984999999843998889----99999998600388665424
Q 004629          102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA----DACFEIKNSLVQKNYNIPLV  165 (741)
Q Consensus       102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A----~al~~I~~~L~~~~~~iPLV  165 (741)
                      .||.+++-|-....+.+   +++...+++|.+-|=+...+....    ..++.+++.|.+.|..+..+
T Consensus         2 ~~i~i~~~tl~~~~~le---e~l~~aa~~Gfd~iEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~   66 (275)
T d2g0wa1           2 CPITISSYTLGTEVSFP---KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEV   66 (275)
T ss_dssp             CCEEECGGGGTTTSCHH---HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEHHHHCCCCCHH---HHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             88486675727999999---999999993999999704555433457677999999999749936998


No 23 
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=80.30  E-value=1.5  Score=19.97  Aligned_cols=153  Identities=12%  Similarity=0.127  Sum_probs=94.9

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHH----HHHHHHHHHHHHCCCCCCCC-EEECCCCCH------
Q ss_conf             4887505899889899899999999849999998439988----89999999986003886654-241568887------
Q 004629          104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR----EADACFEIKNSLVQKNYNIP-LVADIHFAP------  172 (741)
Q Consensus       104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~~~----~A~al~~I~~~L~~~~~~iP-LVADIHF~~------  172 (741)
                      +.++++|+-...+.+..+   ..++++|.+-|-+...+..    ....+.++++.|.+.|..+. +-+...|+.      
T Consensus         3 ~~~~~~~~~~~~~l~~~l---~~a~~~Gf~~IEl~~~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~~~~~~~   79 (278)
T d1i60a_           3 LCFNEATTLENSNLKLDL---ELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH   79 (278)
T ss_dssp             EEEEGGGGTTTCCHHHHH---HHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH
T ss_pred             EEEEHHHHCCCCCHHHHH---HHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH
T ss_conf             897588857999999999---99999794989957766661124854299999999986991899756777788998999


Q ss_pred             -------HHHHHHHH--HCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CCCC
Q ss_conf             -------89999833--2293552799877100000013346089999877688749999999996499099951-1588
Q 004629          173 -------SVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS  242 (741)
Q Consensus       173 -------~~Al~a~~--~v~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGv-N~GS  242 (741)
                             +.+++.+.  .+..|++.||+..+..        +++   +..+++.+.+..+.+.|+++|+.+-|-. ||. 
T Consensus        80 ~~~~~~~~~~i~~a~~lG~~~i~~~~~~~~~~~--------~~~---~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~-  147 (278)
T d1i60a_          80 NEIITEFKGMMETCKTLGVKYVVAVPLVTEQKI--------VKE---EIKKSSVDVLTELSDIAEPYGVKIALEFVGHP-  147 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCC--------CHH---HHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT-
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--------CHH---HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC-
T ss_conf             999999999999999749984556666688887--------779---99999999999999999973982464312222-


Q ss_pred             CCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             767788650999168999999999999979998169998139
Q 004629          243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKAS  284 (741)
Q Consensus       243 L~~~il~~yg~tp~~mVeSAle~~~i~e~~~F~diviS~KaS  284 (741)
                                   ..++.+..+..+++++.+-.++-+.+-.+
T Consensus       148 -------------~~~~~~~~~~~~ll~~v~~~~vg~~~D~~  176 (278)
T d1i60a_         148 -------------QCTVNTFEQAYEIVNTVNRDNVGLVLDSF  176 (278)
T ss_dssp             -------------TBSSCSHHHHHHHHHHHCCTTEEEEEEHH
T ss_pred             -------------CCCCCCHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf             -------------32469999999999875033431345620


No 24 
>d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]}
Probab=78.41  E-value=1.7  Score=19.58  Aligned_cols=69  Identities=14%  Similarity=0.290  Sum_probs=43.4

Q ss_pred             CCCCHHHHHHHHHHHHH-CCCCEEEEEC--CC-HHHHHHHHHHHHHHCCCCCCCCEEECCCC--CHHHHHHHHHHCCC
Q ss_conf             98898998999999998-4999999843--99-88899999999860038866542415688--87899998332293
Q 004629          113 DTKDVAGTVEEVMRIAD-QGADLVRITV--QG-KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK  184 (741)
Q Consensus       113 ~T~Dv~atv~Qi~~L~~-aGceiVRvtv--p~-~~~A~al~~I~~~L~~~~~~iPLVADIHF--~~~~Al~a~~~v~K  184 (741)
                      ...|.+..+++..+..+ -|-..+.+-+  ++ .++.+.+..|++.+   |-.+.|..|.+-  ++.-|+..++.+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~G~~~~KiKvG~~~~~~Di~~i~~ir~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~   87 (242)
T d1muca1          13 ASGDTARDIAEARHMLEIRRHRVFKLKIGANPVEQDLKHVVTIKREL---GDSASVRVDVNQYWDESQAIRACQVLGD   87 (242)
T ss_dssp             CCSCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCBCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH---CCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             17991999999999999789977999979999799999999999985---8998798746978867888998888643


No 25 
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=71.55  E-value=2.5  Score=18.42  Aligned_cols=58  Identities=12%  Similarity=0.136  Sum_probs=28.3

Q ss_pred             CCEEEEECCCCCCCCHHHHH-HHHHHHHHCCCCEEEEEC---CCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             96488750589988989989-999999984999999843---99888999999998600388665
Q 004629          102 HPIRVQTMTTNDTKDVAGTV-EEVMRIADQGADLVRITV---QGKREADACFEIKNSLVQKNYNI  162 (741)
Q Consensus       102 ~PI~VQSMt~t~T~Dv~atv-~Qi~~L~~aGceiVRvtv---p~~~~A~al~~I~~~L~~~~~~i  162 (741)
                      |||.||.-+-..-.--+... +-+..++++|++=|-+..   ++..+   +.++++.+.+.|..+
T Consensus         2 ~p~~i~l~~fg~~~v~~~~~~~~l~~~a~~G~dgIEi~~~~~~~~~~---~~~l~~~~~~~GL~i   63 (250)
T d1yx1a1           2 HPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREELFAGPPD---TEALTAAIQLQGLEC   63 (250)
T ss_dssp             CCEEEEGGGGCHHHHHHHCGGGGHHHHHHHTCSEEEEEGGGCSSCCC---HHHHHHHHHHTTCEE
T ss_pred             CCEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCH---HHHHHHHHHHCCCEE
T ss_conf             78797840246530002689999999998499989982324788111---999999999769989


No 26 
>d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]}
Probab=67.71  E-value=3  Score=17.88  Aligned_cols=80  Identities=13%  Similarity=0.157  Sum_probs=58.5

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHH
Q ss_conf             9648875058998898998999999998499999984399888999999998600388665424156888--78999983
Q 004629          102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVA  179 (741)
Q Consensus       102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~  179 (741)
                      .|-.|.|=.+......+...+++.++.+.|..-+.+-+-...+.+.+..|++.+-    ++.|..|.|..  +.-|+..+
T Consensus         2 ~p~~~~~~~tv~~~tpe~~~~~a~~~~~~G~~~~KiKvg~~~d~~~i~~ir~~~~----d~~l~vDaN~~~s~~~A~~~~   77 (208)
T d1jpdx1           2 LPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVP----DATLIVDANESWRAEGLAARC   77 (208)
T ss_dssp             CCSEEEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHCT----TSEEEEECTTCCCSTTHHHHH
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC----CCEEEEECCCCCCHHHHHHHH
T ss_conf             9984465567478999999999999997799989997799837999999997453----658998154320016789999


Q ss_pred             HHCCCE
Q ss_conf             322935
Q 004629          180 ECFDKI  185 (741)
Q Consensus       180 ~~v~Ki  185 (741)
                      +.+++.
T Consensus        78 ~~l~~~   83 (208)
T d1jpdx1          78 QLLADL   83 (208)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
T ss_conf             988742


No 27 
>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}
Probab=62.73  E-value=3.7  Score=17.25  Aligned_cols=206  Identities=16%  Similarity=0.196  Sum_probs=118.7

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEE----------CCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH-C
Q ss_conf             8898998999999998499999984----------3998889999999986003886654241568887899998332-2
Q 004629          114 TKDVAGTVEEVMRIADQGADLVRIT----------VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F  182 (741)
Q Consensus       114 T~Dv~atv~Qi~~L~~aGceiVRvt----------vp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~-v  182 (741)
                      -.|.+..++++.++.+.|++|+-+-          ++..++.+-+..+.+.|.+  ..+++.-| -|+|.+|-+|+++ +
T Consensus        22 ~~~~~~a~~~~~~m~~~GAdiIDIGaeSTrPga~~is~~eE~~Rl~pvi~~l~~--~~~~iSID-T~~~eVa~~al~~Ga   98 (264)
T d1ad1a_          22 FNNVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVG--FDVKISVD-TFRSEVAEACLKLGV   98 (264)
T ss_dssp             TCSHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEE-CSCHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCCCCCHH-HHHHHHHHHHHHCCC
T ss_conf             889999999999999879989997886179999867989999764357665304--57621225-555889999986498


Q ss_pred             CCEE-ECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHH
Q ss_conf             9355-279987710000001334608999987768874999999999649909995115887677886509991689999
Q 004629          183 DKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES  261 (741)
Q Consensus       183 ~KiR-INPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg~tp~~mVeS  261 (741)
                      +-|- | -|.+.|.+                          +.+.+++++.++=+--+.|--      ++.+.-.-+...
T Consensus        99 ~iINDV-s~g~~d~~--------------------------~~~~va~~~~~~ilmH~~~~~------~~~~~~~~v~~~  145 (264)
T d1ad1a_          99 DIINDQ-WAGLYDHR--------------------------MFQVVAKYDAEIVLMHNGNGN------RDEPVVEEMLTS  145 (264)
T ss_dssp             CEEEET-TTTSSCTH--------------------------HHHHHHHTTCEEEEECCCCTT------CCSCHHHHHHHH
T ss_pred             CEEECC-CCCCCCCC--------------------------HHHHHHHCCCCEEEEEECCCC------CCCCCCHHHHHH
T ss_conf             675052-32344511--------------------------788986237651563220465------567630024567


Q ss_pred             HHHHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------CC--CCCCCCHHHHHHH
Q ss_conf             9999999997999--81699981399669999999999976107887563101246-------68--9999802448999
Q 004629          262 AFEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE-------AG--EGEDGRMKSAIGI  330 (741)
Q Consensus       262 Ale~~~i~e~~~F--~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTE-------AG--~~~~G~IKSaiGi  330 (741)
                      -.+.++.|.+.|.  .+|++--==-=-+..-+-+.+|..--.-....||+=+|+--       .|  .....|.-.+++.
T Consensus       146 ~~~~~~~~~~~Gi~~~~IilDPGiGFgKt~~~n~~ll~~l~~~~~~g~PiLiG~SRKsfig~l~g~~~~~~~r~~~t~a~  225 (264)
T d1ad1a_         146 LLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAAT  225 (264)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHCHHHHHTTCSCBEECCTTSHHHHTTSSSCCCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             88888888864045235886158673422110799998877763269964653109999998757999868741899999


Q ss_pred             HHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             99854289963578457887455237999998
Q 004629          331 GTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN  362 (741)
Q Consensus       331 G~LL~dGIGDTIRVSLT~dP~~EV~va~~Ll~  362 (741)
                      ..++...=.+-|||       ++|+..++.++
T Consensus       226 ~~~a~~~Ga~iiRv-------HDV~e~~~~~~  250 (264)
T d1ad1a_         226 TAYGIMKGVRAVRV-------HNVELNAKLAK  250 (264)
T ss_dssp             HHHHHHHTCCEEEE-------SCHHHHHHHHH
T ss_pred             HHHHHHCCCCEEEE-------CCHHHHHHHHH
T ss_conf             99999879999994-------89899999999


No 28 
>d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]}
Probab=57.18  E-value=4.6  Score=16.62  Aligned_cols=104  Identities=11%  Similarity=0.148  Sum_probs=68.5

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCC--CCHHHHHHHHHHCCCEEECCCCC
Q ss_conf             8989989999999984999999843998889999999986003886654241568--88789999833229355279987
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRVNPGNF  192 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIH--F~~~~Al~a~~~v~KiRINPGNi  192 (741)
                      .+.+..++|+....+.|..-+.+-+-..++.+.+..|++.+   |..+.|..|-|  |+..-|+..    .|  +.+-|+
T Consensus        15 ~~~~~~~~~~~~~~~~Gf~~~Kikvg~~~Di~~i~~ir~~~---g~~~~l~vDaN~~~~~~~a~~~----~~--l~~~~~   85 (242)
T d1sjda1          15 DTIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPVRAVRERF---GDDVLLQVDANTAYTLGDAPQL----AR--LDPFGL   85 (242)
T ss_dssp             SCHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHHHHHHHHH---CTTSEEEEECTTCCCGGGHHHH----HT--TGGGCC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH---CCCEEEEECCCCCCCHHHHHHH----HH--HHHHHH
T ss_conf             99999999999999869998999779526899999999870---8981374223212220256677----66--401216


Q ss_pred             CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             710000001334608999987768874999999999649909995115887
Q 004629          193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       193 ~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                      .-    ||+-.-.+            .+..+-+..+..++||=.|=+.-++
T Consensus        86 ~~----iEeP~~~~------------d~~~~~~l~~~~~~pia~gE~~~~~  120 (242)
T d1sjda1          86 LL----IEQPLEEE------------DVLGHAELARRIQTPICLDESIVSA  120 (242)
T ss_dssp             SE----EECCSCTT------------CHHHHHHHHTTCSSCEEESTTCCSH
T ss_pred             HH----HHHHHHHH------------HHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             88----87666555------------4799999976057553235234562


No 29 
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]}
Probab=56.35  E-value=4.2  Score=16.88  Aligned_cols=27  Identities=22%  Similarity=0.383  Sum_probs=11.3

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             6488750589988989989999999984999
Q 004629          103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGAD  133 (741)
Q Consensus       103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGce  133 (741)
                      |+.+|.+.    .|.+..++|..++...+-.
T Consensus        55 ~is~ev~~----~~~~~m~~~a~~l~~~~~n   81 (218)
T d1vpxa_          55 PVSAEVVS----LDYEGMVREARELAQISEY   81 (218)
T ss_dssp             CEEEECSC----CSHHHHHHHHHHHHTTCTT
T ss_pred             CCHHHHCC----CCHHHHHHHHHHHHCCCCC
T ss_conf             41021134----7278888999998513554


No 30 
>d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.76  E-value=5  Score=16.36  Aligned_cols=170  Identities=12%  Similarity=0.102  Sum_probs=106.0

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECC----------CHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH-C
Q ss_conf             889899899999999849999998439----------98889999999986003886654241568887899998332-2
Q 004629          114 TKDVAGTVEEVMRIADQGADLVRITVQ----------GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F  182 (741)
Q Consensus       114 T~Dv~atv~Qi~~L~~aGceiVRvtvp----------~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~-v  182 (741)
                      ..+.++.++++.++.+.|++|+-+-..          ..++..-+..+.+.+.+.+  +++.-| -|.+.+|-+|+++ +
T Consensus        21 ~~~~~~a~~~a~~~~~~GAdiIDIGgeSTrPga~~is~~eE~~Rl~p~i~~~~~~~--~~iSID-T~~~~Va~~al~~Ga   97 (270)
T d1eyea_          21 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQG--ITVSID-TMRADVARAALQNGA   97 (270)
T ss_dssp             CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTT--CCEEEE-CSCHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECHHHCCCCCCEEEEECCCC--EEECHH-HHHHHHHHHHHHCCC
T ss_conf             88999999999999988998999798237998976203311331231355503432--254067-646999999986698


Q ss_pred             CCEE-ECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH---HCCCCCHHH
Q ss_conf             9355-279987710000001334608999987768874999999999649909995115887677886---509991689
Q 004629          183 DKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS---YYGDSPRGM  258 (741)
Q Consensus       183 ~KiR-INPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~---~yg~tp~~m  258 (741)
                      +-|- |.=|+. |..                          +.+.+++++.++-+--+.|--. +...   .|.+-...+
T Consensus        98 ~iINDvsg~~~-d~~--------------------------m~~~~a~~~~~~vlmh~~g~~~-~~~~~~~~~~~~~~~i  149 (270)
T d1eyea_          98 QMVNDVSGGRA-DPA--------------------------MGPLLAEADVPWVLMHWRAVSA-DTPHVPVRYGNVVAEV  149 (270)
T ss_dssp             CEEEETTTTSS-CTT--------------------------HHHHHHHHTCCEEEECCCCSCT-TCTTSCCCCSSHHHHH
T ss_pred             EEEEECCCCCC-CHH--------------------------HHHHHHHCCCCEEEEECCCCCC-CCCCCCCCCCCHHHHH
T ss_conf             29993643544-226--------------------------7766531133425641146654-4323343334005566


Q ss_pred             HHHHHHHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             9999999999997999--8169998139966999999999997610788756310124
Q 004629          259 VESAFEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT  314 (741)
Q Consensus       259 VeSAle~~~i~e~~~F--~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVT  314 (741)
                      ..--.+.++.|...|+  ++|++--=--=-+..-+-+.+|..--.-..+.||+=+|+.
T Consensus       150 ~~~~~~~~~~~~~~Gi~~~~IilDPGiGFgKt~~~n~~lL~~l~~~~~~g~PiLvG~S  207 (270)
T d1eyea_         150 RADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGAS  207 (270)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCT
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEH
T ss_conf             6678889999875032202799714435575431089999888763268986697501


No 31 
>d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=50.47  E-value=5.9  Score=15.90  Aligned_cols=105  Identities=12%  Similarity=0.071  Sum_probs=63.1

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCC---------HHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHHHHCC
Q ss_conf             898998999999998499999984399---------888999999998600388665424156888--789999833229
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFD  183 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp~---------~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~~~v~  183 (741)
                      ...+...+++..+.+.|..-+.+-+-.         .++.+.+..|++.+   |.++.|..|-|-.  ..-|+..++.++
T Consensus        22 ~tpe~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~~d~~~v~avR~~~---G~~~~l~vDaN~~~~~~~A~~~~~~l~   98 (255)
T d1rvka1          22 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLMIDAFHWYSRTDALALGRGLE   98 (255)
T ss_dssp             SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCHHHHHHHHCC
T ss_conf             99999999999999769998998178786666648999999999999870---776441024442332101344431013


Q ss_pred             CEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             355279987710000001334608999987768874999999999649909995115887
Q 004629          184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       184 KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                           +-|+.-    ||+-.-.+            ....+-+.++...+||=.|-+..|.
T Consensus        99 -----~~~l~~----iEeP~~~~------------d~~~~~~l~~~~~~pI~~~E~~~~~  137 (255)
T d1rvka1          99 -----KLGFDW----IEEPMDEQ------------SLSSYKWLSDNLDIPVVGPESAAGK  137 (255)
T ss_dssp             -----TTTCSE----EECCSCTT------------CHHHHHHHHHHCSSCEEECSSCSSH
T ss_pred             -----CCHHHH----HCCCCCCC------------CHHHHHHHHHHCCCCEEEHHHCCCC
T ss_conf             -----320455----42885310------------2789999988503100001210340


No 32 
>d2gl5a1 c.1.11.2 (A:123-400) Putative dehydratase protein STM2273 {Salmonella typhimurium [TaxId: 90371]}
Probab=50.32  E-value=5.9  Score=15.89  Aligned_cols=150  Identities=14%  Similarity=0.138  Sum_probs=68.4

Q ss_pred             HHHHHHHHH-CCCEEECCCCCCCHHHHC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             899998332-293552799877100000--------01334608999987768874999999999649909995115887
Q 004629          173 SVALRVAEC-FDKIRVNPGNFADRRAQF--------EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       173 ~~Al~a~~~-v~KiRINPGNi~~~~k~f--------~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                      +.|..+.+. ...+.+.||.+.......        .......+......++|+.     |+.+--.++.|++-.|.+ .
T Consensus        32 ~~a~~~~~~Gf~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~v~a-----iRe~vG~~~~l~vDan~~-~  105 (278)
T d2gl5a1          32 EAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAA-----MREAMGDDADIIVEIHSL-L  105 (278)
T ss_dssp             HHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHH-----HHHHHCSSSEEEEECTTC-S
T ss_pred             HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHCCCCCEEECCCCC-C
T ss_conf             9999999759998998166677665421124545443444327789999999999-----998706654121012446-5


Q ss_pred             CHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             67788650999168999999999999979998169998139966999999999997610788756310124668999980
Q 004629          244 SDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR  323 (741)
Q Consensus       244 ~~~il~~yg~tp~~mVeSAle~~~i~e~~~F~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTEAG~~~~G~  323 (741)
                      +              ++.|++.++.+++.++.=+==-+    ...-++.|+.|.++     ...|+-.|=         .
T Consensus       106 ~--------------~~~Ai~~~~~L~~~~l~wiEePi----~~~d~~~~~~L~~~-----~~ipIa~gE---------~  153 (278)
T d2gl5a1         106 G--------------TNSAIQFAKAIEKYRIFLYEEPI----HPLNSDNMQKVSRS-----TTIPIATGE---------R  153 (278)
T ss_dssp             C--------------HHHHHHHHHHHGGGCEEEEECSS----CSSCHHHHHHHHHH-----CSSCEEECT---------T
T ss_pred             C--------------CHHHHHHHHHHCCCCCCEECCCC----CCCCHHHHHHHCCC-----CCCCEECCC---------C
T ss_conf             5--------------11567788775134321003663----22353555430103-----245332255---------5


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             244899999854289963578457887455237999998
Q 004629          324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN  362 (741)
Q Consensus       324 IKSaiGiG~LL~dGIGDTIRVSLT~dP~~EV~va~~Ll~  362 (741)
                      +-+.-.+-.|+..|--|-+++-++--  -=|--++++.+
T Consensus       154 ~~~~~~~~~~i~~~a~di~~~d~~~~--GGit~~~kia~  190 (278)
T d2gl5a1         154 SYTRWGYRELLEKQSIAVAQPDLCLC--GGITEGKKICD  190 (278)
T ss_dssp             CCTTHHHHHHHHTTCCSEECCCTTTT--THHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCCCEEEEECCCCC--CCHHHHHHHHH
T ss_conf             47857876542035412675312100--56366777654


No 33 
>d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=48.03  E-value=6.4  Score=15.65  Aligned_cols=65  Identities=15%  Similarity=0.188  Sum_probs=40.5

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECC--C-HHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHHHH
Q ss_conf             889899899999999849999998439--9-888999999998600388665424156888--7899998332
Q 004629          114 TKDVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAEC  181 (741)
Q Consensus       114 T~Dv~atv~Qi~~L~~aGceiVRvtvp--~-~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~~~  181 (741)
                      ..+.+..++|+.++.+.|..-+++-+.  + .++.+.+..|++.+   |.++.|..|.|-.  ..-|+..++.
T Consensus        13 ~~~pe~~~~~a~~~~~~G~~~~Kikig~~~~~~d~~~i~~ir~~~---g~~~~i~vD~N~~~~~~~a~~~~~~   82 (234)
T d1jpma1          13 VNSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDANQGWRPKEAVTAIRK   82 (234)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCSCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---CCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             899999999999999779998999899999899999999999873---8324446504333203778899998


No 34 
>d1vlia2 c.1.10.6 (A:2-296) Spore coat polysaccharide biosynthesis protein SpsE, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=48.00  E-value=6.4  Score=15.65  Aligned_cols=54  Identities=17%  Similarity=0.303  Sum_probs=45.9

Q ss_pred             EEEECEEECCCCCCE-EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf             699700102899964-887505899889899899999999849999998439988
Q 004629           90 TVMVGNVAIGSEHPI-RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR  143 (741)
Q Consensus        90 ~V~VG~v~IGG~~PI-~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~~~  143 (741)
                      .-+||+..||+++|+ .|--..+..--|.+-..+-|....++|||.|.+-.-..+
T Consensus         2 ~~~i~~~~ig~~~~~~IIAEig~nH~G~~~~ak~lI~~A~~sGAdaVKFQ~~~~~   56 (295)
T d1vlia2           2 AFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQAD   56 (295)
T ss_dssp             EEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGG
T ss_pred             CEEECCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCH
T ss_conf             4588998948999708999845775755999999999999819898998435100


No 35 
>d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]}
Probab=47.43  E-value=6.5  Score=15.59  Aligned_cols=105  Identities=17%  Similarity=0.182  Sum_probs=61.8

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEECCCCCCC
Q ss_conf             89899899999999849999998439988899999999860038866542415688878999983322935527998771
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD  194 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~v~KiRINPGNi~~  194 (741)
                      .+.+..++++.+..+.|..-+.+-+-..++.+.+..|++.+   + ++.|..|.|-.+.+. .|. .+.  ++..-|+.-
T Consensus        15 ~~~e~~~~~~~~~~~~Gf~~~Kikvg~~~D~~~v~~ir~~~---~-~~~l~vDaN~~~~~~-~a~-~~~--~l~~~~~~w   86 (244)
T d1wufa1          15 QNVETLLQLVNQYVDQGYERVKLKIAPNKDIQFVEAVRKSF---P-KLSLMADANSAYNRE-DFL-LLK--ELDQYDLEM   86 (244)
T ss_dssp             SCHHHHHHHHHHHHHHTCCEEEEECBTTBSHHHHHHHHTTC---T-TSEEEEECTTCCCGG-GHH-HHH--TTGGGTCSE
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHC---C-CHHHHHHHHCCCCCH-HHH-HHH--CCCCCCHHH
T ss_conf             99999999999999779987999937717999999999855---4-143320100345411-234-320--101000244


Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             0000001334608999987768874999999999649909995115887
Q 004629          195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       195 ~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                          ||+-.-.+            .+..+-+.++..++||=.|-+.-++
T Consensus        87 ----iEeP~~~~------------d~~~~~~l~~~~~~pia~dE~~~~~  119 (244)
T d1wufa1          87 ----IEQPFGTK------------DFVDHAWLQKQLKTRICLDENIRSV  119 (244)
T ss_dssp             ----EECCSCSS------------CSHHHHHHHTTCSSEEEECTTCCSH
T ss_pred             ----HCCCCCCC------------CHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf             ----50752322------------3134312432100110257632100


No 36 
>d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]}
Probab=43.25  E-value=7.5  Score=15.17  Aligned_cols=136  Identities=18%  Similarity=0.299  Sum_probs=80.5

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEECCCCCCC
Q ss_conf             89899899999999849999998439988899999999860038866542415688878999983322935527998771
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD  194 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~v~KiRINPGNi~~  194 (741)
                      .|.+..++++....+.|..-+.+-+-...+.+.+..|++.+    .++.+..|.|-.+.+. .|.. +.  |..+-|+.-
T Consensus        15 ~~~~~~~~~~~~~~~~G~~~~Kikvg~~~D~~~v~~ir~~~----~d~~l~vDaN~~~~~~-~a~~-~~--~~~~~~i~~   86 (241)
T d1wuea1          15 EDLPQLLKQVQLAVEKGYQRVKLKIRPGYDVEPVALIRQHF----PNLPLMVDANSAYTLA-DLPQ-LQ--RLDHYQLAM   86 (241)
T ss_dssp             SCHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC----TTSCEEEECTTCCCGG-GHHH-HH--GGGGSCCSC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC----CCCCEEECCCCCCCHH-HHHH-HH--HHHHHHHHH
T ss_conf             99999999999999879998999748627999999999745----5201452245567777-7432-12--122101344


Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHHHHCC-C--CCH----HHHHHHHHH
Q ss_conf             000000133460899998776887499999999964990999511588767--7886509-9--916----899999999
Q 004629          195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD--RIMSYYG-D--SPR----GMVESAFEF  265 (741)
Q Consensus       195 ~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~--~il~~yg-~--tp~----~mVeSAle~  265 (741)
                          ||+-.-.            +.+..+-+..+..++||=.|-+..|+.+  +++..-. |  .+.    |=+..+++-
T Consensus        87 ----iEeP~~~------------~~~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~i  150 (241)
T d1wuea1          87 ----IEQPFAA------------DDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKI  150 (241)
T ss_dssp             ----EECCSCT------------TCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred             ----HCCCCCC------------CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf             ----4476321------------133566665203112223575445612555555555566512120125670799999


Q ss_pred             HHHHHHCCC
Q ss_conf             999997999
Q 004629          266 ARICRKLDF  274 (741)
Q Consensus       266 ~~i~e~~~F  274 (741)
                      +++|++.|-
T Consensus       151 ~~~a~~~~i  159 (241)
T d1wuea1         151 AAFCQENDL  159 (241)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHCCC
T ss_conf             999998699


No 37 
>d1r6wa1 c.1.11.2 (A:100-320) O-succinylbenzoate synthase {Escherichia coli [TaxId: 562]}
Probab=38.91  E-value=3.8  Score=17.20  Aligned_cols=134  Identities=15%  Similarity=0.173  Sum_probs=70.3

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECC--C-HHHHHHHHHHHHHHCCCCCCCCEEECC--CCCHHHHHHHHHHCCCEEECCC
Q ss_conf             9899899999999849999998439--9-888999999998600388665424156--8887899998332293552799
Q 004629          116 DVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAECFDKIRVNPG  190 (741)
Q Consensus       116 Dv~atv~Qi~~L~~aGceiVRvtvp--~-~~~A~al~~I~~~L~~~~~~iPLVADI--HF~~~~Al~a~~~v~KiRINPG  190 (741)
                      |.+..++++.++  .|...+.+-|-  + .++.+.+..+++.+   + ++.|..|-  -|++.-|+..++.++..  ++.
T Consensus        14 dpde~~~~~~~~--~G~~~~KiKvG~~~~~~D~~~i~~vr~~~---p-d~~L~vDaN~~w~~~~A~~~~~~l~~~--~~~   85 (221)
T d1r6wa1          14 DPDDLILKLADM--PGEKVAKVRVGLYEAVRDGMVVNLLLEAI---P-DLHLRLDANRAWTPLKGQQFAKYVNPD--YRD   85 (221)
T ss_dssp             CHHHHHHHHHTC--CSSEEEEEECSSSCHHHHHHHHHHHHHHC---T-TEEEEEECTTCBCHHHHHHHHHTSCTT--TGG
T ss_pred             CHHHHHHHHHHC--CCCCEEEEEECCCCHHHHHHHHHHHHHHC---C-CCEEEEECCCCCCHHHHHHHHHHHHHH--HCC
T ss_conf             999999999975--89986999658999799999999999978---9-974998689998999999999998886--458


Q ss_pred             CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCC-C--C--C--HHHHHHHH
Q ss_conf             87710000001334608999987768874999999999649909995115887677886509-9--9--1--68999999
Q 004629          191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-D--S--P--RGMVESAF  263 (741)
Q Consensus       191 Ni~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg-~--t--p--~~mVeSAl  263 (741)
                      +|--    +|+-....++              ..+.++..++||=.|-+.-+..+.+..... +  .  +  -|=+..++
T Consensus        86 ~ie~----~E~P~~~~~~--------------~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~d~v~ik~~~~GGit~~~  147 (221)
T d1r6wa1          86 RIAF----LEEPCKTRDD--------------SRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTGSLEKVR  147 (221)
T ss_dssp             GEEE----EECCBSSHHH--------------HHHHHHHHCCCEEESGGGGSTTCCCCCCTTEEEEEECHHHHCCHHHHH
T ss_pred             CEEE----ECCHHHHHHH--------------HHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHH
T ss_conf             8564----1011432568--------------888755066212101110035777888714768886140320199999


Q ss_pred             HHHHHHHHCCCC
Q ss_conf             999999979998
Q 004629          264 EFARICRKLDFH  275 (741)
Q Consensus       264 e~~~i~e~~~F~  275 (741)
                      +-+++|+.+|..
T Consensus       148 kia~~A~~~gl~  159 (221)
T d1r6wa1         148 EQVQAAHALGLT  159 (221)
T ss_dssp             HHHHHHHHTTCE
T ss_pred             HHHHHHHHCCCC
T ss_conf             999999982995


No 38 
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}
Probab=34.41  E-value=10  Score=14.25  Aligned_cols=45  Identities=13%  Similarity=0.070  Sum_probs=29.2

Q ss_pred             CCHHHHHHHHHHHHHHH-HCCCCCEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             91689999999999999-79998169998139966999999999997
Q 004629          254 SPRGMVESAFEFARICR-KLDFHNFLFSMKASNPVVMVQAYRLLVAE  299 (741)
Q Consensus       254 tp~~mVeSAle~~~i~e-~~~F~diviS~KaSnv~~~i~Ayrlla~~  299 (741)
                      |..|.+.++.+.++... +.++..-.|.+.-+- .+--.+-++|.+.
T Consensus        16 Tg~GV~~~~~~~~~~~~g~~~l~g~~v~IqG~G-nVG~~~a~~L~~~   61 (230)
T d1leha1          16 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLG-NVAKALCKKLNTE   61 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCS-HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-HHHHHHHHHHHHC
T ss_conf             188999999999998119999789999998988-8999999999987


No 39 
>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]}
Probab=33.43  E-value=11  Score=14.14  Aligned_cols=172  Identities=12%  Similarity=0.115  Sum_probs=85.6

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCHH--HHHHHHHHHHHHCCCCCCCCEEECC-------CCCH----HHHHHHHHHC
Q ss_conf             9899899999999849999998439988--8999999998600388665424156-------8887----8999983322
Q 004629          116 DVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADI-------HFAP----SVALRVAECF  182 (741)
Q Consensus       116 Dv~atv~Qi~~L~~aGceiVRvtvp~~~--~A~al~~I~~~L~~~~~~iPLVADI-------HF~~----~~Al~a~~~v  182 (741)
                      -++..+.|..+....+||+|-+-+--.+  +.+.+.++...++..-.++|++.-+       +|+.    ++.+  .+. 
T Consensus        13 ~~e~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~v~~~~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l--l~~-   89 (236)
T d1sfla_          13 SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNL--ISD-   89 (236)
T ss_dssp             ---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHH--HHH-
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCCHHHHHHH--HHH-
T ss_conf             27999999998507689889997043668797999999999986079984899981777799888998999999--999-


Q ss_pred             CCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHH
Q ss_conf             93552799877100000013346089999877688749999999996499099951158876778865099916899999
Q 004629          183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA  262 (741)
Q Consensus       183 ~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg~tp~~mVeSA  262 (741)
                       -+..++-++.|-+  |    +.+++        -++...++..++..++.+ |...|-         |..||.-  +-.
T Consensus        90 -~~~~~~~d~iDiE--~----~~~~~--------~~~~~~~~~~~~~~~~~v-I~S~H~---------f~~TP~~--~el  142 (236)
T d1sfla_          90 -LANINGIDMIDIE--W----QADID--------IEKHQRIITHLQQYNKEV-IISHHN---------FESTPPL--DEL  142 (236)
T ss_dssp             -GGGCTTCCEEEEE--C----CTTSC--------HHHHHHHHHHHHHTTCEE-EEEEEE---------SSCCCCH--HHH
T ss_pred             -HHHHCCCCHHHHH--H----CCHHH--------HHHHHHHHHHHHCCCCEE-EEEECC---------CCCCCCH--HHH
T ss_conf             -9984397646555--4----04255--------777899999865079889-998708---------9999899--999


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH---HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             999999997999816999813996699999999---9997610788756310124668999980244
Q 004629          263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRL---LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS  326 (741)
Q Consensus       263 le~~~i~e~~~F~diviS~KaSnv~~~i~Ayrl---la~~m~~~g~dyPLHLGVTEAG~~~~G~IKS  326 (741)
                      .+.++-+.+.|-+=+++-..+.+.....+..+.   +.+.     .+.|+=    ==++|+.|++--
T Consensus       143 ~~~~~~~~~~gaDivKia~~~~~~~D~~~ll~~~~~~~~~-----~~~pii----~~~MG~~G~~sR  200 (236)
T d1sfla_         143 QFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-----MDCKVV----GISMSKLGLISR  200 (236)
T ss_dssp             HHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHHHHH-----CSSEEE----EEECTGGGHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHC-----CCCCEE----EEECCCCCHHHH
T ss_conf             9999999982999079998269988999999999998645-----699889----995588656899


No 40 
>d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]}
Probab=33.29  E-value=11  Score=14.13  Aligned_cols=104  Identities=15%  Similarity=0.187  Sum_probs=65.5

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCC--CCHHHHHHHHHHCCCEEECCCC
Q ss_conf             88989989999999984999999843998889999999986003886654241568--8878999983322935527998
Q 004629          114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRVNPGN  191 (741)
Q Consensus       114 T~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIH--F~~~~Al~a~~~v~KiRINPGN  191 (741)
                      ..|.++.++++.++.+.|..-+.+-+-...+.+.+..|++.+   + ++.|..|.|  |+..-|+.. ..     +.+-|
T Consensus        14 ~~~~e~~~~~~~~~~~~G~~~~KiKvg~~~D~~~v~~ir~~~---~-d~~l~vD~n~~~~~~~a~~~-~~-----l~~~~   83 (243)
T d1r0ma1          14 QADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAF---P-DIRLTVDANSAYTLADAGRL-RQ-----LDEYD   83 (243)
T ss_dssp             CSSHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC---T-TSCEEEECTTCCCGGGHHHH-HT-----TGGGC
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC---C-CCEEEEECCCCCCHHHHHHH-HH-----HHHCC
T ss_conf             899999999999999869998999758622699999999745---6-96498725445765777776-54-----32123


Q ss_pred             CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             7710000001334608999987768874999999999649909995115887
Q 004629          192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL  243 (741)
Q Consensus       192 i~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL  243 (741)
                      +.-    +|+-.-            .+.+..+.+..+..++||=.|=+.-+.
T Consensus        84 ~~~----iEeP~~------------~~d~~~~~~l~~~~~ipia~gE~~~~~  119 (243)
T d1r0ma1          84 LTY----IEQPLA------------WDDLVDHAELARRIRTPLCLDESVASA  119 (243)
T ss_dssp             CSC----EECCSC------------TTCSHHHHHHHHHCSSCEEESTTCCSH
T ss_pred             CHH----HHHHCC------------CCCHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf             044----544201------------124477888730577540124201244


No 41 
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=32.89  E-value=11  Score=14.09  Aligned_cols=58  Identities=7%  Similarity=0.013  Sum_probs=30.1

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC----CCHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             488750589988989989999999984999999843----99888999999998600388665424
Q 004629          104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV----QGKREADACFEIKNSLVQKNYNIPLV  165 (741)
Q Consensus       104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv----p~~~~A~al~~I~~~L~~~~~~iPLV  165 (741)
                      .++-+|+. +..+++..++.+   +++|.+-|=+..    +...+.....++++.|.+.|..++-+
T Consensus         8 ~~~n~~~~-p~l~lee~l~~a---~~~G~dgiEl~~~~~~~~~~~~~~~~~~k~~l~~~gl~i~~l   69 (271)
T d2q02a1           8 FCINRKIA-PGLSIEAFFRLV---KRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTI   69 (271)
T ss_dssp             EEEEGGGC-TTSCHHHHHHHH---HHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHC-CCCCHHHHHHHH---HHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             76603121-799999999999---985999899963766432236677999999999839947874


No 42 
>d2zdra2 c.1.10.6 (A:2-281) Capsule biosynthesis protein SiaC, N-terminal domain {Neisseria meningitidis [TaxId: 487]}
Probab=32.87  E-value=11  Score=14.08  Aligned_cols=55  Identities=20%  Similarity=0.325  Sum_probs=48.2

Q ss_pred             CEEEEECEEECCCCC-CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCH
Q ss_conf             206997001028999-6488750589988989989999999984999999843998
Q 004629           88 TRTVMVGNVAIGSEH-PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK  142 (741)
Q Consensus        88 Tr~V~VG~v~IGG~~-PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtvp~~  142 (741)
                      .+.++||+..||.++ |..|--+.+..--|.+-..+-|.....+||+.|.+-.-..
T Consensus         3 ~~~~ki~~~~i~~~~~~~iIAEig~NH~Gd~~~a~~lI~~a~~sGadaVKfQ~~~~   58 (280)
T d2zdra2           3 NNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIV   58 (280)
T ss_dssp             CCEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCH
T ss_pred             CCEEEECCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             86589899892799984899982666477899999999999981999889667146


No 43 
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId: 56636]}
Probab=31.08  E-value=12  Score=13.89  Aligned_cols=80  Identities=13%  Similarity=0.084  Sum_probs=50.9

Q ss_pred             ECCCCCCEEEEECCCCCC----CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCH
Q ss_conf             028999648875058998----8989989999999984999999843998889999999986003886654241568887
Q 004629           97 AIGSEHPIRVQTMTTNDT----KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP  172 (741)
Q Consensus        97 ~IGG~~PI~VQSMt~t~T----~Dv~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~  172 (741)
                      ...+|.++++-+.-..-|    ....+-.+...++.+.||+++=+++.+.++..+..+-.+.....+.+.|+++|.+-.-
T Consensus        25 ~~~kGk~vVLff~P~dftpvCttEl~~~~~~~~ef~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~l~fpllsD~~~~v  104 (237)
T d2zcta1          25 YVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTV  104 (237)
T ss_dssp             HHTTTCEEEEEEESCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHCCCCCSCEEECGGGHH
T ss_pred             HHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             63499979999988878965878887787640210157841340037767888777666564034344466234832699


Q ss_pred             HHHH
Q ss_conf             8999
Q 004629          173 SVAL  176 (741)
Q Consensus       173 ~~Al  176 (741)
                      ..++
T Consensus       105 ak~y  108 (237)
T d2zcta1         105 ARRL  108 (237)
T ss_dssp             HHHT
T ss_pred             HHHC
T ss_conf             9985


No 44 
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=30.81  E-value=12  Score=13.86  Aligned_cols=42  Identities=17%  Similarity=0.340  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             8998999999998499999984399888999999998600388665424
Q 004629          117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLV  165 (741)
Q Consensus       117 v~atv~Qi~~L~~aGceiVRvtvp~~~~A~al~~I~~~L~~~~~~iPLV  165 (741)
                      ...-++.+++|+.+|||.+=+++++.-.  .+.+|.++     +++|++
T Consensus        60 ~~~l~~~~~~Le~~Ga~~i~i~cNT~H~--~~d~i~~~-----~~iP~l  101 (115)
T d1jfla1          60 RPQLIWTAKRLEECGADFIIMPCNTAHA--FVEDIRKA-----IKIPII  101 (115)
T ss_dssp             HHHHHHHHHHHHHHTCSEEECSCTGGGG--GHHHHHHH-----CSSCBC
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCHHHH--HHHHHHHH-----CCCCEE
T ss_conf             7999999999996699999976758999--99999987-----799886


No 45 
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE {Escherichia coli [TaxId: 562]}
Probab=29.62  E-value=7.3  Score=15.23  Aligned_cols=83  Identities=18%  Similarity=0.221  Sum_probs=46.0

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCEEEEECCCHHHHHHH
Q ss_conf             28888666435899999999984599992899861144399987888605543889506755365545535882379999
Q 004629          644 SCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDA  723 (741)
Q Consensus       644 SCPsCGRTlfDLq~~~~~Ik~~t~hLkgvkIAVMGCIVNGPGEmadAD~GyvGg~pgki~Ly~gke~V~~~Ipeeeavd~  723 (741)
                      -||-|.+..    .+..++.+..... .++++.+.|--|   ..--..||+-+ -| .+.+|++++.|.+ +....-.++
T Consensus        47 wCp~C~~~~----pvl~ela~~~~~~-~~~~a~Vd~d~~---~~la~~~~V~~-~P-T~~~~~~G~~v~~-~~G~~~~~~  115 (132)
T d2hfda1          47 RTPEVSDNP----VMIGELLREFPDY-TWQVAIADLEQS---EAIGDRFGVFR-FP-ATLVFTGGNYRGV-LNGIHPWAE  115 (132)
T ss_dssp             CCSSSSCCT----HHHHHHHTTCTTS-CEEEEEECHHHH---HHHHHHHTCCS-CC-EEEEEETTEEEEE-ECCCSCHHH
T ss_pred             CCHHHHHHH----HHHHHHHHHCCCC-CCEEEEEEECCC---HHHHHHHCCCC-CE-EEEEEECCCEEEE-ECCCCCHHH
T ss_conf             795378899----9999999875688-631699870679---89997626575-20-6999983747664-139999999


Q ss_pred             HHHHHHHCCCCCCCCCC
Q ss_conf             99999960666899999
Q 004629          724 LIQLIKDHGRWAEPPAE  740 (741)
Q Consensus       724 Li~lIk~~g~w~dp~~~  740 (741)
                      |++.|+   .+.+|+.+
T Consensus       116 l~~~i~---~ll~~~~e  129 (132)
T d2hfda1         116 LINLMR---GLVEPQQE  129 (132)
T ss_dssp             HHHHHH---HHHSCSSC
T ss_pred             HHHHHH---HHHCCCCC
T ss_conf             999999---98585101


No 46 
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=28.93  E-value=13  Score=13.64  Aligned_cols=15  Identities=40%  Similarity=0.589  Sum_probs=6.4

Q ss_pred             HHHHHHCCCCEEEEE
Q ss_conf             999998499999984
Q 004629          124 VMRIADQGADLVRIT  138 (741)
Q Consensus       124 i~~L~~aGceiVRvt  138 (741)
                      +..+.++|+++|=+-
T Consensus        75 i~~~~~~ga~~i~~H   89 (217)
T d2flia1          75 VEAFAQAGADIMTIH   89 (217)
T ss_dssp             HHHHHHHTCSEEEEE
T ss_pred             HHHHHHCCCCEEEEC
T ss_conf             999997099679950


No 47 
>d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]}
Probab=28.62  E-value=13  Score=13.61  Aligned_cols=67  Identities=12%  Similarity=0.309  Sum_probs=46.6

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECC--C-HHHHHHHHHHHHHHCCCCCCCCEEECCC--CCHHHHHHHHHHCCC
Q ss_conf             89899899999999849999998439--9-8889999999986003886654241568--887899998332293
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK  184 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtvp--~-~~~A~al~~I~~~L~~~~~~iPLVADIH--F~~~~Al~a~~~v~K  184 (741)
                      .+++..++++.++.+.|-.-+.+-+.  + .++.+.+..|++.+   |.+++|..|-|  |+..-|+..++.+++
T Consensus        20 ~~~~~~~~~~~~~~~~Gf~~~Kikvg~~~~~~di~~v~avr~~~---G~~~~l~vDan~~~~~~~A~~~~~~l~~   91 (256)
T d2gdqa1          20 QWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDANQSYDAAAAFKWERYFSE   91 (256)
T ss_dssp             THHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHTTHHHHTT
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf             78999999999999879998999799999999999999999973---9872886245557777889999999862


No 48 
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]}
Probab=28.55  E-value=13  Score=13.60  Aligned_cols=27  Identities=15%  Similarity=0.271  Sum_probs=11.7

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9964887505899889899899999999849
Q 004629          101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQG  131 (741)
Q Consensus       101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aG  131 (741)
                      .-||.+|-+.    .|.++.++|..+|.+-+
T Consensus        53 ~~~is~ev~~----~~~~~mi~~A~~l~~~~   79 (220)
T d1l6wa_          53 QGRLFAQVMA----TTAEGMVNDALKLRSII   79 (220)
T ss_dssp             CSEEEEECCC----SSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEEEEE----EHHHHHHHHHHHHHHHC
T ss_conf             7717767753----13434589999999723


No 49 
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=26.72  E-value=14  Score=13.39  Aligned_cols=73  Identities=11%  Similarity=0.143  Sum_probs=43.8

Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             99999999799981699981399669999999999976107887563101246689999802448999998542899635
Q 004629          263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI  342 (741)
Q Consensus       263 le~~~i~e~~~F~diviS~KaSnv~~~i~Ayrlla~~m~~~g~dyPLHLGVTEAG~~~~G~IKSaiGiG~LL~dGIGDTI  342 (741)
                      .+.+..+-+.|-+-+++..-...-.-+++..+.+.+..    .+-|+          .-|-|-+.-+--.|..-| -|-|
T Consensus       153 ~~ra~~L~~aG~D~ivID~AhG~s~~~~~~i~~ik~~~----~~v~v----------IaGNV~T~e~a~~L~~~G-aD~V  217 (388)
T d1eepa_         153 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKY----PNLDL----------IAGNIVTKEAALDLISVG-ADCL  217 (388)
T ss_dssp             HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC----TTCEE----------EEEEECSHHHHHHHHTTT-CSEE
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC----CCCCE----------EECCCCCHHHHHHHHHCC-CCEE
T ss_conf             99999877512545431036631677999999999878----99866----------500126799999998629-7755


Q ss_pred             EEECCCCC
Q ss_conf             78457887
Q 004629          343 RVSLTEPP  350 (741)
Q Consensus       343 RVSLT~dP  350 (741)
                      ||-.-.-.
T Consensus       218 kVGiGpGs  225 (388)
T d1eepa_         218 KVGIGPGS  225 (388)
T ss_dssp             EECSSCST
T ss_pred             EECCCCCC
T ss_conf             43122232


No 50 
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=24.75  E-value=15  Score=13.15  Aligned_cols=58  Identities=21%  Similarity=0.139  Sum_probs=26.7

Q ss_pred             HHHHHHHHHHCCCCEEEEECC---CHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             899999999849999998439---98889999999986003886654241568887899998332
Q 004629          120 TVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC  181 (741)
Q Consensus       120 tv~Qi~~L~~aGceiVRvtvp---~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~  181 (741)
                      ..+.+..|.++|+|++=+.+-   .......+++||+.    .-++|+||-===++..|+..+++
T Consensus       108 ~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~----~~~~~iIaGNV~T~e~a~~L~~a  168 (365)
T d1zfja1         108 TFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH----FPNRTLIAGNIATAEGARALYDA  168 (365)
T ss_dssp             HHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH----CSSSCEEEEEECSHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH----CCCCCEEECCCCCHHHHHHHHHC
T ss_conf             77899999986998899978865543214788999865----88764441134348999999866


No 51 
>d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]}
Probab=23.95  E-value=15  Score=13.04  Aligned_cols=67  Identities=10%  Similarity=0.148  Sum_probs=47.7

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEC-CC-HHHHHHHHHHHHHHCCCCCCCCEEECCCCC--HHHHHHHHHHCCC
Q ss_conf             8989989999999984999999843-99-888999999998600388665424156888--7899998332293
Q 004629          115 KDVAGTVEEVMRIADQGADLVRITV-QG-KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK  184 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVRvtv-p~-~~~A~al~~I~~~L~~~~~~iPLVADIHF~--~~~Al~a~~~v~K  184 (741)
                      .+.+..++++.++.+.|..-+.+-+ .+ .++.+.+..|++.+   |-.+.|..|.|-.  ..-|+..++.++.
T Consensus        14 ~s~ee~~~~a~~~~~~Gf~~~KikvG~~~~~di~~v~~vr~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~   84 (252)
T d1yeya1          14 YSDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAI---GPDIAMAVDANQRWDVGPAIDWMRQLAE   84 (252)
T ss_dssp             --CHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCCCHHHHHHHHHTTGG
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH---CCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf             9999999999999980999899989999899999999999985---8995174034567652778888776641


No 52 
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=22.65  E-value=16  Score=12.88  Aligned_cols=62  Identities=21%  Similarity=0.329  Sum_probs=26.2

Q ss_pred             HHHHHHHHHCCCCEEEEECC---CHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH-CCCEE
Q ss_conf             99999999849999998439---98889999999986003886654241568887899998332-29355
Q 004629          121 VEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIR  186 (741)
Q Consensus       121 v~Qi~~L~~aGceiVRvtvp---~~~~A~al~~I~~~L~~~~~~iPLVADIHF~~~~Al~a~~~-v~KiR  186 (741)
                      .+.+..+.++|++++=+.+-   .....+.++.+++.    .-++|+||--=-.++.|...+++ +|.||
T Consensus       100 ~e~~~~li~agvd~ivId~A~G~~~~~~~~ik~ik~~----~~~~~viaGnV~t~~~a~~l~~~GaD~v~  165 (330)
T d1vrda1         100 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD----YPDLPVVAGNVATPEGTEALIKAGADAVK  165 (330)
T ss_dssp             HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH----CTTSCEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH----CCCCCEEEECHHHHHHHHHHHHCCCCEEE
T ss_conf             9999999987998899946887733377999998875----89987895030689999999983899884


No 53 
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}
Probab=21.61  E-value=17  Score=12.74  Aligned_cols=130  Identities=18%  Similarity=0.125  Sum_probs=68.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEE-EECCC-HHHHHHHHHHHHHHCCCCCCCCEEECC--CCC----HHH--------HH--
Q ss_conf             8989989999999984999999-84399-888999999998600388665424156--888----789--------99--
Q 004629          115 KDVAGTVEEVMRIADQGADLVR-ITVQG-KREADACFEIKNSLVQKNYNIPLVADI--HFA----PSV--------AL--  176 (741)
Q Consensus       115 ~Dv~atv~Qi~~L~~aGceiVR-vtvp~-~~~A~al~~I~~~L~~~~~~iPLVADI--HF~----~~~--------Al--  176 (741)
                      .+.++..+++.++.++|.+-+- +|..+ .++.+.+.++.++     +++.+++-.  |-+    ..+        +-  
T Consensus        30 d~~~~~~~~l~~~~~~Gv~~iV~~t~~~~g~d~~~~~~la~~-----~~~~i~~~~G~hp~~~~p~~~~~~~~~~~~~~~  104 (291)
T d1bf6a_          30 DQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRE-----TGINVVACTGYYQDAFFPEHVATRSVQELAQEM  104 (291)
T ss_dssp             CCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHH-----HCCEEEEEECCCCGGGCCTHHHHSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH-----CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf             548889999999998599989974887552489999999997-----688856565435764577656868999999999


Q ss_pred             -HHHH-HCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCC
Q ss_conf             -9833-22935527998771000000133460899998776887499999999964990999511588767788650999
Q 004629          177 -RVAE-CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS  254 (741)
Q Consensus       177 -~a~~-~v~KiRINPGNi~~~~k~f~~~~Ytdeey~~ele~I~e~~~~vv~~ake~g~aIRIGvN~GSL~~~il~~yg~t  254 (741)
                       .-++ ..+.-.+.+|=||-.-    ...|...+.      -++.|+..++.|+++|.||=|-.-.+             
T Consensus       105 ~~~i~~~~~~~~~~~~~IGe~g----~d~~~~~~~------q~~~f~~~~~~A~~~~lPv~iH~r~~-------------  161 (291)
T d1bf6a_         105 VDEIEQGIDGTELKAGIIAEIG----TSEGKITPL------EEKVFIAAALAHNQTGRPISTHTSFS-------------  161 (291)
T ss_dssp             HHHHHTCSTTSSCCEEEEEEEE----CBTTBCCHH------HHHHHHHHHHHHHHHCCCEEEECGGG-------------
T ss_pred             HHHHHHHHHCCCCEEEEEEEEC----CCCCCCCHH------HHHHHHHHHHHHHHHCCCEEEECCCH-------------
T ss_conf             9999999733686689997503----215789788------99999999999999699769823621-------------


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             16899999999999997999816
Q 004629          255 PRGMVESAFEFARICRKLDFHNF  277 (741)
Q Consensus       255 p~~mVeSAle~~~i~e~~~F~di  277 (741)
                           ..+++.++++.+.+...-
T Consensus       162 -----~~~~e~~~~l~~~~~~~~  179 (291)
T d1bf6a_         162 -----TMGLEQLALLQAHGVDLS  179 (291)
T ss_dssp             -----CSHHHHHHHHHHTTCCGG
T ss_pred             -----HHHHHHHHHHHHHCCCCC
T ss_conf             -----230788999987177866


No 54 
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=20.26  E-value=18  Score=12.55  Aligned_cols=20  Identities=20%  Similarity=0.217  Sum_probs=9.7

Q ss_pred             CCCEEEEECCCCCCCCHHHH
Q ss_conf             99648875058998898998
Q 004629          101 EHPIRVQTMTTNDTKDVAGT  120 (741)
Q Consensus       101 ~~PI~VQSMt~t~T~Dv~at  120 (741)
                      +.||.---|-+.-+.+..+.
T Consensus        46 ~iPIIsApMdtVt~~~mA~a   65 (378)
T d1jr1a1          46 KTPLVSSPMDTVTEAGMAIA   65 (378)
T ss_dssp             SSCEEECCCTTTCSHHHHHH
T ss_pred             CCCEEECCCCCCCCHHHHHH
T ss_conf             99879799987388999999


Done!